Markus W. Germann - Publications

Chemistry Georgia State University, Atlanta, GA, United States 
General Chemistry, General Biophysics, Biochemistry

83 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Zhang J, Pearson JZ, Gorbet GE, Cölfen H, Germann MW, Brinton MA, Demeler B. Spectral and Hydrodynamic Analysis of West Nile Virus RNA-Protein Interactions by Multiwavelength Sedimentation Velocity in the Analytical Ultracentrifuge. Analytical Chemistry. PMID 27977168 DOI: 10.1021/acs.analchem.6b03926  0.32
2016 Evich M, Spring-Connell AM, Storici F, Germann MW. Structural impact of single ribonucleotides in DNA. Chembiochem : a European Journal of Chemical Biology. PMID 27504600 DOI: 10.1002/cbic.201600385  1
2016 Harika NK, Paul A, Stroeva E, Chai Y, Boykin DW, Germann MW, Wilson WD. Imino proton NMR guides the reprogramming of A•T specific minor groove binders for mixed base pair recognition. Nucleic Acids Research. PMID 27131382 DOI: 10.1093/nar/gkw353  1
2016 Evich M, Stroeva E, Zheng YG, Germann MW. Effect of methylation on the side-chain pKa value of arginine. Protein Science : a Publication of the Protein Society. 25: 479-86. PMID 26540340 DOI: 10.1002/pro.2838  1
2015 Smitherman C, Rungsrisuriyachai K, Germann MW, Gadda G. Identification of the catalytic base for alcohol activation in choline oxidase. Biochemistry. 54: 413-21. PMID 25478900 DOI: 10.1021/bi500982y  1
2015 Thompson RA, Spring AM, Sheng J, Huang Z, Germann MW. The importance of fitting in: conformational preference of selenium 2' modifications in nucleosides and helical structures. Journal of Biomolecular Structure & Dynamics. 33: 289-97. PMID 24558982 DOI: 10.1080/07391102.2014.880944  1
2014 Chiu HC, Koh KD, Evich M, Lesiak AL, Germann MW, Bongiorno A, Riedo E, Storici F. RNA intrusions change DNA elastic properties and structure. Nanoscale. 6: 10009-17. PMID 24992674 DOI: 10.1039/c4nr01794c  1
2014 Maganti N, Moody TD, Truax AD, Thakkar M, Spring AM, Germann MW, Greer SF. Nonproteolytic roles of 19S ATPases in transcription of CIITApIV genes. Plos One. 9: e91200. PMID 24625964 DOI: 10.1371/journal.pone.0091200  1
2014 Portella G, Germann MW, Hud NV, Orozco M. MD and NMR analyses of choline and TMA binding to duplex DNA: on the origins of aberrant sequence-dependent stability by alkyl cations in aqueous and water-free solvents. Journal of the American Chemical Society. 136: 3075-86. PMID 24490755 DOI: 10.1021/ja410698u  1
2014 Kamio M, Schmidt M, Germann MW, Kubanek J, Derby CD. The smell of moulting: N-acetylglucosamino-1,5-lactone is a premoult biomarker and candidate component of the courtship pheromone in the urine of the blue crab, Callinectes sapidus. The Journal of Experimental Biology. 217: 1286-96. PMID 24363413 DOI: 10.1242/jeb.099051  1
2013 Nanjunda R, Owens EA, Mickelson L, Dost TL, Stroeva EM, Huynh HT, Germann MW, Henary MM, Wilson WD. Selective G-quadruplex DNA recognition by a new class of designed cyanines. Molecules (Basel, Switzerland). 18: 13588-607. PMID 24192912 DOI: 10.3390/molecules181113588  1
2013 Davis WG, Basu M, Elrod EJ, Germann MW, Brinton MA. Identification of cis-acting nucleotides and a structural feature in West Nile virus 3'-terminus RNA that facilitate viral minus strand RNA synthesis. Journal of Virology. 87: 7622-36. PMID 23637406 DOI: 10.1128/JVI.00212-13  1
