| Year |
Citation |
Score |
| 2024 |
Chen X, Hu X, Li G, Grover CE, You J, Wang R, Liu Z, Qi Z, Luo X, Peng Y, Zhu M, Zhang Y, Lu S, Zhang YM, Lin Z, ... Wendel JF, et al. Genetic Regulatory Perturbation of Gene Expression Impacted by Genomic Introgression in Fiber Development of Allotetraploid Cotton. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). e2401549. PMID 39196795 DOI: 10.1002/advs.202401549 |
0.743 |
|
| 2024 |
Huang G, Bao Z, Feng L, Zhai J, Wendel JF, Cao X, Zhu Y. A telomere-to-telomere cotton genome assembly reveals centromere evolution and a Mutator transposon-linked module regulating embryo development. Nature Genetics. 56: 1953-1963. PMID 39147922 DOI: 10.1038/s41588-024-01877-6 |
0.403 |
|
| 2024 |
Conover JL, Grover CE, Sharbrough J, Sloan DB, Peterson DG, Wendel JF. Little evidence for homoeologous gene conversion and homoeologous exchange events in Gossypium allopolyploids. American Journal of Botany. 111: e16386. PMID 39107998 DOI: 10.1002/ajb2.16386 |
0.834 |
|
| 2024 |
Kayal E, Arick Ii MA, Hsu CY, Thrash A, Yorkston M, Morden CW, Wendel JF, Peterson DG, Grover CE. Genomic diversity and evolution in the Hawaiian Islands endemic Kokia (Malvaceae). G3 (Bethesda, Md.). PMID 39103179 DOI: 10.1093/g3journal/jkae180 |
0.719 |
|
| 2024 |
Ning W, Rogers KM, Hsu CY, Magbanua ZV, Pechanova O, Arick MA, Kayal E, Hu G, Peterson DG, Udall JA, Grover CE, Wendel JF. Origin and diversity of the wild cottons (Gossypium hirsutum) of Mound Key, Florida. Scientific Reports. 14: 14046. PMID 38890398 DOI: 10.1038/s41598-024-64887-8 |
0.815 |
|
| 2024 |
Hu G, Grover CE, Vera DL, Lung PY, Girimurugan SB, Miller ER, Conover JL, Ou S, Xiong X, Zhu D, Li D, Gallagher JP, Udall JA, Sui X, Zhang J, ... ... Wendel JF, et al. Evolutionary dynamics of chromatin structure and duplicate gene expression in diploid and allopolyploid cotton. Molecular Biology and Evolution. PMID 38758089 DOI: 10.1093/molbev/msae095 |
0.843 |
|
| 2024 |
Mo H, Chang H, Zhao G, Hu G, Luo X, Jia X, Xu Z, Ren G, Feng L, Wendel JF, Chen X, Ren M, Li F. iJAZ-based approach to engineer lepidopteran pest resistance in multiple crop species. Nature Plants. PMID 38684916 DOI: 10.1038/s41477-024-01682-3 |
0.551 |
|
| 2024 |
Shahbazi M, Majka J, Kubíková D, Zwierzykowski Z, Glombik M, Wendel JF, Sharbrough J, Hartmann S, Szecówka M, Doležel J, Bartoš J, Kopecký D, Kneřová J. Cytonuclear interplay in auto- and allopolyploids: a multifaceted perspective from the Festuca-Lolium complex. The Plant Journal : For Cell and Molecular Biology. PMID 38323852 DOI: 10.1111/tpj.16659 |
0.478 |
|
| 2024 |
Sloan DB, Conover JL, Grover CE, Wendel JF, Sharbrough J. Polyploid plants take cytonuclear perturbations in stride. The Plant Cell. PMID 38267606 DOI: 10.1093/plcell/koae021 |
0.87 |
|
| 2023 |
Long Y, Wendel JF, Zhang X, Wang M. Evolutionary insights into the organization of chromatin structure and landscape of transcriptional regulation in plants. Trends in Plant Science. PMID 38061928 DOI: 10.1016/j.tplants.2023.11.009 |
0.33 |
|
| 2023 |
You J, Liu Z, Qi Z, Ma Y, Sun M, Su L, Niu H, Peng Y, Luo X, Zhu M, Huang Y, Chang X, Hu X, Zhang Y, Pi R, ... ... Wendel JF, et al. Regulatory controls of duplicated gene expression during fiber development in allotetraploid cotton. Nature Genetics. PMID 37845354 DOI: 10.1038/s41588-023-01530-8 |
0.832 |
|
| 2023 |
Zhang K, Zhao X, Zhao Y, Zhang Z, Liu Z, Liu Z, Yu Y, Li J, Ma Y, Dong Y, Pang X, Jin X, Li N, Liu B, Wendel JF, et al. Cell type-specific cytonuclear coevolution in three allopolyploid plant species. Proceedings of the National Academy of Sciences of the United States of America. 120: e2310881120. PMID 37748065 DOI: 10.1073/pnas.2310881120 |
0.403 |
|
| 2023 |
Jareczek JJ, Grover CE, Hu G, Xiong X, Arick Ii MA, Peterson DG, Wendel JF. Domestication over Speciation in Allopolyploid Cotton Species: A Stronger Transcriptomic Pull. Genes. 14. PMID 37372480 DOI: 10.3390/genes14061301 |
0.779 |
|
| 2023 |
Li X, Wang J, Yu Y, Li G, Wang J, Li C, Zeng Z, Li N, Zhang Z, Dong Q, Yu Y, Wang X, Wang T, Grover CE, Wang B, ... ... Wendel JF, et al. Genomic rearrangements and evolutionary changes in 3D chromatin topologies in the cotton tribe (Gossypieae). Bmc Biology. 21: 56. PMID 36941615 DOI: 10.1186/s12915-023-01560-y |
0.698 |
|
| 2023 |
Jareczek JJ, Grover CE, Wendel JF. Cotton fiber as a model for understanding shifts in cell development under domestication. Frontiers in Plant Science. 14: 1146802. PMID 36938017 DOI: 10.3389/fpls.2023.1146802 |
0.644 |
|
| 2022 |
Grover CE, Arick MA, Thrash A, Sharbrough J, Hu G, Yuan D, Snodgrass S, Miller ER, Ramaraj T, Peterson DG, Udall JA, Wendel JF. Dual domestication, diversity, and differential introgression in Old World cotton diploids. Genome Biology and Evolution. PMID 36510772 DOI: 10.1093/gbe/evac170 |
0.824 |
|
| 2022 |
Wang M, Li J, Qi Z, Long Y, Pei L, Huang X, Grover CE, Du X, Xia C, Wang P, Liu Z, You J, Tian X, Ma Y, Wang R, ... ... Wendel JF, et al. Genomic innovation and regulatory rewiring during evolution of the cotton genus Gossypium. Nature Genetics. 54: 1959-1971. PMID 36474047 DOI: 10.1038/s41588-022-01237-2 |
0.764 |
|
| 2022 |
Ramaraj T, Grover CE, Mendoza AC, Arick MA, Jareczek JJ, Leach AG, Peterson DG, Wendel JF, Udall JA. The Gossypium herbaceum L. Wagad genome as a resource for understanding cotton domestication. G3 (Bethesda, Md.). PMID 36454094 DOI: 10.1093/g3journal/jkac308 |
0.875 |
|
| 2022 |
Zhang K, Li J, Li G, Zhao Y, Dong Y, Zhang Y, Sun W, Wang J, Yao J, Ma Y, Wang H, Zhang Z, Wang T, Xie K, Wendel JF, et al. Compensatory genetic and transcriptional cytonuclear coordination in allopolyploid lager yeast (Saccharomyces pastorianus). Molecular Biology and Evolution. PMID 36260528 DOI: 10.1093/molbev/msac228 |
0.45 |
|
| 2022 |
Peng R, Xu Y, Tian S, Unver T, Liu Z, Zhou Z, Cai X, Wang K, Wei Y, Liu Y, Wang H, Hu G, Zhang Z, Grover CE, Hou Y, ... ... Wendel JF, et al. Evolutionary divergence of duplicated genomes in newly described allotetraploid cottons. Proceedings of the National Academy of Sciences of the United States of America. 119: e2208496119. PMID 36122204 DOI: 10.1073/pnas.2208496119 |
0.877 |
|
| 2022 |
Hu L, Xu Z, Fan R, Wang G, Wang F, Qin X, Yan L, Ji X, Meng M, Sim S, Chen W, Hao C, Wang Q, Zhu H, Zhu S, ... ... Wendel JF, et al. The complex genome and adaptive evolution of polyploid Chinese pepper (Zanthoxylum armatum and Zanthoxylum bungeanum). Plant Biotechnology Journal. PMID 36117410 DOI: 10.1111/pbi.13926 |
0.497 |
|
| 2022 |
Li C, Ding B, Ma X, Yang X, Wang H, Dong Y, Zhang Z, Wang J, Li X, Yu Y, Yu Y, Liu B, Wendel JF, Li Y, Wang T, et al. A temporal gradient of cytonuclear coordination of chaperonins and chaperones during RuBisCo biogenesis in allopolyploid plants. Proceedings of the National Academy of Sciences of the United States of America. 119: e2200106119. PMID 35969751 DOI: 10.1073/pnas.2200106119 |
0.433 |
|
| 2022 |
Grover CE, Forsythe ES, Sharbrough J, Miller ER, Conover JL, DeTar RA, Chavarro C, Arick MA, Peterson DG, Leal-Bertioli SCM, Sloan DB, Wendel JF. Variation in cytonuclear expression accommodation among allopolyploid plants. Genetics. PMID 35951749 DOI: 10.1093/genetics/iyac118 |
0.83 |
|
| 2022 |
Forsythe ES, Grover CE, Miller ER, Conover JL, Arick MA, Chavarro MCF, Leal-Bertioli SCM, Peterson DG, Sharbrough J, Wendel JF, Sloan DB. Organellar transcripts dominate the cellular mRNA pool across plants of varying ploidy levels. Proceedings of the National Academy of Sciences of the United States of America. 119: e2204187119. PMID 35858449 DOI: 10.1073/pnas.2204187119 |
0.85 |
|
| 2022 |
Dong Y, Hu G, Grover CE, Miller ER, Zhu S, Wendel JF. Parental legacy versus regulatory innovation in salt stress responsiveness of allopolyploid cotton (Gossypium) species. The Plant Journal : For Cell and Molecular Biology. PMID 35686631 DOI: 10.1111/tpj.15863 |
0.785 |
|
| 2022 |
Wang ZH, Wang XF, Lu T, Li MR, Jiang P, Zhao J, Liu ST, Fu XQ, Wendel JF, Van de Peer Y, Liu B, Li LF. Reshuffling of the ancestral core-eudicot genome shaped chromatin topology and epigenetic modification in Panax. Nature Communications. 13: 1902. PMID 35393424 DOI: 10.1038/s41467-022-29561-5 |
0.522 |
|
| 2022 |
Sharbrough J, Conover JL, Fernandes Gyorfy M, Grover CE, Miller ER, Wendel JF, Sloan DB. Global Patterns of Subgenome Evolution in Organelle-Targeted Genes of Six Allotetraploid Angiosperms. Molecular Biology and Evolution. 39. PMID 35383845 DOI: 10.1093/molbev/msac074 |
