| Year |
Citation |
Score |
| 2024 |
Cantarella S, Vezzoli M, Carnevali D, Morselli M, Zemke NR, Montanini B, Daussy CF, Wodrich H, Teichmann M, Pellegrini M, Berk AJ, Dieci G, Ferrari R. Adenovirus small E1A directs activation of Alu transcription at YAP/TEAD- and AP-1-bound enhancers through interactions with the EP400 chromatin remodeler. Nucleic Acids Research. PMID 39011896 DOI: 10.1093/nar/gkae615 |
0.307 |
|
| 2023 |
Zemke NR, Hsu E, Barshop WD, Sha J, Wohlschlegel JA, Berk AJ. Adenovirus E1A binding to DCAF10 targets proteasomal degradation of RUVBL1/2 AAA+ ATPases required for quaternary assembly of multiprotein machines, innate immunity, and responses to metabolic stress. Journal of Virology. e0099323. PMID 37962355 DOI: 10.1128/jvi.00993-23 |
0.361 |
|
| 2019 |
Zemke NR, Gou D, Berk AJ. Dedifferentiation by adenovirus E1A due to inactivation of Hippo pathway effectors YAP and TAZ. Genes & Development. PMID 31171701 DOI: 10.1101/Gad.324814.119 |
0.399 |
|
| 2019 |
Ando H, Sato T, Ito T, Yamamoto J, Sakamoto S, Nitta N, Asatsuma-Okumura T, Shimizu N, Mizushima R, Aoki I, Imai T, Yamaguchi Y, Berk AJ, Handa H. Cereblon Control of Zebrafish Brain Size by Regulation of Neural Stem Cell Proliferation. Iscience. 15: 95-108. PMID 31055217 DOI: 10.1016/J.Isci.2019.04.007 |
0.437 |
|
| 2018 |
Hsu E, Pennella MA, Zemke NR, Eng C, Berk AJ. Adenovirus E1A Activation Domain Regulates H3 Acetylation Affecting Varied Steps in Transcription at Different Viral Promoters. Journal of Virology. PMID 29976669 DOI: 10.1128/Jvi.00805-18 |
0.424 |
|
| 2018 |
Nava M, Amobi N, Zemke N, Berk A, Farias-Eisner R, Vadgama J, Wu Y. Abstract B68: EGFR signaling mediated modulation of transcription and probable crosstalk with components of Wnt signaling Cancer Epidemiology, Biomarkers & Prevention. 27. DOI: 10.1158/1538-7755.Disp17-B68 |
0.607 |
|
| 2017 |
Zemke NR, Berk AJ. The Adenovirus E1A C Terminus Suppresses a Delayed Antiviral Response and Modulates RAS Signaling. Cell Host & Microbe. 22: 789-800.e5. PMID 29241042 DOI: 10.1016/J.Chom.2017.11.008 |
0.387 |
|
| 2014 |
Ferrari R, Gou D, Jawdekar G, Johnson SA, Nava M, Su T, Yousef AF, Zemke NR, Pellegrini M, Kurdistani SK, Berk AJ. Adenovirus small E1A employs the lysine acetylases p300/CBP and tumor suppressor Rb to repress select host genes and promote productive virus infection. Cell Host & Microbe. 16: 663-76. PMID 25525796 DOI: 10.1016/J.Chom.2014.10.004 |
0.633 |
|
| 2013 |
Gallaher SD, Berk AJ. A rapid Q-PCR titration protocol for adenovirus and helper-dependent adenovirus vectors that produces biologically relevant results. Journal of Virological Methods. 192: 28-38. PMID 23624118 DOI: 10.1016/J.Jviromet.2013.04.013 |
0.73 |
|
| 2012 |
Berk AJ. Yin and yang of mediator function revealed by human mutants. Proceedings of the National Academy of Sciences of the United States of America. 109: 19519-20. PMID 23184968 DOI: 10.1073/Pnas.1217267109 |
0.425 |
|
| 2012 |
Ferrari R, Su T, Li B, Bonora G, Oberai A, Chan Y, Sasidharan R, Berk AJ, Pellegrini M, Kurdistani SK. Reorganization of the host epigenome by a viral oncogene. Genome Research. 22: 1212-21. PMID 22499665 DOI: 10.1101/Gr.132308.111 |
0.419 |
|
| 2012 |
Kawamata N, Pennella MA, Woo JL, Berk AJ, Koeffler HP. Dominant-negative mechanism of leukemogenic PAX5 fusions. Oncogene. 31: 966-77. PMID 21765475 DOI: 10.1038/Onc.2011.291 |
0.652 |
|
| 2011 |
Enomoto T, Kukimoto I, Kawano MA, Yamaguchi Y, Berk AJ, Handa H. In vitro reconstitution of SV40 particles that are composed of VP1/2/3 capsid proteins and nucleosomal DNA and direct efficient gene transfer. Virology. 420: 1-9. PMID 21917285 DOI: 10.1016/J.Virol.2011.08.014 |
0.524 |
|
| 2010 |
