Jack Gilbert - Publications

Affiliations: 
Department of Surgery University of Chicago, Chicago, IL 

149 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 David MM, Tataru C, Daniels J, Schwartz J, Keating J, Hampton-Marcell J, Gottel N, Gilbert JA, Wall DP. Children with Autism and Their Typically Developing Siblings Differ in Amplicon Sequence Variants and Predicted Functions of Stool-Associated Microbes. Msystems. 6. PMID 33824194 DOI: 10.1128/mSystems.00193-20  0.36
2020 Zarraonaindia I, Martínez-Goñi XS, Liñero O, Muñoz-Colmenero M, Aguirre M, Abad D, Baroja-Careaga I, Diego A, Gilbert JA, Estonba A. Response of Horticultural Soil Microbiota to Different Fertilization Practices. Plants (Basel, Switzerland). 9. PMID 33171888 DOI: 10.3390/plants9111501  0.36
2020 Gupta N, Skinner KA, Summers ZM, Edirisinghe JN, Weisenhorn PB, Faria JP, Marshall CW, Sharma A, Gottel NR, Gilbert JA, Henry CS, O'Loughlin EJ. Draft Genome Sequence of sp. Strain ATCC 49442 (Formerly Micrococcus luteus), a Pyridine-Degrading Bacterium. Microbiology Resource Announcements. 9. PMID 32943555 DOI: 10.1128/MRA.00299-20  1
2020 Gupta N, Skinner KA, Summers ZM, Edirisinghe JN, Faria JP, Marshall CW, Sharma A, Gottel NR, Gilbert JA, Henry CS, O'Loughlin EJ. Draft Genome Sequence of 2-Methylpyridine-, 2-Ethylpyridine-, and 2-Hydroxypyridine-Degrading sp. Strain ATCC 49987. Microbiology Resource Announcements. 9. PMID 32816982 DOI: 10.1128/MRA.00748-20  1
2020 Skondra D, Rodriguez SH, Sharma A, Gilbert J, Andrews B, Claud EC. The early gut microbiome could protect against severe retinopathy of prematurity. Journal of Aapos : the Official Publication of the American Association For Pediatric Ophthalmology and Strabismus. PMID 32707176 DOI: 10.1016/j.jaapos.2020.03.010  1
2020 Coil DA, Neches RY, Lang JM, Jospin G, Brown WE, Cavalier D, Hampton-Marcell J, Gilbert JA, Eisen JA. Bacterial communities associated with cell phones and shoes. Peerj. 8: e9235. PMID 32551196 DOI: 10.7717/Peerj.9235  0.36
2020 Polster SP, Sharma A, Tanes C, Tang AT, Mericko P, Cao Y, Carrión-Penagos J, Girard R, Koskimäki J, Zhang D, Stadnik A, Romanos SG, Lyne SB, Shenkar R, Yan K, ... ... Gilbert JA, et al. Permissive microbiome characterizes human subjects with a neurovascular disease cavernous angioma. Nature Communications. 11: 2659. PMID 32461638 DOI: 10.1038/S41467-020-16436-W  1
2020 Shojaee S, Sharma A, Gottel N, Sanchez T, Gilbert JA, Rahman NM. Microbiome profile associated with malignant pleural effusion. Plos One. 15: e0232181. PMID 32384089 DOI: 10.1371/journal.pone.0232181  1
2019 Luu I, Sharma A, Guaderrama M, Peru M, Nation J, Page N, Carvalho D, Magit A, Jiang W, Leuin S, Bliss M, Bothwell M, Brigger M, Kearns D, Newbury R, ... ... Gilbert JA, et al. Immune Dysregulation in the Tonsillar Microenvironment of Periodic Fever, Aphthous Stomatitis, Pharyngitis, Adenitis (PFAPA) Syndrome. Journal of Clinical Immunology. PMID 31807979 DOI: 10.1007/s10875-019-00724-2  1
2019 Sharma A, Das P, Buschmann M, Gilbert JA. The future of microbiome-based therapeutics in clinical applications. Clinical Pharmacology and Therapeutics. PMID 31617205 DOI: 10.1002/cpt.1677  1
2019 Richardson M, Gottel N, Gilbert JA, Lax S. Microbial Similarity between Students in a Common Dormitory Environment Reveals the Forensic Potential of Individual Microbial Signatures. Mbio. 10. PMID 31363029 DOI: 10.1128/mBio.01054-19  0.72
2019 Hyoju SK, Zaborin A, Keskey R, Sharma A, Arnold W, van den Berg F, Kim SM, Gottel N, Bethel C, Charnot-Katsikas A, Jianxin P, Adriaansens C, Papazian E, Gilbert JA, Zaborina O, et al. Mice Fed an Obesogenic Western Diet, Administered Antibiotics, and Subjected to a Sterile Surgical Procedure Develop Lethal Septicemia with Multidrug-Resistant Pathobionts. Mbio. 10. PMID 31363025 DOI: 10.1128/mBio.00903-19  1
2019 Sharma A, Laxman B, Naureckas ET, Hogarth DK, Sperling AI, Solway J, Ober C, Gilbert JA, White SR. Associations between fungal and bacterial microbiota of airways and asthma endotypes. The Journal of Allergy and Clinical Immunology. PMID 31279011 DOI: 10.1016/j.jaci.2019.06.025  1
2019 Gupta N, Skinner KA, Summers ZM, Edirisinghe JN, Faria JP, Marshall CW, Sharma A, Gottel NR, Gilbert JA, Henry CS, O'Loughlin EJ. Draft Genome Sequence of sp. Strain ATCC 49988, a Quinoline-Degrading Bacterium. Microbiology Resource Announcements. 8. PMID 31221646 DOI: 10.1128/MRA.00403-19  1
2019 Marotz C, Sharma A, Humphrey G, Gottel N, Daum C, Gilbert JA, Eloe-Fadrosh E, Knight R. Triplicate PCR reactions for 16S rRNA gene amplicon sequencing are unnecessary. Biotechniques. PMID 31124709 DOI: 10.2144/btn-2018-0192  1
2019 Sharma A, Richardson M, Cralle L, Stamper CE, Maestre JP, Stearns-Yoder KA, Postolache TT, Bates KL, Kinney KA, Brenner LA, Lowry CA, Gilbert JA, Hoisington AJ. Longitudinal homogenization of the microbiome between both occupants and the built environment in a cohort of United States Air Force Cadets. Microbiome. 7: 70. PMID 31046835 DOI: 10.1186/S40168-019-0686-6  1
