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David Jeruzalmi - Publications

Affiliations: 
Chemistry and Biochemistry City College of New York, New York, NY, United States 
Area:
DNA replication, DNA repair, structural biology, x-ray crystallography
Website:
http://www.gc.cuny.edu/Page-Elements/Academics-Research-Centers-Initiatives/Doctoral-Programs/Chemistry/Faculty-Bios/David-Jeruzalmi
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30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Chase J, Berger J, Jeruzalmi D. Convergent evolution in two bacterial replicative helicase loaders. Trends in Biochemical Sciences. PMID 35351361 DOI: 10.1016/j.tibs.2022.02.005  0.375
2021 Kraithong T, Hartley S, Jeruzalmi D, Pakotiprapha D. A Peek Inside the Machines of Bacterial Nucleotide Excision Repair. International Journal of Molecular Sciences. 22. PMID 33477956 DOI: 10.3390/ijms22020952  0.311
2020 Kraithong T, Sucharitakul J, Buranachai C, Jeruzalmi D, Chaiyen P, Pakotiprapha D. Real-time investigation of the roles of ATP hydrolysis by UvrA and UvrB during DNA damage recognition in nucleotide excision repair. Dna Repair. 97: 103024. PMID 33302090 DOI: 10.1016/j.dnarep.2020.103024  0.365
2018 Chase J, Catalano A, Noble AJ, Eng ET, Olinares PDB, Molloy K, Pakotiprapha D, Samuels M, Chait B, des Georges A, Jeruzalmi D. Mechanisms of opening and closing of the bacterial replicative helicase. Elife. 7. PMID 30582519 DOI: 10.7554/Elife.41140  0.333
2014 Jeruzalmi D. Inner Workings of the UvrA·UvrB DNA Damage Sensor during Bacterial Nucleotide Excision Repair Acta Crystallographica Section a Foundations and Advances. 70: C453-C453. DOI: 10.1107/S2053273314095461  0.409
2013 Pakotiprapha D, Jeruzalmi D. Small-angle X-ray scattering reveals architecture and A₂B₂ stoichiometry of the UvrA-UvrB DNA damage sensor. Proteins. 81: 132-9. PMID 22933319 DOI: 10.1002/Prot.24170  0.321
2012 Pakotiprapha D, Samuels M, Shen K, Hu JH, Jeruzalmi D. Structure and mechanism of the UvrA-UvrB DNA damage sensor. Nature Structural & Molecular Biology. 19: 291-8. PMID 22307053 DOI: 10.1038/Nsmb.2240  0.396
2009 Muecke M, Samuels M, Davey M, Jeruzalmi D. Preparation of Multimilligram Quantities of Large, Linear DNA Molecules for Structural Studies. Structure (London, England : 1993). 17: 1679. PMID 28903019 DOI: 10.1016/j.str.2009.11.005  0.33
2009 Jeruzalmi D. Enzymatic synthesis of multi-milligram quantities of large, linear DNA molecules for structural studies. Cold Spring Harbor Protocols. 2009: pdb.prot5197. PMID 20147140 DOI: 10.1101/pdb.prot5197  0.366
2009 Lu M, Yang J, Ren Z, Sabui S, Espejo A, Bedford MT, Jacobson RH, Jeruzalmi D, McMurray JS, Chen X. Crystal structure of the three tandem FF domains of the transcription elongation regulator CA150. Journal of Molecular Biology. 393: 397-408. PMID 19660470 DOI: 10.1016/J.Jmb.2009.07.086  0.525
2009 Pakotiprapha D, Liu Y, Verdine GL, Jeruzalmi D. A structural model for the damage-sensing complex in bacterial nucleotide excision repair. The Journal of Biological Chemistry. 284: 12837-44. PMID 19287003 DOI: 10.1074/Jbc.M900571200  0.395
2009 Muecke M, Samuels M, Davey M, Jeruzalmi D. Preparation of Multimilligram Quantities of Large, Linear DNA Molecules for Structural Studies (DOI:10.1016/j.str.2008.04.008) Structure. 17: 1679. DOI: 10.1016/j.str.2009.11.005  0.318
2008 Muecke M, Samuels M, Davey M, Jeruzalmi D. Preparation of multimilligram quantities of large, linear DNA molecules for structural studies. Structure (London, England : 1993). 16: 837-41. PMID 18547516 DOI: 10.1016/J.Str.2008.04.008  0.308
