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Grace Brannigan, Ph.D. - Publications

Affiliations: 
Physics Rutgers University, Camden 
Area:
Computational Biophysics, Membrane Protein Pharmacology
Website:
Branniganlab.wordpress

43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Sharp L, Brannigan G. Spontaneous lipid binding to the nicotinic acetylcholine receptor in a native membrane. The Journal of Chemical Physics. 154: 185102. PMID 34241006 DOI: 10.1063/5.0046333  1
2021 Joseph TT, Bu W, Lin W, Zoubak L, Yeliseev A, Liu R, Eckenhoff RG, Brannigan G. Ketamine Metabolite (2,6)-Hydroxynorketamine Interacts with μ and κ Opioid Receptors. Acs Chemical Neuroscience. PMID 33905229 DOI: 10.1021/acschemneuro.0c00741  1
2020 Lohia R, Bassi K, Hansen M, Brannigan G. Disease Associated Mutations in Intrinsically Disordered Proteins Show Evidence of Enrichment in Hydrophobic Blobs Biophysical Journal. 118. DOI: 10.1016/J.Bpj.2019.11.1280  1
2019 Böhm R, Amodeo GF, Murlidaran S, Chavali S, Wagner G, Winterhalter M, Brannigan G, Hiller S. The Structural Basis for Low Conductance in the Membrane Protein VDAC upon β-NADH Binding and Voltage Gating. Structure (London, England : 1993). PMID 31862297 DOI: 10.1016/J.Str.2019.11.015  1
2019 Tong A, Petroff JT, Hsu FF, Schmidpeter PA, Nimigean CM, Sharp L, Brannigan G, Cheng WW. Direct binding of phosphatidylglycerol at specific sites modulates desensitization of a ligand-gated ion channel. Elife. 8. PMID 31724949 DOI: 10.7554/Elife.50766  1
2019 McKinstry-Wu A, Woll KA, Joseph T, Bu W, White ER, Bhanu NV, Garcia BA, Brannigan G, Dailey WP, Eckenhoff RG. Azi-medetomidine: Synthesis and Characterization of a Novel α2 Adrenergic Photoaffinity Ligand. Acs Chemical Neuroscience. PMID 31638765 DOI: 10.1021/Acschemneuro.9B00484  1
2019 Lohia R, Salari R, Brannigan G. Sequence specificity despite intrinsic disorder: How a disease-associated Val/Met polymorphism rearranges tertiary interactions in a long disordered protein. Plos Computational Biology. 15: e1007390. PMID 31626641 DOI: 10.1371/Journal.Pcbi.1007390  1
2019 Hénault CM, Govaerts C, Spurny R, Brams M, Estrada-Mondragon A, Lynch J, Bertrand D, Pardon E, Evans GL, Woods K, Elberson BW, Cuello LG, Brannigan G, Nury H, Steyaert J, et al. A lipid site shapes the agonist response of a pentameric ligand-gated ion channel. Nature Chemical Biology. PMID 31591563 DOI: 10.1038/S41589-019-0369-4  1
2019 Moffett SX, Klein EA, Brannigan G, Martin JV. L-3,3',5-triiodothyronine and pregnenolone sulfate inhibit Torpedo nicotinic acetylcholine receptors. Plos One. 14: e0223272. PMID 31584962 DOI: 10.1371/Journal.Pone.0223272  1
2019 Woods K, Sharp L, Brannigan G. Untangling Direct and Domain-Mediated Interactions Between Nicotinic Acetylcholine Receptors in DHA-Rich Membranes. The Journal of Membrane Biology. PMID 31321460 DOI: 10.1007/S00232-019-00079-0  1
2019 Sharp L, Salari R, Brannigan G. Boundary lipids of the nicotinic acetylcholine receptor: Spontaneous partitioning via coarse-grained molecular dynamics simulation. Biochimica Et Biophysica Acta. Biomembranes. PMID 30664881 DOI: 10.1016/J.Bbamem.2019.01.005  1
2019 Tong A, Petroff JT, Hsu F, Schmidpeter PA, Nimigean CM, Sharp L, Brannigan G, Cheng WW. Author response: Direct binding of phosphatidylglycerol at specific sites modulates desensitization of a ligand-gated ion channel Elife. DOI: 10.7554/Elife.50766.024  1
2018 Salari R, Joseph T, Lohia R, Hénin J, Brannigan G. A streamlined, general approach for computing ligand binding free energies and its application to GPCR-bound cholesterol. Journal of Chemical Theory and Computation. PMID 30358394 DOI: 10.1021/Acs.Jctc.8B00447  1
2018 Murlidaran S, Brannigan G. Physical Accuracy Leads to Biological Relevance: Best Practices For Simulating Ligand-Gated Ion Channels Interacting With General Anesthetics. Methods in Enzymology. 602: 3-24. PMID 29588036 DOI: 10.1016/Bs.Mie.2018.02.001  1
