Auinash Kalsotra, Ph.D. - Publications

Affiliations: 
2005 The University of Texas Graduate School of Biomedical Sciences at Houston 
Area:
Molecular Biology, Neuroscience Biology, Pharmacology

36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Seimetz J, Arif W, Bangru S, Hernaez M, Kalsotra A. Cell-type specific polysome profiling from mammalian tissues. Methods (San Diego, Calif.). PMID 30500367 DOI: 10.1016/j.ymeth.2018.11.015  1
2018 Bangru S, Arif W, Seimetz J, Bhate A, Chen J, Rashan EH, Carstens RP, Anakk S, Kalsotra A. Alternative splicing rewires Hippo signaling pathway in hepatocytes to promote liver regeneration. Nature Structural & Molecular Biology. PMID 30250226 DOI: 10.1038/s41594-018-0129-2  1
2018 Jaiswal M, Haelterman NA, Sandoval H, Xiong B, Donti T, Kalsotra A, Yamamoto S, Cooper TA, Graham BH, Bellen HJ. Correction: Impaired Mitochondrial Energy Production Causes Light-Induced Photoreceptor Degeneration Independent of Oxidative Stress. Plos Biology. 16: e1002622. PMID 29509758 DOI: 10.1371/journal.pbio.1002622  1
2017 Liu DC, Seimetz J, Lee KY, Kalsotra A, Chung HJ, Lu H, Tsai NP. Mdm2 mediates FMRP- and Gp1 mGluR-dependent protein translation and neural network activity. Human Molecular Genetics. 26: 3895-3908. PMID 29016848 DOI: 10.1093/hmg/ddx276  1
2017 Aguero T, Jin Z, Chorghade S, Kalsotra A, King ML, Yang J. Maternal dead-end 1 promotes translation of nanos1 through binding the eIF3 complex. Development (Cambridge, England). PMID 28870987 DOI: 10.1242/dev.152611  1
2017 Skariah G, Seimetz J, Norsworthy M, Lannom MC, Kenny PJ, Elrakhawy M, Forsthoefel C, Drnevich J, Kalsotra A, Ceman S. Mov10 suppresses retroelements and regulates neuronal development and function in the developing brain. Bmc Biology. 15: 54. PMID 28662698 DOI: 10.1186/s12915-017-0387-1  1
2017 Chorghade S, Seimetz J, Emmons R, Yang J, Bresson SM, Lisio M, Parise G, Conrad NK, Kalsotra A. Poly(A) tail length regulates PABPC1 expression to tune translation in the heart. Elife. 6. PMID 28653618 DOI: 10.7554/eLife.24139  1
2017 Arif W, Datar G, Kalsotra A. Intersections of Post-Transcriptional Gene Regulatory Mechanisms with Intermediary Metabolism. Biochimica Et Biophysica Acta. PMID 28088440 DOI: 10.1016/j.bbagrm.2017.01.004  1
2016 Bangru S, Kalsotra A. Advances in analyzing RNA diversity in eukaryotic transcriptomes: peering through the Omics lens. F1000research. 5: 2668. PMID 27909578 DOI: 10.12688/f1000research.9511.1  1
2015 Bhate A, Parker DJ, Bebee TW, Ahn J, Arif W, Rashan EH, Chorghade S, Chau A, Lee JH, Anakk S, Carstens RP, Xiao X, Kalsotra A. ESRP2 controls an adult splicing programme in hepatocytes to support postnatal liver maturation. Nature Communications. 6: 8768. PMID 26531099 DOI: 10.1038/ncomms9768  1
2015 Jaiswal M, Haelterman NA, Sandoval H, Xiong B, Donti T, Kalsotra A, Yamamoto S, Cooper TA, Graham BH, Bellen HJ. Impaired Mitochondrial Energy Production Causes Light-Induced Photoreceptor Degeneration Independent of Oxidative Stress. Plos Biology. 13: e1002197. PMID 26176594 DOI: 10.1371/journal.pbio.1002197  1
2015 Li W, You B, Hoque M, Zheng D, Luo W, Ji Z, Park JY, Gunderson SI, Kalsotra A, Manley JL, Tian B. Systematic profiling of poly(A)+ transcripts modulated by core 3' end processing and splicing factors reveals regulatory rules of alternative cleavage and polyadenylation. Plos Genetics. 11: e1005166. PMID 25906188 DOI: 10.1371/journal.pgen.1005166  1