2013 Rettig M, Germann MW, Wang S, Wilson WD. Molecular basis for sequence-dependent induced DNA bending. Chembiochem : a European Journal of Chemical Biology. 14: 323-31. PMID 23355266 DOI: 10.1002/cbic.201200706  1
2013 Zhang J, Qu X, Covarrubias M, Germann MW. Insight into the modulation of Shaw2 Kv channels by general anesthetics: structural and functional studies of S4-S5 linker and S6 C-terminal peptides in micelles by NMR. Biochimica Et Biophysica Acta. 1828: 595-601. PMID 23031574 DOI: 10.1016/j.bbamem.2012.09.025  1
2013 Germann MW, Mishra SH, Santoso Y, Spring AM. Designing HIV-RREIIB RNA binding zinc fingers Zinc Fingers: Structure, Properties, and Applications. 81-100.  1
2012 Spring AM, Germann MW. Supercooled aqueous nuclear magnetic resonance using agarose gels. Analytical Biochemistry. 427: 79-81. PMID 22609075 DOI: 10.1016/j.ab.2012.05.003  1
2012 Germann MW, Johnson CN, Spring AM. Recognition of damaged DNA: structure and dynamic markers. Medicinal Research Reviews. 32: 659-83. PMID 22539108 DOI: 10.1002/med.20226  1
2012 Rettig M, Germann MW, Ismail MA, Batista-Parra A, Munde M, Boykin DW, Wilson WD. Microscopic rearrangement of bound minor groove binders detected by NMR. The Journal of Physical Chemistry. B. 116: 5620-7. PMID 22530735 DOI: 10.1021/jp301143e  1
2012 Johnson CN, Spring AM, Desai S, Cunningham RP, Germann MW. DNA sequence context conceals α-anomeric lesions. Journal of Molecular Biology. 416: 425-37. PMID 22227386 DOI: 10.1016/j.jmb.2011.12.051  1
2011 Kicklighter CE, Kamio M, Nguyen L, Germann MW, Derby CD. Mycosporine-like amino acids are multifunctional molecules in sea hares and their marine community. Proceedings of the National Academy of Sciences of the United States of America. 108: 11494-9. PMID 21709250 DOI: 10.1073/pnas.1103906108  1
2011 Zhang J, Germann MW. Characterization of secondary amide peptide bond isomerization: thermodynamics and kinetics from 2D NMR spectroscopy. Biopolymers. 95: 755-62. PMID 21538331 DOI: 10.1002/bip.21642  1
2011 Herberholz J, Mishra SH, Uma D, Germann MW, Edwards DH, Potter K. Non-invasive imaging of neuroanatomical structures and neural activation with high-resolution MRI. Frontiers in Behavioral Neuroscience. 5: 16. PMID 21503138 DOI: 10.3389/fnbeh.2011.00016  1
2011 Johnson CN, Spring AM, Sergueev D, Shaw BR, Germann MW. Structural basis of the RNase H1 activity on stereo regular borano phosphonate DNA/RNA hybrids. Biochemistry. 50: 3903-12. PMID 21443203 DOI: 10.1021/bi200083d  1
2011 Zhang X, Dou J, Germann MW. Advances in the analysis of hepatitis C virus specific T cell responses. Mini Reviews in Medicinal Chemistry. 11: 106-13. PMID 21222581 DOI: 10.2174/138955711794519483  1
2011 Kamio M, Kicklighter CE, Nguyen L, Germann MW, Derby CD. Isolation and structural elucidation of novel mycosporine-like amino acids as alarm cues in the defensive ink secretion of the sea hare aplysia Californica Helvetica Chimica Acta. 94: 1012-1018. DOI: 10.1002/hlca.201100117  1
2010 Tang Z, Xu B, Wu B, Germann MW, Wang G. Synthesis and structural determination of multidentate 2,3-dithiol-stabilized Au clusters. Journal of the American Chemical Society. 132: 3367-74. PMID 20158181 DOI: 10.1021/ja9076149  1
2009 Khan AM, Mishra SH, Germann MW. Cyclic enzymatic solid phase synthesis of isotopically labeled DNA oligonucleotides. Nucleosides, Nucleotides & Nucleic Acids. 28: 1030-41. PMID 20183571 DOI: 10.1080/15257770903362263  1
