Debashis Sahoo
Affiliations: | University of California, San Diego, La Jolla, CA |
Area:
Bioinformatics, Cancer Systems Biology, Boolean Analysis, Colon Cancer, Prostate Cancer, B-ALLWebsite:
https://profiles.ucsd.edu/debashis.sahooGoogle:
"Debashis Sahoo"Bio:
https://sites.google.com/view/debashis-sahoo/members/principal-investigator
Parents
Sign in to add mentor| David L. Dill | grad student | 2008 | Stanford (Computer Science Tree) | |
| (Boolean analysis of high-throughput biological datasets) | ||||
| Sylvia K. Plevritis | grad student | 2008 | Stanford (MathTree) | |
| (Co-advisor) | ||||
| Joseph Lipsick | post-doc | UCSD (Cell Biology Tree) | ||
| Irving L. Weissman | post-doc | 2009-2014 | Stanford | |
Children
Sign in to add trainee| Jaspreet Kaur | post-doc | 2018- | UCSD |
| Sarah Dabydeen | post-doc | 2015-2017 | UCSD |
BETA: Related publications
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Publications
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| Matsubara J, Li YF, Koul S, et al. (2025) The E2F4 transcriptional repressor is a key mechanistic regulator of colon cancer resistance to (CPT-11). Biorxiv : the Preprint Server For Biology |
| Zage PE, Huo Y, Subramonian D, et al. (2023) Identification of a Novel Gene Signature for Neuroblastoma Differentiation using a Boolean Implication Network. Genes, Chromosomes & Cancer |
| Ambrosi TH, Marecic O, McArdle A, et al. (2021) Aged skeletal stem cells generate an inflammatory degenerative niche. Nature |
| Pezhouman A, Engel JL, Nguyen NB, et al. (2021) Isolation and characterization of hESC-derived heart field-specific cardiomyocytes unravels new insights into their transcriptional and electrophysiological profiles. Cardiovascular Research |
| Campbell CA, Fursova O, Cheng X, et al. (2021) A zebrafish model of granulin deficiency reveals essential roles in myeloid cell differentiation. Blood Advances. 5: 796-811 |
| Espanola SG, Song H, Ryu E, et al. (2020) Haematopoietic stem cell-dependent Notch transcription is mediated by p53 through the Histone chaperone Supt16h. Nature Cell Biology |
| Tal MC, Torrez Dulgeroff LB, Myers L, et al. (2020) Upregulation of CD47 Is a Host Checkpoint Response to Pathogen Recognition. Mbio. 11 |
| Dang D, Taheri S, Das S, et al. (2020) Computational Approach to Identifying Universal Macrophage Biomarkers. Frontiers in Physiology. 11: 275 |
| Mukohyama J, Isobe T, Hu Q, et al. (2019) miR-221 targets QKI to enhance the tumorigenic capacity of human colorectal cancer stem cells. Cancer Research |
| Dabydeen SA, Desai A, Sahoo D. (2019) Unbiased Boolean analysis of public gene expression data for cell cycle gene identification. Molecular Biology of the Cell. mbcE19010013 |