| Year |
Citation |
Score |
| 2024 |
Massidda MW, Demkov A, Sices A, Lee M, Lee J, Paull TT, Kim J, Baker AB. Mechanical Rejuvenation of Mesenchymal Stem Cells from Aged Patients. Biorxiv : the Preprint Server For Biology. PMID 38895474 DOI: 10.1101/2024.06.06.597781 |
0.336 |
|
| 2024 |
Lee M, Guo Q, Kim M, Choi J, Segura A, Genceroglu A, LeBlanc L, Ramirez N, Jang YJ, Jang Y, Lee BK, Marcotte EM, Kim J. Systematic mapping of TF-mediated cell fate changes by a pooled induction coupled with scRNA-seq and multi-omics approaches. Genome Research. PMID 38580401 DOI: 10.1101/gr.277926.123 |
0.85 |
|
| 2024 |
Kim M, Jang YJ, Lee M, Guo Q, Son AJ, Kakkad NA, Roland AB, Lee BK, Kim J. The transcriptional regulatory network modulating human trophoblast stem cells to extravillous trophoblast differentiation. Nature Communications. 15: 1285. PMID 38346993 DOI: 10.1038/s41467-024-45669-2 |
0.844 |
|
| 2023 |
Kim JH, Mun SJ, Kim JH, Son MJ, Kim SY. Integrative analysis of single-cell RNA-seq and ATAC-seq reveals heterogeneity of induced pluripotent stem cell-derived hepatic organoids. Iscience. 26: 107675. PMID 37680467 DOI: 10.1016/j.isci.2023.107675 |
0.305 |
|
| 2023 |
Rhee C, Scadden EW, Wong LP, Schiroli G, Mazzola MC, Chea PL, Kato H, Hoyer FF, Mistry M, Lee BK, Kim J, Nahrendorf M, Mansour M, Sykes DB, Sadreyev R, et al. Limited plasticity of monocyte fate and function associated with epigenetic scripting at the level of progenitors. Blood. PMID 37267513 DOI: 10.1182/blood.2023020257 |
0.814 |
|
| 2023 |
Kim M, Adu-Gyamfi EA, Kim J, Lee BK. Super-enhancer-associated transcription factors collaboratively regulate trophoblast-active gene expression programs in human trophoblast stem cells. Nucleic Acids Research. PMID 36951126 DOI: 10.1093/nar/gkad215 |
0.855 |
|
| 2022 |
Kim M, Singh M, Lee BK, Hibbs M, Richardson K, Ellies L, Wintle L, Stuart LM, Wang JY, Voon DC, Blancafort P, Wang J, Kim J, Leedman PJ, Woo AJ. A MYC-ZNF148-ID1/3 regulatory axis modulating cancer stem cell traits in aggressive breast cancer. Oncogenesis. 11: 60. PMID 36207293 DOI: 10.1038/s41389-022-00435-1 |
0.819 |
|
| 2022 |
Jang YJ, Kim M, Lee BK, Kim J. Induction of human trophoblast stem-like cells from primed pluripotent stem cells. Proceedings of the National Academy of Sciences of the United States of America. 119: e2115709119. PMID 35537047 DOI: 10.1073/pnas.2115709119 |
0.831 |
|
| 2022 |
LeBlanc L, Kim M, Kambhampati A, Son AJ, Ramirez N, Kim J. β-catenin links cell seeding density to global gene expression during mouse embryonic stem cell differentiation. Iscience. 25: 103541. PMID 34977504 DOI: 10.1016/j.isci.2021.103541 |
0.832 |
|
| 2022 |
Li J, Kumari T, Barazia A, Jha V, Jeong SY, Olson A, Kim M, Lee BK, Manickam V, Song Z, Clemens R, Razani B, Kim J, Dinauer MC, Cho J. Neutrophil DREAM promotes neutrophil recruitment in vascular inflammation. The Journal of Experimental Medicine. 219. PMID 34751735 DOI: 10.1084/jem.20211083 |
0.784 |
|
| 2021 |