Pennella MA, Liu Y, Woo JL, Kim CA, Berk AJ. Adenovirus E1B 55-kilodalton protein is a p53-SUMO1 E3 ligase that represses p53 and stimulates its nuclear export through interactions with promyelocytic leukemia nuclear bodies. Journal of Virology. 84: 12210-25. PMID 20861261 DOI: 10.1128/Jvi.01442-10 |
0.601 |
|
| 2010 |
Gil JS, Gallaher SD, Berk AJ. Delivery of an EBV episome by a self-circularizing helper-dependent adenovirus: long-term transgene expression in immunocompetent mice. Gene Therapy. 17: 1288-93. PMID 20463755 DOI: 10.1038/Gt.2010.75 |
0.798 |
|
| 2010 |
Kawamata N, Pennella M, Woo J, Berk A, Koeffler HP. Dominant Negative Form of PAX5 Is Generated by Multimerization of Its DNA Binding Domain Blood. 116: 25-25. DOI: 10.1182/Blood.V116.21.25.25 |
0.374 |
|
| 2009 |
Wang W, Huang L, Huang Y, Yin JW, Berk AJ, Friedman JM, Wang G. Mediator MED23 links insulin signaling to the adipogenesis transcription cascade. Developmental Cell. 16: 764-71. PMID 19460352 DOI: 10.1016/J.Devcel.2009.04.006 |
0.344 |
|
| 2009 |
Balamotis MA, Pennella MA, Stevens JL, Wasylyk B, Belmont AS, Berk AJ. Complexity in transcription control at the activation domain-mediator interface. Science Signaling. 2: ra20. PMID 19417216 DOI: 10.1126/Scisignal.1164302 |
0.808 |
|
| 2009 |
Ferrari R, Berk AJ, Kurdistani SK. Viral manipulation of the host epigenome for oncogenic transformation. Nature Reviews. Genetics. 10: 290-4. PMID 19290008 DOI: 10.1038/Nrg2539 |
0.304 |
|
| 2009 |
Gallaher SD, Gil JS, Dorigo O, Berk AJ. Robust in vivo transduction of a genetically stable Epstein-Barr virus episome to hepatocytes in mice by a hybrid viral vector. Journal of Virology. 83: 3249-57. PMID 19158239 DOI: 10.1128/Jvi.01721-08 |
0.799 |
|
| 2009 |
Balamotis MA, Pennella MA, Stevens JL, Wasylyk B, Belmont AS, Berk AJ. Erratum: Complexity in transcription control at the activation domain-mediator interface (Science Signaling (2009) 89 (er8)) Science Signaling. 2. DOI: 10.1126/Scisignal.289Er8 |
0.767 |
|
| 2008 |
Ferrari R, Pellegrini M, Horwitz GA, Xie W, Berk AJ, Kurdistani SK. Epigenetic reprogramming by adenovirus e1a. Science (New York, N.Y.). 321: 1086-8. PMID 18719284 DOI: 10.1126/Science.1155546 |
0.42 |
|
| 2008 |
Horwitz GA, Zhang K, McBrian MA, Grunstein M, Kurdistani SK, Berk AJ. Adenovirus small e1a alters global patterns of histone modification. Science (New York, N.Y.). 321: 1084-5. PMID 18719283 DOI: 10.1126/Science.1155544 |
0.382 |
|
| 2007 |
Woo JL, Berk AJ. Adenovirus ubiquitin-protein ligase stimulates viral late mRNA nuclear export. Journal of Virology. 81: 575-87. PMID 17079297 DOI: 10.1128/Jvi.01725-06 |
0.664 |
|
| 2006 |
Schwarz J, Schwarz SC, Dorigo O, Stützer A, Wegner F, Labarca C, Deshpande P, Gil JS, Berk AJ, Lester HA. Enhanced expression of hypersensitive alpha4* nAChR in adult mice increases the loss of midbrain dopaminergic neurons. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 20: 935-46. PMID 16675851 DOI: 10.1096/Fj.05-5497Com |
0.772 |
|
| 2006 |
Gil JS, Gallaher SD, Berk AJ. 848. Helper Dependent Adenovirus-Epstein- Barr Virus Hybrid Vector for Long Term Persistance in Hepatocytes Molecular Therapy. 13: S327. DOI: 10.1016/J.Ymthe.2006.08.934 |
0.801 |
|
| 2006 |
Gallaher SD, Gil JS, Berk AJ. 14. High Efficiency and Long-Term Persistence In Vivo from a Helper Dependent Adenovirus/Epstein-Barr Virus Hybrid Vector Molecular Therapy. 13: S6. DOI: 10.1016/J.Ymthe.2006.08.025 |
0.81 |
|
| 2005 |
Berk AJ. Recent lessons in gene expression, cell cycle control, and cell biology from adenovirus. Oncogene. 24: 7673-85. PMID 16299528 DOI: 10.1038/Sj.Onc.1209040 |
0.484 |
|
| 2005 |
Liu Y, Shevchenko A, Shevchenko A, Berk AJ. Adenovirus exploits the cellular aggresome response to accelerate inactivation of the MRN complex. Journal of Virology. 79: 14004-16. PMID 16254336 DOI: 10.1128/Jvi.79.22.14004-14016.2005 |
0.409 |
|
| 2005 |