2019 Lax S, Cardona C, Zhao D, Winton VJ, Goodney G, Gao P, Gottel N, Hartmann EM, Henry C, Thomas PM, Kelley ST, Stephens B, Gilbert JA. Microbial and metabolic succession on common building materials under high humidity conditions. Nature Communications. 10: 1767. PMID 30992445 DOI: 10.1038/S41467-019-09764-Z  0.72
2019 Sharma A, Buschmann MM, Gilbert JA. Pharmacomicrobiomics: The holy grail to variability in drug response? Clinical Pharmacology and Therapeutics. PMID 30937887 DOI: 10.1002/Cpt.1437  1
2019 Timmis K, Cavicchioli R, Garcia JL, Nogales B, Chavarría M, Stein L, McGenity TJ, Webster N, Singh B, Handelsman J, de Lorenzo V, Pruzzo C, Timmis J, Martín JLR, Verstraete W, ... ... Gilbert J, et al. The urgent need for microbiology literacy in society. Environmental Microbiology. PMID 30912268 DOI: 10.1111/1462-2920.14611  1
2018 Sharma A, Schmidt M, Kiesel B, Mahato NK, Cralle L, Singh Y, Richnow HH, Gilbert JA, Arnold W, Lal R. Bacterial and Archaeal Viruses of Himalayan Hot Springs at Manikaran Modulate Host Genomes. Frontiers in Microbiology. 9: 3095. PMID 30619174 DOI: 10.3389/fmicb.2018.03095  1
2018 Strandwitz P, Kim KH, Terekhova D, Liu JK, Sharma A, Levering J, McDonald D, Dietrich D, Ramadhar TR, Lekbua A, Mroue N, Liston C, Stewart EJ, Dubin MJ, Zengler K, ... ... Gilbert JA, et al. GABA-modulating bacteria of the human gut microbiota. Nature Microbiology. PMID 30531975 DOI: 10.1038/S41564-018-0307-3  1
2018 Navarro G, Sharma A, Dugas LR, Forrester T, Gilbert JA, Layden BT. Gut microbial features can predict host phenotype response to protein deficiency. Physiological Reports. 6: e13932. PMID 30516001 DOI: 10.14814/phy2.13932  1
2018 Sharma A, Gilbert JA. Microbial exposure and human health. Current Opinion in Microbiology. 44: 79-87. PMID 30195150 DOI: 10.1016/j.mib.2018.08.003  1
2018 Cardona C, Lax S, Larsen P, Stephens B, Hampton-Marcell J, Edwardson CF, Henry C, Van Bonn B, Gilbert JA. Environmental Sources of Bacteria Differentially Influence Host-Associated Microbial Dynamics. Msystems. 3. PMID 29854953 DOI: 10.1128/mSystems.00052-18  0.72
2017 Kumar R, Verma H, Haider S, Bajaj A, Sood U, Ponnusamy K, Nagar S, Shakarad MN, Negi RK, Singh Y, Khurana JP, Gilbert JA, Lal R. Comparative Genomic Analysis Reveals Habitat-Specific Genes and Regulatory Hubs within the Genus Novosphingobium. Msystems. 2. PMID 28567447 DOI: 10.1128/mSystems.00020-17  1
2017 Gibbons SM, Lekberg Y, Mummey DL, Sangwan N, Ramsey PW, Gilbert JA. Invasive Plants Rapidly Reshape Soil Properties in a Grassland Ecosystem. Msystems. 2. PMID 28289729 DOI: 10.1128/mSystems.00178-16  0.92
2016 Gibbons SM, Scholz M, Hutchison AL, Dinner AR, Gilbert JA, Coleman ML. Disturbance Regimes Predictably Alter Diversity in an Ecologically Complex Bacterial System. Mbio. 7. PMID 27999158 DOI: 10.1128/Mbio.01372-16  0.92
2016 Gilbert JA, Quinn RA, Debelius J, Xu ZZ, Morton J, Garg N, Jansson JK, Dorrestein PC, Knight R. Microbiome-wide association studies link dynamic microbial consortia to disease. Nature. 535: 94-103. PMID 27383984 DOI: 10.1038/Nature18850  1
2016 Gupta V, Haider S, Sood U, Gilbert JA, Ramjee M, Forbes K, Singh Y, Lopes BS, Lal R. Comparative genomic analysis of novel Acinetobacter symbionts: A combined systems biology and genomics approach. Scientific Reports. 6: 29043. PMID 27378055 DOI: 10.1038/srep29043  1
2016 Thomas T, Moitinho-Silva L, Lurgi M, Björk JR, Easson C, Astudillo-García C, Olson JB, Erwin PM, López-Legentil S, Luter H, Chaves-Fonnegra A, Costa R, Schupp PJ, Steindler L, Erpenbeck D, ... Gilbert J, et al. Diversity, structure and convergent evolution of the global sponge microbiome. Nature Communications. 7: 11870. PMID 27306690 DOI: 10.1038/Ncomms11870  1
2016 Sharma A, Gilbert JA, Lal R. (Meta)genomic insights into the pathogenome of Cellulosimicrobium cellulans. Scientific Reports. 6: 25527. PMID 27151933 DOI: 10.1038/srep25527  1
2016 Cardona C, Weisenhorn P, Henry C, Gilbert JA. Network-based metabolic analysis and microbial community modeling. Current Opinion in Microbiology. 31: 124-131. PMID 27060776 DOI: 10.1016/J.Mib.2016.03.008  1
2016 O'Brien SL, Gibbons SM, Owens SM, Hampton-Marcell J, Johnston ER, Jastrow JD, Gilbert JA, Meyer F, Antonopoulos DA. Spatial scale drives patterns in soil bacterial diversity. Environmental Microbiology. PMID 26914164 DOI: 10.1111/1462-2920.13231  1
2016 De Filippis F, Genovese A, Ferranti P, Gilbert JA, Ercolini D. Metatranscriptomics reveals temperature-driven functional changes in microbiome impacting cheese maturation rate. Scientific Reports. 6: 21871. PMID 26911915 DOI: 10.1038/srep21871  1
2016 Dugas LR, Fuller M, Gilbert J, Layden BT. The obese gut microbiome across the epidemiologic transition. Emerging Themes in Epidemiology. 13: 2. PMID 26759600 DOI: 10.1186/s12982-015-0044-5  1
2016 Burstein D, Amaro F, Zusman T, Lifshitz Z, Cohen O, Gilbert JA, Pupko T, Shuman HA, Segal G. Genomic analysis of 38 Legionella species identifies large and diverse effector repertoires. Nature Genetics. 48: 167-75. PMID 26752266 DOI: 10.1038/Ng.3481  1
2016 Adams RI, Bhangar S, Dannemiller KC, Eisen JA, Fierer N, Gilbert JA, Green JL, Marr LC, Miller SL, Siegel JA, Stephens B, Waring MS, Bibby K. Ten questions concerning the microbiomes of buildings Building and Environment. 109: 224-234. DOI: 10.1016/J.Buildenv.2016.09.001  1