Lee JY, Davis I, Youth EHH, Kim J, Churchill G, Godwin J, Korstanje R, Beck S. Misexpression of genes lacking CpG islands drives degenerative changes during aging. Science Advances. 7: eabj9111. PMID 34910517 DOI: 10.1126/sciadv.abj9111 |
0.643 |
|
| 2021 |
Choi J, Jang YJ, Dabrowska C, Iich E, Evans KV, Hall H, Janes SM, Simons BD, Koo BK, Kim J, Lee JH. Release of Notch activity coordinated by IL-1β signalling confers differentiation plasticity of airway progenitors via Fosl2 during alveolar regeneration. Nature Cell Biology. PMID 34475534 DOI: 10.1038/s41556-021-00742-6 |
0.33 |
|
| 2021 |
Lee BK, Kim J. Integrating High-Throughput Approaches and Human Trophoblast Models to Decipher Mechanisms Underlying Early Human Placenta Development. Frontiers in Cell and Developmental Biology. 9: 673065. PMID 34150768 DOI: 10.3389/fcell.2021.673065 |
0.769 |
|
| 2021 |
Golden E, Rashwan R, Woodward EA, Sgro A, Wang E, Sorolla A, Waryah C, Tie WJ, Cuyàs E, Ratajska M, Kardaś I, Kozlowski P, Johnstone EKM, See HB, Duffy C, ... ... Kim J, et al. The oncogene AAMDC links PI3K-AKT-mTOR signaling with metabolic reprograming in estrogen receptor-positive breast cancer. Nature Communications. 12: 1920. PMID 33772001 DOI: 10.1038/s41467-021-22101-7 |
0.757 |
|
| 2021 |
Lee JY, Song J, LeBlanc L, Davis I, Kim J, Beck S. Conserved dual-mode gene regulation programs in higher eukaryotes. Nucleic Acids Research. PMID 33621342 DOI: 10.1093/nar/gkab108 |
0.816 |
|
| 2021 |
LeBlanc L, Ramirez N, Kim J. Context-dependent roles of YAP/TAZ in stem cell fates and cancer. Cellular and Molecular Life Sciences : Cmls. PMID 33582842 DOI: 10.1007/s00018-021-03781-2 |
0.824 |
|
| 2021 |
Lee J, Henderson K, Massidda MW, Armenta-Ochoa M, Im BG, Veith A, Lee BK, Kim M, Maceda P, Yoon E, Samarneh L, Wong M, Dunn AK, Kim J, Baker AB. Mechanobiological conditioning of mesenchymal stem cells for enhanced vascular regeneration. Nature Biomedical Engineering. 5: 89-102. PMID 33483713 DOI: 10.1038/s41551-020-00674-w |
0.818 |
|
| 2020 |
Park S, Jo SH, Kim JH, Kim SY, Ha JD, Hwang JY, Lee MY, Kang JS, Han TS, Park SG, Kim S, Park BC, Kim JH. Combination Treatment with GSK126 and Pomalidomide Induces B-Cell Differentiation in Gain-of-Function Mutant Diffuse Large B-Cell Lymphoma. Cancers. 12. PMID 32906688 DOI: 10.3390/cancers12092541 |
0.331 |
|
| 2020 |
Seo EH, Kim HJ, Kim JH, Lim B, Park JL, Kim SY, Lee SI, Jeong HY, Song KS, Kim YS. ONECUT2 upregulation is associated with CpG hypomethylation at promoter-proximal DNA in gastric cancer and triggers ACSL5. International Journal of Cancer. PMID 32129880 DOI: 10.1002/ijc.32946 |
0.311 |
|
| 2019 |
Bak DH, Lee E, Choi MJ, Lee BC, Kwon TR, Kim JH, Jeon ES, Oh W, Mun SK, Park BC, Na J, Kim BJ. Protective effects of human umbilical cord blood‑derived mesenchymal stem cells against dexamethasone‑induced apoptotic cell death in hair follicles. International Journal of Molecular Medicine. PMID 31894311 DOI: 10.3892/ijmm.2019.4447 |
0.316 |
|
| 2019 |
