Daniel H. Roston, Ph.D. - Publications

Affiliations: 
Chemistry University of Iowa, Iowa City, IA 
Area:
Enzyme Catalysis

17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Nomura Y, Roston D, Montemayor EJ, Cui Q, Butcher SE. Structural and mechanistic basis for preferential deadenylation of U6 snRNA by Usb1. Nucleic Acids Research. PMID 30215753 DOI: 10.1093/Nar/Gky812  0.305
2018 Roston D, Lu X, Fang D, Demapan D, Cui Q. Analysis of Phosphoryl-Transfer Enzymes with QM/MM Free Energy Simulations. Methods in Enzymology. 607: 53-90. PMID 30149869 DOI: 10.1016/Bs.Mie.2018.05.005  0.449
2017 Lu X, Ovchinnikov V, Demapan D, Roston D, Cui Q. Regulation and Plasticity of Catalysis in Enzymes: Insights from Analysis of Mechanochemical Coupling in Myosin. Biochemistry. PMID 28225609 DOI: 10.1021/Acs.Biochem.7B00016  0.465
2016 Roston D, Cui Q. Substrate and Transition State Binding in Alkaline Phosphatase Analyzed by Computation of Oxygen Isotope Effects. Journal of the American Chemical Society. PMID 27541005 DOI: 10.1021/Jacs.6B07347  0.541
2016 Roston D, Cui Q. QM/MM Analysis of Transition States and Transition State Analogues in Metalloenzymes. Methods in Enzymology. 577: 213-50. PMID 27498640 DOI: 10.1016/Bs.Mie.2016.05.016  0.412
2016 Roston D, Demapan D, Cui Q. Leaving Group Ability Observably Affects Transition State Structure in a Single Enzyme Active Site. Journal of the American Chemical Society. PMID 27186960 DOI: 10.1021/Jacs.6B03156  0.507
2014 Goyal P, Qian HJ, Irle S, Lu X, Roston D, Mori T, Elstner M, Cui Q. Molecular simulation of water and hydration effects in different environments: challenges and developments for DFTB based models. The Journal of Physical Chemistry. B. 118: 11007-27. PMID 25166899 DOI: 10.1021/Jp503372V  0.347
2014 Roston D, Kohen A, Doron D, Major DT. Simulations of remote mutants of dihydrofolate reductase reveal the nature of a network of residues coupled to hydride transfer. Journal of Computational Chemistry. 35: 1411-7. PMID 24798860 DOI: 10.1002/Jcc.23629  0.606
2014 Kashefolgheta S, Razzaghi M, Hammann B, Eilers J, Roston D, Lu Y. Computational replication of the abnormal secondary kinetic isotope effects in a hydride transfer reaction in solution with a motion assisted H-tunneling model. The Journal of Organic Chemistry. 79: 1989-94. PMID 24498946 DOI: 10.1021/Jo402650A  0.481
2014 Roston D, Kohen A. Stereospecific multiple isotopic labeling of benzyl alcohol Journal of Labelled Compounds and Radiopharmaceuticals. 57: 75-77. PMID 24327376 DOI: 10.1002/Jlcr.3143  0.616
2014 Roston D, Islam Z, Kohen A. Kinetic isotope effects as a probe of hydrogen transfers to and from common enzymatic cofactors Archives of Biochemistry and Biophysics. 544: 96-104. PMID 24161942 DOI: 10.1016/J.Abb.2013.10.010  0.661
2013 Roston D, Kohen A. A critical test of the "tunneling and coupled motion" concept in enzymatic alcohol oxidation Journal of the American Chemical Society. 135: 13624-13627. PMID 24020836 DOI: 10.1021/Ja405917M  0.628
2013 Roston D, Islam Z, Kohen A. Isotope effects as probes for enzyme catalyzed hydrogen-transfer reactions Molecules. 18: 5543-5567. PMID 23673528 DOI: 10.3390/Molecules18055543  0.681
2012 Roston D, Cheatum CM, Kohen A. Hydrogen Donor-Acceptor fluctuations from kinetic isotope effects: A phenomenological model Biochemistry. 51: 6860-6870. PMID 22857146 DOI: 10.1021/Bi300613E  0.642
2012 Wang Z, Roston D, Kohen A. Experimental and theoretical studies of enzyme-catalyzed hydrogen-transfer reactions. Advances in Protein Chemistry and Structural Biology. 87: 155-80. PMID 22607755 DOI: 10.1016/B978-0-12-398312-1.00006-8  0.677
2010 Roston D, Kohen A. Elusive transition state of alcohol dehydrogenase unveiled Proceedings of the National Academy of Sciences of the United States of America. 107: 9572-9577. PMID 20457944 DOI: 10.1073/Pnas.1000931107  0.63
2009 Roston D, Kohen A. The Exit of the Tunnel: Yeast Alcohol Dehydrogenase from the Acceptor's Point of View Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.2265  0.646
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