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Steven M. Patrie - Publications

Affiliations: 
2004 University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
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43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Des Soye BJ, Melani RD, Hollas MAR, Duan J, Patrie SM, Fisher TD, Mattamana BB, Daud A, Pinelli DF, Ladner DP, Kelleher NL, Forte E. Characterization of the Antibody Response to SARS-CoV-2 Infection in COVID-19 Transplant versus Nontransplant Recipients by Ig-MS. Journal of Proteome Research. PMID 39146476 DOI: 10.1021/acs.jproteome.4c00285  0.406
2023 Kandi S, Cline EN, Rivera BM, Viola KL, Zhu J, Condello C, LeDuc RD, Klein WL, Kelleher NL, Patrie SM. Amyloid β Proteoforms Elucidated by Quantitative LC/MS in the 5xFAD Mouse Model of Alzheimer's Disease. Journal of Proteome Research. 22: 3475-3488. PMID 37847596 DOI: 10.1021/acs.jproteome.3c00353  0.442
2022 Greer JB, Early BP, Durbin KR, Patrie SM, Thomas PM, Kelleher NL, LeDuc RD, Fellers RT. ProSight Annotator: Complete control and customization of protein entries in UniProt XML files. Proteomics. e2100209. PMID 35286768 DOI: 10.1002/pmic.202100209  0.614
2022 Bartley SC, Proctor MT, Xia H, Ho E, Kang DS, Schuster K, Bicca MA, Seckler HS, Viola KL, Patrie SM, Kelleher NL, De Mello FG, Klein WL. An Essential Role for Alzheimer's-Linked Amyloid Beta Oligomers in Neurodevelopment: Transient Expression of Multiple Proteoforms during Retina Histogenesis. International Journal of Molecular Sciences. 23. PMID 35216328 DOI: 10.3390/ijms23042208  0.392
2021 Cline EN, Alvarez C, Duan J, Patrie SM. Online μSEC-nRPLC-MS for Improved Sensitivity of Intact Protein Detection of IEF-Separated Nonhuman Primate Cerebrospinal Fluid Proteins. Analytical Chemistry. 93: 16741-16750. PMID 34881887 DOI: 10.1021/acs.analchem.1c00396  0.459
2021 Schachner LF, Tran DP, Lee A, McGee JP, Jooss K, Durbin K, Seckler HDS, Adams L, Cline E, Melani R, Ives AN, Des Soye B, Kelleher NL, Patrie SM. Reassembling protein complexes after controlled disassembly by top-down mass spectrometry in native mode. International Journal of Mass Spectrometry. 465. PMID 34539228 DOI: 10.1016/j.ijms.2021.116591  0.624
2020 Corbett JR, Robinson DE, Patrie SM. Robustness and Ruggedness of Isoelectric Focusing and Superficially Porous Liquid Chromatography with Fourier Transform Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 33274937 DOI: 10.1021/jasms.0c00355  0.627
2020 Corbett JR, Robinson DE, Patrie SM. Robustness and Ruggedness of Isoelectric Focusing and Superficially Porous Liquid Chromatography with Fourier Transform Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 33274937 DOI: 10.1021/jasms.0c00355  0.627
2020 Ives A, Su T, Durbin KR, Early BP, Dos Santos Seckler H, Fellers RT, LeDuc RD, Schachner LF, Patrie SM, Kelleher NL. Using 10,000 fragment ions to inform scoring in native top-down proteomics. Journal of the American Society For Mass Spectrometry. PMID 32436704 DOI: 10.1021/Jasms.0C00026  0.639
2020 Kafader JO, Melani RD, Schachner LF, Ives A, Patrie SM, Kelleher NL, Compton PD. Native vs Denatured: An in Depth Investigation of Charge State and Isotope Distributions. Journal of the American Society For Mass Spectrometry. PMID 31971796 DOI: 10.1021/Jasms.9B00040  0.621
2019 Park HM, Satta R, Davis RG, Goo YA, LeDuc RD, Fellers RT, Greer JB, Romanova EV, Rubakhin SS, Tai R, Thomas PM, Sweedler JV, Kelleher NL, Patrie SM, Lasek AW. Multidimensional Top-Down Proteomics of Brain Region-Specific Mouse Brain Proteoforms Responsive to Cocaine and Estradiol. Journal of Proteome Research. PMID 31550894 DOI: 10.1021/Acs.Jproteome.9B00481  0.562
2019 Ro SY, Schachner LF, Koo CW, Purohit R, Remis JP, Kenney GE, Liauw BW, Thomas PM, Patrie SM, Kelleher NL, Rosenzweig AC. Native top-down mass spectrometry provides insights into the copper centers of membrane-bound methane monooxygenase. Nature Communications. 10: 2675. PMID 31209220 DOI: 10.1038/S41467-019-10590-6  0.588
2019 Schachner LF, Ives AN, McGee JP, Melani RD, Kafader JO, Compton PD, Patrie SM, Kelleher NL. Standard Proteoforms and Their Complexes for Native Mass Spectrometry. Journal of the American Society For Mass Spectrometry. PMID 30963455 DOI: 10.1007/S13361-019-02191-W  0.617