Lee BK, Jang YJ, Kim M, LeBlanc L, Rhee C, Lee J, Beck S, Shen W, Kim J. Super-enhancer-guided mapping of regulatory networks controlling mouse trophoblast stem cells. Nature Communications. 10: 4749. PMID 31628347 DOI: 10.1038/S41467-019-12720-6 |
0.818 |
|
| 2019 |
Seruggia D, Oti M, Tripathi P, Canver MC, LeBlanc L, Di Giammartino DC, Bullen MJ, Nefzger CM, Sun YBY, Farouni R, Polo JM, Pinello L, Apostolou E, Kim J, Orkin SH, et al. TAF5L and TAF6L Maintain Self-Renewal of Embryonic Stem Cells via the MYC Regulatory Network. Molecular Cell. PMID 31005419 DOI: 10.1016/J.Molcel.2019.03.025 |
0.826 |
|
| 2019 |
Skamagki M, Correia C, Yeung P, Baslan T, Beck S, Zhang C, Ross CA, Dang L, Liu Z, Giunta S, Chang TP, Wang J, Ananthanarayanan A, Bohndorf M, Bosbach B, ... ... Kim J, et al. Author Correction: ZSCAN10 expression corrects the genomic instability of iPSCs from aged donors. Nature Cell Biology. PMID 30643186 DOI: 10.1038/S41556-018-0269-Y |
0.634 |
|
| 2019 |
Rhee CS, Scadden EW, Phillip CL, Lee B, Mistry M, Hoyer FF, Kato H, Mantica G, Kim J, Nahrendorf M, Mansour MK, Sykes DB, Scadden DT. Functionally Distinct Subsets of Monocytes in Mouse and Human Blood Blood. 134: 438-438. DOI: 10.1182/Blood-2019-124054 |
0.813 |
|
| 2018 |
LeBlanc L, Lee BK, Yu AC, Kim M, Kambhampati AV, Dupont SM, Seruggia D, Ryu BU, Orkin SH, Kim J. Yap1 safeguards mouse embryonic stem cells from excessive apoptosis during differentiation. Elife. 7. PMID 30561326 DOI: 10.7554/Elife.40167 |
0.828 |
|
| 2018 |
Jeon YJ, Kim T, Park D, Nuovo GJ, Rhee S, Joshi P, Lee BK, Jeong J, Suh SS, Grotzke JE, Kim SH, Song J, Sim H, Kim Y, Peng Y, ... ... Kim J, et al. miRNA-mediated TUSC3 deficiency enhances UPR and ERAD to promote metastatic potential of NSCLC. Nature Communications. 9: 5110. PMID 30504895 DOI: 10.1038/S41467-018-07561-8 |
0.754 |
|
| 2018 |
Johnson TE, Lee JH, Myler LR, Zhou Y, Mosley TJ, Yang SH, Uprety N, Kim J, Paull TT. Homeodomain Proteins Directly Regulate ATM Kinase Activity. Cell Reports. 24: 1471-1483. PMID 30089259 DOI: 10.1016/J.Celrep.2018.06.089 |
0.326 |
|
| 2018 |
Wang E, Sorolla A, Cunningham PT, Bogdawa HM, Beck S, Golden E, Dewhurst RE, Florez L, Cruickshank MN, Hoffmann K, Hopkins RM, Kim J, Woo AJ, Watt PM, Blancafort P. Tumor penetrating peptides inhibiting MYC as a potent targeted therapeutic strategy for triple-negative breast cancers. Oncogene. PMID 30076412 DOI: 10.1038/S41388-018-0421-Y |
0.677 |
|
| 2018 |
Kim JH, Kim M, He XB, Wulansari N, Yoon BH, Bae DH, Huh N, Kim YS, Lee SH, Kim SY. Vitamin C Promotes Astrocyte Differentiation Through DNA Hydroxymethylation. Stem Cells (Dayton, Ohio). PMID 30005139 DOI: 10.1002/stem.2886 |
0.34 |
|
| 2018 |
Kim KY, Tanaka Y, Su J, Cakir B, Xiang Y, Patterson B, Ding J, Jung YW, Kim JH, Hysolli E, Lee H, Dajani R, Kim J, Zhong M, Lee JH, et al. Uhrf1 regulates active transcriptional marks at bivalent domains in pluripotent stem cells through Setd1a. Nature Communications. 9: 2583. PMID 29968706 DOI: 10.1038/S41467-018-04818-0 |