2015 Chaturvedi P, Neelamraju Y, Arif W, Kalsotra A, Janga SC. Uncovering RNA binding proteins associated with age and gender during liver maturation. Scientific Reports. 5: 9512. PMID 25824884 DOI: 10.1038/srep09512  1
2015 Chau A, Kalsotra A. Developmental insights into the pathology of and therapeutic strategies for DM1: Back to the basics. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 244: 377-90. PMID 25504326 DOI: 10.1002/dvdy.24240  1
2014 Singh RK, Xia Z, Bland CS, Kalsotra A, Scavuzzo MA, Curk T, Ule J, Li W, Cooper TA. Rbfox2-coordinated alternative splicing of Mef2d and Rock2 controls myoblast fusion during myogenesis. Molecular Cell. 55: 592-603. PMID 25087874 DOI: 10.1016/j.molcel.2014.06.035  1
2014 Giudice J, Xia Z, Wang ET, Scavuzzo MA, Ward AJ, Kalsotra A, Wang W, Wehrens XH, Burge CB, Li W, Cooper TA. Alternative splicing regulates vesicular trafficking genes in cardiomyocytes during postnatal heart development. Nature Communications. 5: 3603. PMID 24752171 DOI: 10.1038/ncomms4603  1
2014 Kalsotra A, Singh RK, Gurha P, Ward AJ, Creighton CJ, Cooper TA. The Mef2 transcription network is disrupted in myotonic dystrophy heart tissue, dramatically altering miRNA and mRNA expression. Cell Reports. 6: 336-45. PMID 24412363 DOI: 10.1016/j.celrep.2013.12.025  1
2011 Kalsotra A, Cooper TA. Functional consequences of developmentally regulated alternative splicing. Nature Reviews. Genetics. 12: 715-29. PMID 21921927 DOI: 10.1038/nrg3052  1
2010 Kalsotra A, Wang K, Li PF, Cooper TA. MicroRNAs coordinate an alternative splicing network during mouse postnatal heart development. Genes & Development. 24: 653-8. PMID 20299448 DOI: 10.1101/gad.1894310  1
2008 Kalsotra A, Xiao X, Ward AJ, Castle JC, Johnson JM, Burge CB, Cooper TA. A postnatal switch of CELF and MBNL proteins reprograms alternative splicing in the developing heart Proceedings of the National Academy of Sciences of the United States of America. 105: 20333-20338. PMID 19075228 DOI: 10.1073/pnas.0809045105  1
2008 Castle JC, Zhang C, Shah JK, Kulkarni AV, Kalsotra A, Cooper TA, Johnson JM. Expression of 24,426 human alternative splicing events and predicted cis regulation in 48 tissues and cell lines. Nature Genetics. 40: 1416-25. PMID 18978788 DOI: 10.1038/ng.264  1
2008 Wang Y, Zhao J, Kalsotra A, Turman CM, Grill RJ, Dash PK, Strobel HW. CYP4Fs expression in rat brain correlates with changes in LTB4 levels after traumatic brain injury. Journal of Neurotrauma. 25: 1187-94. PMID 18847377 DOI: 10.1089/neu.2008.0542  1
2008 Kalsotra A, Du L, Wang Y, Ladd PA, Kikuta Y, Duvic M, Boyd AS, Keeney DS, Strobel HW. Inflammation resolved by retinoid X receptor-mediated inactivation of leukotriene signaling pathways. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 22: 538-47. PMID 17884973 DOI: 10.1096/fj.07-9244com  1
2007 Kalsotra A, Anakk S, Brommer CL, Kikuta Y, Morgan ET, Strobel HW. Catalytic characterization and cytokine mediated regulation of cytochrome P450 4Fs in rat hepatocytes. Archives of Biochemistry and Biophysics. 461: 104-12. PMID 17418803 DOI: 10.1016/j.abb.2007.02.027  1
