| Year |
Citation |
Score |
| 2024 |
Emsley SA, Loughran RM, Shlafstein MD, Pfannmuller KM, De La Flor YT, Lein CG, Dove NC, Koyack MJ, Oline DK, Hanson TE, Videau P, Saw JH, Ushijima B. Fluctibacter corallii gen. nov., sp. nov., isolated from the coral Montipora capitata on a reef in Kāne'ohe Bay, O'ahu, Hawai'i, reclassification of Aestuariibacter halophilus as Fluctibacter halophilus comb. nov., and Paraglaciecola oceanifecundans as a later heterotypic synonym of Paraglaciecola agarilytica. Antonie Van Leeuwenhoek. 117: 45. PMID 38424217 DOI: 10.1007/s10482-024-01934-4 |
0.371 |
|
| 2023 |
Balbay MG, Shlafstein MD, Cockell C, Cady SL, Prescott RD, Lim DSS, Chain PSG, Donachie SP, Decho AW, Saw JH. Metabolic versatility of from geothermal features of Hawai'i and Chile as revealed by five metagenome-assembled genomes. Frontiers in Microbiology. 14: 1216591. PMID 37799600 DOI: 10.3389/fmicb.2023.1216591 |
0.655 |
|
| 2023 |
Eme L, Tamarit D, Caceres EF, Stairs CW, De Anda V, Schön ME, Seitz KW, Dombrowski N, Lewis WH, Homa F, Saw JH, Lombard J, Nunoura T, Li WJ, Hua ZS, et al. Inference and reconstruction of the heimdallarchaeial ancestry of eukaryotes. Nature. PMID 37316666 DOI: 10.1038/s41586-023-06186-2 |
0.383 |
|
| 2023 |
Leff RT, MacDougall J, Pavloudi C, Oliver L, Slattery K, Lissner G, Saw JH. Draft Genome Sequences of Three Bacterial Species from Aquatic Habitats near Washington, DC. Microbiology Resource Announcements. 12: e0131922. PMID 36840560 DOI: 10.1128/mra.01319-22 |
0.378 |
|
| 2022 |
Loughran RM, Diefendorf CM, Reill-VanSise JR, Mitchell EA, Vining OB, Gallegos DA, Miller G, Koyack MJ, Oline DK, Rivers OS, Ushijima B, Saw JH, Gaylor MO, McPhail KL, Videau P. Streptomyces spiramenti sp. nov., isolated from a deep-sea microbial mat. Archives of Microbiology. 204: 717. PMID 36401660 DOI: 10.1007/s00203-022-03326-6 |
0.403 |
|
| 2022 |
Shlafstein MD, Emsley SA, Loughran RM, O'Hanlon SM, Ushijima B, Videau P, Saw JH. Complete genome of Vibrio japonicus strain JCM 31412 and assessment of the Nereis clade of the genus Vibrio. Antonie Van Leeuwenhoek. PMID 36287289 DOI: 10.1007/s10482-022-01784-y |
0.44 |
|
| 2022 |
Prescott RD, Zamkovaya T, Donachie SP, Northup DE, Medley JJ, Monsalve N, Saw JH, Decho AW, Chain PSG, Boston PJ. Islands Within Islands: Bacterial Phylogenetic Structure and Consortia in Hawaiian Lava Caves and Fumaroles. Frontiers in Microbiology. 13: 934708. PMID 35935195 DOI: 10.3389/fmicb.2022.934708 |
0.598 |
|
| 2022 |
Loughran RM, Emsley SA, Jefferson T, Wasson BJ, Deadmond MC, Knauss TL, Pfannmuller KM, Lippert KJ, Miller G, Cline LC, Oline DK, Koyack MJ, Grant-Beurmann S, Gaylor MO, Saw JH, et al. Vibrio tetraodonis subsp. pristinus subsp. nov., isolated from the coral Acropora cytherea at Palmyra Atoll, and creation and emended description of Vibrio tetraodonis subsp. tetraodonis subsp. nov. Antonie Van Leeuwenhoek. PMID 35920985 DOI: 10.1007/s10482-022-01766-0 |