2008 Pakotiprapha D, Inuzuka Y, Bowman BR, Moolenaar GF, Goosen N, Jeruzalmi D, Verdine GL. Crystal structure of Bacillus stearothermophilus UvrA provides insight into ATP-modulated dimerization, UvrB interaction, and DNA binding. Molecular Cell. 29: 122-33. PMID 18158267 DOI: 10.1016/J.Molcel.2007.10.026  0.376
2006 O'Donnell M, Jeruzalmi D. Helical proteins initiate replication of DNA helices. Nature Structural & Molecular Biology. 13: 665-7. PMID 16886004 DOI: 10.1038/Nsmb0806-665  0.383
2002 Davey MJ, Jeruzalmi D, Kuriyan J, O'Donnell M. Motors and switches: AAA+ machines within the replisome. Nature Reviews. Molecular Cell Biology. 3: 826-35. PMID 12415300 DOI: 10.1038/Nrm949  0.59
2002 Jeruzalmi D, O'Donnell M, Kuriyan J. Clamp loaders and sliding clamps. Current Opinion in Structural Biology. 12: 217-24. PMID 11959500 DOI: 10.1016/S0959-440X(02)00313-5  0.625
2002 Bruck I, Yuzhakov A, Yurieva O, Jeruzalmi D, Skangalis M, Kuriyan J, O'Donnell M. Analysis of a multicomponent thermostable DNA polymerase III replicase from an extreme thermophile. The Journal of Biological Chemistry. 277: 17334-48. PMID 11859073 DOI: 10.1074/Jbc.M110198200  0.594
2001 O'Donnell M, Jeruzalmi D, Kuriyan J. Clamp loader structure predicts the architecture of DNA polymerase III holoenzyme and RFC. Current Biology : Cb. 11: R935-46. PMID 11719243 DOI: 10.1016/S0960-9822(01)00559-0  0.632
2001 Jeruzalmi D, O'Donnell M, Kuriyan J. Crystal structure of the processivity clamp loader gamma (gamma) complex of E. coli DNA polymerase III. Cell. 106: 429-41. PMID 11525729 DOI: 10.1016/S0092-8674(01)00463-9  0.646
2001 Jeruzalmi D, Yurieva O, Zhao Y, Young M, Stewart J, Hingorani M, O'Donnell M, Kuriyan J. Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III. Cell. 106: 417-28. PMID 11525728 DOI: 10.1016/S0092-8674(01)00462-7  0.631
2000 Jeruzalmi D, Kuriyan J, Doudna J. Paul Sigler (1934-2000). Trends in Biochemical Sciences. 25: 221-2. PMID 10782089 DOI: 10.1016/S0968-0004(00)01587-5  0.419
2000 Moarefi I, Jeruzalmi D, Turner J, O'Donnell M, Kuriyan J. Crystal structure of the DNA polymerase processivity factor of T4 bacteriophage. Journal of Molecular Biology. 296: 1215-23. PMID 10698628 DOI: 10.1006/Jmbi.1999.3511  0.66
1999 Zhao Y, Jeruzalmi D, Moarefi I, Leighton L, Lasken R, Kuriyan J. Crystal structure of an archaebacterial DNA polymerase. Structure (London, England : 1993). 7: 1189-99. PMID 10545321 DOI: 10.1016/S0969-2126(00)80053-2  0.644
1999 Cheetham GM, Jeruzalmi D, Steitz TA. Structural basis for initiation of transcription from an RNA polymerase-promoter complex. Nature. 399: 80-3. PMID 10331394 DOI: 10.1038/19999  0.651
1999 Cheetham GMT, Jeruzalmi D, Steitz TA. Correction: Structural basis for initiation of transcription from an RNA polymerase–promoter complex Nature. 400: 89-89. DOI: 10.1038/21929  0.52
1998 Cheetham GM, Jeruzalmi D, Steitz TA. Transcription regulation, initiation, and "DNA scrunching" by T7 RNA polymerase. Cold Spring Harbor Symposia On Quantitative Biology. 63: 263-7. PMID 10384290 DOI: 10.1101/Sqb.1998.63.263  0.59
1998 Jeruzalmi D, Steitz TA. Structure of T7 RNA polymerase complexed to the transcriptional inhibitor T7 lysozyme. The Embo Journal. 17: 4101-13. PMID 9670025 DOI: 10.1093/Emboj/17.14.4101  0.591
1998 Chen X, Vinkemeier U, Zhao Y, Jeruzalmi D, Darnell JE, Kuriyan J. Crystal structure of a tyrosine phosphorylated STAT-1 dimer bound to DNA. Cell. 93: 827-39. PMID 9630226 DOI: 10.1016/S0092-8674(00)81443-9  0.661
1997 Jeruzalmi D, Steitz TA. Use of organic cosmotropic solutes to crystallize flexible proteins: application to T7 RNA polymerase and its complex with the inhibitor T7 lysozyme. Journal of Molecular Biology. 274: 748-56. PMID 9405156 DOI: 10.1006/Jmbi.1997.1366  0.564
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