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Jan T. Liphardt - Publications

Affiliations: 
2004-2013 Biophysics University of California, Berkeley, Berkeley, CA, United States 
 2013- Bioengineering Stanford University, Palo Alto, CA 
Area:
General Biophysics, Cell Biology
Website:
http://liphardtlab.stanford.edu/jan.html
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38 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Ruijgrok PV, Ghosh RP, Zemsky S, Nakamura M, Gong R, Ning L, Chen R, Vachharajani VT, Chu AE, Anand N, Eguchi RR, Huang PS, Lin MZ, Alushin GM, Liphardt JT, et al. Optical control of fast and processive engineered myosins in vitro and in living cells. Nature Chemical Biology. PMID 33603247 DOI: 10.1038/s41589-021-00740-7  0.623
2019 Ghosh RP, Franklin JM, Draper WE, Shi Q, Beltran B, Spakowitz AJ, Liphardt JT. A fluorogenic array for temporally unlimited single-molecule tracking. Nature Chemical Biology. PMID 30858596 DOI: 10.1038/S41589-019-0241-6  0.313
2019 Ruijgrok PV, Ghosh RP, Nakamura M, Zemsky S, Chen R, Vachharajani V, Liphardt JT, Bryant Z. Optical Control of Fast and Processive Engineered Myosins In Vitro and in Living Cells Biophysical Journal. 116. DOI: 10.1016/J.Bpj.2018.11.1410  0.634
2018 Llorente-Garcia I, Lenn T, Erhardt H, Harriman OL, Liu LN, Robson A, Chiu SW, Matthews S, Willis NJ, Bray CD, Lee SH, Shin JY, Bustamante C, Liphardt J, Friedrich T, et al. Corrigendum to "Single-molecule in vivo imaging of bacterial respiratory complexes indicates delocalized oxidative phosphorylation" [Biochim. Biophys. Acta 1837(6) (2014) 811-824 DOI: 10.1016/j.bbabio.2014.01.020]. Biochimica Et Biophysica Acta. 1859: 164. PMID 29175561 DOI: 10.1016/J.Bbabio.2017.11.005  0.584
2018 Ruijgrok PV, Ghosh RP, Nakamura M, Chen R, Vachharajani V, Liphardt J, Bryant Z. Optical Control of Fast and Processive Engineered Myosins: Optimization and Characterization in Vitro and in Living Cells Biophysical Journal. 114. DOI: 10.1016/J.Bpj.2017.11.1789  0.631
2015 Lowe AR, Tang JH, Yassif J, Graf M, Huang WY, Groves JT, Weis K, Liphardt JT. Importin-β modulates the permeability of the nuclear pore complex in a Ran-dependent manner. Elife. 4. PMID 25748139 DOI: 10.7554/Elife.04052  0.766
2015 Lowe AR, Tang JH, Yassif J, Graf M, Huang WY, Groves JT, Weis K, Liphardt JT. Author response: Importin-β modulates the permeability of the nuclear pore complex in a Ran-dependent manner Elife. DOI: 10.7554/Elife.04052.024  0.753
2014 Llorente-Garcia I, Lenn T, Erhardt H, Harriman OL, Liu LN, Robson A, Chiu SW, Matthews S, Willis NJ, Bray CD, Lee SH, Shin JY, Bustamante C, Liphardt J, Friedrich T, et al. Single-molecule in vivo imaging of bacterial respiratory complexes indicates delocalized oxidative phosphorylation. Biochimica Et Biophysica Acta. 1837: 811-24. PMID 24513194 DOI: 10.1016/J.Bbabio.2014.01.020  0.615
2014 Tang JH, Lowe AR, Yassif J, Graf M, Huang WY, Groves JT, Weis K, Liphardt JT. A Ran-Dependent Importin-Beta/Nup153 Barrier in the Nuclear Pore Complex Biophysical Journal. 106: 312a. DOI: 10.1016/J.Bpj.2013.11.1809  0.748