2015 Zarraonaindia I, Gilbert JA. Understanding grapevine-microbiome interactions: implications for viticulture industry. Microbial Cell (Graz, Austria). 2: 171-173. PMID 28357290 DOI: 10.15698/mic2015.05.204  0.36
2015 Gordon J, Gandhi P, Shekhawat G, Frazier A, Hampton-Marcell J, Gilbert JA. A simple novel device for air sampling by electrokinetic capture. Microbiome. 3: 79. PMID 26715467 DOI: 10.1186/s40168-015-0141-2  0.36
2015 Metcalf JL, Xu ZZ, Weiss S, Lax S, Van Treuren W, Hyde ER, Song SJ, Amir A, Larsen P, Sangwan N, Haarmann D, Humphrey GC, Ackermann G, Thompson LR, Lauber C, ... ... Gilbert JA, et al. Microbial community assembly and metabolic function during mammalian corpse decomposition. Science (New York, N.Y.). PMID 26657285 DOI: 10.1126/Science.Aad2646  1
2015 Yang T, Weisenhorn P, Gilbert JA, Ni Y, Sun R, Shi Y, Chu H. Carbon constrains fungal endophyte assemblages along the timberline. Environmental Microbiology. PMID 26627043 DOI: 10.1111/1462-2920.13153  1
2015 Gibbons SM, Gilbert JA. Microbial diversity-exploration of natural ecosystems and microbiomes. Current Opinion in Genetics & Development. 35: 66-72. PMID 26598941 DOI: 10.1016/j.gde.2015.10.003  1
2015 Ying S, Zeng DN, Chi L, Tan Y, Galzote C, Cardona C, Lax S, Gilbert J, Quan ZX. The Influence of Age and Gender on Skin-Associated Microbial Communities in Urban and Rural Human Populations. Plos One. 10: e0141842. PMID 26510185 DOI: 10.1371/journal.pone.0141842  1
2015 Fuller M, Priyadarshini M, Gibbons SM, Angueira AR, Brodsky M, Hayes MG, Kovatcheva-Datchary P, Backhed F, Gilbert JA, Lowe WL, Layden BT. The Short Chain Fatty Acid Receptor, FFA2, contributes to gestational glucose homeostasis. American Journal of Physiology. Endocrinology and Metabolism. ajpendo.00171.2015. PMID 26394664 DOI: 10.1152/ajpendo.00171.2015  1
2015 Lüchmann KH, Clark MS, Bainy AC, Gilbert JA, Craft JA, Chipman JK, Thorne MA, Mattos JJ, Siebert MN, Schroeder DC. Key metabolic pathways involved in xenobiotic biotransformation and stress responses revealed by transcriptomics of the mangrove oyster Crassostrea brasiliana. Aquatic Toxicology (Amsterdam, Netherlands). 166: 10-20. PMID 26186662 DOI: 10.1016/j.aquatox.2015.06.012  1
2015 Wood M, Gibbons SM, Lax S, Eshoo-Anton TW, Owens SM, Kennedy S, Gilbert JA, Hampton-Marcell JT. Athletic equipment microbiota are shaped by interactions with human skin. Microbiome. 3: 25. PMID 26113975 DOI: 10.1186/s40168-015-0088-3  0.92
2015 Burgsdorf I, Slaby BM, Handley KM, Haber M, Blom J, Marshall CW, Gilbert JA, Hentschel U, Steindler L. Lifestyle evolution in cyanobacterial symbionts of sponges. Mbio. 6: e00391-15. PMID 26037118 DOI: 10.1128/mBio.00391-15  1
2015 Van Bonn W, LaPointe A, Gibbons SM, Frazier A, Hampton-Marcell J, Gilbert J. Aquarium microbiome response to ninety-percent system water change: Clues to microbiome management. Zoo Biology. 34: 360-7. PMID 26031788 DOI: 10.1002/zoo.21220  1
2015 Lax S, Hampton-Marcell JT, Gibbons SM, Colares GB, Smith D, Eisen JA, Gilbert JA. Forensic analysis of the microbiome of phones and shoes. Microbiome. 3: 21. PMID 25969737 DOI: 10.1186/S40168-015-0082-9  0.92
2015 Sangwan N, Lambert C, Sharma A, Gupta V, Khurana P, Khurana JP, Sockett RE, Gilbert JA, Lal R. Arsenic rich Himalayan hot spring metagenomics reveal genetically novel predator-prey genotypes. Environmental Microbiology Reports. PMID 25953741 DOI: 10.1111/1758-2229.12297  1
2015 Shogan BD, Belogortseva N, Luong PM, Zaborin A, Lax S, Bethel C, Ward M, Muldoon JP, Singer M, An G, Umanskiy K, Konda V, Shakhsheer B, Luo J, Klabbers R, ... ... Gilbert J, et al. Collagen degradation and MMP9 activation by Enterococcus faecalis contribute to intestinal anastomotic leak. Science Translational Medicine. 7: 286ra68. PMID 25947163 DOI: 10.1126/Scitranslmed.3010658  1
2015 Lax S, Gilbert JA. Hospital-associated microbiota and implications for nosocomial infections. Trends in Molecular Medicine. 21: 427-32. PMID 25907678 DOI: 10.1016/j.molmed.2015.03.005  0.72
2015 Leone V, Gibbons SM, Martinez K, Hutchison AL, Huang EY, Cham CM, Pierre JF, Heneghan AF, Nadimpalli A, Hubert N, Zale E, Wang Y, Huang Y, Theriault B, Dinner AR, ... ... Gilbert JA, et al. Effects of diurnal variation of gut microbes and high-fat feeding on host circadian clock function and metabolism. Cell Host & Microbe. 17: 681-9. PMID 25891358 DOI: 10.1016/J.Chom.2015.03.006  1
2015 Zarraonaindia I, Owens SM, Weisenhorn P, West K, Hampton-Marcell J, Lax S, Bokulich NA, Mills DA, Martin G, Taghavi S, van der Lelie D, Gilbert JA. The soil microbiome influences grapevine-associated microbiota. Mbio. 6. PMID 25805735 DOI: 10.1128/Mbio.02527-14  1
2015 Lax S, Nagler CR, Gilbert JA. Our interface with the built environment: immunity and the indoor microbiota. Trends in Immunology. 36: 121-3. PMID 25754179 DOI: 10.1016/j.it.2015.01.001  0.72
