| Year |
Citation |
Score |
| 2023 |
Peris D, Ubbelohde EJ, Kuang MC, Kominek J, Langdon QK, Adams M, Koshalek JA, Hulfachor AB, Opulente DA, Hall DJ, Hyma K, Fay JC, Leducq JB, Charron G, Landry CR, et al. Macroevolutionary diversity of traits and genomes in the model yeast genus Saccharomyces. Nature Communications. 14: 690. PMID 36755033 DOI: 10.1038/s41467-023-36139-2 |
0.741 |
|
| 2019 |
Li XC, Fay JC. Multiple Changes Underlie Allelic Divergence of Between Species. G3 (Bethesda, Md.). PMID 31519745 DOI: 10.1534/G3.119.400616 |
0.508 |
|
| 2019 |
Baker EP, Peris D, Moriarty RV, Li XC, Fay JC, Hittinger CT. Mitochondrial DNA and temperature tolerance in lager yeasts. Science Advances. 5: eaav1869. PMID 30729163 DOI: 10.1126/Sciadv.Aav1869 |
0.413 |
|
| 2019 |
Li XC, Peris D, Hittinger CT, Sia EA, Fay JC. Mitochondria-encoded genes contribute to evolution of heat and cold tolerance in yeast. Science Advances. 5: eaav1848. PMID 30729162 DOI: 10.1126/Sciadv.Aav1848 |
0.481 |
|
| 2017 |
Li XC, Fay JC. Cis-regulatory divergence in gene expression between two thermally divergent yeast species. Genome Biology and Evolution. PMID 28431042 DOI: 10.1093/Gbe/Evx072 |
0.545 |
|
| 2017 |
Peris D, Moriarty RV, Alexander WG, Baker E, Sylvester K, Sardi M, Langdon QK, Libkind D, Wang QM, Bai FY, Leducq JB, Charron G, Landry CR, Sampaio JP, Gonçalves P, ... ... Fay JC, et al. Hybridization and adaptive evolution of diverse Saccharomyces species for cellulosic biofuel production. Biotechnology For Biofuels. 10: 78. PMID 28360936 DOI: 10.1186/S13068-017-0763-7 |
0.704 |
|
| 2015 |
Williams KM, Liu P, Fay JC. Evolution of ecological dominance of yeast species in high-sugar environments. Evolution; International Journal of Organic Evolution. PMID 26087012 DOI: 10.1111/Evo.12707 |
0.514 |
|
| 2015 |
Aad G, Abbott B, Abdallah J, Abdinov O, Aben R, Abolins M, AbouZeid OS, Abramowicz H, Abreu H, Abreu R, Abulaiti Y, Acharya BS, Adamczyk L, Adams DL, Adelman J, ... ... Fay J, et al. Combined Measurement of the Higgs Boson Mass in pp Collisions at sqrt[s]=7 and 8 TeV with the ATLAS and CMS Experiments. Physical Review Letters. 114: 191803. PMID 26024162 DOI: 10.1103/Physrevlett.114.191803 |
0.325 |
|
| 2015 |
Nikolskiy I, Conrad DF, Chun S, Fay JC, Cheverud JM, Lawson HA. Using whole-genome sequences of the LG/J and SM/J inbred mouse strains to prioritize quantitative trait genes and nucleotides. Bmc Genomics. 16: 415. PMID 26016481 DOI: 10.1186/S12864-015-1592-3 |
0.683 |
|
| 2014 |
Swain Lenz D, Riles L, Fay JC. Heterochronic meiotic misexpression in an interspecific yeast hybrid. Molecular Biology and Evolution. 31: 1333-42. PMID 24608322 DOI: 10.1093/molbev/msu098 |
0.659 |
|
| 2013 |
Chun S, Plunkett J, Teramo K, Muglia LJ, Fay JC. Fine-mapping an association of FSHR with preterm birth in a Finnish population. Plos One. 8: e78032. PMID 24205076 DOI: 10.1371/Journal.Pone.0078032 |
0.651 |
|
| 2013 |
Cromie GA, Hyma KE, Ludlow CL, Garmendia-Torres C, Gilbert TL, May P, Huang AA, Dudley AM, Fay JC. Genomic sequence diversity and population structure of Saccharomyces cerevisiae assessed by RAD-seq. G3 (Bethesda, Md.). 3: 2163-71. PMID 24122055 DOI: 10.1534/G3.113.007492 |
0.732 |
|
| 2013 |
Hyma KE, Fay JC. Mixing of vineyard and oak-tree ecotypes of Saccharomyces cerevisiae in North American vineyards. Molecular Ecology. 22: 2917-30. PMID 23286354 DOI: 10.1111/Mec.12155 |
0.721 |
|
| 2011 |
Hyma KE, Saerens SM, Verstrepen KJ, Fay JC. Divergence in wine characteristics produced by wild and domesticated strains of Saccharomyces cerevisiae. Fems Yeast Research. 11: 540-51. PMID 22093681 DOI: 10.1111/J.1567-1364.2011.00746.X |
0.707 |
|
| 2011 |
Chun S, Fay JC. Evidence for hitchhiking of deleterious mutations within the human genome. Plos Genetics. 7: e1002240. PMID 21901107 DOI: 10.1371/Journal.Pgen.1002240 |
0.63 |
|
| 2011 |
Plunkett J, Doniger S, Orabona G, Morgan T, Haataja R, Hallman M, Puttonen H, Menon R, Kuczynski E, Norwitz E, Snegovskikh V, Palotie A, Peltonen L, Fellman V, DeFranco EA, ... ... Fay J, et al. An evolutionary genomic approach to identify genes involved in human birth timing. Plos Genetics. 7: e1001365. PMID 21533219 DOI: 10.1371/Journal.Pgen.1001365 |