2013 Nan X, Collisson EA, Lewis S, Huang J, Tamgüney TM, Liphardt JT, McCormick F, Gray JW, Chu S. Single-molecule superresolution imaging allows quantitative analysis of RAF multimer formation and signaling. Proceedings of the National Academy of Sciences of the United States of America. 110: 18519-24. PMID 24158481 DOI: 10.1073/Pnas.1318188110  0.308
2013 Andersen KR, Onischenko E, Tang JH, Kumar P, Chen JZ, Ulrich A, Liphardt JT, Weis K, Schwartz TU. Scaffold nucleoporins Nup188 and Nup192 share structural and functional properties with nuclear transport receptors. Elife. 2: e00745. PMID 23795296 DOI: 10.7554/Elife.00745  0.317
2013 Tang JH, Lowe AR, Yassif JM, Weis K, Liphardt JT. Importin-Beta and Ran Regulate the Passive Permeability Barrier in the Nuclear Pore Complex Biophysical Journal. 104: 120a. DOI: 10.1016/J.Bpj.2012.11.694  0.773
2012 Paszek MJ, DuFort CC, Rubashkin MG, Davidson MW, Thorn KS, Liphardt JT, Weaver VM. Scanning angle interference microscopy reveals cell dynamics at the nanoscale. Nature Methods. 9: 825-7. PMID 22751201 DOI: 10.1038/Nmeth.2077  0.326
2012 Liphardt J. Single molecules: Thermodynamic limits Nature Physics. 8: 638-639. DOI: 10.1038/Nphys2394  0.32
2010 Lowe AR, Siegel JJ, Kalab P, Siu M, Weis K, Liphardt JT. Selectivity mechanism of the nuclear pore complex characterized by single cargo tracking. Nature. 467: 600-3. PMID 20811366 DOI: 10.1016/J.Bpj.2009.12.1119  0.757
2010 McEvoy AL, Greenfield D, Bates M, Liphardt J. Q&A: Single-molecule localization microscopy for biological imaging. Bmc Biology. 8: 106. PMID 20707882 DOI: 10.1186/1741-7007-8-106  0.755
2010 Reinhard BM, Yassif JM, Vach P, Liphardt J. Plasmon rulers as dynamic molecular rulers in enzymology. Methods in Enzymology. 475: 175-98. PMID 20627158 DOI: 10.1016/S0076-6879(10)75008-4  0.77
2010 Walter JM, Greenfield D, Liphardt J. Potential of light-harvesting proton pumps for bioenergy applications. Current Opinion in Biotechnology. 21: 265-70. PMID 20371172 DOI: 10.1016/J.Copbio.2010.03.007  0.75
2010 Lowe AR, Siegel J, Kalab P, Siu M, Weis K, Liphardt JT. A Functional Map of the Nuclear Pore Complex Via High Precision Tracking of Single Molecules Biophysical Journal. 98: 307a-308a. DOI: 10.1016/J.Bpj.2009.12.1672  0.779
2009 Greenfield D, McEvoy AL, Shroff H, Crooks GE, Wingreen NS, Betzig E, Liphardt J. Self-organization of the Escherichia coli chemotaxis network imaged with super-resolution light microscopy. Plos Biology. 7: e1000137. PMID 19547746 DOI: 10.1371/Journal.Pbio.1000137  0.747
2008 Shroff H, Sivak D, Siegel JJ, McEvoy AL, Siu M, Spakowitz A, Geissler PL, Liphardt J. Optical measurement of mechanical forces inside short DNA loops. Biophysical Journal. 94: 2179-86. PMID 18065484 DOI: 10.1529/Biophysj.107.114413  0.745
2008 Radenovic A, Trepagnier E, Csencsits R, Downing KH, Liphardt J. Fabrication of 10 nm diameter hydrocarbon nanopores Applied Physics Letters. 93. DOI: 10.1063/1.3012376  0.748
2007 Liphardt J. The great hunt for extra compliance. Biophysical Journal. 93: 4099. PMID 17766362 DOI: 10.1529/Biophysj.107.117572  0.332
2007 Trepagnier EH, Radenovic A, Sivak D, Geissler P, Liphardt J. Controlling DNA capture and propagation through artificial nanopores Nano Letters. 7: 2824-2830. PMID 17705552 DOI: 10.1021/Nl0714334  0.758