2015 Huang EY, Inoue T, Leone VA, Dalal S, Touw K, Wang Y, Musch MW, Theriault B, Higuchi K, Donovan S, Gilbert J, Chang EB. Using corticosteroids to reshape the gut microbiome: implications for inflammatory bowel diseases. Inflammatory Bowel Diseases. 21: 963-72. PMID 25738379 DOI: 10.1097/MIB.0000000000000332  1
2015 Ramos T, Dedesko S, Siegel JA, Gilbert JA, Stephens B. Spatial and temporal variations in indoor environmental conditions, human occupancy, and operational characteristics in a new hospital building. Plos One. 10: e0118207. PMID 25729898 DOI: 10.1371/journal.pone.0118207  1
2015 Gilbert JA, Henry C. Predicting ecosystem emergent properties at multiple scales Environmental Microbiology Reports. 7: 20-22. PMID 25721595 DOI: 10.1111/1758-2229.12258  1
2015 Vitaglione P, Mennella I, Ferracane R, Rivellese AA, Giacco R, Ercolini D, Gibbons SM, La Storia A, Gilbert JA, Jonnalagadda S, Thielecke F, Gallo MA, Scalfi L, Fogliano V. Whole-grain wheat consumption reduces inflammation in a randomized controlled trial on overweight and obese subjects with unhealthy dietary and lifestyle behaviors: Role of polyphenols bound to cereal dietary fiber American Journal of Clinical Nutrition. 101: 251-261. PMID 25646321 DOI: 10.3945/ajcn.114.088120  0.92
2015 Amaro F, Wang W, Gilbert JA, Anderson OR, Shuman HA. Diverse protist grazers select for virulence-related traits in Legionella. The Isme Journal. 9: 1607-18. PMID 25575308 DOI: 10.1038/ismej.2014.248  1
2015 Yang XR, Li H, Nie SA, Su JQ, Weng BS, Zhu GB, Yao HY, Gilbert JA, Zhu YG. Potential contribution of anammox to nitrogen loss from paddy soils in Southern China. Applied and Environmental Microbiology. 81: 938-47. PMID 25416768 DOI: 10.1128/AEM.02664-14  1
2015 Gibbons SM, Schwartz T, Fouquier J, Mitchell M, Sangwan N, Gilbert JA, Kelley ST. Ecological succession and viability of human-associated microbiota on restroom surfaces. Applied and Environmental Microbiology. 81: 765-73. PMID 25398865 DOI: 10.1128/AEM.03117-14  0.92
2015 Larsen PE, Scott N, Post AF, Field D, Knight R, Hamada Y, Gilbert JA. Satellite remote sensing data can be used to model marine microbial metabolite turnover. The Isme Journal. 9: 166-79. PMID 25072414 DOI: 10.1038/ismej.2014.107  1
2015 Handley KM, Wrighton KC, Miller CS, Wilkins MJ, Kantor RS, Thomas BC, Williams KH, Gilbert JA, Long PE, Banfield JF. Disturbed subsurface microbial communities follow equivalent trajectories despite different structural starting points. Environmental Microbiology. 17: 622-36. PMID 24674078 DOI: 10.1111/1462-2920.12467  1
2015 Gilbert JA. Social behavior and the microbiome Elife. 2015. DOI: 10.7554/eLife.07322  1
2015 Davies N, Field D, Amaral-Zettler L, Barker K, Bicak M, Bourlat S, Coddington J, Deck J, Drummond A, Gilbert JA, Glöckner FO, Kottmann R, Meyer C, Morrison N, Obst M, et al. Report of the 14th Genomic Standards Consortium Meeting, Oxford, UK, September 17-21, 2012 Standards in Genomic Sciences. DOI: 10.4056/sigs.4319681  1
2015 Davidsen T, Madupu R, Sterk P, Field D, Garrity G, Gilbert J, Glöckner FO, Hirschman L, Kolker E, Kottmann R, Kyrpides N, Meyer F, Morrison N, Schriml L, Tatusova T, et al. Meeting Report from the Genomic Standards Consortium (GSC) Workshop 9 Standards in Genomic Sciences. DOI: 10.4056/sigs.1353455  1
2015 Gilbert JA, Meyer F, Knight R, Field D, Kyrpides N, Yilmaz P, Wooley J. Meeting report: GSC M5 roundtable at the 13th International Society for Microbial Ecology meeting in Seattle, WA, USA August 22-27, 2010 Standards in Genomic Sciences. DOI: 10.4056/sigs.1333437  1
2015 Gilbert JA. Our unique microbial identity Genome Biology. 16. DOI: 10.1186/s13059-015-0664-7  1
2015 Gibbons SM, Schwartz T, Fouquier J, Mitchell M, Sangwan N, Gilbert JA, Kelley ST. Ecological succession and viability of human-associated microbiota on restroom surfaces Applied and Environmental Microbiology. 81: 765-773. DOI: 10.1128/AEM.03117-14  1
2015 Lin X, Handley KM, Gilbert JA, Kostka JE. Metabolic potential of fatty acid oxidation and anaerobic respiration by abundant members of Thaumarchaeota and Thermoplasmata in deep anoxic peat Isme Journal. DOI: 10.1038/ismej.2015.77  1
2015 Shade A, Gilbert JA. Temporal patterns of rarity provide a more complete view of microbial diversity Trends in Microbiology. 23: 335-340. DOI: 10.1016/j.tim.2015.01.007  1
2015 Lax S, Gilbert JA. Hospital-associated microbiota and implications for nosocomial infections Trends in Molecular Medicine. 21: 427-432. DOI: 10.1016/j.molmed.2015.03.005  1
2015 Lax S, Nagler CR, Gilbert JA. Our interface with the built environment: Immunity and the indoor microbiota Trends in Immunology. 36: 121-123. DOI: 10.1016/j.it.2015.01.001  1
2015 Dedesko S, Stephens B, Gilbert JA, Siegel JA. Methods to assess human occupancy and occupant activity in hospital patient rooms Building and Environment. 90: 136-145. DOI: 10.1016/j.buildenv.2015.03.029  1
2014 Gilbert JA, Neufeld JD. Life in a World without Microbes. Plos Biology. 12: e1002020. PMID 25513890 DOI: 10.1371/journal.pbio.1002020  1
2014 Verma H, Kumar R, Oldach P, Sangwan N, Khurana JP, Gilbert JA, Lal R. Comparative genomic analysis of nine Sphingobium strains: insights into their evolution and hexachlorocyclohexane (HCH) degradation pathways. Bmc Genomics. 15: 1014. PMID 25418849 DOI: 10.1186/1471-2164-15-1014  1