Yue Q, Groszer M, Gil JS, Berk AJ, Messing A, Wu H, Liu X. PTEN deletion in Bergmann glia leads to premature differentiation and affects laminar organization. Development (Cambridge, England). 132: 3281-91. PMID 15944184 DOI: 10.1242/Dev.01891 |
0.732 |
|
| 2005 |
Wang G, Balamotis MA, Stevens JL, Yamaguchi Y, Handa H, Berk AJ. Mediator requirement for both recruitment and postrecruitment steps in transcription initiation. Molecular Cell. 17: 683-94. PMID 15749018 DOI: 10.1016/J.Molcel.2005.02.010 |
0.788 |
|
| 2005 |
Gil JS, Gallaher SD, Dorigo O, Berk AJ. 890. Development of a Single Vector System for Gene Delivery Via Hybrid Helper Dependent Adenovirus - Epstein-Barr Virus Vector for Long Term Persistance Molecular Therapy. 11. DOI: 10.1016/J.Ymthe.2005.07.433 |
0.792 |
|
| 2005 |
Gallaher SD, Gil JS, Dorigo O, Berk AJ. 874. Long-Term Transgene Expression In Vivo from a Helper Dependent Adenovirus|[mdash]|Epstein-Barr Virus Hybrid Vector Molecular Therapy. 11. DOI: 10.1016/J.Ymthe.2005.07.417 |
0.812 |
|
| 2004 |
Fang L, Stevens JL, Berk AJ, Spindler KR. Requirement of Sur2 for efficient replication of mouse adenovirus type 1. Journal of Virology. 78: 12888-900. PMID 15542641 DOI: 10.1128/Jvi.78.23.12888-12900.2004 |
0.673 |
|
| 2004 |
Bourbon HM, Aguilera A, Ansari AZ, Asturias FJ, Berk AJ, Bjorklund S, Blackwell TK, Borggrefe T, Carey M, Carlson M, Conaway JW, Conaway RC, Emmons SW, Fondell JD, Freedman LP, et al. A unified nomenclature for protein subunits of mediator complexes linking transcriptional regulators to RNA polymerase II. Molecular Cell. 14: 553-7. PMID 15175151 DOI: 10.1016/J.Molcel.2004.05.011 |
0.351 |
|
| 2004 |
Dorigo O, Gil JS, Gallaher SD, Tan BT, Castro MG, Lowenstein PR, Calos MP, Berk AJ. Development of a novel helper-dependent adenovirus-Epstein-Barr virus hybrid system for the stable transformation of mammalian cells. Journal of Virology. 78: 6556-66. PMID 15163748 DOI: 10.1128/Jvi.78.12.6556-6566.2004 |
0.801 |
|
| 2004 |
Gallaher SD, Gil JS, Dorigo O, Berk AJ. 773. Non-Invasive In Vivo Detection of Episomes Delivered to Mouse Hepatocytes by a Helper Dependent Adenovirus- Epstein-Barr Virus Hybrid Vector System Molecular Therapy. 9. DOI: 10.1016/J.Ymthe.2004.06.697 |
0.809 |
|
| 2003 |
Schröder O, Bryant GO, Geiduschek EP, Berk AJ, Kassavetis GA. A common site on TBP for transcription by RNA polymerases II and III Embo Journal. 22: 5115-5124. PMID 14517249 DOI: 10.1093/Emboj/Cdg476 |
0.384 |
|
| 2003 |
Cantin GT, Stevens JL, Berk AJ. Activation domain-mediator interactions promote transcription preinitiation complex assembly on promoter DNA. Proceedings of the National Academy of Sciences of the United States of America. 100: 12003-8. PMID 14506297 DOI: 10.1073/Pnas.2035253100 |
0.802 |
|
| 2002 |
Harada JN, Shevchenko A, Shevchenko A, Pallas DC, Berk AJ. Analysis of the adenovirus E1B-55K-anchored proteome reveals its link to ubiquitination machinery. Journal of Virology. 76: 9194-206. PMID 12186903 DOI: 10.1128/Jvi.76.18.9194-9206.2002 |
0.776 |
|
| 2002 |
Wang G, Berk AJ. In vivo association of adenovirus large E1A protein with the human mediator complex in adenovirus-infected and -transformed cells. Journal of Virology. 76: 9186-93. PMID 12186902 DOI: 10.1128/Jvi.76.18.9186-9193.2002 |
0.46 |
|
| 2002 |
Stevens JL, Cantin GT, Wang G, Shevchenko A, Shevchenko A, Berk AJ. Transcription control by E1A and MAP kinase pathway via Sur2 mediator subunit. Science (New York, N.Y.). 296: 755-8. PMID 11934987 DOI: 10.1126/Science.1068943 |
0.799 |
|
| 2002 |
Martel LS, Brown HJ, Berk AJ. Evidence that TAF-TATA box-binding protein interactions are required for activated transcription in mammalian cells. Molecular and Cellular Biology. 22: 2788-98. PMID 11909971 DOI: 10.1128/Mcb.22.8.2788-2798.2002 |
0.785 |
|
| 2001 |