0.508 |
|
| 2018 |
Beck S, Rhee C, Song J, Lee BK, LeBlanc L, Cannon L, Kim J. Implications of CpG islands on chromosomal architectures and modes of global gene regulation. Nucleic Acids Research. PMID 29529258 DOI: 10.1093/Nar/Gky147 |
0.79 |
|
| 2018 |
LeBlanc L, Lee B, Yu AC, Kim M, Kambhampati AV, Dupont SM, Seruggia D, Ryu BU, Orkin SH, Kim J. Author response: Yap1 safeguards mouse embryonic stem cells from excessive apoptosis during differentiation Elife. DOI: 10.7554/Elife.40167.035 |
0.813 |
|
| 2017 |
Rhee C, Kim J, Tucker HO. Transcriptional Regulation of the First Cell Fate Decision. Journal of Developmental Biology & Regenerative Medicine. 1. PMID 29658952 |
0.819 |
|
| 2017 |
Lee BK, Uprety N, Jang YJ, Tucker SK, Rhee C, LeBlanc L, Beck S, Kim J. Fosl1 overexpression directly activates trophoblast-specific gene expression programs in embryonic stem cells. Stem Cell Research. 26: 95-102. PMID 29272857 DOI: 10.1016/J.Scr.2017.12.004 |
0.842 |
|
| 2017 |
Rhee C, Lee BK, Beck S, LeBlanc L, Tucker HO, Kim J. Mechanisms of transcription factor-mediated direct reprogramming of mouse embryonic stem cells to trophoblast stem-like cells. Nucleic Acids Research. 45: 10103-10114. PMID 28973471 DOI: 10.1093/Nar/Gkx692 |
0.843 |
|
| 2017 |
Skamagki M, Correia C, Yeung P, Baslan T, Beck S, Zhang C, Ross CA, Dang L, Liu Z, Giunta S, Chang TP, Wang J, Ananthanarayanan A, Bohndorf M, Bosbach B, ... ... Kim J, et al. ZSCAN10 expression corrects the genomic instability of iPSCs from aged donors. Nature Cell Biology. PMID 28846095 DOI: 10.1038/Ncb3598 |
0.701 |
|
| 2017 |
Wang L, Zhang F, Rode S, Chin KK, Ko EE, Kim J, Iyer VR, Qiao H. Ethylene induces combinatorial effects of histone H3 acetylation in gene expression in Arabidopsis. Bmc Genomics. 18: 538. PMID 28716006 DOI: 10.1186/S12864-017-3929-6 |
0.761 |
|
| 2017 |
Lee BK, Lee J, Shen W, Rhee C, Chung H, Kim J. Fbxl19 recruitment to CpG islands is required for Rnf20-mediated H2B mono-ubiquitination. Nucleic Acids Research. PMID 28453857 DOI: 10.1093/Nar/Gkx310 |
0.833 |
|
| 2016 |
Rhee C, Edwards M, Dang C, Harris J, Brown M, Kim J, Tucker HO. ARID3A is required for mammalian placenta development. Developmental Biology. PMID 27965054 DOI: 10.1016/J.Ydbio.2016.12.003 |
0.829 |
|
| 2016 |
Sanchez A, De Vivo A, Uprety N, Kim J, Stevens SM, Kee Y. BMI1-UBR5 axis regulates transcriptional repression at damaged chromatin. Proceedings of the National Academy of Sciences of the United States of America. PMID 27647897 DOI: 10.1073/Pnas.1610735113 |
0.393 |
|
| 2016 |
Bordiya Y, Zheng Y, Nam JC, Bonnard AC, Choi HW, Lee BK, Kim JK, Klessig D, Fei Z, Kang HG. Pathogen Infection and MORC proteins Affect Chromatin Accessibility of Transposable Elements and Expression of Their Proximal Genes in Arabidopsis. Molecular Plant-Microbe Interactions : Mpmi. PMID 27482822 DOI: 10.1094/Mpmi-01-16-0023-R |
0.799 |
|
| 2016 |