2014 Pfister CA, Gilbert JA, Gibbons SM. The role of macrobiota in structuring microbial communities along rocky shores. Peerj. 2: e631. PMID 25337459 DOI: 10.7717/peerj.631  1
2014 Rubin BE, Sanders JG, Hampton-Marcell J, Owens SM, Gilbert JA, Moreau CS. DNA extraction protocols cause differences in 16S rRNA amplicon sequencing efficiency but not in community profile composition or structure. Microbiologyopen. 3: 910-21. PMID 25257543 DOI: 10.1002/mbo3.216  1
2014 Shogan BD, Smith DP, Christley S, Gilbert JA, Zaborina O, Alverdy JC. Intestinal anastomotic injury alters spatially defined microbiome composition and function. Microbiome. 2: 35. PMID 25250176 DOI: 10.1186/2049-2618-2-35  1
2014 Zaborin A, Smith D, Garfield K, Quensen J, Shakhsheer B, Kade M, Tirrell M, Tiedje J, Gilbert JA, Zaborina O, Alverdy JC. Membership and behavior of ultra-low-diversity pathogen communities present in the gut of humans during prolonged critical illness. Mbio. 5: e01361-14. PMID 25249279 DOI: 10.1128/Mbio.01361-14  1
2014 Shogan BD, An GC, Schardey HM, Matthews JB, Umanskiy K, Fleshman JW, Hoeppner J, Fry DE, Garcia-Granereo E, Jeekel H, van Goor H, Dellinger EP, Konda V, Gilbert JA, Auner GW, et al. Proceedings of the first international summit on intestinal anastomotic leak, Chicago, Illinois, October 4-5, 2012. Surgical Infections. 15: 479-89. PMID 25215465 DOI: 10.1089/sur.2013.114  1
2014 Hawley ER, Piao H, Scott NM, Malfatti S, Pagani I, Huntemann M, Chen A, Glavina Del Rio T, Foster B, Copeland A, Jansson J, Pati A, Tringe S, Gilbert JA, Lorenson TD, et al. Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California. Standards in Genomic Sciences. 9: 1259-74. PMID 25197496 DOI: 10.4056/sigs.5029016  1
2014 Field D, Sterk P, Kottmann R, De Smet JW, Amaral-Zettler L, Cochrane G, Cole JR, Davies N, Dawyndt P, Garrity GM, Gilbert JA, Glöckner FO, Hirschman L, Klenk HP, Knight R, et al. Genomic standards consortium projects. Standards in Genomic Sciences. 9: 599-601. PMID 25197446 DOI: 10.4056/Sigs.5559680  1
2014 Rideout JR, He Y, Navas-Molina JA, Walters WA, Ursell LK, Gibbons SM, Chase J, McDonald D, Gonzalez A, Robbins-Pianka A, Clemente JC, Gilbert JA, Huse SM, Zhou HW, Knight R, et al. Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences. Peerj. 2: e545. PMID 25177538 DOI: 10.7717/peerj.545  1
2014 Lax S, Smith DP, Hampton-Marcell J, Owens SM, Handley KM, Scott NM, Gibbons SM, Larsen P, Shogan BD, Weiss S, Metcalf JL, Ursell LK, Vázquez-Baeza Y, Van Treuren W, Hasan NA, ... ... Gilbert JA, et al. Longitudinal analysis of microbial interaction between humans and the indoor environment. Science (New York, N.Y.). 345: 1048-52. PMID 25170151 DOI: 10.1126/Science.1254529  1
2014 Shade A, Jones SE, Caporaso JG, Handelsman J, Knight R, Fierer N, Gilbert JA. Conditionally rare taxa disproportionately contribute to temporal changes in microbial diversity. Mbio. 5: e01371-14. PMID 25028427 DOI: 10.1128/Mbio.01371-14  1
2014 Parfrey LW, Walters WA, Lauber CL, Clemente JC, Berg-Lyons D, Teiling C, Kodira C, Mohiuddin M, Brunelle J, Driscoll M, Fierer N, Gilbert JA, Knight R. Communities of microbial eukaryotes in the mammalian gut within the context of environmental eukaryotic diversity. Frontiers in Microbiology. 5: 298. PMID 24995004 DOI: 10.3389/Fmicb.2014.00298  1
2014 Hawley ER, Malfatti SA, Pagani I, Huntemann M, Chen A, Foster B, Copeland A, del Rio TG, Pati A, Jansson JR, Gilbert JA, Tringe SG, Lorenson TD, Hess M. Metagenomes from two microbial consortia associated with Santa Barbara seep oil. Marine Genomics. 18: 97-9. PMID 24958360 DOI: 10.1016/j.margen.2014.06.003  1
2014 Winston ME, Hampton-Marcell J, Zarraonaindia I, Owens SM, Moreau CS, Gilbert JA, Hartsel J, Kennedy SJ, Gibbons SM. Understanding cultivar-specificity and soil determinants of the cannabis microbiome. Plos One. 9: e99641. PMID 24932479 DOI: 10.1371/Journal.Pone.0099641  1
2014 Gibbons SM, Jones E, Bearquiver A, Blackwolf F, Roundstone W, Scott N, Hooker J, Madsen R, Coleman ML, Gilbert JA. Human and environmental impacts on river sediment microbial communities. Plos One. 9: e97435. PMID 24841417 DOI: 10.1371/journal.pone.0097435  1
2014 Scott NM, Hess M, Bouskill NJ, Mason OU, Jansson JK, Gilbert JA. The microbial nitrogen cycling potential is impacted by polyaromatic hydrocarbon pollution of marine sediments. Frontiers in Microbiology. 5: 108. PMID 24723913 DOI: 10.3389/fmicb.2014.00108  1
2014 Dishaw LJ, Flores-Torres J, Lax S, Gemayel K, Leigh B, Melillo D, Mueller MG, Natale L, Zucchetti I, De Santis R, Pinto MR, Litman GW, Gilbert JA. The gut of geographically disparate Ciona intestinalis harbors a core microbiota. Plos One. 9: e93386. PMID 24695540 DOI: 10.1371/Journal.Pone.0093386  1
2014 Handley KM, Bartels D, O'Loughlin EJ, Williams KH, Trimble WL, Skinner K, Gilbert JA, Desai N, Glass EM, Paczian T, Wilke A, Antonopoulos D, Kemner KM, Meyer F. The complete genome sequence for putative H₂- and S-oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer-derived metagenome. Environmental Microbiology. 16: 3443-62. PMID 24628880 DOI: 10.1111/1462-2920.12453  1