0.862 |
|
| 2022 |
Zhao N, Wang W, Jiang K, Grover CE, Cheng C, Pan Z, Zhao C, Zhu J, Li D, Wang M, Xiao L, Yang J, Ning X, Li B, Xu H, ... ... Wendel JF, et al. A Calmodulin-Like Gene () for Fiber Strength and Yield Improvement Identified by Resequencing Core Accessions of a Pedigree in . Frontiers in Plant Science. 12: 815648. PMID 35185964 DOI: 10.3389/fpls.2021.815648 |
0.655 |
|
| 2022 |
Conover JL, Wendel JF. Deleterious Mutations Accumulate Faster in Allopolyploid Than Diploid Cotton (Gossypium) and Unequally between Subgenomes. Molecular Biology and Evolution. 39. PMID 35099532 DOI: 10.1093/molbev/msac024 |
0.76 |
|
| 2021 |
Zhao N, Wang W, Grover CE, Jiang K, Pan Z, Guo B, Zhu J, Su Y, Wang M, Nie H, Xiao L, Guo A, Yang J, Cheng C, Ning X, ... ... Wendel JF, et al. Genomic and GWAS analyses demonstrate phylogenomic relationships of Gossypium barbadense in China and selection for fiber length, lint percentage, and Fusarium wilt resistance. Plant Biotechnology Journal. PMID 34800075 DOI: 10.1111/pbi.13747 |
0.677 |
|
| 2021 |
Wu Y, Lin F, Zhou Y, Wang J, Sun S, Wang B, Zhang Z, Li G, Lin X, Wang X, Sun Y, Dong Q, Xu C, Gong L, Wendel JF, et al. Genomic mosaicism due to homoeologous exchange generates extensive phenotypic diversity in nascent allopolyploids. National Science Review. 8: nwaa277. PMID 34691642 DOI: 10.1093/nsr/nwaa277 |
0.513 |
|
| 2021 |
Grover CE, Yuan D, Arick MA, Miller ER, Hu G, Peterson DG, Wendel JF, Udall JA. The Gossypium anomalum genome as a resource for cotton improvement and evolutionary analysis of hybrid incompatibility. G3 (Bethesda, Md.). PMID 34549783 DOI: 10.1093/g3journal/jkab319 |
0.86 |
|
| 2021 |
Nie H, Wang Y, Wei C, Grover CE, Su Y, Wendel JF, Hua J. Embryogenic Calli Induction and Salt Stress Response Revealed by RNA-Seq in Diploid Wild Species and . Frontiers in Plant Science. 12: 715041. PMID 34512696 DOI: 10.3389/fpls.2021.715041 |
0.701 |
|
| 2021 |
Fernandes Gyorfy M, Miller ER, Conover JL, Grover CE, Wendel JF, Sloan DB, Sharbrough J. Nuclear-cytoplasmic balance: whole genome duplications induce elevated organellar genome copy number. The Plant Journal : For Cell and Molecular Biology. PMID 34309123 DOI: 10.1111/tpj.15436 |
0.864 |
|
| 2021 |
Glombik M, Copetti D, Bartos J, Stoces S, Zwierzykowski Z, Ruttink T, Wendel JF, Duchoslav M, Dolezel J, Studer B, Kopecky D. Reciprocal allopolyploid grasses (Festuca × Lolium) display stable patterns of genome dominance. The Plant Journal : For Cell and Molecular Biology. PMID 34152039 DOI: 10.1111/tpj.15375 |
0.505 |
|
| 2021 |
Yuan D, Grover CE, Hu G, Pan M, Miller ER, Conover JL, Hunt SP, Udall JA, Wendel JF. Parallel and Intertwining Threads of Domestication in Allopolyploid Cotton. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 8: 2003634. PMID 34026441 DOI: 10.1002/advs.202003634 |
0.851 |
|
| 2021 |
Conover JL, Sharbrough J, Wendel JF. pSONIC: Ploidy-aware Syntenic Orthologous Networks Identified via Collinearity. G3 (Bethesda, Md.). PMID 33983433 DOI: 10.1093/g3journal/jkab170 |
0.787 |
|
| 2021 |
Wang M, Li J, Wang P, Liu F, Liu Z, Zhao G, Xu Z, Pei L, Grover CE, Wendel JF, Wang K, Zhang X. Comparative genome analyses highlight transposon-mediated genome expansion and the evolutionary architecture of 3D genomic folding in cotton. Molecular Biology and Evolution. PMID 33973633 DOI: 10.1093/molbev/msab128 |
0.757 |
|
| 2021 |
Grover CE, Yuan D, Arick MA, Miller ER, Hu G, Peterson DG, Wendel JF, Udall JA. The Gossypium stocksii genome as a novel resource for cotton improvement. G3 (Bethesda, Md.). PMID 33871013 DOI: 10.1093/g3journal/jkab125 |
0.83 |
|
| 2020 |
Chen Z, Zhao J, Qiao J, Li W, Li J, Xu R, Wang H, Liu Z, Xing B, Wendel JF, Grover CE. Comparative analysis of codon usage between and mitochondrial genomes. Mitochondrial Dna. Part B, Resources. 5: 2500-2506. PMID 33457843 DOI: 10.1080/23802359.2020.1780969 |
0.753 |
|
| 2020 |
Mason AS, Wendel JF. Homoeologous Exchanges, Segmental Allopolyploidy, and Polyploid Genome Evolution. Frontiers in Genetics. 11: 1014. PMID 33005183 DOI: 10.3389/Fgene.2020.01014 |
0.537 |
|
| 2020 |
Nieto Feliner G, Casacuberta J, Wendel JF. Genomics of Evolutionary Novelty in Hybrids and Polyploids. Frontiers in Genetics. 11: 792. PMID 32849797 DOI: 10.3389/Fgene.2020.00792 |
0.6 |
|
| 2020 |
Cao JF, Huang JQ, Liu X, Huang CC, Zheng ZS, Zhang XF, Shangguan XX, Wang LJ, Zhang YG, Wendel JF, Grover CE, Chen ZW. Genome-wide characterization of the GRF family and their roles in response to salt stress in Gossypium. Bmc Genomics. 21: 575. PMID 32831017 DOI: 10.1186/S12864-020-06986-0 |
0.634 |
|
| 2020 |
Escudero M, Wendel JF. The grand sweep of chromosomal evolution in angiosperms. The New Phytologist. PMID 32772369 DOI: 10.1111/Nph.16802 |
0.307 |
|
| 2020 |
Li C, Wang X, Xiao Y, Sun X, Wang J, Yang X, Sun Y, Sha Y, Lv R, Yu Y, Ding B, Zhang Z, Li N, Wang T, Wendel JF, et al. Co-evolution in hybrid genomes: nuclear-encoded rubisco small subunits and their plastid-targeting translocons accompanying sequential allopolyploidy events in Triticum. Molecular Biology and Evolution. PMID 32602899 DOI: 10.1093/Molbev/Msaa158 |
0.521 |
|
| 2020 |
Gallagher JP, Grover CE, Hu G, Jareczek JJ, Wendel JF. Conservation and Divergence in Duplicated Fiber Coexpression Networks Accompanying Domestication of the Polyploid L. G3 (Bethesda, Md.). PMID 32586849 DOI: 10.1534/G3.120.401362 |
0.777 |
|
| 2020 |
Cao JF, Zhao B, Huang CC, Chen ZW, Zhao T, Liu HR, Hu GJ, Shangguan XX, Shan CM, Wang LJ, Zhang TZ, Wendel JF, Guan XY, Chen XY. The miR319-Targeted GhTCP4 Promotes the Transition from Cell Elongation to Wall Thickening in Cotton Fiber. Molecular Plant. PMID 32422188 DOI: 10.1016/J.Molp.2020.05.006 |
0.595 |
|
| 2020 |
Chen ZJ, Sreedasyam A, Ando A, Song Q, De Santiago LM, Hulse-Kemp AM, Ding M, Ye W, Kirkbride RC, Jenkins J, Plott C, Lovell J, Lin YM, Vaughn R, Liu B, ... ... Wendel JF, et al. Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement. Nature Genetics. PMID 32313247 DOI: 10.1038/S41588-020-0614-5 |
0.88 |
|
| 2020 |
Hu G, Grover CE, Arick MA, Liu M, Peterson DG, Wendel JF. Homoeologous gene expression and co-expression network analyses and evolutionary inference in allopolyploids. Briefings in Bioinformatics. PMID 32219306 DOI: 10.1093/Bib/Bbaa035 |
0.775 |
|
| 2020 |
Grover CE, Pan M, Yuan D, Arick MA, Hu G, Brase L, Stelly DM, Lu Z, Schmitz RJ, Peterson DG, Wendel JF, Udall JA. The Genome as a Resource for Cotton Breeding and Evolution. G3 (Bethesda, Md.). PMID 32122962 DOI: 10.1534/G3.120.401050 |
0.848 |
|
| 2020 |
Garcia S, Wendel JF, Borowska-Zuchowska N, Aïnouche M, Kuderova A, Kovarik A. The Utility of Graph Clustering of 5S Ribosomal DNA Homoeologs in Plant Allopolyploids, Homoploid Hybrids, and Cryptic Introgressants. Frontiers in Plant Science. 11: 41. PMID 32117380 DOI: 10.3389/Fpls.2020.00041 |
0.434 |
|
| 2019 |
Grover CE, Yoo MJ, Lin M, Murphy MD, Harker DB, Byers RL, Lipka AE, Hu G, Yuan D, Conover JL, Udall JA, Paterson AH, Gore MA, Wendel JF. Genetic Analysis of the Transition from Wild to Domesticated Cotton ( L.). G3 (Bethesda, Md.). PMID 31843806 DOI: 10.1534/G3.119.400909 |
0.82 |
|
| 2019 |
Udall JA, Long E, Ramaraj T, Conover JL, Yuan D, Grover CE, Gong L, Arick MA, Masonbrink RE, Peterson DG, Wendel JF. The Genome Sequence of Illustrates a Descending Dysploidy in Plants. Frontiers in Plant Science. 10: 1541. PMID 31827481 DOI: 10.3389/Fpls.2019.01541 |
0.845 |
|
| 2019 |
Bao Y, Hu G, Grover CE, Conover J, Yuan D, Wendel JF. Unraveling cis and trans regulatory evolution during cotton domestication. Nature Communications. 10: 5399. PMID 31776348 DOI: 10.1038/S41467-019-13386-W |
0.848 |
|
| 2019 |
Zhao N, Grover CE, Chen Z, Wendel JF, Hua J. Intergenomic gene transfer in diploid and allopolyploid Gossypium. Bmc Plant Biology. 19: 492. PMID 31718541 DOI: 10.1186/S12870-019-2041-2 |
0.782 |
|
| 2019 |
Karimi N, Grover CE, Gallagher JP, Wendel JF, Ané C, Baum DA. Reticulate evolution helps explain apparent homoplasy in floral biology and pollination in baobabs (Adansonia; Bombacoideae; Malvaceae). Systematic Biology. PMID 31693158 DOI: 10.1093/Sysbio/Syz073 |
0.679 |
|
| 2019 |
Dong Y, Hu G, Yu J, Thu SW, Grover CE, Zhu S, Wendel JF. Salt tolerance diversity in diploid and polyploid cotton (Gossypium) species. The Plant Journal : For Cell and Molecular Biology. PMID 31642116 DOI: 10.1111/Tpj.14580 |
