| Shaad M. Ahmad | Systems Biology, Developmental Biology, Genetics, Functional Genomics, Cardiogenesis | | | 2002 | Bruce S. Baker (grad student) |
| Rosanna Anolani Alegado | | | | 2007 | Man-Wah Tan (grad student) |
| Arash A. Alizadeh | gene expression | | | 2003 | Patrick O. Brown (grad student) |
| Michelle N. Arbeitman | behavior | | | | Bruce S. Baker (post-doc) |
| Spyros Artavanis-Tsakonas | notch signaling | | | | David S. Hogness (post-doc) |
| Janelle S. Ayres | infection, immunity | | | 2009 | David S. Schneider (grad student) |
| Bruce S. Baker | Genetics, Neuroscience | | | | |
| Maite Barron | TE polymorphism in Drosophila | | | | Anna-Sophie Fiston-Lavier (grad student) |
| Philip A. Beachy | Hedgehog proteins and other extracellular signals in morphogenesis | | | 1986 | David S. Hogness (grad student) |
| George Wells Beadle | Neurospora genetics | | | | |
| Jeremy T. Blitzer | | | | 2006 | Roel Nusse (grad student) |
| David Mahlon Bonner | | | 1942 | 1946 | George Wells Beadle (research scientist) |
| Stephanie M. Brandt | infection, immunity | | | 2006 | David S. Schneider (grad student) |
| Patrick O. Brown | gene expression | | | | |
| Kenneth M. Cadigan | Wnt signaling, transcription, development | | | | Roel Nusse (post-doc) |
| Marianne C. Campbell | Immunology, Genetics | | | 2007 | Man-Wah Tan (grad student) |
| Arnaldo Carreira-Rosario | Development, Neuroscience | Neurobiology | 2018 | | Thomas Clandinin (post-doc) |
| Matthew Carrigan | | | 2009 | 2010 | Anna-Sophie Fiston-Lavier (research assistant) |
| Elizabeth Danhwa Chao | | | | 2007 | Mark Krasnow (grad student) |
| Wei-Shen Chen | cell polarity | | | 2007 | Jeff Axelrod (grad student) |
| Sidi Chen | Molecular biology, cancer, gene editing, genomics, evolution, immunology | | | | |
| Nam Kyoung Cho | | | | 2003 | Mark Krasnow (grad student) |
| Lara Shayne Collier | | | | 2003 | Matthew P. Scott (grad student) |
| Nicholas R. Cozzarelli | | | | | Arthur Kornberg (post-doc) |
| Tyler Cutforth | | | | | Kang Shen (post-doc) |
| Jerel C. Davis | | | | 2006 | Dmitri Petrov (grad student) |
| Walter Patrick Devine | | | | 2006 | Mark Krasnow (grad student) |
| Maximilian Diehn | gene expression | | | 2004 | Patrick O. Brown (grad student) |
| Eric Andrew Evans | | | | 2008 | Man-Wah Tan (grad student) |
| Delphine Fagegaltier | Dosage compensation, Sex determination, Chromatin, RNA interference, Viral defense, piRNAs, miRNAs | Biological Sciences | 2001 | 2004 | Bruce S. Baker (post-doc) |
| Anna-Sophie Fiston-Lavier | Transposable elements, duplication, evolution, adaptation, population genomics, NGS | | | | Dmitri Petrov (post-doc), Hadi Quesneville (grad student) |
| Margaret T. (Minx) Fuller | stem cell differentiation | | | | |
| Michael J. Galko | Wound healing | | 2000 | 2005 | Mark Krasnow (post-doc) |
| Carrie M. Garrett-Engele | Genetics, Neuroscience | | | 2000 | Bruce S. Baker (grad student) |
| Nandita R. Garud | Evolution in natural populations, Drosophila, microbiome | | | | Dmitri Petrov (grad student) |
| Audrey P. Gasch | gene expression | | | 2000 | Patrick O. Brown (grad student) |
| Greg Gibson | Evolutionary Genomics | | | 1994 | David S. Hogness (post-doc) |
| Daryl M. Gohl | Molecular Biology, Genetics | Neurobiology | 2008 | 2014 | Thomas Clandinin (post-doc) |
| David Gokhman | Molecular evolution | | | | |
| David Goldstein | | | | 1994 | Marcus W. Feldman (grad student) |
| Monica Gorman | | | | | Bruce S. Baker (grad student) |
| Ethan J. Greenblatt | Germline Development, Developmental Quiescence, Translation | Biology | 2007 | 2011 | Ron Kopito (grad student) |