2009 Mishra SH, Spring AM, Germann MW. Thermodynamic profiling of HIV RREIIB RNA-zinc finger interactions. Journal of Molecular Biology. 393: 369-82. PMID 19646998 DOI: 10.1016/j.jmb.2009.07.066  1
2009 Pei H, Germann MW, Allison SA. Translational diffusion constants of short peptides: measurement by NMR and their use in structural studies of peptides. The Journal of Physical Chemistry. B. 113: 9326-9. PMID 19569725 DOI: 10.1021/jp902143q  1
2009 Zhang X, Dou J, Germann MW. Characterization of the cellular immune response in hepatitis C virus infection. Medicinal Research Reviews. 29: 843-66. PMID 19378287 DOI: 10.1002/med.20157  1
2009 Zhang J, Spring A, Germann MW. Facilitated assignment of adenine H2 resonances in oligonucleotides using homonuclear long-range couplings. Journal of the American Chemical Society. 131: 5380-1. PMID 19323530 DOI: 10.1021/ja900771b  1
2009 Horowitz ED, Lilavivat S, Holladay BW, Germann MW, Hud NV. Solution structure and thermodynamics of 2',5' RNA intercalation. Journal of the American Chemical Society. 131: 5831-8. PMID 19309071 DOI: 10.1021/ja810068e  1
2009 Mazurek A, Johnson CN, Germann MW, Fishel R. Sequence context effect for hMSH2-hMSH6 mismatch-dependent activation. Proceedings of the National Academy of Sciences of the United States of America. 106: 4177-82. PMID 19237577 DOI: 10.1073/pnas.0808572106  1
2009 Germann MW, Johnson CN, Spring AM. Unusual DNA structure and DNA damage recognition: Structure and dynamic markers Chimia. 63: 731-736. DOI: 10.2533/chimia.2009.731  1
2008 Reigle KL, Di Lullo G, Turner KR, Last JA, Chervoneva I, Birk DE, Funderburgh JL, Elrod E, Germann MW, Surber C, Sanderson RD, San Antonio JD. Non-enzymatic glycation of type I collagen diminishes collagen-proteoglycan binding and weakens cell adhesion. Journal of Cellular Biochemistry. 104: 1684-98. PMID 18348167 DOI: 10.1002/jcb.21735  1
2007 Germann MW, Turner T, Allison SA. Translational diffusion constants of the amino acids: measurement by NMR and their use in modeling the transport of peptides. The Journal of Physical Chemistry. A. 111: 1452-5. PMID 17269757 DOI: 10.1021/jp068217o  1
2006 Voehler MW, Collier G, Young JK, Stone MP, Germann MW. Performance of cryogenic probes as a function of ionic strength and sample tube geometry. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 183: 102-9. PMID 16949320 DOI: 10.1016/j.jmr.2006.08.002  1
2006 Bhattacharji A, Kaplan B, Harris T, Qu X, Germann MW, Covarrubias M. The concerted contribution of the S4-S5 linker and the S6 segment to the modulation of a Kv channel by 1-alkanols. Molecular Pharmacology. 70: 1542-54. PMID 16887933 DOI: 10.1124/mol.106.026187  1
2006 Mishra SH, Shelley CM, Barrow DJ, Darby MK, Germann MW. Solution structures and characterization of human immunodeficiency virus Rev responsive element IIB RNA targeting zinc finger proteins. Biopolymers. 83: 352-64. PMID 16826557 DOI: 10.1002/bip.20565  1
2006 Fan F, Germann MW, Gadda G. Mechanistic studies of choline oxidase with betaine aldehyde and its isosteric analogue 3,3-dimethylbutyraldehyde. Biochemistry. 45: 1979-86. PMID 16460045 DOI: 10.1021/bi0517537  1
2005 Salon J, Chen G, Portilla Y, Germann MW, Huang Z. Synthesis of a 2'-Se-uridine phosphoramidite and its incorporation into oligonucleotides for structural study. Organic Letters. 7: 5645-8. PMID 16321012 DOI: 10.1021/ol052270y  1