0.831 |
|
| 2019 |
Hu L, Xu Z, Wang M, Fan R, Yuan D, Wu B, Wu H, Qin X, Yan L, Tan L, Sim S, Li W, Saski CA, Daniell H, Wendel JF, et al. The chromosome-scale reference genome of black pepper provides insight into piperine biosynthesis. Nature Communications. 10: 4702. PMID 31619678 DOI: 10.1038/S41467-019-12607-6 |
0.866 |
|
| 2019 |
Udall JA, Long E, Hanson C, Yuan D, Ramaraj T, Conover JL, Gong L, Arick MA, Grover CE, Peterson DG, Wendel JF. Genome Sequence Assemblies of and . G3 (Bethesda, Md.). PMID 31462444 DOI: 10.1534/G3.119.400392 |
0.847 |
|
| 2019 |
Li N, Xu C, Zhang A, Lv R, Meng X, Lin X, Gong L, Wendel JF, Liu B. DNA methylation repatterning accompanying hybridization, whole genome doubling and homoeolog exchange in nascent segmental rice allotetraploids. The New Phytologist. PMID 30919978 DOI: 10.1111/Nph.15820 |
0.544 |
|
| 2018 |
Grover CE, Arick Ii MA, Thrash A, Conover JL, Sanders WS, Peterson DG, Frelichowski JE, Scheffler JA, Scheffler BE, Wendel JF. Insights into the evolution of the New World diploid cottons (Gossypium, subgenus Houzingenia) based on genome sequencing. Genome Biology and Evolution. PMID 30476109 DOI: 10.1093/Gbe/Evy256 |
0.865 |
|
| 2018 |
Conover JL, Karimi N, Stenz N, Ané C, Grover CE, Skema C, Tate JA, Wolff K, Logan SA, Wendel JF, Baum DA. A Malvaceae mystery: A mallow maelstrom of genome multiplications and maybe misleading methods? Journal of Integrative Plant Biology. PMID 30474311 DOI: 10.1111/Jipb.12746 |
0.866 |
|
| 2018 |
Li C, Sun X, Conover JL, Zhang Z, Wang J, Wang X, Deng X, Wang H, Liu B, Wendel JF, Gong L. Cytonuclear coevolution following homoploid hybrid speciation in Aegilops tauschii. Molecular Biology and Evolution. PMID 30445640 DOI: 10.1093/Molbev/Msy215 |
0.851 |
|
| 2018 |
Hu G, Wendel JF. Cis-trans controls and regulatory novelty accompanying allopolyploidization. The New Phytologist. PMID 30290011 DOI: 10.1111/Nph.15515 |
0.727 |
|
| 2018 |
Zhao B, Cao JF, Hu GJ, Chen ZW, Wang LY, Shangguan XX, Wang LJ, Mao YB, Zhang TZ, Wendel JF, Chen XY. Core cis-element variation confers subgenome-biased expression of a transcription factor that functions in cotton fiber elongation. The New Phytologist. PMID 29465754 DOI: 10.1111/Nph.15063 |
0.638 |
|
| 2018 |
Wendel JF, Lisch D, Hu G, Mason AS. The long and short of doubling down: polyploidy, epigenetics, and the temporal dynamics of genome fractionation. Current Opinion in Genetics & Development. 49: 1-7. PMID 29438956 DOI: 10.1016/J.Gde.2018.01.004 |
0.752 |
|
| 2018 |
Bottani S, Zabet NR, Wendel JF, Veitia RA. Gene Expression Dominance in Allopolyploids: Hypotheses and Models. Trends in Plant Science. PMID 29433919 DOI: 10.1016/J.Tplants.2018.01.002 |
0.544 |
|
| 2018 |
WANG K, WENDEL JF, HUA J. Designations for individual genomes and chromosomes in Gossypium Journal of Cotton Research. 1. DOI: 10.1186/S42397-018-0002-1 |
0.321 |
|
| 2017 |
Sharbrough J, Conover JL, Tate JA, Wendel JF, Sloan DB. Cytonuclear responses to genome doubling. American Journal of Botany. 104: 1277-1280. PMID 29885242 DOI: 10.3732/Ajb.1700293 |
0.809 |
|
| 2017 |
Grover CE, Arick MA, Conover JL, Thrash A, Hu G, Sanders WS, Hsu CY, Naqvi RZ, Farooq M, Li X, Gong L, Mudge J, Ramaraj T, Udall JA, Peterson DG, ... Wendel JF, et al. Comparative Genomics of an Unusual Biogeographic Disjunction in the Cotton Tribe (Gossypieae) Yields Insights into Genome Downsizing. Genome Biology and Evolution. 9: 3328-3344. PMID 29194487 DOI: 10.1093/Gbe/Evx248 |
0.869 |
|
| 2017 |
Sun Y, Wu Y, Yang C, Sun S, Lin X, Liu L, Xu C, Wendel JF, Gong L, Liu B. Segmental allotetraploidy generates extensive homeologous expression rewiring and phenotypic diversity at the population level in rice. Molecular Ecology. PMID 28802080 DOI: 10.1111/Mec.14297 |
0.477 |
|
| 2017 |
Rousseau H, Rousseau-Gueutin M, Dauvergne X, Boutte J, Simon G, Marnet N, Bouchereau A, Guiheneuf S, Bazureau JP, Morice J, Ravanel S, Cabello-Hurtado F, Ainouche A, Salmon A, Wendel JF, et al. Evolution of DMSP (dimethylsulfoniopropionate) biosynthesis pathway: Origin and phylogenetic distribution in polyploid Spartina (Poaceae, Chloridoideae). Molecular Phylogenetics and Evolution. PMID 28694102 DOI: 10.1016/J.Ympev.2017.07.003 |
0.443 |
|
| 2017 |
Wang X, Zhang Z, Fu T, Hu L, Xu C, Gong L, Wendel JF, Liu B. Gene-body CG methylation and divergent expression of duplicate genes in rice. Scientific Reports. 7: 2675. PMID 28572585 DOI: 10.1038/S41598-017-02860-4 |
0.517 |
|
| 2017 |
Chen Z, Grover CE, Li P, Wang Y, Nie H, Zhao Y, Wang M, Liu F, Zhou Z, Wang X, Cai X, Wang K, Wendel JF, Hua J. Molecular evolution of the plastid genome during diversification of the cotton genus. Molecular Phylogenetics and Evolution. PMID 28414099 DOI: 10.1016/J.Ympev.2017.04.014 |
0.771 |
|
| 2017 |
Hinze LL, Hulse-Kemp AM, Wilson IW, Zhu QH, Llewellyn DJ, Taylor JM, Spriggs A, Fang DD, Ulloa M, Burke JJ, Giband M, Lacape JM, Van Deynze A, Udall JA, Scheffler JA, ... ... Wendel JF, et al. Diversity analysis of cotton (Gossypium hirsutum L.) germplasm using the CottonSNP63K Array. Bmc Plant Biology. 17: 37. PMID 28158969 DOI: 10.1186/S12870-017-0981-Y |
0.756 |
|
| 2017 |
Hu G, Hovav R, Grover CE, Faigenboim-Doron A, Kadmon N, Page JT, Udall JA, Wendel JF. Evolutionary Conservation and Divergence of Gene Coexpression Networks in Gossypium (Cotton) Seeds. Genome Biology and Evolution. PMID 28062755 DOI: 10.1093/Gbe/Evw280 |
0.834 |
|
| 2017 |
Snodgrass SJ, Jareczek J, Wendel JF. An examination of nucleotypic effects in diploid and polyploid cotton. Aob Plants. 9. PMID 28013252 DOI: 10.1093/Aobpla/Plw082 |
0.433 |
|
| 2017 |
Gallagher JP, Grover CE, Rex K, Moran M, Wendel JF. A New Species of Cotton from Wake Atoll, Gossypium stephensii (Malvaceae) Systematic Botany. 42: 115-123. DOI: 10.1600/036364417X694593 |
0.657 |
|
| 2017 |
Chen Z, Zhao N, Li S, Grover CE, Nie H, Wendel JF, Hua J. Plant Mitochondrial Genome Evolution and Cytoplasmic Male Sterility Critical Reviews in Plant Sciences. 36: 55-69. DOI: 10.1080/07352689.2017.1327762 |
0.715 |
|
| 2017 |
Grover CE, Gallagher JP, Szadkowski EP, Page JT, Gore MA, Udall JA, Wendel JF. Nucleotide diversity in the two co-resident genomes of allopolyploid cotton Plant Systematics and Evolution. 303: 1021-1042. DOI: 10.1007/S00606-017-1411-1 |
0.877 |
|
| 2016 |
Chen Z, Nie H, Grover CE, Wang Y, Li P, Wang M, Pei H, Zhao Y, Li S, Wendel JF, Hua J. Entire nucleotide sequences of Gossypium raimondii and G. arboreum mitochondrial genomes revealed A-genome species as cytoplasmic donor of the allotetraploid species. Plant Biology (Stuttgart, Germany). PMID 28008701 DOI: 10.1111/Plb.12536 |
0.746 |
|
| 2016 |
Han J, Masonbrink RE, Shan W, Song F, Zhang J, Yu W, Wang K, Wu Y, Tang H, Wendel JF, Wang K. Rapid proliferationand nucleolar organizer targeting centromeric retrotransposonsin cotton. The Plant Journal : For Cell and Molecular Biology. PMID 27539015 DOI: 10.1111/Tpj.13309 |
0.559 |
|
| 2016 |
Chen Z, Feng K, Grover CE, Li P, Liu F, Wang Y, Xu Q, Shang M, Zhou Z, Cai X, Wang X, Wendel JF, Wang K, Hua J. Chloroplast DNA Structural Variation, Phylogeny, and Age of Divergence among Diploid Cotton Species. Plos One. 11: e0157183. PMID 27309527 DOI: 10.1371/Journal.Pone.0157183 |
0.774 |
|
| 2016 |
Renny-Byfield S, Page JT, Udall JA, Sanders WS, Peterson DG, Arick MA, Grover CE, Wendel JF. Independent domestication of two Old World cotton species. Genome Biology and Evolution. PMID 27289095 DOI: 10.1093/Gbe/Evw129 |
0.838 |
|
| 2016 |
Gallagher JP, Grover CE, Hu G, Wendel JF. Insights into the Ecology and Evolution of Polyploid Plants through Network Analysis. Molecular Ecology. PMID 27027619 DOI: 10.1111/Mec.13626 |
0.804 |
|
| 2016 |
Wendel JF, Jackson SA, Meyers BC, Wing RA. Evolution of plant genome architecture. Genome Biology. 17: 37. PMID 26926526 DOI: 10.1186/S13059-016-0908-1 |
0.548 |
|
| 2016 |
Casacuberta JM, Jackson S, Panaud O, Purugganan M, Wendel J. Evolution of Plant Phenotypes, from Genomes to Traits. G3 (Bethesda, Md.). PMID 26869620 DOI: 10.1534/G3.115.025502 |
0.423 |
|
| 2015 |
Gong L, Masonbrink RE, Grover CE, Renny-Byfield S, Wendel JF. A Cluster of Recently Inserted Transposable Elements Associated with siRNAs in Gossypium raimondii. The Plant Genome. 8: eplantgenome2014.11.. PMID 33228305 DOI: 10.3835/plantgenome2014.11.0088 |