0.343 |
|
| 2021 |
Emsley SA, Pfannmuller KM, Ushijima B, Saw JH, Gaylor MO, Videau P. Draft Genome Sequence of Aestuariibacter halophilus Type Strain JC2043. Microbiology Resource Announcements. 10: e0109321. PMID 34913711 DOI: 10.1128/MRA.01093-21 |
0.38 |
|
| 2021 |
Emsley SA, Pfannmuller KM, Ushijima B, Saw JH, Koyack MJ, Videau P. Draft Genome Sequence of the Planctobacterium marinum Type Strain K7. Microbiology Resource Announcements. 10: e0107121. PMID 34881986 DOI: 10.1128/MRA.01071-21 |
0.301 |
|
| 2021 |
Saw JH, Cardona T, Montejano G. Complete Genome Sequencing of a Novel Gloeobacter Species from a Waterfall Cave in Mexico. Genome Biology and Evolution. 13. PMID 34850891 DOI: 10.1093/gbe/evab264 |
0.442 |
|
| 2020 |
Kumar RS, Galvis F, Wasson BJ, Saw JH, Oline DK, Barja JL, Ushijima B, Koyack MJ, Prado S, Videau P. Draft Genome Sequence of Vibrio ostreicida Strain PP-203, the Type Strain of a Pathogen That Infects Bivalve Larvae. Microbiology Resource Announcements. 9. PMID 32855258 DOI: 10.1128/MRA.00913-20 |
0.315 |
|
| 2020 |
Loughran RM, Mitchell EA, Vining OB, Gallegos DA, Deadmond MC, Wasson BJ, Pfannmuller KM, Paddock BE, Koyack MJ, Oline DK, Ushijima B, Saw JH, McPhail KL, Videau P. Draft Genome Sequence of sp. Strain ventii, Isolated from a Microbial Mat near Hydrothermal Vents within the Axial Seamount in the Pacific Ocean, and Resequencing of the Type Strains Streptomyces lonarensis NCL 716 and Streptomyces bohaiensis 11A07. Microbiology Resource Announcements. 9. PMID 32763929 DOI: 10.1128/MRA.00607-20 |
0.35 |
|
| 2020 |
Loughran RM, Esquivel AR, Deadmond MC, Koyack MJ, Paddock BE, O'Hanlon SM, Ushijima B, Saw JH, Videau P. Draft Genome Sequence of sp. Strain OCN044, Isolated from Palmyra Atoll, Northern Line Islands. Microbiology Resource Announcements. 9. PMID 32193232 DOI: 10.1128/MRA.00042-20 |
0.359 |
|
| 2019 |
Giovannoni SJ, Halsey KH, Saw J, Muslin O, Suffridge CP, Sun J, Lee CP, Moore ER, Temperton B, Noell SE. A Parasitic Arsenic Cycle That Shuttles Energy from Phytoplankton to Heterotrophic Bacterioplankton. Mbio. 10. PMID 30890605 DOI: 10.1128/Mbio.00246-19 |
0.331 |
|
| 2018 |
Spang A, Eme L, Saw JH, Caceres EF, Zaremba-Niedzwiedzka K, Lombard J, Guy L, Ettema TJG. Asgard archaea are the closest prokaryotic relatives of eukaryotes. Plos Genetics. 14: e1007080. PMID 29596421 DOI: 10.1371/Journal.Pgen.1007080 |
0.368 |
|
| 2016 |
Baker BJ, Saw JH, Lind AE, Lazar CS, Hinrichs KU, Teske AP, Ettema TJ. Genomic inference of the metabolism of cosmopolitan subsurface Archaea, Hadesarchaea. Nature Microbiology. 1: 16002. PMID 27572167 DOI: 10.1038/Nmicrobiol.2016.2 |
0.464 |
|
| 2016 |