2018 Kirkpatrick CL, Parsley NC, Bartges TE, Wing CE, Kommineni S, Kristich CJ, Salzman NH, Patrie SM, Hicks LM. Exploring bioactive peptides from bacterial secretomes using PepSAVI-MS: identification and characterization of Bac-21 from Enterococcus faecalis pPD1. Microbial Biotechnology. PMID 30014612 DOI: 10.1111/1751-7915.13299  0.644
2018 Davis RG, Park HM, Kim K, Greer JB, Fellers RT, LeDuc RD, Romanova EV, Rubakhin SS, Zombeck JA, Wu C, Yau PM, Gao P, van Nispen AJ, Patrie SM, Thomas PM, et al. Top-Down Proteomics Enables Comparative Analysis of Brain Proteoforms Between Mouse Strains. Analytical Chemistry. PMID 29481055 DOI: 10.1021/Acs.Analchem.7B04108  0.637
2018 Aebersold R, Agar JN, Amster IJ, Baker MS, Bertozzi CR, Boja ES, Costello CE, Cravatt BF, Fenselau C, Garcia BA, Ge Y, Gunawardena J, Hendrickson RC, Hergenrother PJ, Huber CG, ... ... Patrie SM, et al. How many human proteoforms are there? Nature Chemical Biology. 14: 206-214. PMID 29443976 DOI: 10.1038/Nchembio.2576  0.786
2017 Plymire DA, Wing CE, Robinson DE, Patrie S. Continuous elution proteoform identification of myelin basic protein by superficially porous reversed-phase liquid chromatography and Fourier transform mass spectrometry. Analytical Chemistry. PMID 29016107 DOI: 10.1021/Acs.Analchem.7B02426  0.631
2016 Patrie SM. Top-Down Mass Spectrometry: Proteomics to Proteoforms. Advances in Experimental Medicine and Biology. 919: 171-200. PMID 27975217 DOI: 10.1007/978-3-319-41448-5_8  0.597
2015 Clark L, Zahm JA, Ali R, Kukula M, Bian L, Patrie SM, Gardner KH, Rosen MK, Rosenbaum DM. Methyl labeling and TROSY NMR spectroscopy of proteins expressed in the eukaryote Pichia pastoris. Journal of Biomolecular Nmr. 62: 239-45. PMID 26025061 DOI: 10.1007/S10858-015-9939-2  0.41
2014 Zhang J, Corbett JR, Plymire DA, Greenberg BM, Patrie SM. Proteoform analysis of lipocalin-type prostaglandin D-synthase from human cerebrospinal fluid by isoelectric focusing and superficially porous liquid chromatography with Fourier transform mass spectrometry. Proteomics. 14: 1223-31. PMID 24678018 DOI: 10.1002/Pmic.201300368  0.44
2013 Patrie SM, Roth MJ, Plymire DA, Maresh E, Zhang J. Measurement of blood protease kinetic parameters with self-assembled monolayer ligand binding assays and label-free MALDI-TOF MS. Analytical Chemistry. 85: 10597-604. PMID 24107006 DOI: 10.1021/Ac402739Z  0.56
2013 Zhang J, Roth MJ, Chang AN, Plymire DA, Corbett JR, Greenberg BM, Patrie SM. Top-down mass spectrometry on tissue extracts and biofluids with isoelectric focusing and superficially porous silica liquid chromatography. Analytical Chemistry. 85: 10377-84. PMID 24074297 DOI: 10.1021/Ac402394W  0.692
2013 Burnaevskiy N, Fox TG, Plymire DA, Ertelt JM, Weigele BA, Selyunin AS, Way SS, Patrie SM, Alto NM. Proteolytic elimination of N-myristoyl modifications by the Shigella virulence factor IpaJ. Nature. 496: 106-9. PMID 23535599 DOI: 10.1038/Nature12004  0.481
2013 Patrie SM, Roth MJ, Kohler JJ. Introduction to glycosylation and mass spectrometry. Methods in Molecular Biology (Clifton, N.J.). 951: 1-17. PMID 23296520 DOI: 10.1007/978-1-62703-146-2_1  0.617
2013 Roth MJ, Maresh EM, Plymire DA, Zhang J, Corbett JR, Robbins R, Patrie SM. Surface preparation strategies for improved parallelization and reproducible MALDI-TOF MS ligand binding assays. Acs Applied Materials & Interfaces. 5: 6-10. PMID 23249094 DOI: 10.1021/Am3024756  0.566
2013 Patrie SM, Roth MJ, Zhang J. Top-Down Mass Spectrometry for Protein Molecular Diagnostics and Biomarker Discovery Proteomic and Metabolomic Approaches to Biomarker Discovery. 313-332. DOI: 10.1016/B978-0-12-394446-7.00020-0  0.591
2013 Kohler JJ, Patrie SM. Preface to mass spectrometry of glycoproteins Methods in Molecular Biology. 951: v-vi.  0.341
2012 Roth MJ, Kim J, Maresh EM, Plymire DA, Corbett JR, Zhang J, Patrie SM. MS-based ligand binding assays with speed, sensitivity, and specificity. Proteomics. 12: 3143-6. PMID 22965683 DOI: 10.1002/Pmic.201200151  0.601