0.651 |
|
| 2015 |
Grover CE, Gallagher JP, Wendel JF. Candidate Gene Identification of Flowering Time Genes in Cotton. The Plant Genome. 8: eplantgenome2014.12.. PMID 33228302 DOI: 10.3835/plantgenome2014.12.0098 |
0.737 |
|
| 2015 |
Hovav R, Faigenboim-Doron A, Kadmon N, Hu G, Zhang X, Gallagher JP, Wendel JF. A Transcriptome Profile for Developing Seed of Polyploid Cotton. The Plant Genome. 8: eplantgenome2014.08.. PMID 33228286 DOI: 10.3835/plantgenome2014.08.0041 |
0.63 |
|
| 2015 |
Tang M, Chen Z, Grover CE, Wang Y, Li S, Liu G, Ma Z, Wendel JF, Hua J. Rapid evolutionary divergence of Gossypium barbadense and G. hirsutum mitochondrial genomes. Bmc Genomics. 16: 770. PMID 26459858 DOI: 10.1186/S12864-015-1988-0 |
0.759 |
|
| 2015 |
Grover CE, Gallagher JP, Jareczek JJ, Page JT, Udall JA, Gore MA, Wendel JF. Re-evaluating the phylogeny of allopolyploid Gossypium L. Molecular Phylogenetics and Evolution. 92: 45-52. PMID 26049043 DOI: 10.1016/J.Ympev.2015.05.023 |
0.829 |
|
| 2015 |
Paterson AH, Wendel JF. Unraveling the fabric of polyploidy. Nature Biotechnology. 33: 491-3. PMID 25965758 DOI: 10.1038/Nbt.3217 |
0.552 |
|
| 2015 |
Hu G, Koh J, Yoo MJ, Chen S, Wendel JF. Gene-expression novelty in allopolyploid cotton: a proteomic perspective. Genetics. 200: 91-104. PMID 25735302 DOI: 10.1534/Genetics.115.174367 |
0.711 |
|
| 2015 |
Renny-Byfield S, Gong L, Gallagher JP, Wendel JF. Persistence of subgenomes in paleopolyploid cotton after 60 my of evolution. Molecular Biology and Evolution. 32: 1063-71. PMID 25573906 DOI: 10.1093/Molbev/Msv001 |
0.583 |
|
| 2015 |
Grover CE, Gallagher JP, Wendel JF. Candidate gene identification of flowering time genes in cotton Plant Genome. 8. DOI: 10.3835/Plantgenome2014.12.0098 |
0.759 |
|
| 2015 |
Gong L, Masonbrink RE, Grover CE, Renny-Byfield S, Wendel JF. A cluster of recently inserted transposable elements associated with sirnas in gossypium raimondii Plant Genome. 8. DOI: 10.3835/Plantgenome2014.11.0088 |
0.682 |
|
| 2015 |
Hovav R, Faigenboim-Doron A, Kadmon N, Hu G, Zhang X, Gallagher JP, Wendel JF. A transcriptome profile for developing seed of polyploid cotton Plant Genome. 8. DOI: 10.3835/Plantgenome2014.08.0041 |
0.576 |
|
| 2015 |
Stewart JM, Craven LA, Brubaker C, Wendel JF. Gossypium anapoides (Malvaceae), a New Species from Western Australia Novon. 23: 448-451. DOI: 10.3417/2007140 |
0.368 |
|
| 2014 |
Masonbrink RE, Gallagher JP, Jareczek JJ, Renny-Byfield S, Grover CE, Gong L, Wendel JF. CenH3 evolution in diploids and polyploids of three angiosperm genera. Bmc Plant Biology. 14: 383. PMID 25547313 DOI: 10.1186/S12870-014-0383-3 |
0.684 |
|
| 2014 |
Shan CM, Shangguan XX, Zhao B, Zhang XF, Chao LM, Yang CQ, Wang LJ, Zhu HY, Zeng YD, Guo WZ, Zhou BL, Hu GJ, Guan XY, Chen ZJ, Wendel JF, et al. Control of cotton fibre elongation by a homeodomain transcription factor GhHOX3. Nature Communications. 5: 5519. PMID 25413731 DOI: 10.1038/Ncomms6519 |
0.612 |
|
| 2014 |
Hu G, Koh J, Yoo MJ, Pathak D, Chen S, Wendel JF. Proteomics profiling of fiber development and domestication in upland cotton (Gossypium hirsutum L.). Planta. 240: 1237-51. PMID 25156487 DOI: 10.1007/S00425-014-2146-7 |
0.632 |
|
| 2014 |
Renny-Byfield S, Wendel JF. Doubling down on genomes: polyploidy and crop plants. American Journal of Botany. 101: 1711-25. PMID 25090999 DOI: 10.3732/Ajb.1400119 |
0.62 |
|
| 2014 |
Gong L, Olson M, Wendel JF. Cytonuclear evolution of rubisco in four allopolyploid lineages. Molecular Biology and Evolution. 31: 2624-36. PMID 25015644 DOI: 10.1093/Molbev/Msu207 |
0.515 |
|
| 2014 |
Zhang H, Zhu B, Qi B, Gou X, Dong Y, Xu C, Zhang B, Huang W, Liu C, Wang X, Yang C, Zhou H, Kashkush K, Feldman M, Wendel JF, et al. Evolution of the BBAA component of bread wheat during its history at the allohexaploid level. The Plant Cell. 26: 2761-76. PMID 24989045 DOI: 10.1105/Tpc.114.128439 |
0.462 |
|
| 2014 |
Buggs RJ, Wendel JF, Doyle JJ, Soltis DE, Soltis PS, Coate JE. The legacy of diploid progenitors in allopolyploid gene expression patterns. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 369. PMID 24958927 DOI: 10.1098/Rstb.2013.0354 |
0.554 |
|
| 2014 |
Crawford DJ, Doyle JJ, Soltis DE, Soltis PS, Wendel JF. Contemporary and future studies in plant speciation, morphological/floral evolution and polyploidy: honouring the scientific contributions of Leslie D. Gottlieb to plant evolutionary biology. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 369. PMID 24958916 DOI: 10.1098/Rstb.2013.0341 |
0.34 |
|
| 2014 |
Xu C, Bai Y, Lin X, Zhao N, Hu L, Gong Z, Wendel JF, Liu B. Genome-wide disruption of gene expression in allopolyploids but not hybrids of rice subspecies. Molecular Biology and Evolution. 31: 1066-76. PMID 24577842 DOI: 10.1093/Molbev/Msu085 |
0.474 |
|
| 2014 |
Panaud O, Jackson SA, Wendel JF. Drivers and dynamics of diversity in plant genomes. The New Phytologist. 202: 15-8. PMID 24571694 DOI: 10.1111/Nph.12633 |
0.479 |
|
| 2014 |
Renny-Byfield S, Gallagher JP, Grover CE, Szadkowski E, Page JT, Udall JA, Wang X, Paterson AH, Wendel JF. Ancient gene duplicates in Gossypium (cotton) exhibit near-complete expression divergence. Genome Biology and Evolution. 6: 559-71. PMID 24558256 DOI: 10.1093/Gbe/Evu037 |
0.83 |
|
| 2014 |
Yoo MJ, Wendel JF. Comparative evolutionary and developmental dynamics of the cotton (Gossypium hirsutum) fiber transcriptome. Plos Genetics. 10: e1004073. PMID 24391525 DOI: 10.1371/Journal.Pgen.1004073 |
0.427 |
|
| 2014 |
Grover CE, Zhu X, Grupp KK, Jareczek JJ, Gallagher JP, Szadkowski E, Seijo JG, Wendel JF. Molecular confirmation of species status for the allopolyploid cotton species, Gossypium ekmanianum Wittmack Genetic Resources and Crop Evolution. 62: 103-114. DOI: 10.1007/S10722-014-0138-X |
0.679 |
|
| 2014 |
Ainouche ML, Wendel JF. Polyploid speciation and genome evolution: Lessons from recent allopolyploids Evolutionary Biology: Genome Evolution, Speciation, Coevolution and Origin of Life. 87-113. DOI: 10.1007/978-3-319-07623-2_5 |
0.494 |
|
| 2013 |
Gong L, Kakrana A, Arikit S, Meyers BC, Wendel JF. Composition and expression of conserved microRNA genes in diploid cotton (Gossypium) species. Genome Biology and Evolution. 5: 2449-59. PMID 24281048 DOI: 10.1093/Gbe/Evt196 |
0.44 |
|
| 2013 |
Page JT, Huynh MD, Liechty ZS, Grupp K, Stelly D, Hulse AM, Ashrafi H, Van Deynze A, Wendel JF, Udall JA. Insights into the evolution of cotton diploids and polyploids from whole-genome re-sequencing. G3 (Bethesda, Md.). 3: 1809-18. PMID 23979935 DOI: 10.1534/G3.113.007229 |
0.84 |
|
| 2013 |
Olsen KM, Wendel JF. Crop plants as models for understanding plant adaptation and diversification. Frontiers in Plant Science. 4: 290. PMID 23914199 DOI: 10.3389/Fpls.2013.00290 |
0.447 |
|
| 2013 |
Hu G, Koh J, Yoo MJ, Grupp K, Chen S, Wendel JF. Proteomic profiling of developing cotton fibers from wild and domesticated Gossypium barbadense. The New Phytologist. 200: 570-82. PMID 23795774 DOI: 10.1111/Nph.12381 |
0.654 |
|
| 2013 |
Madlung A, Wendel JF. Genetic and epigenetic aspects of polyploid evolution in plants Cytogenetic and Genome Research. 140: 270-285. PMID 23751292 DOI: 10.1159/000351430 |
0.577 |
|
| 2013 |
Olsen KM, Wendel JF. A bountiful harvest: genomic insights into crop domestication phenotypes. Annual Review of Plant Biology. 64: 47-70. PMID 23451788 DOI: 10.1146/Annurev-Arplant-050312-120048 |
0.554 |
|
| 2013 |
Yoo MJ, Szadkowski E, Wendel JF. Homoeolog expression bias and expression level dominance in allopolyploid cotton Heredity. 110: 171-180. PMID 23169565 DOI: 10.1038/hdy.2012.94 |
0.418 |
|
| 2012 |
Paterson AH, Wendel JF, Gundlach H, Guo H, Jenkins J, Jin D, Llewellyn D, Showmaker KC, Shu S, Udall J, Yoo MJ, Byers R, Chen W, Doron-Faigenboim A, Duke MV, et al. Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres. Nature. 492: 423-7. PMID 23257886 DOI: 10.1038/Nature11798 |
0.862 |
|
| 2012 |
Grover CE, Gallagher JP, Szadkowski EP, Yoo MJ, Flagel LE, Wendel JF. Homoeolog expression bias and expression level dominance in allopolyploids. The New Phytologist. 196: 966-71. PMID 23033870 DOI: 10.1111/J.1469-8137.2012.04365.X |
0.767 |
|
| 2012 |
Salmon A, Udall JA, Jeddeloh JA, Wendel J. Targeted capture of homoeologous coding and noncoding sequence in polyploid cotton. G3 (Bethesda, Md.). 2: 921-30. PMID 22908041 DOI: 10.1534/G3.112.003392 |