0.765 |
|
| 2010 |
Plunkett J, Doniger S, Morgan T, Haataja R, Hallman M, Puttonen H, Menon R, Kuczynski E, Norwitz E, Snegovskikh V, Palotie A, Peltonen L, Fellman V, DeFranco EA, Chaudhari BP, ... ... Fay JC, et al. Primate-specific evolution of noncoding element insertion into PLA2G4C and human preterm birth. Bmc Medical Genomics. 3: 62. PMID 21184677 DOI: 10.1186/1755-8794-3-62 |
0.77 |
|
| 2010 |
Venkataram S, Fay JC. Is transcription factor binding site turnover a sufficient explanation for cis-regulatory sequence divergence? Genome Biology and Evolution. 2: 851-8. PMID 21068212 DOI: 10.1093/Gbe/Evq066 |
0.775 |
|
| 2010 |
Will JL, Kim HS, Clarke J, Painter JC, Fay JC, Gasch AP. Incipient balancing selection through adaptive loss of aquaporins in natural Saccharomyces cerevisiae populations. Plos Genetics. 6: e1000893. PMID 20369021 DOI: 10.1371/Journal.Pgen.1000893 |
0.626 |
|
| 2009 |
Chun S, Fay JC. Identification of deleterious mutations within three human genomes. Genome Research. 19: 1553-61. PMID 19602639 DOI: 10.1101/Gr.092619.109 |
0.631 |
|
| 2009 |
Druley TE, Vallania FL, Wegner DJ, Varley KE, Knowles OL, Bonds JA, Robison SW, Doniger SW, Hamvas A, Cole FS, Fay JC, Mitra RD. Quantification of rare allelic variants from pooled genomic DNA. Nature Methods. 6: 263-5. PMID 19252504 DOI: 10.1038/Nmeth.1307 |
0.759 |
|
| 2009 |
Doniger SW, Fay JC. Correction: Frequent Gain and Loss of Functional Transcription Factor Binding Sites Plos Computational Biology. 5. DOI: 10.1371/Annotation/363B6074-Caec-4238-B88F-Acbf45De498F |
0.733 |
|
| 2009 |
Matkovich SJ, Druley TE, Van Booven DJ, Chun S, Vallania FM, Hindes A, Fay JC, Mitra RD, Dorn II GW. Genetic Diversity and Novel SNP Discovery in Signaling Genes Revealed by Pooled Sequencing of Cardiomyopathy DNAs Journal of Cardiac Failure. 15: S40. DOI: 10.1016/J.Cardfail.2009.06.297 |
0.653 |
|
| 2008 |
Doniger SW, Kim HS, Swain D, Corcuera D, Williams M, Yang SP, Fay JC. A catalog of neutral and deleterious polymorphism in yeast. Plos Genetics. 4: e1000183. PMID 18769710 DOI: 10.1371/Journal.Pgen.1000183 |
0.781 |
|
| 2008 |
Misulovin Z, Schwartz YB, Li XY, Kahn TG, Gause M, MacArthur S, Fay JC, Eisen MB, Pirrotta V, Biggin MD, Dorsett D. Association of cohesin and Nipped-B with transcriptionally active regions of the Drosophila melanogaster genome. Chromosoma. 117: 89-102. PMID 17965872 DOI: 10.1007/S00412-007-0129-1 |
0.548 |
|
| 2007 |
Doniger SW, Fay JC. Frequent gain and loss of functional transcription factor binding sites. Plos Computational Biology. 3: e99. PMID 17530920 DOI: 10.1371/Journal.Pcbi.0030099 |
0.781 |
|
| 2006 |
Gertz J, Fay JC, Cohen BA. Phylogeny based discovery of regulatory elements. Bmc Bioinformatics. 7: 266. PMID 16716228 DOI: 10.1186/1471-2105-7-266 |
0.3 |
|
| 2005 |
Doniger SW, Huh J, Fay JC. Identification of functional transcription factor binding sites using closely related Saccharomyces species. Genome Research. 15: 701-9. PMID 15837806 DOI: 10.1101/Gr.3578205 |
0.769 |
|
| 2004 |
Fay JC, McCullough HL, Sniegowski PD, Eisen MB. Population genetic variation in gene expression is associated with phenotypic variation in Saccharomyces cerevisiae. Genome Biology. 5: R26. PMID 15059259 DOI: 10.1186/Gb-2004-5-4-R26 |
0.559 |
|
| 2003 |
Fay JC, Wu CI. Sequence divergence, functional constraint, and selection in protein evolution. Annual Review of Genomics and Human Genetics. 4: 213-35. PMID 14527302 DOI: 10.1146/annurev.genom.4.020303.162528 |
0.488 |
|
| 2002 |
Fay JC, Wyckoff GJ, Wu CI. Testing the neutral theory of molecular evolution with genomic data from Drosophila. Nature. 415: 1024-6. PMID 11875569 DOI: 10.1038/4151024a |
0.735 |
|
| 2001 |
Fay JC, Wu CI. The neutral theory in the genomic era Current Opinion in Genetics and Development. 11: 642-646. PMID 11682307 DOI: 10.1016/S0959-437X(00)00247-1 |
0.458 |
|
| 1999 |
Fay JC, Wu CI. A human population bottleneck can account for the discordance between patterns of mitochondrial versus nuclear DNA variation [1] Molecular Biology and Evolution. 16: 1003-1005. PMID 10406117 DOI: 10.1093/OXFORDJOURNALS.MOLBEV.A026175 |
0.4 |
|
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