Wang G, Cantin GT, Stevens JL, Berk AJ. Characterization of mediator complexes from HeLa cell nuclear extract. Molecular and Cellular Biology. 21: 4604-13. PMID 11416138 DOI: 10.1128/Mcb.21.14.4604-4613.2001 |
0.782 |
|
| 2000 |
Berk AJ. TBP-like factors come into focus Cell. 103: 5-8. PMID 11051541 DOI: 10.1016/S0092-8674(00)00098-2 |
0.409 |
|
| 2000 |
Herschman HR, MacLaren DC, Iyer M, Namavari M, Bobinski K, Green LA, Wu L, Berk AJ, Toyokuni T, Barrio JR, Cherry SR, Phelps ME, Sandgren EP, Gambhir SS. Seeing is believing: non-invasive, quantitative and repetitive imaging of reporter gene expression in living animals, using positron emission tomography. Journal of Neuroscience Research. 59: 699-705. PMID 10700006 DOI: 10.1002/(Sici)1097-4547(20000315)59:6<699::Aid-Jnr1>3.0.Co;2-1 |
0.537 |
|
| 1999 |
MacLaren DC, Gambhir SS, Satyamurthy N, Barrio JR, Sharfstein S, Toyokuni T, Wu L, Berk AJ, Cherry SR, Phelps ME, Herschman HR. Repetitive, non-invasive imaging of the dopamine D2 receptor as a reporter gene in living animals. Gene Therapy. 6: 785-91. PMID 10505102 DOI: 10.1038/Sj.Gt.3300877 |
0.556 |
|
| 1999 |
Tan BT, Wu L, Berk AJ. An adenovirus-Epstein-Barr virus hybrid vector that stably transforms cultured cells with high efficiency Journal of Virology. 73: 7582-7589. PMID 10438848 DOI: 10.1128/Jvi.73.9.7582-7589.1999 |
0.423 |
|
| 1999 |
Berk AJ. Activation of RNA polymerase II transcription Current Opinion in Cell Biology. 11: 330-335. PMID 10395559 DOI: 10.1016/S0955-0674(99)80045-3 |
0.392 |
|
| 1999 |
Harada JN, Berk AJ. p53-Independent and -dependent requirements for E1B-55K in adenovirus type 5 replication. Journal of Virology. 73: 5333-44. PMID 10364280 DOI: 10.1128/Jvi.73.7.5333-5344.1999 |
0.79 |
|
| 1999 |
Boyer TG, Martin MED, Lees E, Ricciardi RP, Berk AJ. Mammalian Srb/mediator complex is targeted by adenovirus E1A protein Nature. 399: 276-279. PMID 10353252 DOI: 10.1038/20466 |
0.471 |
|
| 1999 |
Martin MED, Berk AJ. Corepressor required for adenovirus E1B 55,000-molecular-weight protein repression of basal transcription Molecular and Cellular Biology. 19: 3403-3414. PMID 10207064 DOI: 10.1128/Mcb.19.5.3403 |
0.381 |
|
| 1999 |
Gambhir SS, Barrio JR, Phelps ME, Iyer M, Namavari M, Satyamurthy N, Wu L, Green LA, Bauer E, MacLaren DC, Nguyen K, Berk AJ, Cherry SR, Herschman HR. Imaging adenoviral-directed reporter gene expression in living animals with positron emission tomography. Proceedings of the National Academy of Sciences of the United States of America. 96: 2333-8. PMID 10051642 DOI: 10.1073/Pnas.96.5.2333 |
0.546 |
|
| 1998 |
Berk AJ, Boyer TG, Kapanidis AN, Ebrighit RH, Kobayashi NN, Horn PJ, Sullivan SM, Koop R, Surby MA, Triezenberg SJ. Mechanisms of viral activators Cold Spring Harbor Symposia On Quantitative Biology. 63: 243-252. PMID 10384288 DOI: 10.1101/Sqb.1998.63.243 |
0.377 |
|
| 1998 |
Gambhir SS, Barrio JR, Wu L, Iyer M, Namavari M, Satyamurthy N, Bauer E, Parrish C, MacLaren DC, Borghei AR, Green LA, Sharfstein S, Berk AJ, Cherry SR, Phelps ME, et al. Imaging of adenoviral-directed herpes simplex virus type 1 thymidine kinase reporter gene expression in mice with radiolabeled ganciclovir. Journal of Nuclear Medicine : Official Publication, Society of Nuclear Medicine. 39: 2003-11. PMID 9829598 |
0.534 |
|
| 1998 |
Kobayashi N, Horn PJ, Sullivan SM, Triezenberg SJ, Boyer TG, Berk AJ. DA-complex assembly activity required for VP16C transcriptional activation Molecular and Cellular Biology. 18: 4023-4031. PMID 9632787 DOI: 10.1128/Mcb.18.7.4023 |
0.419 |
|
| 1998 |
Martin MED, Berk AJ. Adenovirus E1B 55K represses p53 activation in vitro Journal of Virology. 72: 3146-3154. PMID 9525640 DOI: 10.1128/Jvi.72.4.3146-3154.1998 |
0.406 |
|
| 1998 |