0.816 |
|
| 2012 |
Flagel LE, Wendel JF, Udall JA. Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton. Bmc Genomics. 13: 302. PMID 22768919 DOI: 10.1186/1471-2164-13-302 |
0.874 |
|
| 2012 |
Gong L, Salmon A, Yoo MJ, Grupp KK, Wang Z, Paterson AH, Wendel JF. The cytonuclear dimension of allopolyploid evolution: an example from cotton using rubisco. Molecular Biology and Evolution. 29: 3023-36. PMID 22490824 DOI: 10.1093/Molbev/Mss110 |
0.619 |
|
| 2012 |
Grover CE, Salmon A, Wendel JF. Targeted sequence capture as a powerful tool for evolutionary analysis. American Journal of Botany. 99: 312-9. PMID 22268225 DOI: 10.3732/Ajb.1100323 |
0.74 |
|
| 2012 |
Salmon A, Udall JA, Jeddeloh JA, Wendel J. Targeted capture of homoeologous coding and noncoding sequence in polyploid cotton G3: Genes, Genomes, Genetics. 2: 921-930. DOI: 10.1534/g3.112.003392 |
0.804 |
|
| 2012 |
Grover CE, Grupp KK, Wanzek RJ, Wendel JF. Assessing the monophyly of polyploid Gossypium species Plant Systematics and Evolution. 298: 1177-1183. DOI: 10.1007/S00606-012-0615-7 |
0.767 |
|
| 2012 |
Wendel JF, Greilhuber J, Leitch IJ, Doležel J. Plant genome diversity Plant Genome Diversity. 1: 1-279. DOI: 10.1007/978-3-7091-1130-7 |
0.406 |
|
| 2012 |
Wendel JF, Flagel LE, Adams KL. Jeans, genes, and genomes: Cotton as a model for studying polyploidy Polyploidy and Genome Evolution. 2147483647: 181-207. DOI: 10.1007/978-3-642-31442-1_10 |
0.78 |
|
| 2011 |
Bao Y, Hu G, Flagel LE, Salmon A, Bezanilla M, Paterson AH, Wang Z, Wendel JF. Parallel up-regulation of the profilin gene family following independent domestication of diploid and allopolyploid cotton (Gossypium). Proceedings of the National Academy of Sciences of the United States of America. 108: 21152-7. PMID 22160709 DOI: 10.1073/Pnas.1115926109 |
0.818 |
|
| 2011 |
Hu G, Houston NL, Pathak D, Schmidt L, Thelen JJ, Wendel JF. Genomically biased accumulation of seed storage proteins in allopolyploid cotton. Genetics. 189: 1103-15. PMID 21900265 DOI: 10.1534/Genetics.111.132407 |
0.745 |
|
| 2010 |
Rapp RA, Haigler CH, Flagel L, Hovav RH, Udall JA, Wendel JF. Gene expression in developing fibres of Upland cotton (Gossypium hirsutum L.) was massively altered by domestication. Bmc Biology. 8: 139. PMID 21078138 DOI: 10.1186/1741-7007-8-139 |
0.824 |
|
| 2010 |
Hu G, Hawkins JS, Grover CE, Wendel JF. The history and disposition of transposable elements in polyploid Gossypium. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 53: 599-607. PMID 20725147 DOI: 10.1139/g10-038 |
0.804 |
|
| 2010 |
Lin L, Pierce GJ, Bowers JE, Estill JC, Compton RO, Rainville LK, Kim C, Lemke C, Rong J, Tang H, Wang X, Braidotti M, Chen AH, Chicola K, Collura K, ... ... Wendel JF, et al. A draft physical map of a D-genome cotton species (Gossypium raimondii). Bmc Genomics. 11: 395. PMID 20569427 DOI: 10.1186/1471-2164-11-395 |
0.763 |
|
| 2010 |
Betancur L, Singh B, Rapp RA, Wendel JF, Marks MD, Roberts AW, Haigler CH. Phylogenetically distinct cellulose synthase genes support secondary wall thickening in arabidopsis shoot trichomes and cotton fiber. Journal of Integrative Plant Biology. 52: 205-20. PMID 20377682 DOI: 10.1111/J.1744-7909.2010.00934.X |
0.636 |
|
| 2010 |
Flagel LE, Wendel JF. Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation. The New Phytologist. 186: 184-93. PMID 20002320 DOI: 10.1111/J.1469-8137.2009.03107.X |
0.808 |
|
| 2010 |
Salmon A, Flagel L, Ying B, Udall JA, Wendel JF. Homoeologous nonreciprocal recombination in polyploid cotton. The New Phytologist. 186: 123-34. PMID 19925554 DOI: 10.1111/J.1469-8137.2009.03093.X |
0.873 |
|
| 2010 |
Bao Y, Wendel JF, Ge S. Multiple patterns of rDNA evolution following polyploidy in Oryza. Molecular Phylogenetics and Evolution. 55: 136-42. PMID 19857580 DOI: 10.1016/J.Ympev.2009.10.023 |
0.51 |
|
| 2010 |
Wendel JF. New World tetraploid cottons contain Old World cytoplasm. Proceedings of the National Academy of Sciences of the United States of America. 86: 4132-6. PMID 16594050 DOI: 10.1073/Pnas.86.11.4132 |
0.572 |
|
| 2010 |
Pleasants JM, Wendel JF. Reproductive and pollination biology of the endemic hawaiian cotton, gossypium tomentosum (malvaceae) Pacific Science. 64: 45-55. DOI: 10.2984/64.1.045 |
0.382 |
|
| 2010 |
Grover CE, Wendel JF. Recent Insights into Mechanisms of Genome Size Change in Plants Journal of Botany. 2010: 1-8. DOI: 10.1155/2010/382732 |
0.753 |
|
| 2010 |
Paterson AH, Rong Jk, Gingle AR, Chee PW, Dennis ES, Llewellyn D, Dure LS, Haigler C, Myers GO, Peterson DG, ur Rahman M, Zafar Y, Reddy U, Saranga Y, Stewart JM, ... ... Wendel JF, et al. Sequencing and utilization of the Gossypium genomes Tropical Plant Biology. 3: 71-74. DOI: 10.1007/S12042-010-9051-4 |
0.823 |
|
| 2009 |
Hawkins JS, Proulx SR, Rapp RA, Wendel JF. Rapid DNA loss as a counterbalance to genome expansion through retrotransposon proliferation in plants. Proceedings of the National Academy of Sciences of the United States of America. 106: 17811-6. PMID 19815511 DOI: 10.1073/Pnas.0904339106 |
0.715 |
|
| 2009 |
Chaudhary B, Hovav R, Flagel L, Mittler R, Wendel JF. Parallel expression evolution of oxidative stress-related genes in fiber from wild and domesticated diploid and polyploid cotton (Gossypium). Bmc Genomics. 10: 378. PMID 19686594 DOI: 10.1186/1471-2164-10-378 |
0.769 |
|
| 2009 |
Flagel LE, Wendel JF. Gene duplication and evolutionary novelty in plants. The New Phytologist. 183: 557-64. PMID 19555435 DOI: 10.1111/J.1469-8137.2009.02923.X |
0.761 |
|
| 2009 |
Rapp RA, Udall JA, Wendel JF. Genomic expression dominance in allopolyploids. Bmc Biology. 7: 18. PMID 19409075 DOI: 10.1186/1741-7007-7-18 |
0.852 |
|
| 2009 |
Chaudhary B, Flagel L, Stupar RM, Udall JA, Verma N, Springer NM, Wendel JF. Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium). Genetics. 182: 503-17. PMID 19363125 DOI: 10.1534/Genetics.109.102608 |
0.875 |
|
| 2009 |
Flagel LE, Chen L, Chaudhary B, Wendel JF. Coordinated and fine-scale control of homoeologous gene expression in allotetraploid cotton. The Journal of Heredity. 100: 487-90. PMID 19264969 DOI: 10.1093/Jhered/Esp003 |
0.764 |
|
| 2009 |
Butterworth KM, Adams DC, Horner HT, Wendel JF. Initiation and early development of fiber in wild and cultivated cotton International Journal of Plant Sciences. 170: 561-574. DOI: 10.1086/597817 |
0.37 |
|
| 2008 |
Flagel LE, Rapp RA, Grover CE, Widrlechner MP, Hawkins J, Grafenberg JL, Alvarez I, Chung GY, Wendel JF. Phylogenetic, morphological, and chemotaxonomic incongruence in the North American endemic genus Echinacea. American Journal of Botany. 95: 756-65. PMID 21632401 DOI: 10.3732/Ajb.0800049 |
0.82 |
|
| 2008 |
Doyle JJ, Flagel LE, Paterson AH, Rapp RA, Soltis DE, Soltis PS, Wendel JF. Evolutionary genetics of genome merger and doubling in plants. Annual Review of Genetics. 42: 443-61. PMID 18983261 DOI: 10.1146/Annurev.Genet.42.110807.091524 |
0.859 |
|
| 2008 |
Chaudhary B, Hovav R, Rapp R, Verma N, Udall JA, Wendel JF. Global analysis of gene expression in cotton fibers from wild and domesticated Gossypium barbadense. Evolution & Development. 10: 567-82. PMID 18803775 DOI: 10.1111/J.1525-142X.2008.00272.X |
0.828 |
|
| 2008 |
Grover CE, Hawkins JS, Wendel JF. Phylogenetic insights into the pace and pattern of plant genome size evolution. Genome Dynamics. 4: 57-68. PMID 18756077 DOI: 10.1159/000126006 |
0.74 |
|
| 2008 |
Hovav R, Chaudhary B, Udall JA, Flagel L, Wendel JF. Parallel domestication, convergent evolution and duplicated gene recruitment in allopolyploid cotton. Genetics. 179: 1725-33. PMID 18562666 DOI: 10.1534/Genetics.108.089656 |
0.862 |
|
| 2008 |
Hovav R, Udall JA, Chaudhary B, Rapp R, Flagel L, Wendel JF. Partitioned expression of duplicated genes during development and evolution of a single cell in a polyploid plant. Proceedings of the National Academy of Sciences of the United States of America. 105: 6191-5. PMID 18420816 DOI: 10.1073/Pnas.0711569105 |
0.855 |
|
| 2008 |
Flagel L, Udall J, Nettleton D, Wendel J. Duplicate gene expression in allopolyploid Gossypium reveals two temporally distinct phases of expression evolution. Bmc Biology. 6: 16. PMID 18416842 DOI: 10.1186/1741-7007-6-16 |
0.87 |
|
| 2008 |
Grover CE, Yu Y, Wing RA, Paterson AH, Wendel JF. A phylogenetic analysis of indel dynamics in the cotton genus. Molecular Biology and Evolution. 25: 1415-28. PMID 18400789 DOI: 10.1093/Molbev/Msn085 |
