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Amber M. Smith - Publications

Affiliations: 
2014- Biochemistry and Biophysics University of California, San Francisco, San Francisco, CA 
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17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Pinky L, DeAguero JR, Remien CH, Smith AM. How Interactions during Viral-Viral Coinfection Can Shape Infection Kinetics. Viruses. 15. PMID 37376603 DOI: 10.3390/v15061303  0.335
2023 Pinky L, DeAguero JR, Remien CH, Smith AM. How Interactions During Viral-Viral Coinfection Can Shape Infection Kinetics. Biorxiv : the Preprint Server For Biology. PMID 37066297 DOI: 10.1101/2023.04.05.535744  0.333
2023 Remesh SG, Merz GE, Brilot AF, Chio US, Rizo AN, Pospiech TH, Lui I, Laurie MT, Glasgow J, Le CQ, Zhang Y, Diwanji D, Hernandez E, Lopez J, Mehmood H, ... ... Smith AM, et al. Computational pipeline provides mechanistic understanding of Omicron variant of concern neutralizing engineered ACE2 receptor traps. Structure (London, England : 1993). PMID 36805129 DOI: 10.1016/j.str.2023.01.009  0.313
2022 Remesh SG, Merz GE, Brilot AF, Chio US, Rizo AN, Pospiech TH, Lui I, Laurie MT, Glasgow J, Le CQ, Zhang Y, Diwanji D, Hernandez E, Lopez J, Pawar KI, ... ... Smith AM, et al. Computational pipeline provides mechanistic understanding of Omicron variant of concern neutralizing engineered ACE2 receptor traps. Biorxiv : the Preprint Server For Biology. PMID 35982665 DOI: 10.1101/2022.08.09.503400  0.311
2021 Verba K, Gupta M, Azumaya C, Moritz M, Pourmal S, Diallo A, Merz G, Jang G, Bouhaddou M, Fossati A, Brilot A, Diwanji D, Hernandez E, Herrera N, Kratochvil H, ... ... Smith A, et al. CryoEM and AI reveal a structure of SARS-CoV-2 Nsp2, a multifunctional protein involved in key host processes. Research Square. PMID 34031651 DOI: 10.21203/rs.3.rs-515215/v1  0.665
2021 Gupta M, Azumaya CM, Moritz M, Pourmal S, Diallo A, Merz GE, Jang G, Bouhaddou M, Fossati A, Brilot AF, Diwanji D, Hernandez E, Herrera N, Kratochvil HT, Lam VL, ... ... Smith AM, et al. CryoEM and AI reveal a structure of SARS-CoV-2 Nsp2, a multifunctional protein involved in key host processes. Biorxiv : the Preprint Server For Biology. PMID 34013269 DOI: 10.1101/2021.05.10.443524  0.665
2021 Weinberg ZY, Hilburger CE, Kim M, Cao L, Khalid M, Elmes S, Diwanji D, Hernandez E, Lopez J, Schaefer K, Smith AM, Zhou F, Renuka Kumar G, Ott M, et al. Sentinel cells enable genetic detection of SARS-CoV-2 Spike protein. Biorxiv : the Preprint Server For Biology. PMID 33907743 DOI: 10.1101/2021.04.20.440678  0.313
2020 Schoof M, Faust B, Saunders RA, Sangwan S, Rezelj V, Hoppe N, Boone M, Billesbølle CB, Puchades C, Azumaya CM, Kratochvil HT, Zimanyi M, Deshpande I, Liang J, Dickinson S, ... ... Smith AM, et al. An ultrapotent synthetic nanobody neutralizes SARS-CoV-2 by stabilizing inactive Spike. Science (New York, N.Y.). PMID 33154106 DOI: 10.1126/science.abe3255  0.401
2020 Gordon DE, Hiatt J, Bouhaddou M, Rezelj VV, Ulferts S, Braberg H, Jureka AS, Obernier K, Guo JZ, Batra J, Kaake RM, Weckstein AR, Owens TW, Gupta M, Pourmal S, ... ... Smith AM, et al. Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms. Science (New York, N.Y.). PMID 33060197 DOI: 10.1126/science.abe9403  0.633
2020 Kumar A, Kodidela S, Tadrous E, Cory TJ, Walker CM, Smith AM, Mukherjee A, Kumar S. Extracellular Vesicles in Viral Replication and Pathogenesis and Their Potential Role in Therapeutic Intervention. Viruses. 12. PMID 32823684 DOI: 10.3390/v12080887  0.325
2020 Wang Y, An G, Becker A, Cockrell C, Collier N, Craig M, Davis CL, Faeder J, Versypt ANF, Gianlupi JF, Glazier JA, Heiland R, Hillen T, Islam MA, Jenner A, ... ... Smith AM, et al. Rapid community-driven development of a SARS-CoV-2 tissue simulator. Biorxiv : the Preprint Server For Biology. PMID 32511322 DOI: 10.1101/2020.04.02.019075  0.326
2018 Smith AM. Validated Models of Immune Response to Virus Infection. Current Opinion in Systems Biology. 12: 46-52. PMID 31723715 DOI: 10.1016/j.coisb.2018.10.005  0.332
2018 Smith AM. Host-pathogen kinetics during influenza infection and coinfection: insights from predictive modeling. Immunological Reviews. 285: 97-112. PMID 30129197 DOI: 10.1111/imr.12692  0.317
2018 Binning JM, Smith AM, Hultquist JF, Craik CS, Caretta N, Campbell MG, Burton L, La Greca F, McGregor MJ, Ta HM, Bartholomeeusen K, Peterlin BM, Krogan NJ, Sevillano N, Cheng Y, et al. Fab-based inhibitors reveal ubiquitin independent functions for HIV Vif neutralization of APOBEC3 restriction factors. Plos Pathogens. 14: e1006830. PMID 29304101 DOI: 10.1371/Journal.Ppat.1006830  0.308
2016 Jayaraman B, Smith AM, Fernandes JD, Frankel AD. Oligomeric viral proteins: small in size, large in presence. Critical Reviews in Biochemistry and Molecular Biology. 1-16. PMID 27685368 DOI: 10.1080/10409238.2016.1215406  0.761
2013 Smith AM, Adler FR, Ribeiro RM, Gutenkunst RN, McAuley JL, McCullers JA, Perelson AS. Kinetics of coinfection with influenza A virus and Streptococcus pneumoniae. Plos Pathogens. 9: e1003238. PMID 23555251 DOI: 10.1371/Journal.Ppat.1003238  0.301
2011 Smith AM, Perelson AS. Influenza A virus infection kinetics: quantitative data and models. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. 3: 429-45. PMID 21197654 DOI: 10.1002/wsbm.129  0.316
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