Shen Y, Kassavetis GA, Bryant GO, Berk AJ. Polymerase (Pol) III TATA box-binding protein (TBP)-associated factor Brf binds to a surface on tbp also required for activated Pol II transcription Molecular and Cellular Biology. 18: 1692-1700. PMID 9488486 DOI: 10.1128/Mcb.18.3.1692 |
0.415 |
|
| 1997 |
Brauner R, Nonoyama M, Laks H, Drinkwater D.C. J, McCaffery S, Drake T, Berk AJ, Sen L, Wu L. Intracoronary adenovirus-mediated transfer of immunosuppressive cytokine genes prolongs allograft survival Journal of Thoracic and Cardiovascular Surgery. 114: 923-933. PMID 9434687 DOI: 10.1016/S0022-5223(97)70006-0 |
0.358 |
|
| 1997 |
Brauner R, Wu L, Laks H, Nonoyama M, Scholl F, Shvarts O, Berk A, Drinkwater DC, Wang JL. Intracoronary gene transfer of immunosuppressive cytokines to cardiac allografts: method and efficacy of adenovirus-mediated transduction. The Journal of Thoracic and Cardiovascular Surgery. 113: 1059-66; discussion . PMID 9202687 DOI: 10.1016/S0022-5223(97)70293-9 |
0.334 |
|
| 1996 |
Bryant GO, Martel LS, Burley SK, Berk AJ. Radical mutations reveal TATA-box binding protein surfaces required for activated transcription in vivo. Genes & Development. 10: 2491-504. PMID 8843200 DOI: 10.1101/Gad.10.19.2491 |
0.788 |
|
| 1996 |
Juo ZS, Chiu TK, Leiberman PM, Baikalov I, Berk AJ, Dickerson RE. How proteins recognize the TATA box. Journal of Molecular Biology. 261: 239-54. PMID 8757291 DOI: 10.1006/Jmbi.1996.0456 |
0.324 |
|
| 1996 |
Shen Y, Igo M, Yalamanchili P, Berk AJ, Dasgupta A. DNA binding domain and subunit interactions of transcription factor IIIC revealed by dissection with poliovirus 3C protease Molecular and Cellular Biology. 16: 4163-4171. PMID 8754815 DOI: 10.1128/Mcb.16.8.4163 |
0.401 |
|
| 1996 |
Wu L, Berk AJ. Modification of adenovirus as gene transfer vector Journal of Investigative Medicine. 44. |
0.376 |
|
| 1995 |
Berk AJ. Biochemistry meets genetics in the holoenzyme Proceedings of the National Academy of Sciences of the United States of America. 92: 11952-11954. PMID 8618821 DOI: 10.1073/Pnas.92.26.11952 |
0.465 |
|
| 1995 |
Martinez E, Zhou Q, L'Etoile ND, Oelgeschläger T, Berk AJ, Roeder RG. Core promoter-specific function of a mutant transcription factor TFIID defective in TATA-box binding Proceedings of the National Academy of Sciences of the United States of America. 92: 11864-11868. PMID 8524864 DOI: 10.1073/Pnas.92.25.11864 |
0.436 |
|
| 1995 |
Kobayashi N, Boyer TG, Berk AJ. A class of activation domains interacts directly with TFIIA and stimulates TFIIA-TFIID-promoter complex assembly Molecular and Cellular Biology. 15: 6465-6473. PMID 7565798 DOI: 10.1128/Mcb.15.11.6465 |
0.302 |
|
| 1994 |
Renee Yew P, Liu X, Berk AJ. Adenovims E1B oncoprotein tethers a transcriptional repression domain to p53 Genes and Development. 8: 190-202. PMID 8299938 DOI: 10.1101/Gad.8.2.190 |
0.401 |
|
| 1994 |
Geisberg JV, Lee WS, Berk AJ, Ricciardi RP. The zinc finger region of the adenovirus E1A transactivating domain complexes with the TATA box binding protein Proceedings of the National Academy of Sciences of the United States of America. 91: 2488-2492. PMID 8146144 DOI: 10.1073/Pnas.91.7.2488 |
0.384 |
|
| 1994 |
L'Etoile ND, Fahnestock ML, Shen Y, Aebersold R, Berk AJ. Human transcription factor IIIC box B binding subunit. Proceedings of the National Academy of Sciences of the United States of America. 91: 1652-6. PMID 8127861 DOI: 10.1073/Pnas.91.5.1652 |
0.444 |
|
| 1994 |
Lieberman PM, Berk AJ. A mechanism for TAFs in transcriptional activation: Activation domain enhancement of TFIID-TFIIA-promoter DNA complex formation Genes and Development. 8: 995-1006. PMID 7926793 DOI: 10.1101/Gad.8.9.995 |
0.442 |
|
| 1993 |
Zhou Q, Boyer TG, Berk AJ. Factors (TAFs) required for activated transcription interact with TATA box-binding protein conserved core domain Genes and Development. 7: 180-187. PMID 8436290 DOI: 10.1101/Gad.7.2.180 |