2012 Roth MJ, Kim J, Maresh EM, Plymire DA, Corbett JR, Zhang J, Patrie SM. Thin-layer matrix sublimation with vapor-sorption induced co-crystallization for sensitive and reproducible SAMDI-TOF MS analysis of protein biosensors. Journal of the American Society For Mass Spectrometry. 23: 1661-9. PMID 22847391 DOI: 10.1007/S13361-012-0442-7  0.564
2011 Roth MJ, Plymire DA, Chang AN, Kim J, Maresh EM, Larson SE, Patrie SM. Sensitive and reproducible intact mass analysis of complex protein mixtures with superficially porous capillary reversed-phase liquid chromatography mass spectrometry. Analytical Chemistry. 83: 9586-92. PMID 22017354 DOI: 10.1021/Ac202339X  0.673
2007 Patrie SM, Mrksich M. Self-assembled monolayers for MALDI-TOF mass spectrometry for immunoassays of human protein antigens Analytical Chemistry. 79: 5878-5887. PMID 17602570 DOI: 10.1021/Ac0701738  0.521
2006 Patrie SM, Ferguson JT, Robinson DE, Whipple D, Rother M, Metcalf WW, Kelleher NL. Top down mass spectrometry of < 60-kDa proteins from Methanosarcina acetivorans using quadrupole FRMS with automated octopole collisionally activated dissociation. Molecular & Cellular Proteomics : McP. 5: 14-25. PMID 16236702 DOI: 10.1074/Mcp.M500219-Mcp200  0.81
2004 Du Y, Meng F, Patrie SM, Miller LM, Kelleher NL. Improved molecular weight-based processing of intact proteins for interrogation by quadrupole-enhanced FT MS/MS. Journal of Proteome Research. 3: 801-6. PMID 15359734 DOI: 10.1021/Pr0499489  0.813
2004 Patrie SM, Charlebois JP, Whipple D, Kelleher NL, Hendrickson CL, Quinn JP, Marshall AG, Mukhopadhyay B. Construction of a hybrid quadrupole/Fourier transform ion cyclotron resonance mass spectrometer for versatile MS/MS above 10 kDa. Journal of the American Society For Mass Spectrometry. 15: 1099-108. PMID 15234368 DOI: 10.1016/J.Jasms.2004.04.031  0.647
2004 Meng F, Du Y, Miller LM, Patrie SM, Robinson DE, Kelleher NL. Molecular-level description of proteins from saccharomyces cerevisiae using quadrupole FT hybrid mass spectrometry for top down proteomics. Analytical Chemistry. 76: 2852-8. PMID 15144197 DOI: 10.1021/Ac0354903  0.811
2004 Forbes AJ, Patrie SM, Taylor GK, Kim YB, Jiang L, Kelleher NL. Targeted analysis and discovery of posttranslational modifications in proteins from methanogenic archaea by top-down MS. Proceedings of the National Academy of Sciences of the United States of America. 101: 2678-83. PMID 14976258 DOI: 10.1073/Pnas.0306575101  0.806
2004 Patrie SM, Robinson DE, Meng F, Du Y, Kelleher NL. Strategies for automating top-down protein analysis with Q-FTICR MS International Journal of Mass Spectrometry. 234: 175-184. DOI: 10.1016/J.Ijms.2004.02.020  0.809
2003 Charlebois JP, Patrie SM, Kelleher NL. Electron capture dissociation and 13C,15N depletion for deuterium localization in intact proteins after solution-phase exchange. Analytical Chemistry. 75: 3263-6. PMID 12964778 DOI: 10.1021/Ac020690K  0.605
2002 Meng F, Cargile BJ, Patrie SM, Johnson JR, McLoughlin SM, Kelleher NL. Processing complex mixtures of intact proteins for direct analysis by mass spectrometry. Analytical Chemistry. 74: 2923-9. PMID 12141648 DOI: 10.1021/Ac020049I  0.783
2002 Kelleher NL, Patrie S, Johnson JR, Meng F, Forbes AJ. Electron capture dissociation for robust production of sequence tags from eukaryotic proteins Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 101-102.  0.606
2002 Patrie SM, Charlebois J, Vander Molen D, Meng F, Forbes A, Quinn JP, Hendrickson CL, Marshall AG, Kelleher NL. Strategies for top-down proteomics of Methanococcus jannaschii and Saccharomyces cerevisiae using a quadrupole FT-ICR-MS Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 687-688.  0.662
2002 Forbes AJ, Johnson JR, Patrie SM, Kelleher NL. A platform for high-throughput identification and characterization of intact proteins from Methanococcus jannaschii Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 239-240.  0.606
2002 Meng F, Cargile BJ, Patrie SM, Johnson JR, Corso TN, Mcloughlin SM, Kelleher NL. Processing complex mixtures of yeast proteins for direct fragmentation in a quadrupole-FTMS hybrid Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 49-50.  0.751
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