Chung H, Lee BK, Uprety N, Shen W, Lee J, Kim J. Yap1 is dispensable for self-renewal but required for proper differentiation of mouse embryonic stem (ES) cells. Embo Reports. PMID 26917425 DOI: 10.15252/Embr.201540933 |
0.852 |
|
| 2016 |
Kim SH, Ezhilarasan R, Phillips E, Gallego-Perez D, Sparks A, Taylor D, Ladner K, Furuta T, Sabit H, Chhipa R, Cho JH, Mohyeldin A, Beck S, Kurozumi K, Kuroiwa T, ... ... Kim J, et al. Serine/Threonine Kinase MLK4 Determines Mesenchymal Identity in Glioma Stem Cells in an NF-κB-dependent Manner. Cancer Cell. 29: 201-213. PMID 26859459 DOI: 10.1016/J.Ccell.2016.01.005 |
0.701 |
|
| 2016 |
Li Q, Lex RK, Chung H, Giovanetti SM, Ji Z, Ji H, Person MD, Kim J, Vokes SA. NANOG binds to GLI proteins and represses Hedgehog-mediated transcription. The Journal of Biological Chemistry. PMID 26797124 DOI: 10.1074/Jbc.M116.714857 |
0.834 |
|
| 2015 |
Hoshino K, Chung H, Wu CH, Rajendran K, Huang YY, Chen P, Sokolov KV, Kim J, Zhang JXJ. An Immunofluorescence-Assisted Microfluidic Single Cell Quantitative Reverse Transcription Polymerase Chain Reaction Analysis of Tumour Cells Separated from Blood. Journal of Circulating Biomarkers. 4: 11. PMID 28936247 DOI: 10.5772/61822 |
0.777 |
|
| 2015 |
Lee BK, Shen W, Lee J, Rhee C, Chung H, Kim KY, Park IH, Kim J. Tgif1 Counterbalances the Activity of Core Pluripotency Factors in Mouse Embryonic Stem Cells. Cell Reports. PMID 26411691 DOI: 10.1016/J.Celrep.2015.08.067 |
0.81 |
|
| 2015 |
Rhee C, Lee BK, Beck S, Anjum A, Cook KR, Popowski M, Tucker HO, Kim J. Corrigendum: Arid3a is essential to execution of the first cell fate decision via direct embryonic and extraembryonic transcriptional regulation. Genes & Development. 29: 1890. PMID 26341560 |
0.817 |
|
| 2015 |
Das PP, Hendrix DA, Apostolou E, Buchner AH, Canver MC, Beyaz S, Ljuboja D, Kuintzle R, Kim W, Karnik R, Shao Z, Xie H, Xu J, De Los Angeles A, Zhang Y, ... ... Kim J, et al. PRC2 Is Required to Maintain Expression of the Maternal Gtl2-Rian-Mirg Locus by Preventing De Novo DNA Methylation in Mouse Embryonic Stem Cells. Cell Reports. 12: 1456-1470. PMID 26299972 DOI: 10.1016/J.Celrep.2015.07.053 |
0.773 |
|
| 2015 |
Beck S, Lee BK, Kim J. Multi-layered global gene regulation in mouse embryonic stem cells. Cellular and Molecular Life Sciences : Cmls. 72: 199-216. PMID 25227241 DOI: 10.1007/S00018-014-1734-9 |
0.855 |
|
| 2014 |
Beck S, Lee BK, Rhee C, Song J, Woo AJ, Kim J. CpG island-mediated global gene regulatory modes in mouse embryonic stem cells. Nature Communications. 5: 5490. PMID 25405324 DOI: 10.1038/Ncomms6490 |
0.835 |
|
| 2014 |
Rhee C, Lee BK, Beck S, Anjum A, Cook KR, Popowski M, Tucker HO, Kim J. Arid3a is essential to execution of the first cell fate decision via direct embryonic and extraembryonic transcriptional regulation. Genes & Development. 28: 2219-32. PMID 25319825 DOI: 10.1101/Gad.247163.114 |
0.853 |
|
| 2014 |
Ki S, Park D, Selden HJ, Seita J, Chung H, Kim J, Iyer VR, Ehrlich LI. Global transcriptional profiling reveals distinct functions of thymic stromal subsets and age-related changes during thymic involution. Cell Reports. 9: 402-15. PMID 25284794 DOI: 10.1016/J.Celrep.2014.08.070 |