Baker BJ, Saw JH, Lind AE, Lazar CS, Hinrichs K, Teske AP, Ettema TJG. Erratum: Corrigendum: Genomic inference of the metabolism of cosmopolitan subsurface Archaea, Hadesarchaea Nature Microbiology. 1. DOI: 10.1038/Nmicrobiol.2016.32 |
0.407 |
|
| 2015 |
Saw JH, Spang A, Zaremba-Niedzwiedzka K, Juzokaite L, Dodsworth JA, Murugapiran SK, Colman DR, Takacs-Vesbach C, Hedlund BP, Guy L, Ettema TJ. Exploring microbial dark matter to resolve the deep archaeal ancestry of eukaryotes. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 370: 20140328. PMID 26323759 DOI: 10.1098/Rstb.2014.0328 |
0.458 |
|
| 2015 |
Zepeda VK, Busse HJ, Golke J, Saw JH, Alam M, Donachie SP. Terasakiispira papahanaumokuakeensis gen. nov., sp. nov., a Gammaproteobacterium from Pearl and Hermes Atoll, Northwestern Hawaiian Islands. International Journal of Systematic and Evolutionary Microbiology. PMID 26297573 DOI: 10.1099/Ijsem.0.000438 |
0.624 |
|
| 2015 |
Spang A, Saw JH, Jørgensen SL, Zaremba-Niedzwiedzka K, Martijn J, Lind AE, van Eijk R, Schleper C, Guy L, Ettema TJ. Complex archaea that bridge the gap between prokaryotes and eukaryotes. Nature. 521: 173-9. PMID 25945739 DOI: 10.1038/Nature14447 |
0.438 |
|
| 2014 |
Guy L, Saw JH, Ettema TJ. The archaeal legacy of eukaryotes: a phylogenomic perspective. Cold Spring Harbor Perspectives in Biology. 6: a016022. PMID 24993577 DOI: 10.1101/Cshperspect.A016022 |
0.369 |
|
| 2013 |
Saw JH, Schatz M, Brown MV, Kunkel DD, Foster JS, Shick H, Christensen S, Hou S, Wan X, Donachie SP. Cultivation and complete genome sequencing of Gloeobacter kilaueensis sp. nov., from a lava cave in KÄ«lauea Caldera, Hawai'i. Plos One. 8: e76376. PMID 24194836 DOI: 10.1371/Journal.Pone.0076376 |
0.679 |
|
| 2013 |
Kuo I, Saw J, Kapan DD, Christensen S, Kaneshiro KY, Donachie SP. Flavobacterium akiainvivens sp. nov., from decaying wood of Wikstroemia oahuensis, Hawai'i, and emended description of the genus Flavobacterium. International Journal of Systematic and Evolutionary Microbiology. 63: 3280-6. PMID 23475344 DOI: 10.1099/Ijs.0.047217-0 |
0.631 |
|
| 2012 |
Saw JH, Yuryev A, Kanbe M, Hou S, Young AG, Aizawa S, Alam M. Complete genome sequencing and analysis of Saprospira grandis str. Lewin, a predatory marine bacterium. Standards in Genomic Sciences. 6: 84-93. PMID 22675601 DOI: 10.4056/Sigs.2445005 |
0.398 |
|
| 2009 |
Woyke T, Xie G, Copeland A, González JM, Han C, Kiss H, Saw JH, Senin P, Yang C, Chatterji S, Cheng JF, Eisen JA, Sieracki ME, Stepanauskas R. Assembling the marine metagenome, one cell at a time. Plos One. 4: e5299. PMID 19390573 DOI: 10.1371/Journal.Pone.0005299 |
0.517 |
|
| 2008 |
Saw JH, Mountain BW, Feng L, Omelchenko MV, Hou S, Saito JA, Stott MB, Li D, Zhao G, Wu J, Galperin MY, Koonin EV, Makarova KS, Wolf YI, Rigden DJ, et al. Encapsulated in silica: genome, proteome and physiology of the thermophilic bacterium Anoxybacillus flavithermus WK1. Genome Biology. 9: R161. PMID 19014707 DOI: 10.1186/Gb-2008-9-11-R161 |