0.77 |
|
| 2008 |
Hawkins JS, Hu G, Rapp RA, Grafenberg JL, Wendel JF. Phylogenetic determination of the pace of transposable element proliferation in plants: copia and LINE-like elements in Gossypium. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 51: 11-8. PMID 18356935 DOI: 10.1139/g07-099 |
0.778 |
|
| 2008 |
Hovav R, Udall JA, Chaudhary B, Hovav E, Flagel L, Hu G, Wendel JF. The evolution of spinnable cotton fiber entailed prolonged development and a novel metabolism. Plos Genetics. 4: e25. PMID 18248099 DOI: 10.1371/Journal.Pgen.0040025 |
0.814 |
|
| 2008 |
Hovav R, Udall JA, Hovav E, Rapp R, Flagel L, Wendel JF. A majority of cotton genes are expressed in single-celled fiber. Planta. 227: 319-29. PMID 17849148 DOI: 10.1007/S00425-007-0619-7 |
0.834 |
|
| 2008 |
Hawkins JS, Grover CE, Wendel JF. Repeated big bangs and the expanding universe: Directionality in plant genome size evolution Plant Science. 174: 557-562. DOI: 10.1016/J.Plantsci.2008.03.015 |
0.752 |
|
| 2007 |
Percifield RJ, Hawkins JS, McCoy JA, Widrlechner MP, Wendel JF. Genetic diversity in Hypericum and AFLP Markers for species-specific identification of H. perforatum L. Planta Medica. 73: 1614-21. PMID 18072074 DOI: 10.1055/S-2007-993749 |
0.333 |
|
| 2007 |
Chen ZJ, Scheffler BE, Dennis E, Triplett BA, Zhang T, Guo W, Chen X, Stelly DM, Rabinowicz PD, Town CD, Arioli T, Brubaker C, Cantrell RG, Lacape JM, Ulloa M, ... ... Wendel JF, et al. Toward sequencing cotton (Gossypium) genomes. Plant Physiology. 145: 1303-10. PMID 18056866 DOI: 10.1104/Pp.107.107672 |
0.496 |
|
| 2007 |
Grover CE, Hawkins JS, Wendel JF. Tobacco genomes quickly go up in smoke. The New Phytologist. 175: 599-602. PMID 17688576 DOI: 10.1111/J.1469-8137.2007.02197.X |
0.652 |
|
| 2007 |
Rong J, Feltus FA, Waghmare VN, Pierce GJ, Chee PW, Draye X, Saranga Y, Wright RJ, Wilkins TA, May OL, Smith CW, Gannaway JR, Wendel JF, Paterson AH. Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicated in lint fiber development. Genetics. 176: 2577-88. PMID 17565937 DOI: 10.1534/Genetics.107.074518 |
0.425 |
|
| 2007 |
Grover CE, Kim H, Wing RA, Paterson AH, Wendel JF. Microcolinearity and genome evolution in the AdhA region of diploid and polyploid cotton (Gossypium). The Plant Journal : For Cell and Molecular Biology. 50: 995-1006. PMID 17461788 DOI: 10.1111/J.1365-313X.2007.03102.X |
0.77 |
|
| 2007 |
Udall JA, Flagel LE, Cheung F, Woodward AW, Hovav R, Rapp RA, Swanson JM, Lee JJ, Gingle AR, Nettleton D, Town CD, Chen ZJ, Wendel JF. Spotted cotton oligonucleotide microarrays for gene expression analysis. Bmc Genomics. 8: 81. PMID 17389046 DOI: 10.1186/1471-2164-8-81 |
0.833 |
|
| 2007 |
Fortune PM, Schierenbeck KA, Ainouche AK, Jacquemin J, Wendel JF, Ainouche ML. Evolutionary dynamics of Waxy and the origin of hexaploid Spartina species (Poaceae). Molecular Phylogenetics and Evolution. 43: 1040-55. PMID 17208463 DOI: 10.1016/J.Ympev.2006.11.018 |
0.498 |
|
| 2006 |
Senchina DS, Flagel LE, Wendel JF, Kohut ML. PHENETIC COMPARISON OF SEVEN Echinacea SPECIES BASED ON IMMUNOMODULATORY CHARACTERISTICS. Economic Botany. 60: 205-211. PMID 18301733 DOI: 10.1663/0013-0001(2006)60[205:Pcoses]2.0.Co;2 |
0.667 |
|
| 2006 |
Keyte AL, Percifield R, Liu B, Wendel JF. Infraspecific DNA methylation polymorphism in cotton (Gossypium hirsutum L.). The Journal of Heredity. 97: 444-50. PMID 16987937 DOI: 10.1093/Jhered/Esl023 |
0.355 |
|
| 2006 |
Hawkins JS, Kim H, Nason JD, Wing RA, Wendel JF. Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium. Genome Research. 16: 1252-61. PMID 16954538 DOI: 10.1101/Gr.5282906 |
0.58 |
|
| 2006 |
Udall JA, Swanson JM, Nettleton D, Percifield RJ, Wendel JF. A novel approach for characterizing expression levels of genes duplicated by polyploidy. Genetics. 173: 1823-7. PMID 16702424 DOI: 10.1534/Genetics.106.058271 |
0.809 |
|
| 2006 |
Alvarez I, Wendel JF. Cryptic interspecific introgression and genetic differentiation within Gossypium aridum (Malvaceae) and its relatives. Evolution; International Journal of Organic Evolution. 60: 505-17. PMID 16637496 DOI: 10.1111/J.0014-3820.2006.Tb01132.X |
0.451 |
|
| 2006 |
Udall JA, Swanson JM, Haller K, Rapp RA, Sparks ME, Hatfield J, Yu Y, Wu Y, Dowd C, Arpat AB, Sickler BA, Wilkins TA, Guo JY, Chen XY, Scheffler J, ... ... Wendel JF, et al. A global assembly of cotton ESTs. Genome Research. 16: 441-50. PMID 16478941 DOI: 10.1101/Gr.4602906 |
0.852 |
|
| 2006 |
Udall JA, Wendel JF. Polyploidy and crop improvement Crop Science. 46: S-3-S-14. DOI: 10.2135/Cropsci2006.07.0489Tpg |
0.841 |
|
| 2005 |
Rapp RA, Wendel JF. Epigenetics and plant evolution. The New Phytologist. 168: 81-91. PMID 16159323 DOI: 10.1111/J.1469-8137.2005.01491.X |
0.679 |
|
| 2005 |
Adams KL, Wendel JF. Allele-specific, bidirectional silencing of an alcohol dehydrogenase gene in different organs of interspecific diploid cotton hybrids. Genetics. 171: 2139-42. PMID 16143609 DOI: 10.1534/Genetics.105.047357 |
0.405 |
|
| 2005 |
Adams KL, Wendel JF. Novel patterns of gene expression in polyploid plants. Trends in Genetics : Tig. 21: 539-43. PMID 16098633 DOI: 10.1016/J.Tig.2005.07.009 |
0.505 |
|
| 2005 |
Rong J, Pierce GJ, Waghmare VN, Rogers CJ, Desai A, Chee PW, May OL, Gannaway JR, Wendel JF, Wilkins TA, Paterson AH. Genetic mapping and comparative analysis of seven mutants related to seed fiber development in cotton. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 111: 1137-46. PMID 16075204 DOI: 10.1007/S00122-005-0041-0 |
0.375 |
|
| 2005 |
Waghmare VN, Rong J, Rogers CJ, Pierce GJ, Wendel JF, Paterson AH. Genetic mapping of a cross between Gossypium hirsutum (cotton) and the Hawaiian endemic, Gossypium tomentosum. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 111: 665-76. PMID 16044266 DOI: 10.1007/S00122-005-2032-6 |
0.349 |
|
| 2005 |
Salmon A, Ainouche ML, Wendel JF. Genetic and epigenetic consequences of recent hybridization and polyploidy in Spartina (Poaceae). Molecular Ecology. 14: 1163-75. PMID 15773943 DOI: 10.1111/J.1365-294X.2005.02488.X |
0.471 |
|
| 2005 |
Adams KL, Wendel JF. Polyploidy and genome evolution in plants. Current Opinion in Plant Biology. 8: 135-41. PMID 15752992 DOI: 10.1016/J.Pbi.2005.01.001 |
0.572 |
|
| 2005 |
Hawkins JS, Pleasants J, Wendel JF. Identification of AFLP markers that discriminate between cultivated cotton and the Hawaiian Island endemic, Gossypium tomentosum Nuttall ex Seeman Genetic Resources and Crop Evolution. 52: 1069-1078. DOI: 10.1007/S10722-004-6115-Z |
0.411 |
|
| 2005 |
Rapp RA, Alvarez I, Wendel JF. Molecular confirmation of the position of Gossypium trifurcatum vollesen Genetic Resources and Crop Evolution. 52: 749-753. DOI: 10.1007/S10722-004-6097-X |
0.669 |
|
| 2005 |
Álvarez I, Cronn R, Wendel JF. Phylogeny of the New World diploid cottons (Gossypium L., Malvaceae) based on sequences of three low-copy nuclear genes Plant Systematics and Evolution. 252: 199-214. DOI: 10.1007/S00606-004-0294-0 |
0.445 |
|
| 2004 |
Rudgers JA, Strauss SY, Wendel JF. Trade-offs among anti-herbivore resistance traits: insights from Gossypieae (Malvaceae). American Journal of Botany. 91: 871-80. PMID 21653443 DOI: 10.3732/Ajb.91.6.871 |
0.328 |
|
| 2004 |
Adams KL, Percifield R, Wendel JF. Organ-specific silencing of duplicated genes in a newly synthesized cotton allotetraploid. Genetics. 168: 2217-26. PMID 15371349 DOI: 10.1534/Genetics.104.033522 |
0.552 |
|
| 2004 |
Grover CE, Kim H, Wing RA, Paterson AH, Wendel JF. Incongruent patterns of local and global genome size evolution in cotton. Genome Research. 14: 1474-82. PMID 15256507 DOI: 10.1101/Gr.2673204 |
0.776 |
|
| 2004 |
Rong J, Abbey C, Bowers JE, Brubaker CL, Chang C, Chee PW, Delmonte TA, Ding X, Garza JJ, Marler BS, Park CH, Pierce GJ, Rainey KM, Rastogi VK, Schulze SR, ... ... Wendel JF, et al. A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics. 166: 389-417. PMID 15020432 DOI: 10.1534/Genetics.166.1.389 |
0.529 |
|
| 2004 |
Cronn R, Wendel JF. Cryptic trysts, genomic mergers, and plant speciation New Phytologist. 161: 133-142. DOI: 10.1111/J.1469-8137.2004.00947.X |
0.478 |
|
| 2004 |
Adams KL, Wendel JF. Exploring the genomic mysteries of polyploidy in cotton Biological Journal of the Linnean Society. 82: 573-581. DOI: 10.1111/J.1095-8312.2004.00342.X |
0.599 |
|
| 2004 |