2005 Yang H, Johnson PM, Ko KC, Kamio M, Germann MW, Derby CD, Tai PC. Cloning, characterization and expression of escapin, a broadly antimicrobial FAD-containing L-amino acid oxidase from ink of the sea hare Aplysia californica. The Journal of Experimental Biology. 208: 3609-22. PMID 16155232 DOI: 10.1242/jeb.01795  1
2005 Covarrubias M, Bhattacharji A, Harris T, Kaplan B, Germann MW. Alcohol and anesthetic action at the gate of a voltage-dependent K+ channel International Congress Series. 1283: 55-60. DOI: 10.1016/j.ics.2005.06.045  1
2004 Aramini JM, Cleaver SH, Pon RT, Cunningham RP, Germann MW. Solution structure of a DNA duplex containing an alpha-anomeric adenosine: insights into substrate recognition by endonuclease IV. Journal of Molecular Biology. 338: 77-91. PMID 15050824 DOI: 10.1016/j.jmb.2004.02.035  1
2003 Shahidullah M, Harris T, Germann MW, Covarrubias M. Molecular features of an alcohol binding site in a neuronal potassium channel. Biochemistry. 42: 11243-52. PMID 14503874 DOI: 10.1021/bi034738f  1
2001 Malin EL, Alaimo MH, Brown EM, Aramini JM, Germann MW, Farrell HM, McSweeney PL, Fox PF. Solution structures of casein peptides: NMR, FTIR, CD, and molecular modeling studies of alphas1-casein, 1-23. Journal of Protein Chemistry. 20: 391-404. PMID 11732691 DOI: 10.1023/A:1012232804665  1
2001 Germann MW, Aramini JM, Kalisch BW, Van de Sande JH. Structural, dynamic, and enzymatic properties of mixed α/β-oligonucleotides containing polarity reversals Nucleosides, Nucleotides and Nucleic Acids. 20: 493-499. PMID 11563065 DOI: 10.1081/NCN-100002324  1
2001 Malin EL, Alaimo MH, Brown EM, Aramini JM, Germann MW, Farrell HM, McSweeney PLH, Fox PF. Solution structures of casein peptides: NMR, FTIR, CD, and molecular modeling studies of αs1-casein, 1-23 Protein Journal. 20: 391-404.  1
2000 Aramini JM, Mujeeb A, Ulyanov NB, Germann MW. Conformational dynamics in mixed α/β-oligonucleotides containing polarity reversals: A molecular dynamics study using time-averaged restraints Journal of Biomolecular Nmr. 18: 287-302. PMID 11200523 DOI: 10.1023/A:1026798010342  1
2000 Du Bois GC, Song SP, Kulikovskaya I, Rothstein JL, Germann MW, Croce CM. Purification and characterization of recombinant forms of murine Tcl1 proteins Protein Expression and Purification. 18: 277-285. PMID 10733880 DOI: 10.1006/prep.1999.1186  1
2000 Verrecchio A, Germann MW, Schick BP, Kung B, Twardowski T, San Antonio JD. Design of peptides with high affinities for heparin and endothelial cell proteoglycans. The Journal of Biological Chemistry. 275: 7701-7. PMID 10713081 DOI: 10.1074/jbc.275.11.7701  1
2000 Yu N, Aramini JM, Germann MW, Huang Z. Reactions of salicylaldehydes with alkyl cyanoacetates on the surface of solid catalysts: Syntheses of 4H-chromene derivatives Tetrahedron Letters. 41: 6993-6996.  1
1999 Aramini JM, Germann MW. Solution structure of a DNA·RNA hybrid containing an α-anomeric thymidine and polarity reversals: d(ATGG-3'-3'-αT-5'-5'-GCTC)·r(gagcaccau) Biochemistry. 38: 15448-15458. PMID 10569927 DOI: 10.1021/bi9915418  1
1999 Alaimo MH, Farrell HM, Germann MW. Conformational analysis of the hydrophobic peptide α(s1)-casein(136-196) Biochimica Et Biophysica Acta - Protein Structure and Molecular Enzymology. 1431: 410-420. PMID 10350616 DOI: 10.1016/S0167-4838(99)00061-8  1