0.389 |
|
| 1993 |
Clark ME, Lieberman PM, Berk AJ, Dasgupta A. Direct cleavage of human TATA-binding protein by poliovirus protease 3C in vivo and in vitro Molecular and Cellular Biology. 13: 1232-1237. PMID 8380894 DOI: 10.1128/mcb.13.2.1232-1237.1993 |
0.316 |
|
| 1993 |
Boyer TG, Berk AJ. Functional interaction of adenovirus E1A with holo-TFIID Genes and Development. 7: 1810-1823. PMID 8370528 DOI: 10.1101/Gad.7.9.1810 |
0.422 |
|
| 1992 |
Yew PR, Berk AJ. Inhibition of p53 transactivation required for transformation by adenovirus early 1B protein Nature. 357: 82-85. PMID 1533443 DOI: 10.1038/357082A0 |
0.375 |
|
| 1992 |
Zhou Q, Lieberman PM, Boyer TG, Berk AJ. Holo-TFIID supports transcriptional stimulation by diverse activators and from a TATA-less promoter Genes and Development. 6: 1964-1974. PMID 1398073 DOI: 10.1101/Gad.6.10.1964 |
0.445 |
|
| 1991 |
Usuda Y, Kubota A, Berk AJ, Handa H. Affinity purification of transcription factor IIA from HeLa cell nuclear extracts Embo Journal. 10: 2305-2310. PMID 2065666 DOI: 10.1002/J.1460-2075.1991.Tb07767.X |
0.445 |
|
| 1991 |
Lee WS, Kao CC, Bryant GO, Liu X, Berk AJ. Adenovirus E1A activation domain binds the basic repeat in the TATA box transcription factor Cell. 67: 365-376. PMID 1833071 DOI: 10.1016/0092-8674(91)90188-5 |
0.403 |
|
| 1991 |
Lieberman PM, Berk AJ. The Zta trans-activator protein stabilizes TFIID association with promoter DNA by direct protein-protein interaction Genes &Amp; Development. 5: 2441-2454. PMID 1661258 |
0.349 |
|
| 1990 |
Leong K, Lee W, Berk AJ. High-level transcription from the adenovirus major late promoter requires downstream binding sites for late-phase-specific factors Journal of Virology. 64: 51-60. PMID 2293670 DOI: 10.1128/Jvi.64.1.51-60.1990 |
0.385 |
|
| 1990 |
Kao CC, Lieberman PM, Schmidt MC, Zhou Q, Pei R, Berk AJ. Cloning of a transcriptionally active human TATA binding factor. Science (New York, N.Y.). 248: 1646-50. PMID 2194289 DOI: 10.1126/Science.2194289 |
0.408 |
|
| 1990 |
Lieberman PM, Berk AJ. In vitro transcriptional activation, dimerization, and DNA-binding specificity of the Epstein-Barr virus Zta protein Journal of Virology. 64: 2560-2568. PMID 2159531 |
0.375 |
|
| 1990 |
Kao CC, Yew PR, Berk AJ. Domains required for in vitro association between the cellular p53 and the adenovirus 2 E1B 55k proteins Virology. 179: 806-814. PMID 2146804 DOI: 10.1016/0042-6822(90)90148-K |
0.337 |
|
| 1990 |
Yew PR, Cheng Kao C, Berk AJ. Dissection of functional domains in the adenovirus 2 early 1b 55k polypeptide by suppressor-linker insertional mutagenesis Virology. 179: 795-805. PMID 2146803 DOI: 10.1016/0042-6822(90)90147-J |
0.448 |
|
| 1990 |
Smale ST, Schmidt MC, Berk AJ, Baltimore D. Transcriptional activation by Sp1 as directed through TATA or initiator: specific requirement for mammalian transcription factor IID. Proceedings of the National Academy of Sciences of the United States of America. 87: 4509-13. PMID 2141169 DOI: 10.1073/Pnas.87.12.4509 |
0.311 |
|
| 1989 |
Boulanger PA, L'etoile ND, Berk AJ. A DNA-binding domain or human transcription factor IIIC2 Nucleic Acids Research. 17: 7761-7770. PMID 2798126 DOI: 10.1093/Nar/17.19.7761 |
0.402 |
|
| 1989 |
Yoshinaga SK, L'Etoile ND, Berk AJ. Purification and characterization of transcription factor IIIC2 Journal of Biological Chemistry. 264: 10726-10731. PMID 2732244 |
0.305 |
|
| 1989 |
Schmidt MC, Kao CC, Pei R, Berk AJ. Yeast TATA-box transcription factor gene. Proceedings of the National Academy of Sciences of the United States of America. 86: 7785-9. PMID 2682626 DOI: 10.1073/Pnas.86.20.7785 |
0.438 |
|
| 1989 |
Berk AJ. Regulation of eukaryotic transcription factors by post-translational modification Bba - Gene Structure and Expression. 1009: 103-109. PMID 2529903 DOI: 10.1016/0167-4781(89)90087-0 |