0.332 |
|
| 2008 |
Hou S, Makarova KS, Saw JH, Senin P, Ly BV, Zhou Z, Ren Y, Wang J, Galperin MY, Omelchenko MV, Wolf YI, Yutin N, Koonin EV, Stott MB, Mountain BW, et al. Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia. Biology Direct. 3: 26. PMID 18593465 DOI: 10.1186/1745-6150-3-26 |
0.319 |
|
| 2008 |
Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KL, Salzberg SL, Feng L, Jones MR, Skelton RL, Murray JE, et al. The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature. 452: 991-6. PMID 18432245 DOI: 10.1038/Nature06856 |
0.473 |
|
| 2008 |
Yu Q, Hou S, Feltus FA, Jones MR, Murray JE, Veatch O, Lemke C, Saw JH, Moore RC, Thimmapuram J, Liu L, Moore PH, Alam M, Jiang J, Paterson AH, et al. Low X/Y divergence in four pairs of papaya sex-linked genes. The Plant Journal : For Cell and Molecular Biology. 53: 124-32. PMID 17973896 DOI: 10.1111/J.1365-313X.2007.03329.X |
0.322 |
|
| 2008 |
Suzuki JY, Tripathi S, Fermín GA, Jan F, Hou S, Saw JH, Ackerman CM, Yu Q, Schatz MC, Pitz KY, Yépes M, Fitch MMM, Manshardt RM, Slightom JL, Ferreira SA, et al. Characterization of Insertion Sites in Rainbow Papaya, the First Commercialized Transgenic Fruit Crop Tropical Plant Biology. 1: 293-309. DOI: 10.1007/S12042-008-9023-0 |
0.419 |
|
| 2007 |
Dunfield PF, Yuryev A, Senin P, Smirnova AV, Stott MB, Hou S, Ly B, Saw JH, Zhou Z, Ren Y, Wang J, Mountain BW, Crowe MA, Weatherby TM, Bodelier PL, et al. Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia. Nature. 450: 879-82. PMID 18004300 DOI: 10.1038/Nature06411 |
0.414 |
|
| 2007 |
Chen C, Yu Q, Hou S, Li Y, Eustice M, Skelton RL, Veatch O, Herdes RE, Diebold L, Saw J, Feng Y, Qian W, Bynum L, Wang L, Moore PH, et al. Construction of a sequence-tagged high-density genetic map of papaya for comparative structural and evolutionary genomics in brassicales. Genetics. 177: 2481-91. PMID 17947401 DOI: 10.1534/Genetics.107.081463 |
0.314 |
|
| 2007 |
Yu Q, Hou S, Hobza R, Feltus FA, Wang X, Jin W, Skelton RL, Blas A, Lemke C, Saw JH, Moore PH, Alam M, Jiang J, Paterson AH, Vyskot B, et al. Chromosomal location and gene paucity of the male specific region on papaya Y chromosome. Molecular Genetics and Genomics : Mgg. 278: 177-85. PMID 17520292 DOI: 10.1007/S00438-007-0243-Z |
0.339 |
|
| 2004 |
Hou S, Saw JH, Lee KS, Freitas TA, Belisle C, Kawarabayasi Y, Donachie SP, Pikina A, Galperin MY, Koonin EV, Makarova KS, Omelchenko MV, Sorokin A, Wolf YI, Li QX, et al. Genome sequence of the deep-sea gamma-proteobacterium Idiomarina loihiensis reveals amino acid fermentation as a source of carbon and energy. Proceedings of the National Academy of Sciences of the United States of America. 101: 18036-41. PMID 15596722 DOI: 10.1073/Pnas.0407638102 |
0.628 |
|
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