2007 Nakayama Y, Pauzauskie PJ, Radenovic A, Onorato RM, Saykally RJ, Liphardt J, Yang P. Tunable nanowire nonlinear optical probe. Nature. 447: 1098-101. PMID 17597756 DOI: 10.1038/Nature05921  0.331
2007 Reinhard BM, Sheikholeslami S, Mastroianni A, Alivisatos AP, Liphardt J. Use of plasmon coupling to reveal the dynamics of DNA bending and cleavage by single EcoRV restriction enzymes. Proceedings of the National Academy of Sciences of the United States of America. 104: 2667-72. PMID 17307879 DOI: 10.1073/Pnas.0607826104  0.61
2007 Walter JM, Greenfield D, Bustamante C, Liphardt J. Light-powering Escherichia coli with proteorhodopsin Proceedings of the National Academy of Sciences of the United States of America. 104: 2408-2412. PMID 17277079 DOI: 10.1073/Pnas.0611035104  0.743
2006 Pauzauskie PJ, Radenovic A, Trepagnier E, Shroff H, Yang P, Liphardt J. Optical trapping and integration of semiconductor nanowire assemblies in water. Nature Materials. 5: 97-101. PMID 16429143 DOI: 10.1038/Nmat1563  0.76
2005 Reinhard BM, Siu M, Agarwal H, Alivisatos AP, Liphardt J. Calibration of dynamic molecular rulers based on plasmon coupling between gold nanoparticles. Nano Letters. 5: 2246-52. PMID 16277462 DOI: 10.1021/Nl051592S  0.745
2005 Shroff H, Reinhard BM, Siu M, Agarwal H, Spakowitz A, Liphardt J. Biocompatible force sensor with optical readout and dimensions of 6 nm3. Nano Letters. 5: 1509-14. PMID 16178266 DOI: 10.1021/Nl050875H  0.757
2005 Sönnichsen C, Reinhard BM, Liphardt J, Alivisatos AP. A molecular ruler based on plasmon coupling of single gold and silver nanoparticles. Nature Biotechnology. 23: 741-5. PMID 15908940 DOI: 10.1038/Nbt1100  0.582
2005 Bustamante C, Liphardt J, Ritort F. The Nonequilibrium Thermodynamics of Small Systems Physics Today. 58: 43-48. DOI: 10.1063/1.2012462  0.562
2004 Trepagnier EH, Jarzynski C, Ritort F, Crooks GE, Bustamante CJ, Liphardt J. Experimental test of Hatano and Sasa's nonequilibrium steady-state equality. Proceedings of the National Academy of Sciences of the United States of America. 101: 15038-41. PMID 15469914 DOI: 10.1073/Pnas.0406405101  0.735
2003 Onoa B, Dumont S, Liphardt J, Smith SB, Tinoco I, Bustamante C. Identifying kinetic barriers to mechanical unfolding of the T. thermophila ribozyme. Science (New York, N.Y.). 299: 1892-5. PMID 12649482 DOI: 10.1126/Science.1081338  0.776
2002 Liphardt J, Dumont S, Smith SB, Tinoco I, Bustamante C. Equilibrium information from nonequilibrium measurements in an experimental test of Jarzynski's equality. Science (New York, N.Y.). 296: 1832-5. PMID 12052949 DOI: 10.1126/Science.1071152  0.769
2001 Liphardt J, Onoa B, Smith SB, Tinoco I, Bustamante C. Reversible unfolding of single RNA molecules by mechanical force. Science (New York, N.Y.). 292: 733-7. PMID 11326101 DOI: 10.1126/Science.1058498  0.738
2001 Bustamante C, Liphardt J, Onoa B, Smith SB, Collin D, Tinoco I. Unfolding Single RNA Molecules with Optical Tweezers Microscopy and Microanalysis. 7: 26-27. DOI: 10.1017/S1431927600026209  0.73
2000 Bustamante C, Smith SB, Liphardt J, Smith D. Single-molecule studies of DNA mechanics. Current Opinion in Structural Biology. 10: 279-85. PMID 10851197 DOI: 10.1016/S0959-440X(00)00085-3  0.63
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