0.329 |
|
| 1988 |
Wu L, Berk AJ. Transcriptional activation by the pseudorabies virus immediate early protein requires the TATA box element in the adenovirus 2 E1B promoter Virology. 167: 318-322. PMID 2847423 DOI: 10.1016/0042-6822(88)90089-X |
0.41 |
|
| 1987 |
Dean N, Berk AJ. Separation of TFIIIC into two functional components by sequence specific DNA affinity chromatography Nucleic Acids Research. 15: 9895-9907. PMID 3697084 DOI: 10.1093/Nar/15.23.9895 |
0.413 |
|
| 1987 |
Yoshinaga SK, Boulanger PA, Berk AJ. Resolution of human transcription factor TFIIIC into two functional components Proceedings of the National Academy of Sciences of the United States of America. 84: 3585-3589. PMID 3473469 DOI: 10.1073/Pnas.84.11.3585 |
0.433 |
|
| 1987 |
Wu L, Rosser DS, Schmidt MC, Berk A. A TATA box implicated in E1A transcriptional activation of a simple adenovirus 2 promoter. Nature. 326: 512-5. PMID 2951598 DOI: 10.1038/326512A0 |
0.413 |
|
| 1987 |
Barker DD, Berk AJ. Adenovirus proteins from both E1B reading frames are required for transformation of rodent cells by viral infection and DNA transfection Virology. 156: 107-121. PMID 2949421 DOI: 10.1016/0042-6822(87)90441-7 |
0.408 |
|
| 1987 |
Fradkin LG, Yoshinaga SK, Berk AJ, Dasgupta A. Inhibition of host cell RNA polymerase III-mediated transcription by poliovirus: inactivation of specific transcription factors Molecular and Cellular Biology. 7: 3880-3887. PMID 2828918 DOI: 10.1128/Mcb.7.11.3880 |
0.355 |
|
| 1986 |
Berk AJ. Functions of adenovirus E1A Cancer Surveys. 5: 367-387. PMID 2946406 |
0.362 |
|
| 1986 |
Leong K, Berk AJ. Adenovirus early region 1A protein increases the number of template molecules transcribed in cell-free extracts Proceedings of the National Academy of Sciences of the United States of America. 83: 5844-5848. PMID 2942942 |
0.344 |
|
| 1986 |
Tsukamoto AS, Ponticelli A, Berk AJ, Gaynor RB. Genetic mapping of a major site of phosphorylation in adenovirus type 2 E1A proteins Journal of Virology. 59: 14-22. PMID 2940374 DOI: 10.1128/Jvi.59.1.14-22.1986 |
0.411 |
|
| 1986 |
Yoshinaga S, Dean N, Han M, Berk AJ. Adenovirus stimulation of transcription by RNA polymerase III: evidence for an E1A-dependent increase in transcription factor IIIC concentration The Embo Journal. 5: 343-354. PMID 2940084 DOI: 10.1002/J.1460-2075.1986.Tb04218.X |
0.451 |
|
| 1985 |
Spindler KR, Eng CY, Berk AJ. An adenovirus early region 1A protein is required for maximal viral DNA replication in growth-arrested human cells Journal of Virology. 53: 742-750. PMID 3973965 DOI: 10.1128/Jvi.53.3.742-750.1985 |
0.411 |
|
| 1985 |
Fradkin LG, Leong K, Morrow CD, Berk AJ, Dasgupta A. Primer-dependent eukaryotic RNA polymerase capable of accurate transcription from the adenovirus major late promoter in a reconstituted system Proceedings of the National Academy of Sciences of the United States of America. 82: 7979-7983. PMID 3865210 DOI: 10.1073/Pnas.82.23.7979 |
0.347 |
|
| 1985 |
Gaynor RB, Feldman LT, Berk AJ. Transcription of class III genes activated by viral immediate early proteins Science. 230: 447-450. PMID 2996135 |
0.319 |
|
| 1984 |
Montell C, Courtois G, Eng C, Berk A. Complete transformation by adenovirus 2 requires both E1A proteins. Cell. 36: 951-61. PMID 6705049 DOI: 10.1016/0092-8674(84)90045-X |
0.349 |
|
| 1984 |
Spindler KR, Rosser DSE, Berk AJ. Analysis of adenovirus transforming proteins from early regions 1A and 1B with antisera to inducible fusion antigens produced in Escherichia coli Journal of Virology. 49: 132-141. PMID 6361277 DOI: 10.1128/Jvi.49.1.132-141.1984 |
0.351 |
|
| 1984 |
Osborne TF, Arvidson DN, Tyau ES, Dunsworth-Browne M, Berk AJ. Transcription control region within the protein-coding portion of adenovirus E1A genes Molecular and Cellular Biology. 4: 1293-1305. PMID 6334230 DOI: 10.1128/Mcb.4.7.1293 |