0.809 |
|
| 2014 |
Kim MY, Park J, Lee JJ, Ha DH, Kim J, Kim CG, Hwang J, Kim CG. Staufen1-mediated mRNA decay induces Requiem mRNA decay through binding of Staufen1 to the Requiem 3'UTR. Nucleic Acids Research. 42: 6999-7011. PMID 24799437 DOI: 10.1093/Nar/Gku388 |
0.312 |
|
| 2014 |
Das PP, Shao Z, Beyaz S, Apostolou E, Pinello L, De Los Angeles A, O'Brien K, Atsma JM, Fujiwara Y, Nguyen M, Ljuboja D, Guo G, Woo A, Yuan GC, Onder T, ... ... Kim J, et al. Distinct and combinatorial functions of Jmjd2b/Kdm4b and Jmjd2c/Kdm4c in mouse embryonic stem cell identity. Molecular Cell. 53: 32-48. PMID 24361252 DOI: 10.1016/J.Molcel.2013.11.011 |
0.817 |
|
| 2013 |
Woo AJ, Wieland K, Huang H, Akie TE, Piers T, Kim J, Cantor AB. Developmental differences in IFN signaling affect GATA1s-induced megakaryocyte hyperproliferation. The Journal of Clinical Investigation. PMID 23863621 DOI: 10.1172/Jci40609 |
0.333 |
|
| 2013 |
Baena E, Shao Z, Linn DE, Glass K, Hamblen MJ, Fujiwara Y, Kim J, Nguyen M, Zhang X, Godinho FJ, Bronson RT, Mucci LA, Loda M, Yuan GC, Orkin SH, et al. ETV1 directs androgen metabolism and confers aggressive prostate cancer in targeted mice and patients. Genes & Development. 27: 683-98. PMID 23512661 DOI: 10.1101/Gad.211011.112 |
0.502 |
|
| 2013 |
Lee JH, Kim J, Gludish D, Roach RR, Saunders AH, Barrios J, Woo AJ, Chen H, Conner DA, Fujiwara Y, Stripp BR, Kim CF. Surfactant protein-C chromatin-bound green fluorescence protein reporter mice reveal heterogeneity of surfactant protein C-expressing lung cells. American Journal of Respiratory Cell and Molecular Biology. 48: 288-98. PMID 23204392 DOI: 10.1165/Rcmb.2011-0403Oc |
0.445 |
|
| 2013 |
Park KS, Cha Y, Kim CH, Ahn HJ, Kim D, Ko S, Kim KH, Chang MY, Ko JH, Noh YS, Han YM, Kim J, Song J, Kim JY, Tesar PJ, et al. Transcription elongation factor Tcea3 regulates the pluripotent differentiation potential of mouse embryonic stem cells via the Lefty1-Nodal-Smad2 pathway. Stem Cells (Dayton, Ohio). 31: 282-92. PMID 23169579 DOI: 10.1002/Stem.1284 |
0.566 |
|
| 2013 |
Baena E, Shao Z, Linn D, Glass K, Hamblen M, Fujiwara Y, Kim J, Nguyen M, Zhang X, Godinho F, Bronson RT, Mucci L, Loda M, Yuan G, Li Z, et al. Abstract 5393: ETV1 directs androgen metabolism and confers aggressive prostate cancer in engineered mice and patients. Cancer Research. 73: 5393-5393. DOI: 10.1158/1538-7445.Am2013-5393 |
0.488 |
|
| 2012 |
Kim J, Di Vizio D, Kim TK, Kim J, Kim M, Pelton K, Clinton SK, Hai T, Hwang D, Solomon KR, Freeman MR. The response of the prostate to circulating cholesterol: activating transcription factor 3 (ATF3) as a prominent node in a cholesterol-sensing network. Plos One. 7: e39448. PMID 22768301 DOI: 10.1371/Journal.Pone.0039448 |
0.305 |
|
| 2012 |