2014 Davies N, Field D, Amaral-Zettler L, Clark MS, Deck J, Drummond A, Faith DP, Geller J, Gilbert J, Glöckner FO, Hirsch PR, Leong JA, Meyer C, Obst M, Planes S, et al. The founding charter of the Genomic Observatories Network. Gigascience. 3: 2. PMID 24606731 DOI: 10.1186/2047-217X-3-2  1
2014 Xiong J, Sun H, Peng F, Zhang H, Xue X, Gibbons SM, Gilbert JA, Chu H. Characterizing changes in soil bacterial community structure in response to short-term warming. Fems Microbiology Ecology. 89: 281-92. PMID 24476229 DOI: 10.1111/1574-6941.12289  0.92
2014 Piombino P, Genovese A, Esposito S, Moio L, Cutolo PP, Chambery A, Severino V, Moneta E, Smith DP, Owens SM, Gilbert JA, Ercolini D. Saliva from obese individuals suppresses the release of aroma compounds from wine. Plos One. 9: e85611. PMID 24465618 DOI: 10.1371/journal.pone.0085611  1
2014 Mason OU, Scott NM, Gonzalez A, Robbins-Pianka A, Bælum J, Kimbrel J, Bouskill NJ, Prestat E, Borglin S, Joyner DC, Fortney JL, Jurelevicius D, Stringfellow WT, Alvarez-Cohen L, Hazen TC, ... ... Gilbert JA, et al. Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill. The Isme Journal. 8: 1464-75. PMID 24451203 DOI: 10.1038/Ismej.2013.254  1
2014 Gittel A, Bárta J, Kohoutová I, Mikutta R, Owens S, Gilbert J, Schnecker J, Wild B, Hannisdal B, Maerz J, Lashchinskiy N, Capek P, Santrůčková H, Gentsch N, Shibistova O, et al. Distinct microbial communities associated with buried soils in the Siberian tundra. The Isme Journal. 8: 841-53. PMID 24335828 DOI: 10.1038/ismej.2013.219  1
2014 Gilbert JA, van der Lelie D, Zarraonaindia I. Microbial terroir for wine grapes. Proceedings of the National Academy of Sciences of the United States of America. 111: 5-6. PMID 24309378 DOI: 10.1073/pnas.1320471110  0.36
2014 Sangwan N, Verma H, Kumar R, Negi V, Lax S, Khurana P, Khurana JP, Gilbert JA, Lal R. Reconstructing an ancestral genotype of two hexachlorocyclohexane-degrading Sphingobium species using metagenomic sequence data. The Isme Journal. 8: 398-408. PMID 24030592 DOI: 10.1038/ismej.2013.153  1
2014 Gilbert JA, Ball M, Blainey P, Blaser MJ, Bohannan BJM, Bateman A, Bunge J, Dominguez-Bello MG, Epstein S, Fierer N, Gevers D, Grikscheit T, Hamdan LJ, Harvey J, Huttenhower C, et al. Meeting report for the 1st skin microbiota workshop, boulder, CO October 15-16 2012 Standards in Genomic Sciences. DOI: 10.1186/1944-3277-9-13  1
2014 O'Malley MA, Brigandt I, Love AC, Crawford JW, Gilbert JA, Knight R, Mitchell SD, Rohwer F. Multilevel research strategies and biological systems Philosophy of Science. 81: 811-828. DOI: 10.1086/677889  1
2013 Shogan BD, Smith DP, Packman AI, Kelley ST, Landon EM, Bhangar S, Vora GJ, Jones RM, Keegan K, Stephens B, Ramos T, Kirkup BC, Levin H, Rosenthal M, Foxman B, ... ... Gilbert J, et al. The Hospital Microbiome Project: Meeting report for the 2nd Hospital Microbiome Project, Chicago, USA, January 15(th), 2013. Standards in Genomic Sciences. 8: 571-9. PMID 24501640 DOI: 10.4056/Sigs.4187859  1
2013 Smith D, Alverdy J, An G, Coleman M, Garcia-Houchins S, Green J, Keegan K, Kelley ST, Kirkup BC, Kociolek L, Levin H, Landon E, Olsiewski P, Knight R, Siegel J, ... ... Gilbert J, et al. The Hospital Microbiome Project: Meeting Report for the 1st Hospital Microbiome Project Workshop on sampling design and building science measurements, Chicago, USA, June 7th-8th 2012. Standards in Genomic Sciences. 8: 112-7. PMID 23961316 DOI: 10.4056/Sigs.3717348  1
2013 Rubin BE, Gibbons SM, Kennedy S, Hampton-Marcell J, Owens S, Gilbert JA. Investigating the impact of storage conditions on microbial community composition in soil samples. Plos One. 8: e70460. PMID 23936206 DOI: 10.1371/journal.pone.0070460  1
2013 Kelley ST, Gilbert JA. Studying the microbiology of the indoor environment. Genome Biology. 14: 202. PMID 23514020 DOI: 10.1186/gb-2013-14-2-202  1
2013 Gibbons SM, Caporaso JG, Pirrung M, Field D, Knight R, Gilbert JA. Evidence for a persistent microbial seed bank throughout the global ocean. Proceedings of the National Academy of Sciences of the United States of America. 110: 4651-5. PMID 23487761 DOI: 10.1073/pnas.1217767110  0.92
2013 Zarraonaindia I, Smith DP, Gilbert JA. Beyond the genome: community-level analysis of the microbial world. Biology & Philosophy. 28: 261-282. PMID 23482824 DOI: 10.1007/s10539-012-9357-8  1
2013 Sperling M, Piontek J, Gerdts G, Wichels A, Schunck H, Roy AS, La Roche J, Gilbert J, Nissimov JI, Bittner L, Romac S, Riebesell U, Engel A. Effect of elevated CO2 on the dynamics of particle-attached and free-living bacterioplankton communities in an Arctic fjord Biogeosciences. 10: 181-191. DOI: 10.5194/bg-10-181-2013  1
2013 Gilbert JA. Biological oceanography: Some phytoplankton like it hot Nature Climate Change. 3: 954-955. DOI: 10.1038/nclimate2030  1
2012 Davies N, Meyer C, Gilbert JA, Amaral-Zettler L, Deck J, Bicak M, Rocca-Serra P, Assunta-Sansone S, Willis K, Field D. A call for an international network of genomic observatories (GOs). Gigascience. 1: 5. PMID 23587188 DOI: 10.1186/2047-217X-1-5  1