0.397 |
|
| 1984 |
Spindler KR, Berk AJ. Rapid intracellular turnover of adenovirus 5 early region 1A proteins Journal of Virology. 52: 706-710. PMID 6333516 DOI: 10.1128/Jvi.52.2.706-710.1984 |
0.355 |
|
| 1984 |
Gaynor RB, Hillman D, Berk AJ. Adenovirus early region 1A protein activates transcription of a nonviral gene introduced into mammalian cells by infection or transfection Proceedings of the National Academy of Sciences of the United States of America. 81: 1193-1197. PMID 6199792 |
0.384 |
|
| 1983 |
Gaynor RB, Berk AJ. Cis-acting induction of adenovirus transcription Cell. 33: 683-693. PMID 6871990 DOI: 10.1016/0092-8674(83)90011-9 |
0.438 |
|
| 1983 |
Osborne TF, Berk AJ. Far upstream initiation sites for adenovirus early region 1A transcription are utilized after the onset of viral DNA replication Journal of Virology. 45: 594-599. PMID 6834469 |
0.3 |
|
| 1982 |
Gaynor RB, Tsukamoto A, Montell C, Berk AJ. Enhanced expression of adenovirus transforming proteins. Journal of Virology. 44: 276-85. PMID 7143568 DOI: 10.1128/Jvi.44.1.276-285.1982 |
0.373 |
|
| 1982 |
Osborne TF, Gaynor RB, Berk AJ. The TATA homology and the mRNA 5′ untranslated sequence are not required for expression of essential adenovirus E1A functions Cell. 29: 139-148. PMID 7105179 DOI: 10.1016/0092-8674(82)90098-8 |
0.413 |
|
| 1982 |
Montell C, Fisher EF, Caruthers MH, Berk AJ. Resolving the functions of overlapping viral genes by site-specific mutagenesis at a mRNA splice site. Nature. 295: 380-4. PMID 7057903 DOI: 10.1038/295380A0 |
0.417 |
|
| 1981 |
Osborne TF, Schell RE, Burch-Jaffe E, Berget SJ, Berk AJ. Mapping a eukaryotic promoter: A DNA sequence required for in vivo expression of adenovirus pre-early functions Proceedings of the National Academy of Sciences of the United States of America. 78: 1381-1385. PMID 6262792 DOI: 10.1073/Pnas.78.3.1381 |
0.358 |
|
| 1980 |
Dunsworth-Browne M, Schell RE, Berk AJ. Adenovirus terminal protein protects single stranded DNA from digestion by a cellular exonuclease Nucleic Acids Research. 8: 543-554. PMID 6255444 DOI: 10.1093/Nar/8.3.543 |
0.371 |
|
| 1980 |
Sharp PA, Berk AJ, Berget SM. [69] Transcription maps of adenovirus Methods in Enzymology. 65: 750-768. PMID 6246372 DOI: 10.1016/S0076-6879(80)65071-X |
0.516 |
|
| 1979 |
Berk AJ, Lee F, Harrison T, Williams J, Sharp PA. Phenotypes of adenovirus-5 host-range mutants for early mRNA synthesis Symposia On Quantitative Biology. 44: 429-436. PMID 6933039 DOI: 10.1101/Sqb.1980.044.01.046 |
0.47 |
|
| 1979 |
Berk AJ, Lee F, Harrison T, Williams J, Sharp PA. Pre-early adenovirus 5 gene product regulates synthesis of early viral messenger RNAs Cell. 17: 935-944. PMID 487437 DOI: 10.1016/0092-8674(79)90333-7 |
0.493 |
|
| 1978 |
Berk AJ, Sharp PA. Structure of the adenovirus 2 early mRNAs Cell. 14: 695-711. PMID 688389 DOI: 10.1016/0092-8674(78)90252-0 |
0.435 |
|
| 1978 |
Berk AJ, Sharp PA. Spliced early mRNAs of simian virus 40 Proceedings of the National Academy of Sciences of the United States of America. 75: 1274-1278. PMID 206891 DOI: 10.1073/Pnas.75.3.1274 |
0.523 |
|
| 1977 |
Berk AJ, Sharp PA. Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids Cell. 12: 721-732. PMID 922889 DOI: 10.1016/0092-8674(77)90272-0 |
0.445 |
|
| 1977 |
Berk AJ, Sharp PA. Ultraviolet mapping of the adenovirus 2 early promoters Cell. 12: 45-55. PMID 902320 DOI: 10.1016/0092-8674(77)90184-2 |
0.487 |
|
| 1977 |
Berget SM, Berk AJ, Harrison T, Sharp PA. Spliced segments at the 5' termini of adenovirus-2 late mRNA: A role for heterogeneous nuclear RNA in mammalian cells Cold Spring Harbor Symposia On Quantitative Biology. 42: 523-529. PMID 277361 DOI: 10.1101/Sqb.1978.042.01.055 |
0.483 |
|
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