Baena E, Shao Z, Linn D, Hamblen M, Glass K, Saumyadipta P, Fujiwara Y, Godinho F, Kim J, Al-Shhrour F, Nguyen M, Yuan G, Bronson RT, Loda M, Orkin SH, et al. Abstract 2965: ERG and ETV1 regulate a common transcriptional network in prostate cells but in an opposite fashion Cancer Research. 72: 2965-2965. DOI: 10.1158/1538-7445.Am2012-2965 |
0.508 |
|
| 2011 |
Kim J, Orkin SH. Embryonic stem cell-specific signatures in cancer: insights into genomic regulatory networks and implications for medicine. Genome Medicine. 3: 75. PMID 22126538 DOI: 10.1186/Gm291 |
0.651 |
|
| 2011 |
Woo AJ, Kim J, Xu J, Huang H, Cantor AB. Role of ZBP-89 in human globin gene regulation and erythroid differentiation. Blood. 118: 3684-93. PMID 21828133 DOI: 10.1182/Blood-2011-03-341446 |
0.515 |
|
| 2010 |
Kim J, Woo AJ, Chu J, Snow JW, Fujiwara Y, Kim CG, Cantor AB, Orkin SH. A Myc network accounts for similarities between embryonic stem and cancer cell transcription programs. Cell. 143: 313-24. PMID 20946988 DOI: 10.1016/J.Cell.2010.09.010 |
0.612 |
|
| 2010 |
Bai X, Kim J, Yang Z, Jurynec MJ, Akie TE, Lee J, LeBlanc J, Sessa A, Jiang H, DiBiase A, Zhou Y, Grunwald DJ, Lin S, Cantor AB, Orkin SH, et al. TIF1gamma controls erythroid cell fate by regulating transcription elongation. Cell. 142: 133-43. PMID 20603019 DOI: 10.1016/J.Cell.2010.05.028 |
0.686 |
|
| 2010 |
Snow JW, Kim J, Currie CR, Xu J, Orkin SH. Sumoylation regulates interaction of FOG1 with C-terminal-binding protein (CTBP). The Journal of Biological Chemistry. 285: 28064-75. PMID 20587419 DOI: 10.1074/Jbc.M109.096909 |
0.577 |
|
| 2010 |
Kim J, Orkin SH. Systematic tracking of cell fate changes. Nature Biotechnology. 28: 146-7. PMID 20139953 DOI: 10.1038/Nbt0210-146 |
0.582 |
|
| 2010 |
Kang JH, Oishi J, Kim JH, Ijuin M, Toita R, Jun B, Asai D, Mori T, Niidome T, Tanizawa K, Kuroda S, Katayama Y. Hepatoma-targeted gene delivery using a tumor cell-specific gene regulation system combined with a human liver cell-specific bionanocapsule. Nanomedicine : Nanotechnology, Biology, and Medicine. 6: 583-9. PMID 20138242 DOI: 10.1016/j.nano.2010.01.007 |
0.317 |
|
| 2010 |
Woo AJ, Kim J, Xu J, Huang H, Cantor A. Role of the Krüppel-Type Zinc Finger Transcription Factor ZBP-89 In Human Globin Gene Regulation and Erythroid Development Blood. 116: 2067-2067. DOI: 10.1182/Blood.V116.21.2067.2067 |
0.481 |
|
| 2009 |
Trowbridge JJ, Snow JW, Kim J, Orkin SH. DNA methyltransferase 1 is essential for and uniquely regulates hematopoietic stem and progenitor cells. Cell Stem Cell. 5: 442-9. PMID 19796624 DOI: 10.1182/Blood.V114.22.392.392 |
0.604 |
|
| 2009 |
Hu G, Kim J, Xu Q, Leng Y, Orkin SH, Elledge SJ. A genome-wide RNAi screen identifies a new transcriptional module required for self-renewal Genes and Development. 23: 837-848. PMID 19339689 DOI: 10.1101/Gad.1769609 |
0.656 |
|
| 2009 |
Kim J, Cantor AB, Orkin SH, Wang J. Use of in vivo biotinylation to study protein-protein and protein-DNA interactions in mouse embryonic stem cells. Nature Protocols. 4: 506-17. PMID 19325547 DOI: 10.1038/Nprot.2009.23 |
0.536 |
|
| 2008 |