2007 Kalsotra A, Zhao J, Anakk S, Dash PK, Strobel HW. Brain trauma leads to enhanced lung inflammation and injury: evidence for role of P4504Fs in resolution. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 27: 963-74. PMID 16985506 DOI: 10.1038/sj.jcbfm.9600396  1
2006 Kalsotra A, Strobel HW. Cytochrome P450 4F subfamily: at the crossroads of eicosanoid and drug metabolism. Pharmacology & Therapeutics. 112: 589-611. PMID 16926051 DOI: 10.1016/j.pharmthera.2006.03.008  1
2006 Puri S, Handa G, Kalsotra AK, Gupta VK, Shawl AS, Suri OP, Qazi GN. Preparative high-performance liquid chromatographic separation of naphthodianthrones from St. John's Wort. Journal of Chromatographic Science. 44: 177-80. PMID 16620514  1
2005 Kalsotra A, Cui X, Anakk S, Hinojos CA, Doris PA, Strobel HW. Renal localization, expression, and developmental regulation of P450 4F cytochromes in three substrains of spontaneously hypertensive rats. Biochemical and Biophysical Research Communications. 338: 423-31. PMID 16182239 DOI: 10.1016/j.bbrc.2005.08.101  1
2004 Kalsotra A, Turman CM, Kikuta Y, Strobel HW. Expression and characterization of human cytochrome P450 4F11: Putative role in the metabolism of therapeutic drugs and eicosanoids. Toxicology and Applied Pharmacology. 199: 295-304. PMID 15364545 DOI: 10.1016/j.taap.2003.12.033  1
2004 Anakk S, Kalsotra A, Kikuta Y, Huang W, Zhang J, Staudinger JL, Moore DD, Strobel HW. CAR/PXR provide directives for Cyp3a41 gene regulation differently from Cyp3a11. The Pharmacogenomics Journal. 4: 91-101. PMID 14770174 DOI: 10.1038/sj.tpj.6500222  1
2003 Kalsotra A, Turman CM, Dash PK, Strobel HW. Differential effects of traumatic brain injury on the cytochrome p450 system: a perspective into hepatic and renal drug metabolism. Journal of Neurotrauma. 20: 1339-50. PMID 14748982 DOI: 10.1089/089771503322686139  1
2003 Kalsotra A, Cui X, Antonovic L, Robida AM, Morgan ET, Strobel HW. Inflammatory prompts produce isoform-specific changes in the expression of leukotriene B(4) omega-hydroxylases in rat liver and kidney. Febs Letters. 555: 236-42. PMID 14644421 DOI: 10.1016/S0014-5793(03)01240-7  1
2003 Anakk S, Kalsotra A, Shen Q, Vu MT, Staudinger JL, Davies PJA, Strobel HW. Genomic characterization and regulation of CYP3a13: role of xenobiotics and nuclear receptors The Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 17: 1736-1738. PMID 12958193  1
2003 Cui X, Kalsotra A, Robida AM, Matzilevich D, Moore AN, Boehme CL, Morgan ET, Dash PK, Strobel HW. Expression of cytochromes P450 4F4 and 4F5 in infection and injury models of inflammation. Biochimica Et Biophysica Acta. 1619: 325-31. PMID 12573492 DOI: 10.1016/S0304-4165(02)00491-9  1
2002 Kalsotra A, Anakk S, Boehme CL, Strobel HW. Sexual dimorphism and tissue specificity in the expression of CYP4F forms in Sprague Dawley rats. Drug Metabolism and Disposition: the Biological Fate of Chemicals. 30: 1022-8. PMID 12167568 DOI: 10.1124/dmd.30.9.1022  1
2001 Palit G, Kalsotra A, Kumar R, Nath C, Dubey MP. Behavioural and anti-psychotic effects of Ca2+ channel blockers in rhesus monkey. European Journal of Pharmacology. 412: 139-44. PMID 11165225 DOI: 10.1016/S0014-2999(00)00801-3  1
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