2012 Robbins RJ, Amaral-Zettler L, Bik H, Blum S, Edwards J, Field D, Garrity G, Gilbert JA, Kottmann R, Krishtalka L, Lapp H, Lawrence C, Morrison N, Tuama EÓ, Parr C, et al. RCN4GSC Workshop Report: Managing Data at the Interface of Biodiversity and (Meta)Genomics, March 2011. Standards in Genomic Sciences. 7: 159-65. PMID 23451294 DOI: 10.4056/Sigs.3156511  1
2012 Sangwan N, Lata P, Dwivedi V, Singh A, Niharika N, Kaur J, Anand S, Malhotra J, Jindal S, Nigam A, Lal D, Dua A, Saxena A, Garg N, Verma M, ... ... Gilbert JA, et al. Comparative metagenomic analysis of soil microbial communities across three hexachlorocyclohexane contamination levels. Plos One. 7: e46219. PMID 23029440 DOI: 10.1371/journal.pone.0046219  1
2012 Gilbert J, Li LL, Taghavi S, McCorkle SM, Tringe S, van der Lelie D. Bioprospecting metagenomics for new glycoside hydrolases. Methods in Molecular Biology (Clifton, N.J.). 908: 141-51. PMID 22843397 DOI: 10.1007/978-1-61779-956-3_14  1
2012 Gilbert JA, Bao Y, Wang H, Sansone SA, Edmunds SC, Morrison N, Meyer F, Schriml LM, Davies N, Sterk P, Wilkening J, Garrity GM, Field D, Robbins R, Smith DP, et al. Report of the 13(th) Genomic Standards Consortium Meeting, Shenzhen, China, March 4-7, 2012. Standards in Genomic Sciences. 6: 276-86. PMID 22768370 DOI: 10.4056/Sigs.2876184  1
2012 Knight R, Jansson J, Field D, Fierer N, Desai N, Fuhrman JA, Hugenholtz P, van der Lelie D, Meyer F, Stevens R, Bailey MJ, Gordon JI, Kowalchuk GA, Gilbert JA. Unlocking the potential of metagenomics through replicated experimental design. Nature Biotechnology. 30: 513-20. PMID 22678395 DOI: 10.1038/Nbt.2235  1
2012 Gilbert JA, Catlett C, Desai N, Knight R, White O, Robbins R, Sankaran R, Sansone SA, Field D, Meyer F. Conceptualizing a Genomics Software Institute (GSI). Standards in Genomic Sciences. 6: 136-44. PMID 22675605 DOI: 10.4056/sigs.2485911  1
2012 Larsen PE, Gibbons SM, Gilbert JA. Modeling microbial community structure and functional diversity across time and space. Fems Microbiology Letters. 332: 91-8. PMID 22553907 DOI: 10.1111/j.1574-6968.2012.02588.x  1
2012 Larsen PE, Field D, Gilbert JA. Predicting bacterial community assemblages using an artificial neural network approach. Nature Methods. 9: 621-5. PMID 22504588 DOI: 10.1038/nmeth.1975  1
2012 Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Huntley J, Fierer N, Owens SM, Betley J, Fraser L, Bauer M, Gormley N, Gilbert JA, Smith G, Knight R. Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. The Isme Journal. 6: 1621-4. PMID 22402401 DOI: 10.1038/Ismej.2012.8  1
2012 Delmont TO, Prestat E, Keegan KP, Faubladier M, Robe P, Clark IM, Pelletier E, Hirsch PR, Meyer F, Gilbert JA, Le Paslier D, Simonet P, Vogel TM. Structure, fluctuation and magnitude of a natural grassland soil metagenome. The Isme Journal. 6: 1677-87. PMID 22297556 DOI: 10.1038/Ismej.2011.197  1
2011 O'Brien SL, Glass EM, Brulc JM, Gilbert JA, Antonopoulos DA, Meyer F. Meeting report: the 2 annual argonne soils workshop, argonne national laboratory, chicago illinois, USA, october 6-8, 2010. Standards in Genomic Sciences. 5: 198-202. PMID 22180822 DOI: 10.4056/sigs.1874546  1
2011 Kulakova AN, Hobbs D, Smithen M, Pavlov E, Gilbert JA, Quinn JP, McGrath JW. Direct quantification of inorganic polyphosphate in microbial cells using 4′-6-diamidino-2-phenylindole (DAPI) Environmental Science and Technology. 45: 7799-7803. PMID 21875055 DOI: 10.1021/es201123r  1
2011 Birmingham A, Clemente JC, Desai N, Gilbert J, Gonzalez A, Kyrpides N, Meyer F, Nawrocki E, Sterk P, Stombaugh J, Weinberg Z, Wendel D, Leontis NB, Zirbel C, Knight R, et al. Meeting report of the RNA Ontology Consortium January 8-9, 2011. Standards in Genomic Sciences. 4: 252-6. PMID 21677862 DOI: 10.4056/Sigs.1724282  1
2011 Temperton B, Thomas S, Tait K, Parry H, Emery M, Allen M, Quinn J, Macgrath J, Gilbert J. Permanent draft genome sequence of Vibrio tubiashii strain NCIMB 1337 (ATCC19106). Standards in Genomic Sciences. 4: 183-90. PMID 21677855 DOI: 10.4056/sigs.1654066  1
2011 Yilmaz P, Kottmann R, Field D, Knight R, Cole JR, Amaral-Zettler L, Gilbert JA, Karsch-Mizrachi I, Johnston A, Cochrane G, Vaughan R, Hunter C, Park J, Morrison N, Rocca-Serra P, et al. Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications. Nature Biotechnology. 29: 415-20. PMID 21552244 DOI: 10.1038/Nbt.1823  1
2011 Yilmaz P, Gilbert JA, Knight R, Amaral-Zettler L, Karsch-Mizrachi I, Cochrane G, Nakamura Y, Sansone SA, Glöckner FO, Field D. The genomic standards consortium: bringing standards to life for microbial ecology. The Isme Journal. 5: 1565-7. PMID 21472015 DOI: 10.1038/ismej.2011.39  1
2011 Gilbert JA, Hughes M. Gene expression profiling: metatranscriptomics Methods in Molecular Biology (Clifton, N.J.). 733: 195-205. PMID 21431772 DOI: 10.1007/978-1-61779-089-8_14  1
2011 Gilbert JA, Dupont CL. Microbial metagenomics: beyond the genome. Annual Review of Marine Science. 3: 347-71. PMID 21329209 DOI: 10.1146/Annurev-Marine-120709-142811  1