Orkin SH, Wang J, Kim J, Chu J, Rao S, Theunissen TW, Shen X, Levasseur DN. The transcriptional network controlling pluripotency in ES cells Cold Spring Harbor Symposia On Quantitative Biology. 73: 195-202. PMID 19478325 DOI: 10.1101/Sqb.2008.72.001 |
0.664 |
|
| 2008 |
Shen X, Liu Y, Hsu YJ, Fujiwara Y, Kim J, Mao X, Yuan GC, Orkin SH. EZH1 mediates methylation on histone H3 lysine 27 and complements EZH2 in maintaining stem cell identity and executing pluripotency. Molecular Cell. 32: 491-502. PMID 19026780 DOI: 10.1016/J.Molcel.2008.10.016 |
0.623 |
|
| 2008 |
Kim J, Chu J, Shen X, Wang J, Orkin SH. An extended transcriptional network for pluripotency of embryonic stem cells. Cell. 132: 1049-61. PMID 18358816 DOI: 10.1016/J.Cell.2008.02.039 |
0.643 |
|
| 2008 |
Kim J, Lee JH, Iyer VR. Global identification of Myc target genes reveals its direct role in mitochondrial biogenesis and its E-box usage in vivo. Plos One. 3: e1798. PMID 18335064 DOI: 10.1371/Journal.Pone.0001798 |
0.789 |
|
| 2008 |
Kim J, Chu J, Shen X, Wang J, Orkin SH. An Extended Transcriptional Network for Pluripotency of Embryonic Stem Cells (DOI:10.1016/j.cell.2008.02.039) Cell. 133. DOI: 10.1016/J.Cell.2008.06.004 |
0.624 |
|
| 2007 |
Saleque S, Kim J, Rooke HM, Orkin SH. Epigenetic regulation of hematopoietic differentiation by Gfi-1 and Gfi-1b is mediated by the cofactors CoREST and LSD1. Molecular Cell. 27: 562-72. PMID 17707228 DOI: 10.1016/J.Molcel.2007.06.039 |
0.579 |
|
| 2007 |
Birney E, Stamatoyannopoulos JA, Dutta A, Guigó R, Gingeras TR, Margulies EH, Weng Z, Snyder M, Dermitzakis ET, Thurman RE, Kuehn MS, Taylor CM, Neph S, Koch CM, ... ... Kim J, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature. 447: 799-816. PMID 17571346 DOI: 10.1038/Nature05874 |
0.797 |
|
| 2007 |
Bhinge AA, Kim J, Euskirchen GM, Snyder M, Iyer VR. Mapping the chromosomal targets of STAT1 by Sequence Tag Analysis of Genomic Enrichment (STAGE). Genome Research. 17: 910-6. PMID 17568006 DOI: 10.1101/Gr.5574907 |
0.812 |
|
| 2007 |
Giresi PG, Kim J, McDaniell RM, Iyer VR, Lieb JD. FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin. Genome Research. 17: 877-85. PMID 17179217 DOI: 10.1101/Gr.5533506 |
0.756 |
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| 2005 |
Kim J, Iyer VR. Identifying chromosomal targets of DNA-binding proteins by Sequence Tag Analysis of Genomic Enrichment (STAGE). Current Protocols in Molecular Biology / Edited by Frederick M. Ausubel ... [Et Al.]. Unit 21.10. PMID 18265357 DOI: 10.1002/0471142727.Mb2110S72 |
0.723 |
|
| 2005 |
Kim J, Bhinge AA, Morgan XC, Iyer VR. Mapping DNA-protein interactions in large genomes by sequence tag analysis of genomic enrichment. Nature Methods. 2: 47-53. PMID 15782160 DOI: 10.1038/Nmeth726 |
0.807 |
|
| 2004 |
Kim J, Iyer VR. Global role of TATA box-binding protein recruitment to promoters in mediating gene expression profiles. Molecular and Cellular Biology. 24: 8104-12. PMID 15340072 DOI: 10.1128/Mcb.24.18.8104-8112.2004 |
0.786 |
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