1998 Aramini JM, Germann MW. NMR studies of DNA duplexes containing α-anomeric nucleotides and polarity reversals Biochemistry and Cell Biology. 76: 403-410. PMID 9923709  1
1998 Germann MW, Kalisch BW, Varnum JM, Vogel HJ, Van De Sande JH. NMR spectroscopic and enzymatic studies of DNA hairpins containing mismatches in the EcoRI recognition site Biochemistry and Cell Biology. 76: 391-402. PMID 9923708  1
1998 Aramini JM, Mujeeb A, Germann MW. NMR solution structures of [d(GCGAAT-3'-3'-αT-5'-5'-CGC)2] and its unmodified control Nucleic Acids Research. 26: 5644-5654. PMID 9837995  1
1998 Germann MW, Kalisch BW, Van De Sande JH. Structure of d(GT)(n)·d(GA)(n) sequences: Formation of parallel stranded duplex DNA Biochemistry. 37: 12962-12970. PMID 9737876 DOI: 10.1021/bi9726842  1
1998 Kalisch BW, Germann MW, Van De Sande JH. Antiparallel DNA duplex formation between alternating α d(GA)(n) and β d(GA)(n) sequences Febs Letters. 427: 301-304. PMID 9607333 DOI: 10.1016/S0014-5793(98)00453-0  1
1998 Du Bois GC, Song SP, Kulikovskaya I, Virgilio L, Varnum J, Germann MW, Croce CM. Purification and characterization of recombinant forms of TCL-1 and MTCP-1 proteins Protein Expression and Purification. 12: 215-225. PMID 9518463 DOI: 10.1006/prep.1997.0822  1
1998 Aramini JM, Van De Sande JH, Germann MW. Structure and Stability of DNA Containing Inverted Anomeric Centers and Polarity Reversals Acs Symposium Series. 682: 92-105.  1
1997 Aramini JM, Van De Sande JH, Germann MW. Spectroscopic and thermodynamic studies of DNA duplexes containing α- anomeric C, A, and G nucleotides and polarity reversals: Coexistence of localized parallel and antiparallel DNA Biochemistry. 36: 9715-9725. PMID 9245403 DOI: 10.1021/bi9706071  1
1997 Satoh T, Aramini JM, Li S, Friedman TM, Gao J, Edling AE, Townsend R, Koch U, Choksi S, Germann MW, Korngold R, Huang Z. Bioactive peptide design based on protein surface epitopes. A cyclic heptapeptide mimics CD4 domain 1 CC' loop and inhibits CD4 biological function. The Journal of Biological Chemistry. 272: 12175-80. PMID 9115290 DOI: 10.1074/jbc.272.18.12175  1
1997 Aramini JM, Germann MW, Vogel HJ. Soft-Pulsed Aluminum-27 Quadrupolar Central Transition NMR Studies of Ovotransferrin Journal of Magnetic Resonance. 129: 111-114.  1
1997 Germann MW, Aramini JM, Kalisch BW, Pon RT, Van de Sande JH. DNA duplexes containing alpha anomeric nucleotides and polarity reversals: Coexistence of parallel and antiparallel DNA Nucleosides and Nucleotides. 16: 1481-1485.  1
1996 Shachar-Hill Y, Pfeffer PE, Germann MW. Following plant metabolism in vivo and in extracts with heteronuclear two-dimensional nuclear magnetic resonance spectroscopy Analytical Biochemistry. 243: 110-118. PMID 8954532 DOI: 10.1006/abio.1996.0488  1
1996 Germann MW, Kalisch BW, Van De Sande JH. Homooligomeric dA·dU and dA·dT sequences in parallel and antiparallel strand orientation: Consequence of the 5-methyl groups on stability, structure and interaction with the minor groove binding drug HOECHST 33258 Journal of Biomolecular Structure and Dynamics. 13: 953-963. PMID 8832378  1
1996 Aramini JM, Kalisch BW, Pon RT, Van de Sande JH, Germann MW. Structure of a DNA duplex that contains α-anomeric nucleotides and 3'- 3' and 5'-5' phosphodiester linkages: Coexistence of parallel and antiparallel DNA Biochemistry. 35: 9355-9365. PMID 8755713 DOI: 10.1021/bi960612p  1