2011 Temperton B, Gilbert JA, Quinn JP, McGrath JW. Novel analysis of oceanic surface water metagenomes suggests importance of polyphosphate metabolism in oligotrophic environments Plos One. 6. PMID 21305044 DOI: 10.1371/journal.pone.0016499  1
2011 Gilbert JA, Bailey M, Field D, Fierer N, Fuhrman JA, Hu B, Jansson J, Knight R, Kowalchuk GA, Kyrpides NC, Meyer F, Stevens R. The Earth Microbiome Project: The Meeting Report for the 1st International Earth Microbiome Project Conference, Shenzhen, China, June 13th-15th 2011 Standards in Genomic Sciences. 5: 243-247. DOI: 10.4056/Sigs.2134923  1
2010 Gilbert JA, Meyer F, Jansson J, Gordon J, Pace N, Tiedje J, Ley R, Fierer N, Field D, Kyrpides N, Glöckner FO, Klenk HP, Wommack KE, Glass E, Docherty K, et al. The Earth Microbiome Project: Meeting report of the "1 EMP meeting on sample selection and acquisition" at Argonne National Laboratory October 6 2010. Standards in Genomic Sciences. 3: 249-53. PMID 21304728 DOI: 10.4056/Aigs.1443528  1
2010 Gilbert JA, Meyer F, Antonopoulos D, Balaji P, Brown CT, Brown CT, Desai N, Eisen JA, Evers D, Field D, Feng W, Huson D, Jansson J, Knight R, Knight J, et al. Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project. Standards in Genomic Sciences. 3: 243-8. PMID 21304727 DOI: 10.4056/Sigs.1433550  1
2010 Glass E, Meyer F, Gilbert JA, Field D, Hunter S, Kottmann R, Kyrpides N, Sansone S, Schriml L, Sterk P, White O, Wooley J. Meeting Report from the Genomic Standards Consortium (GSC) Workshop 10. Standards in Genomic Sciences. 3: 225-31. PMID 21304723 DOI: 10.4056/sigs.1423520  1
2010 Hirschman L, Sterk P, Field D, Wooley J, Cochrane G, Gilbert J, Kolker E, Kyrpides N, Meyer F, Mizrachi I, Nakamura Y, Sansone SA, Schriml L, Tatusova T, White O, et al. Meeting Report: "Metagenomics, Metadata and Meta-analysis" (M3) Workshop at the Pacific Symposium on Biocomputing 2010. Standards in Genomic Sciences. 2: 357-60. PMID 21304719 DOI: 10.4056/Sigs.802738  1
2010 Heidelberg KB, Gilbert JA, Joint I. Marine genomics: At the interface of marine microbial ecology and biodiscovery: Minireview Microbial Biotechnology. 3: 531-543. PMID 20953417 DOI: 10.1111/j.1751-7915.2010.00193.x  1
2010 Craft JA, Gilbert JA, Temperton B, Dempsey KE, Ashelford K, Tiwari B, Hutchinson TH, Chipman JK. Pyrosequencing of Mytilus galloprovincialis cDNAs: tissue-specific expression patterns. Plos One. 5: e8875. PMID 20111607 DOI: 10.1371/journal.pone.0008875  1
2010 Thomas S, Burdett H, Temperton B, Wick R, Snelling D, McGrath JW, Quinn JP, Munn C, Gilbert JA. Evidence for phosphonate usage in the coral holobiont Isme Journal. 4: 459-461. PMID 19956272 DOI: 10.1038/ismej.2009.129  1
2010 Gilbert JA, Meyer F, Field D, Schriml LM, Garrity GM. Metagenomics: A foundling finds its feet Standards in Genomic Sciences. 3: 212-213. DOI: 10.4056/sigs.1213842  1
2009 Field D, Friedberg I, Sterk P, Kottmann R, Glöckner FO, Hirschman L, Garrity GM, Cochrane G, Wooley J, Gilbert J. Meeting Report: "Metagenomics, Metadata and Meta-analysis" (M3) Special Interest Group at ISMB 2009. Standards in Genomic Sciences. 1: 278-82. PMID 21304668 DOI: 10.4056/Sigs.641096  1
2009 Kulakova AN, Kulakov LA, Villarreal-Chiu JF, Gilbert JA, McGrath JW, Quinn JP. Expression of the phosphonoalanine-degradative gene cluster from Variovorax sp. Pal2 is induced by growth on phosphonoalanine and phosphonopyruvate Fems Microbiology Letters. 292: 100-106. PMID 19191873 DOI: 10.1111/j.1574-6968.2008.01477.x  1
2009 Gilbert JA, Thomas S, Cooley NA, Kulakova A, Field D, Booth T, McGrath JW, Quinn JP, Joint I. Potential for phosphonoacetate utilization by marine bacteria in temperate coastal waters Environmental Microbiology. 11: 111-125. PMID 18783384 DOI: 10.1111/j.1462-2920.2008.01745.x  1
2009 Rees AP, Gilbert JA, Kelly-Gerreyn BA. Nitrogen fixation in the western English Channel (NE Atlantic Ocean) Marine Ecology Progress Series. 374: 7-12. DOI: 10.3354/meps07771  1
2008 Gilbert JA, Mühling M, Joint I. A rare SAR11 fosmid clone confirming genetic variability in the 'Candidatus Pelagibacter ubique' genome Isme Journal. 2: 790-793. PMID 18496576 DOI: 10.1038/ismej.2008.49  1
2008 Sansone SA, Rocca-Serra P, Brandizi M, Brazma A, Field D, Fostel J, Garrow AG, Gilbert J, Goodsaid F, Hardy N, Jones P, Lister A, Miller M, Morrison N, Rayner T, et al. The first RSBI (ISA-TAB) workshop: "can a simple format work for complex studies?". Omics : a Journal of Integrative Biology. 12: 143-9. PMID 18447634 DOI: 10.1089/Omi.2008.0019  1
2006 Scotter AJ, Marshall CB, Graham LA, Gilbert JA, Garnham CP, Davies PL. The basis for hyperactivity of antifreeze proteins. Cryobiology. 53: 229-39. PMID 16887111 DOI: 10.1016/j.cryobiol.2006.06.006  1
2005 Gilbert JA, Davies PL, Laybourn-Parry J. A hyperactive, Ca2+-dependent antifreeze protein in an Antarctic bacterium Fems Microbiology Letters. 245: 67-72. PMID 15796981 DOI: 10.1016/j.femsle.2005.02.022  1
2003 Tomczak MM, Marshall CB, Gilbert JA, Davies PL. A facile method for determining ice recrystallization inhibition by antifreeze proteins. Biochemical and Biophysical Research Communications. 311: 1041-6. PMID 14623287 DOI: 10.1016/J.Bbrc.2003.10.106  1
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