Small RL, Cronn RC, Wendel JF. Use of nuclear genes for phylogeny reconstruction in plants Australian Systematic Botany. 17: 145-170. DOI: 10.1071/Sb03015 |
0.781 |
|
| 2003 |
Schnabel A, McDonel PE, Wendel JF. Phylogenetic relationships in Gleditsia (Leguminosae) based on ITS sequences. American Journal of Botany. 90: 310-20. PMID 21659122 DOI: 10.3732/Ajb.90.2.310 |
0.422 |
|
| 2003 |
Cronn R, Small RL, Haselkorn T, Wendel JF. Cryptic repeated genomic recombination during speciation in Gossypium gossypioides. Evolution; International Journal of Organic Evolution. 57: 2475-89. PMID 14686525 DOI: 10.1111/J.0014-3820.2003.Tb01493.X |
0.801 |
|
| 2003 |
Álvarez I, Wendel JF. Ribosomal ITS sequences and plant phylogenetic inference Molecular Phylogenetics and Evolution. 29: 417-434. PMID 14615184 DOI: 10.1016/S1055-7903(03)00208-2 |
0.502 |
|
| 2003 |
Liu B, Wendel JF. Epigenetic phenomena and the evolution of plant allopolyploids. Molecular Phylogenetics and Evolution. 29: 365-79. PMID 14615180 DOI: 10.1016/S1055-7903(03)00213-6 |
0.499 |
|
| 2003 |
Senchina DS, Alvarez I, Cronn RC, Liu B, Rong J, Noyes RD, Paterson AH, Wing RA, Wilkins TA, Wendel JF. Rate variation among nuclear genes and the age of polyploidy in Gossypium. Molecular Biology and Evolution. 20: 633-43. PMID 12679546 DOI: 10.1093/Molbev/Msg065 |
0.474 |
|
| 2003 |
Adams KL, Cronn R, Percifield R, Wendel JF. Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing. Proceedings of the National Academy of Sciences of the United States of America. 100: 4649-54. PMID 12665616 DOI: 10.1073/Pnas.0630618100 |
0.476 |
|
| 2003 |
Cedroni ML, Cronn RC, Adams KL, Wilkins TA, Wendel JF. Evolution and expression of MYB genes in diploid and polyploid cotton. Plant Molecular Biology. 51: 313-25. PMID 12602863 DOI: 10.1023/A:1022051100610 |
0.469 |
|
| 2002 |
Cronn RC, Small RL, Haselkorn T, Wendel JF. Rapid diversification of the cotton genus (Gossypium: Malvaceae) revealed by analysis of sixteen nuclear and chloroplast genes. American Journal of Botany. 89: 707-25. PMID 21665671 DOI: 10.3732/Ajb.89.4.707 |
0.792 |
|
| 2002 |
Cronn R, Cedroni M, Haselkorn T, Grover C, Wendel JF. PCR-mediated recombination in amplification products derived from polyploid cotton. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 104: 482-489. PMID 12582722 DOI: 10.1007/S001220100741 |
0.724 |
|
| 2002 |
Wendel JF, Cronn RC, Alvarez I, Liu B, Small RL, Senchina DS. Intron size and genome size in plants. Molecular Biology and Evolution. 19: 2346-52. PMID 12446829 DOI: 10.1093/Oxfordjournals.Molbev.A004062 |
0.804 |
|
| 2002 |
Wendel JF, Cronn RC, Johnston JS, Price HJ. Feast and famine in plant genomes. Genetica. 115: 37-47. PMID 12188047 DOI: 10.1023/A:1016020030189 |
0.576 |
|
| 2002 |
Small RL, Wendel JF. Differential evolutionary dynamics of duplicated paralogous Adh loci in allotetraploid cotton (Gossypium). Molecular Biology and Evolution. 19: 597-607. PMID 11961094 DOI: 10.1093/Oxfordjournals.Molbev.A004119 |
0.782 |
|
| 2002 |
Liu B, Wendel JF. Non-mendelian phenomena in allopolyploid genome evolution Current Genomics. 3: 489-505. DOI: 10.2174/1389202023350255 |
0.574 |
|
| 2001 |
Liu B, Brubaker CL, Mergeai G, Cronn RC, Wendel JF. Polyploid formation in cotton is not accompanied by rapid genomic changes Genome. 44: 321-330. PMID 11444689 DOI: 10.1139/G01-011 |
0.556 |
|
| 2001 |
Applequist WL, Cronn R, Wendel JF. Comparative development of fiber in wild and cultivated cotton Evolution and Development. 3: 3-17. PMID 11256432 DOI: 10.1046/J.1525-142X.2001.00079.X |
0.409 |
|
| 2001 |
Liu B, Wendel JF. Intersimple sequence repeat (ISSR) polymorphisms as a genetic marker system in cotton Molecular Ecology Notes. 1: 205-208. DOI: 10.1046/J.1471-8278.2001.00073.X |
0.331 |
|
| 2001 |
Wendel JF, Cronn RC. Polyploidy and the evolutionary history of cotton Advances in Agronomy. 78: 139-186. DOI: 10.1016/S0065-2113(02)78004-8 |
0.606 |
|
| 2000 |
Liu B, Wendel JF. Retrotransposon activation followed by rapid repression in introgressed rice plants Genome. 43: 874-880. PMID 11081978 DOI: 10.1139/Gen-43-5-874 |
0.46 |
|
| 2000 |
Small RL, Wendel JF. Copy number lability and evolutionary dynamics of the Adh gene family in diploid and tetraploid cotton (Gossypium) Genetics. 155: 1913-1926. PMID 10924485 |
0.328 |
|
| 2000 |
Small RL, Wendel JF. Phylogeny, duplication, and intraspecific variation of Adh sequences in new world diploid cottons (Gossypium L., Malvaceae) Molecular Phylogenetics and Evolution. 16: 73-84. PMID 10877941 DOI: 10.1006/Mpev.1999.0750 |
0.807 |
|
| 2000 |
Wendel JF, Wessler SR. Retrotransposon-mediated genome evolution on a local ecological scale. Proceedings of the National Academy of Sciences of the United States of America. 97: 6250-2. PMID 10841529 DOI: 10.1073/Pnas.97.12.6250 |
0.494 |
|
| 2000 |
Pan Q, Wendel J, Fluhr R. Divergent evolution of plant NBS-LRR resistance gene homologues in dicot and cereal genomes Journal of Molecular Evolution. 50: 203-213. PMID 10754062 DOI: 10.1007/S002399910023 |
0.479 |
|
| 2000 |
Hanson RE, Islam-Faridi MN, Crane CF, Zwick MS, Czeschin DG, Wendel JF, McKnight TD, Price HJ, Stelly DM. Ty1-copia-retrotransposon behavior in a polyploid cotton Chromosome Research. 8: 73-76. PMID 10730591 DOI: 10.1023/A:1009239522541 |
0.519 |
|
| 2000 |
Wendel JF. Genome evolution in polyploids Plant Molecular Biology. 42: 225-249. PMID 10688139 DOI: 10.1023/A:1006392424384 |
0.596 |
|
| 1999 |
Cronn RC, Small RL, Wendel JF. Duplicated genes evolve independently after polyploid formation in cotton Proceedings of the National Academy of Sciences of the United States of America. 96: 14406-14411. PMID 10588718 DOI: 10.1073/Pnas.96.25.14406 |
0.844 |
|
| 1999 |
Small RL, Ryburn JA, Wendel JF. Low levels of nucleotide diversity at homoeologous Adh loci in allotetraploid cotton (Gossypium L.) Molecular Biology and Evolution. 16: 491-501. PMID 10331275 DOI: 10.1093/Oxfordjournals.Molbev.A026131 |
0.785 |
|
| 1999 |
Small RL, Wendel JF. The mitochondrial genome of allotetraploid cotton (Gossypium L.) Journal of Heredity. 90: 251-253. PMID 9987935 DOI: 10.1093/jhered/90.1.251 |
0.789 |
|
| 1999 |
Seelanan T, Brubaker CL, Stewart JM, Craven LA, Wendel JF. Molecular systematics of Australian Gossypium section Grandicalyx (Malvaceae) Systematic Botany. 24: 183-208. DOI: 10.2307/2419548 |
0.431 |
|
| 1999 |
Brubaker CL, Paterson AH, Wendel JF. Comparative genetic mapping of allotetraploid cotton and its diploid progenitors Genome. 42: 184-203. DOI: 10.1139/G98-118 |
0.566 |
|
| 1999 |
Huang L, Millet E, Rong J, Wendel JF, Anikster Y, Feldman M. Restriction fragment length polymorphism in wild and cultivated tetraploid wheat Israel Journal of Plant Sciences. 47: 213-224. DOI: 10.1080/07929978.1999.10676776 |
0.379 |
|
| 1998 |
Davis JI, Simmons MP, Stevenson DW, Wendel JF. Data decisiveness, data quality, and incongruence in phylogenetic analysis: an example from the monocotyledons using mitochondrial atp A sequences. Systematic Biology. 47: 282-310. PMID 12064229 DOI: 10.1080/106351598260923 |
0.376 |
|
| 1998 |
Baum DA, Small RL, Wendel JF. Biogeography and floral evolution of baobabs (Adansonia, Bombacaceae) as inferred from multiple data sets. Systematic Biology. 47: 181-207. PMID 12064226 DOI: 10.1080/106351598260879 |
0.748 |
|
| 1998 |
Zhao XP, Si Y, Hanson RE, Crane CF, Price HJ, Stelly DM, Wendel JF, Paterson AH. Dispersed repetitive DNA has spread to new genomes since polyploid formation in cotton Genome Research. 8: 479-492. PMID 9582192 DOI: 10.1101/Gr.8.5.479 |
0.564 |
|
| 1998 |
Small RL, Ryburn JA, Cronn RC, Seelanan T, Wendel JF. The tortoise and the hare: Choosing between noncoding plastome and nuclear Adh sequences for phylogeny reconstruction in a recently diverged plant group American Journal of Botany. 85: 1301-1315. DOI: 10.2307/2446640 |
0.78 |
|
| 1998 |
Schnabel A, Wendel JF. Cladistic biogeography of Gleditsia (Leguminosae) based on ndhF and rpl16 chloroplast gene sequences American Journal of Botany. 85: 1753-1765. DOI: 10.2307/2446510 |
0.408 |
|
| 1998 |
Cronn R, Wendel JF. Simple methods for isolating homoeologous loci from allopolyploid genomes Genome. 41: 756-762. DOI: 10.1139/G98-078 |
0.507 |
|
| 1997 |
Zhang W, Wendel JF, Clark LG. Bamboozled Again! Inadvertent Isolation of Fungal rDNA Sequences from Bamboos (Poaceae: Bambusoideae) Molecular Phylogenetics and Evolution. 8: 205-217. PMID 9299225 DOI: 10.1006/Mpev.1997.0422 |