1996 Kotani H, Germann MW, Andrus A, Vinayak R, Mullah B, Kmiec EB. RNA facilitates RecA-mediated DNA pairing and strand transfer between molecules bearing limited regions of homology Molecular and General Genetics. 250: 626-634. PMID 8676865 DOI: 10.1007/BF02174450  1
1995 Germann MW, Zhou N, Van de Sande JH, Vogel HJ. [9] Parallel-stranded duplex DNA: An NMR perspective Methods in Enzymology. 261: 207-225. PMID 8569496 DOI: 10.1016/S0076-6879(95)61011-1  1
1994 Germann MW, Aramini JM, Vogel HJ. Quadrupolar metal ion NMR study of ovotransferrin at 17.6 T Journal of the American Chemical Society. 116: 6971-6972.  1
1993 Zhou N, Germann MW, Van De Sande JH, Pattabiraman N, Vogel HJ. Solution structure of the parallel-stranded hairpin d(T8〈〉C4A8) as determined by two-dimensional NMR Biochemistry. 32: 646-656. PMID 8380706 DOI: 10.1021/bi00053a033  1
1993 Aramini JM, Germann MW, Vogel HJ. Field-dependent aluminum-27 NMR studies of the transferrins: An approach for the study of metal ion binding sites in larger proteins Journal of the American Chemical Society. 115: 9750-9753.  1
1990 Germann MW, Kalisch BW, Lundberg P, Vogel HJ, van de Sande JH. Perturbation of DNA hairpins containing the EcoRI recognition site by hairpin loops of varying size and composition: Physical (NMR and UV) and enzymatic (EcoRI) studies Nucleic Acids Research. 18: 1489-1498. PMID 2326190 DOI: 10.1093/nar/18.6.1489  1
1990 Germann MW, Kalisch BW, Pon RT, Van De Sande JH. Length-dependent formation of parallel-stranded DNA in alternating AT segments Biochemistry®. 29: 9426-9432. PMID 2248956  1
1990 Baleja JD, Germann MW, Van de Sande JH, Sykes BD. Solution conformation of purine-pyrimidine DNA octamers using nuclear magnetic resonance, restrained molecular dynamics and NOE-based refinement Journal of Molecular Biology. 215: 411-428. PMID 2231713  1
1990 McIntyre DD, Germann MW, Vogel HJ. Conformational analysis and complete assignment of the proton and carbon NMR spectra of ouabain and ouabagenin Canadian Journal of Chemistry. 68: 1263-1270.  1
1989 Germann MW, Vogel HJ, Pon RT, Van De Sande JH. Characterization of a parallel-stranded DNA hairpin Biochemistry. 28: 6220-6228. PMID 2789997 DOI: 10.1021/bi00441a013  1
1988 Van De Sande JH, Ramsing NB, Germann MW, Elhorst W, Kalisch BW, v. Kitzing E, Pon RT, Clegg RC, Jovin TM. Parallel stranded DNA Science. 241: 551-557. PMID 3399890  1
1988 Wolk SK, Hardin CC, Germann MW, van de Sande JH, Tinoco I. Comparison of the B- and Z-form hairpin loop structures formed by d(CG)5T4(CG)5. Biochemistry. 27: 6960-7. PMID 3196693  1
1988 Germann MW, Kalisch BW, Van De Sande JH. Relative stability of parallel- and antiparallel-stranded duplex DNA Biochemistry. 27: 8302-8306. PMID 2468357  1
1987 Germann MW, Pon RT, van de Sande JH. A general method for the purification of synthetic oligodeoxyribonucleotides containing strong secondary structure by reversed-phase high-performance liquid chromatography on PRP-1 resin Analytical Biochemistry. 165: 399-405. PMID 3425910 DOI: 10.1016/0003-2697(87)90288-0  1
1985 Germann MW, Schoenwaelder KH, Van De Sande JH. Right- and left-handed (Z) helical conformations of the hairpin d(C-G)5T4(C-G)5 monomer and dimer Biochemistry. 24: 5698-5702. PMID 4084487  1
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