| Michael Grunstein | Chromosomal Structures and Gene Activity | | | 1975 | David S. Hogness (post-doc) |
| Kimberly A. Harnish | | | | 2008 | Roel Nusse (grad student) |
| Joy Hatzidakis | | | | 2008 | Bruce S. Baker (grad student) |
| Karen S. Ho | | | | 2002 | Matthew P. Scott (grad student) |
| David S. Hogness | genetic regulation | | | | |
| Evan Hurowitz | gene expression | | | 2005 | Patrick O. Brown (grad student) |
| Farhad Bryan Imam | | | | 2004 | Mark Krasnow (grad student) |
| Kenneth D. Irvine | Cell-signaling, growth control, cancer, morphogenesis, mechanotransduction | | | 1991 | David S. Hogness (grad student) |
| Lesley A. Jarvis | molecular, genetic, and cellular mechanisms of tracheal development | | | 2008 | Mark Krasnow (grad student) |
| Gregory S X E Jefferis | Olfactory System, Drosophila | | 1999 | 2003 | Liqun Luo (grad student) |
| Rishabh Kapoor | | | | | Jan Skotheim (research assistant) |
| Eric L. Keisman | | | | 2001 | Bruce S. Baker (grad student) |
| Amy Kiger | membrane trafficking | | | 2001 | Margaret T. (Minx) Fuller (grad student) |
| Dennis Chun-Yone Ko | | | | 2003 | Matthew P. Scott (grad student) |
| Charlene Y. Kon | | | | 2003 | Roel Nusse (grad student) |
| Mark Krasnow | molecular, genetic, and cellular mechanisms of tracheal development | | | 1988 | David S. Hogness (post-doc) |
| Mitzi Kuroda | | Biological Sciences | 1981 | 1987 | Charles Yanofsky (grad student) |
| Charles D. Laird | | | | 1966 | Walter Fred Bodmer (grad student) |
| Tzumin Lee | Drosophila | | | | Liqun Luo (post-doc) |
| Boaz Pirie Levi | | | | 2006 | Mark Krasnow (grad student) |
| Tristan Qingyun Li | Neuron-glia interaction, microglia, brain development aging and disease | Neurobiology Neurology | 2017 | 2019 | Ben A. Barres (post-doc), Tony Wyss-Coray (post-doc) |
| Richard P. Lifton | Genetics, Human Development, Pathology | | | 1986 | David S. Hogness (grad student) |
| Howard Lipshitz | | Biochemistry | 1982 | 1986 | David S. Hogness (post-doc) |
| John T. Lis | transcription and processing of mRNAs | | | | David S. Hogness (post-doc) |
| Barry L. Lubarsky | | | | 2004 | Mark Krasnow (grad student) |
| Liqun Luo | | | | | |
| Stefan Luschnig | tracheal development, epithelial biology | | | | Mark Krasnow (post-doc) |
| Dali Ma | | | | 2006 | Jeff Axelrod (grad student) |
| Richard S. Mann | Drosophila development, Hox genes, appendages | | | | |
| Gerard Manning | Bioinformatics, Genomics, Oncology, Evolution | | | | |
| Elizabeth C. Marin | developmental neurobiology of Drosophila | | 2000 | 2005 | Liqun Luo (grad student) |
| Susan W. Marino | | | | 2004 | Roel Nusse (grad student) |
| Heather L. McCullough | gene expression | | | 2009 | Patrick O. Brown (grad student) |
| Nathan McDonald | Synapse formation; neuronal development; synaptic function | | 2017 | 2023 | Kang Shen (post-doc) |
| David J. Mellert | Genetics, Neuroscience | | | 2009 | Bruce S. Baker (grad student) |
| Robert L. Metzenberg | Gene Regulation in Metabolic Pathways | | | | David D. Perkins (collaborator) |
| Ross J. Metzger | molecular, genetic, and cellular mechanisms of tracheal development | | | 2008 | Mark Krasnow (grad student) |
| Mark M. Metzstein | NMD and trachea morphogenesis | | | | Mark Krasnow (post-doc) |
| Amanda J. Mikels | | | | 2007 | Roel Nusse (grad student) |
| Herschel K. Mitchell | | | | | George Wells Beadle (post-doc) |
| Denise J. Montell | Cell migration, Drosophila genetics and cell biology | | 1984 | 1988 | Corey S. Goodman (grad student) |
| John Robert Nambu | Drosophila Apoptosis, | | | | Richard Scheller (grad student) |