0.356 |
|
| 1997 |
Seelanan T, Schnabel A, Wendel JF. Congruence and consensus in the cotton tribe (Malvaceae) Systematic Botany. 22: 259-290. DOI: 10.2307/2419457 |
0.507 |
|
| 1997 |
Paterson AH, Lan TH, Reischmann KP, Chang C, Lin YR, Liu S.- C, Burow MD, Kowalski SP, Katsar CS, DelMonte TA, Feldmann KA, Schertz KF, Wendel JF. Erattum: Toward a unified genetic map of higher plants, transcending the monocot-dicot divergence (Nature Genetics (1996) 14 (380-382)) Nature Genetics. 15: 322. DOI: 10.1038/Ng0397-322 |
0.329 |
|
| 1997 |
Cronn R, Brothers M, Klier K, Bretting PK, Wendel JF. Allozyme variation in domesticated annual sunflower and its wild relatives Theoretical and Applied Genetics. 95: 532-545. DOI: 10.1007/S001220050594 |
0.341 |
|
| 1996 |
Paterson AH, Lan TH, Reischmann KP, Chang C, Lin YR, Liu S.- C, Burow MD, Kowalski SP, Katsar CS, DelMonte TA, Feldmann KA, Schertz KF, Wendel JF. Toward a unified genetic map of higher plants, transcending the monocot- dicot divergence Nature Genetics. 14: 380-382. PMID 8944014 DOI: 10.1038/Ng1296-380 |
0.326 |
|
| 1996 |
Kelchner SA, Wendel JF. Hairpins create minute inversions in non coding regions of chloroplast DNA Current Genetics. 30: 259-262. PMID 8753656 DOI: 10.1007/S002940050130 |
0.45 |
|
| 1996 |
Cronn RC, Zhao X, Paterson AH, Wendel JF. Polymorphism and concerted evolution in a tandemly repeated gene family: 5S ribosomal DNA in diploid and allopolyploid cottons Journal of Molecular Evolution. 42: 685-705. PMID 8662014 DOI: 10.1007/Bf02338802 |
0.416 |
|
| 1995 |
Wendel JF, Schnabel A, Seelanan T. An Unusual Ribosomal DNA Sequence from Gossypium gossypioides Reveals Ancient, Cryptic, Intergenomic Introgression Molecular Phylogenetics and Evolution. 4: 298-313. PMID 8845966 DOI: 10.1006/Mpev.1995.1027 |
0.573 |
|
| 1995 |
Wendel JF, Schnabel A, Seelanan T. Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium) Proceedings of the National Academy of Sciences of the United States of America. 92: 280-284. PMID 7816833 DOI: 10.1073/Pnas.92.1.280 |
0.588 |
|
| 1995 |
Clark LG, Zhang Weiping, Wendel JF. A phylogeny of the grass family (Poaceae) based on ndhF sequence data Systematic Botany. 20: 436-460. DOI: 10.2307/2419803 |
0.352 |
|
| 1995 |
Altenbach S, Anderson O, Bigwood D, Cantinhour S, Coe E, Datko A, Heller S, Kaleikau E, McCouch S, Kohel R, Miksche J, Moore P, Neale D, Osborne T, Paterson A, ... ... Wendel JF, et al. USDA Plant Genome Research Program Advances in Agronomy. 55: 113-166. DOI: 10.1016/S0065-2113(08)60539-8 |
0.411 |
|
| 1995 |
Wang Rong-Lin, Wendel JF, Dekker JH. Weedy adaptation in Setaria spp. I. Isozyme analysis of genetic diversity and population genetic structure in Setaria viridis American Journal of Botany. 82: 308-317. DOI: 10.1002/J.1537-2197.1995.Tb12635.X |
0.303 |
|
| 1994 |
Stanton MA, Stewart JM, Percival AE, Wendel JF. Morphological diversity and relationships in the A-genome cottons, Gossypium arboreum and G.herbaceum Crop Science. 34: 519-527. DOI: 10.2135/Cropsci1994.0011183X003400020039X |
0.5 |
|
| 1994 |
Wendel JF, Rowley R, Stewart JM. Genetic diversity in and phylogenetic relationships of the Brazilian endemic cotton, Gossypium mustelinum (Malvaceae) Plant Systematics and Evolution. 192: 49-59. DOI: 10.1007/Bf00985907 |
0.39 |
|
| 1993 |
VanderWiel PL, Voytas DF, Wendel JF. Copia-like retrotransposable element evolution in diploid and polyploid cotton (Gossypium L.) Journal of Molecular Evolution. 36: 429-447. PMID 7685393 DOI: 10.1007/Bf02406720 |
0.436 |
|
| 1993 |
Paterson AH, Brubaker CL, Wendel JF. A rapid method for extraction of cotton (Gossypium spp.) genomic DNA suitable for RFLP or PCR analysis Plant Molecular Biology Reporter. 11: 122-127. DOI: 10.1007/Bf02670470 |
0.428 |
|
| 1993 |
Brubaker CL, Wendel JF. On the specific status of Gossypium lanceolatum Todaro Genetic Resources and Crop Evolution. 40: 165-170. DOI: 10.1007/Bf00051121 |
0.308 |
|
| 1992 |
Wendel JF, Albert VA. Phylogenetics of the Cotton Genus (Gossypium): Character-State Weighted Parsimony Analysis of Chloroplast-DNA Restriction Site Data and Its Systematic and Biogeographic Implications Systematic Botany. 17: 115-143. DOI: 10.2307/2419069 |
0.558 |
|
| 1992 |
DeJoode DR, Wendel JF. Genetic diversity and origin of the Hawaiian Islands cotton, Gossypium tomentosum American Journal of Botany. 79: 1311-1319. DOI: 10.1002/J.1537-2197.1992.Tb13735.X |
0.329 |
|
| 1992 |
Wendel JF, Brubaker CL, Percival AE. GENETIC DIVERSITY IN GOSSYPIUM HIRSUTUM AND THE ORIGIN OF UPLAND COTTON American Journal of Botany. 79: 1291-1310. DOI: 10.1002/J.1537-2197.1992.Tb13734.X |
0.419 |
|
| 1991 |
Wendel JF, Stewart JM, Rettig JH. MOLECULAR EVIDENCE FOR HOMOPLOID RETICULATE EVOLUTION AMONG AUSTRALIAN SPECIES OF GOSSYPIUM. Evolution; International Journal of Organic Evolution. 45: 694-711. PMID 28568839 DOI: 10.1111/J.1558-5646.1991.Tb04339.X |
0.432 |
|
| 1990 |
Percy RG, Wendel JF. Allozyme evidence for the origin and diversification of Gossypium barbadense L. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 79: 529-42. PMID 24226459 DOI: 10.1007/Bf00226164 |
0.388 |
|
| 1990 |
Doebley J, Stec A, Wendel J, Edwards M. Genetic and morphological analysis of a maize-teosinte F2 population: implications for the origin of maize. Proceedings of the National Academy of Sciences of the United States of America. 87: 9888-9892. PMID 11607138 DOI: 10.1073/Pnas.87.24.9888 |
0.375 |
|
| 1990 |
Wendel JF, Percy RG. Allozyme diversity and introgression in the Galapagos Islands endemic Gossypium darwinii and its relationship to continental G. barbadense Biochemical Systematics and Ecology. 18: 517-528. DOI: 10.1016/0305-1978(90)90123-W |
0.331 |
|
| 1990 |
Wendel JF, Percival AE. Molecular divergence in the Galapagos Islands-Baja California species pair, Gossypium klotzschianum and G. davidsonii (Malvaceae) Plant Systematics and Evolution. 171: 99-115. DOI: 10.1007/Bf00940598 |
0.438 |
|
| 1990 |
Parks CR, Wendel JF. MOLECULAR DIVERGENCE BETWEEN ASIAN AND NORTH AMERICAN SPECIES OF LIRIODENDRON (MAGNOLIACEAE) WITH IMPLICATIONS FOR INTERPRETATION OF FOSSIL FLORAS American Journal of Botany. 77: 1243-1256. DOI: 10.1002/J.1537-2197.1990.Tb11376.X |
0.453 |
|
| 1989 |
Wendel JF, Stuber CW, Goodman MM, Beckett JB. Duplicated plastid and triplicated cytosolic isozymes of triosephosphate isomerase in maize (Zea Mays L.) Journal of Heredity. 80: 218-228. PMID 2732453 DOI: 10.1093/Oxfordjournals.Jhered.A110839 |
0.432 |
|
| 1989 |
Pleasants JM, Wendel JF. GENETIC DIVERSITY IN A CLONAL NARROW ENDEMIC, ERYTHRONIUM PROPULLANS, AND IN ITS WIDESPREAD PROGENITOR, ERYTHRONIUM ALBIDUM American Journal of Botany. 76: 1136-1151. DOI: 10.1002/J.1537-2197.1989.Tb15098.X |
0.306 |
|
| 1988 |
Wendel JF, Goodman MM, Stuber CW, Beckett JB. New isozyme systems for maize (Zea mays L.): Aconitate hydratase, adenylate kinase, NADH dehydrogenase, and shikimate dehydrogenase Biochemical Genetics. 26: 421-445. PMID 2850791 DOI: 10.1007/Bf02401795 |
0.36 |
|
| 1987 |
Edwards MD, Stuber CW, Wendel JF. Molecular-marker-facilitated investigations of quantitative-trait loci in maize. I. Numbers, genomic distribution and types of gene action Genetics. 116: 113-125. PMID 3596228 DOI: 10.1093/genetics/116.1.113 |
0.35 |
|
| 1987 |
Wendel JF, Edwards MD, Stuber CW. Evidence for multilocus genetic control of preferential fertilisation in maize Heredity. 58: Pt 2/-. PMID 3471740 DOI: 10.1038/Hdy.1987.44 |
0.358 |
|
| 1987 |
Stuber CW, Edwards MD, Wendel JF. Molecular Marker‐Facilitated Investigations of Quantitative Trait Loci in Maize. II. Factors Influencing Yield and its Component Traits
1 Crop Science. 27: 639-648. DOI: 10.2135/Cropsci1987.0011183X002700040006X |
0.437 |
|
| 1986 |
Wendel JF, Stuber CW, Edwards MD, Goodman MM. Duplicated chromosome segments in maize (Zea mays L.): further evidence from hexokinase isozymes Theoretical and Applied Genetics. 72: 178-185. DOI: 10.1007/Bf00266990 |
0.361 |
|
| 1984 |
Wendel JF, Parks CR. Distorted segregation and linkage of alcohol dehydrogenase genes in Camellia japonica L. (Theacease) Biochemical Genetics. 22: 739-748. PMID 6388563 DOI: 10.1007/Bf00485857 |
0.347 |
|
| 1982 |
Wendel JF, Parks CR. Genetic control of isozyme variation in Camellia japonica L Journal of Heredity. 73: 197-204. DOI: 10.1093/Oxfordjournals.Jhered.A109617 |
0.304 |
|
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