| Roel Nusse | | | | | |
| Youcef Ouadah | | Biochemistry | 2012 | 2019 | Mark Krasnow (grad student) |
| Chana Palmer | gene expression | | | 2006 | Patrick O. Brown (grad student) |
| Sangbin Park | Neuropeptides | | | | |
| Dmitri Petrov | | | | | |
| Linh N. Pham | infection, immunity | | | 2008 | David S. Schneider (grad student) |
| Suzanne D. Plump | Genetics, Neuroscience | | | 2000 | Bruce S. Baker (grad student) |
| Christopher J. Potter | drosophila neuroscience, olfaction, cancer | | 2002 | 2010 | Liqun Luo (post-doc) |
| Michael Povelones | | | | 2005 | Roel Nusse (grad student) |
| Michael T Raissig | | | | | |
| Jessica A Rhodes | evolutionary genetics, population genetics, fly genetics | Biology | 2020 | | Dmitri Petrov (grad student) |
| Stephen M. Rothenberg | gene expression | | | 2002 | Patrick O. Brown (grad student) |
| Kathleen H. Rubins | gene expression | | | 2006 | Patrick O. Brown (grad student) |
| Yael T. Salzman | | | | 2007 | Dmitri Petrov (grad student) |
| Alexandria Schieber | | | | | Janelle S. Ayres (grad student) |
| David S. Schneider | infection, immunity | | | | |
| Molly Schumer | | | | | |
| Brian P. Scottoline | gene expression | | | 2000 | Patrick O. Brown (grad student) |
| Diamantis Sellis | | | 2008 | 2014 | Dmitri Petrov (grad student) |
| Katherine Shim | | | | 2001 | Mark Krasnow (grad student) |
| Mark L. Siegal | evolution, sex | | 1998 | 2004 | Bruce S. Baker (post-doc) |
| Michael A Simon | | | | | |
| Nadia D. Singh | | | | 2006 | Dmitri Petrov (grad student) |
| Jan Skotheim | | | | | |
| Sandra S. Slutz | Genetics | | | 2007 | Man-Wah Tan (grad student) |
| Dean Smith | | | 1972 | 1967 | Donald M. Wilson (grad student) |
| Rachel Smith-Bolton | Drosophila, tissue regeneration | | 1996 | 2003 | Michael A Simon (grad student) |
| Julie B. Sneddon | gene expression | | | 2006 | Patrick O. Brown (grad student) |
| Yan Song | Neural stem cells | Pathology | | | Bingwei Lu (post-doc) |
| Maria L Spletter | muscle development, alternative splicing, RNA regulatory processes | Biological Sciences | 2003 | 2010 | Liqun Luo (grad student) |
| Kevin Struhl | Transcription | | | 1979 | Ronald W. Davis (grad student) |
| Vikram Sudarshan | Drosophila Developmental Biology | | | | |
| Paul A. Swenson | | | | 1951 | Arthur C. Giese (grad student) |
| Carl Sennrich Thummel | | | 1983 | 1986 | David S. Hogness (post-doc) |
| Stephanie Jewel Toering | | | | 2003 | Mark Krasnow (grad student) |
| Kyle J. Travaglini | Alzheimer's disease, neurobiology, genomics | Biochemistry | 2015 | 2021 | Mark Krasnow (grad student) |
| Caroline E. Uhlik | gene expression | | | 2005 | Patrick O. Brown (grad student) |
| Christopher C. VanLang | Chemical Engineering | Chemical Engineering | 2011 | 2014 | James R. Swartz (grad student) |
| Mariel M. Velez | Visual system,behavior, Drosophila | | | | |
| Xinnan Wang | Neurosurgery | | | | |
| Irving L. Weissman | Stem cell biology, Regenerative medicine | | | | Henry S. Kaplan (research scientist), Leonard Arthur Herzenberg (research assistant) |
| Pieter Croissant Wensink | | | | | David S. Hogness (post-doc) |
| Kevin P. White | Genomics | | 1993 | 1998 | David S. Hogness (grad student) |
| Helen White-Cooper | spermatogenesis, regulation of gene expression | | 1995 | 1997 | Margaret T. (Minx) Fuller (post-doc) |
| Chi-Hwa Wu | | | | 2002 | Roel Nusse (grad student) |
| Yu K. Xu | | | | 2002 | Roel Nusse (grad student) |
| Michael W. Young | | | 1975 | 1978 | David S. Hogness (post-doc) |
| Wenyu Zhou | | | | | Michael Snyder (post-doc) |