2016 Woll KA, Dailey WP, Brannigan G, Eckenhoff RG. Shedding Light on Anesthetic Mechanisms: Application of Photoaffinity Ligands. Anesthesia and Analgesia. PMID 27464974 DOI: 10.1213/Ane.0000000000001365  1
2016 Woll KA, Murlidaran S, Pinch BJ, Hénin J, Wang X, Salari R, Covarrubias M, Dailey WP, Brannigan G, Garcia BA, Eckenhoff RG. A Novel Bifunctional Alkylphenol Anesthetic Allows Characterization of GABAA Receptor Subunit Binding Selectivity in Synaptosomes. The Journal of Biological Chemistry. PMID 27462076 DOI: 10.1074/Jbc.M116.736975  1
2015 Westergard T, Salari R, Martin JV, Brannigan G. Correction: Interactions of L-3,5,3'-Triiodothyronine, Allopregnanolone, and Ivermectin with the GABAA Receptor: Evidence for Overlapping Intersubunit Binding Modes. Plos One. 10: e0142514. PMID 26529248 DOI: 10.1371/journal.pone.0142514  1
2015 Westergard T, Salari R, Martin JV, Brannigan G. Interactions of L-3,5,4'-Triiodothyronine, Allopregnanolone, and Ivermectin with the GABAA Receptor: Evidence for Overlapping Intersubunit Binding Modes. Plos One. 10: e0139072. PMID 26421724 DOI: 10.1371/Journal.Pone.0139072  1
2015 Carswell CL, Hénault CM, Murlidaran S, Therien JP, Juranka PF, Surujballi JA, Brannigan G, Baenziger JE. Role of the Fourth Transmembrane α Helix in the Allosteric Modulation of Pentameric Ligand-Gated Ion Channels. Structure (London, England : 1993). 23: 1655-64. PMID 26235032 DOI: 10.1016/J.Str.2015.06.020  1
2015 Cournia Z, Allen TW, Andricioaei I, Antonny B, Baum D, Brannigan G, Buchete NV, Deckman JT, Delemotte L, Del Val C, Friedman R, Gkeka P, Hege HC, Hénin J, Kasimova MA, et al. Membrane Protein Structure, Function, and Dynamics: a Perspective from Experiments and Theory. The Journal of Membrane Biology. 248: 611-40. PMID 26063070 DOI: 10.1007/S00232-015-9802-0  1
2015 Hénault CM, Carswell CL, Murlidaran S, Therien JD, Juranka PF, Surujballi JA, Brannigan G, Baenziger JE. Role of the Transmembrane α-Helix M4 in the Potentiation of Pentameric Ligand-Gated Ion Channels Biophysical Journal. 108: 432a. DOI: 10.1016/J.Bpj.2014.11.2359  1
2014 Salari R, Murlidaran S, Brannigan G. Pentameric Ligand-gated Ion Channels : Insights from Computation. Molecular Simulation. 40: 821-829. PMID 25931676 DOI: 10.1080/08927022.2014.896462  1
2014 Weiser BP, Salari R, Eckenhoff RG, Brannigan G. Computational investigation of cholesterol binding sites on mitochondrial VDAC. The Journal of Physical Chemistry. B. 118: 9852-60. PMID 25080204 DOI: 10.1021/Jp504516A  1
2014 Hénin J, Salari R, Murlidaran S, Brannigan G. A predicted binding site for cholesterol on the GABAA receptor Biophysical Journal. 106: 1938-1949. PMID 24806926 DOI: 10.1016/J.Bpj.2014.03.024  1
2014 Salari R, Murlidaran S, Brannigan G. Pentameric ligand-gated ion channels: Insights from computation Molecular Simulation. 40: 821-829. DOI: 10.1080/08927022.2014.896462  1
2014 Weiser BP, Salari R, Eckenhoff RG, Brannigan G. Computational investigation of cholesterol binding sites on mitochondrial VDAC Journal of Physical Chemistry B. 118: 9852-9860. DOI: 10.1021/jp504516a  1
2014 Carswell CL, Hénault CM, Murlidaran S, Therien JPD, Juranka PF, Surujballi JA, Brannigan G, Baenziger JE. Role of the Fourth Transmembrane α Helix in the Allosteric Modulation of Pentameric Ligand-Gated Ion Channels Structure. DOI: 10.1016/j.str.2015.06.020  1
2012 LeBard DN, Hénin J, Eckenhoff RG, Klein ML, Brannigan G. General anesthetics predicted to block the GLIC pore with micromolar affinity Plos Computational Biology. 8. PMID 22693438 DOI: 10.1371/Journal.Pcbi.1002532  1
2010 Brannigan G, LeBard DN, Hénin J, Eckenhoff RG, Klein ML. Multiple binding sites for the general anesthetic isoflurane identified in the nicotinic acetylcholine receptor transmembrane domain Proceedings of the National Academy of Sciences of the United States of America. 107: 14122-14127. PMID 20660787 DOI: 10.1073/Pnas.1008534107  1
2010 Hénin J, Brannigan G, Dailey WP, Eckenhoff R, Klein ML. An atomistic model for simulations of the general anesthetic isoflurane. The Journal of Physical Chemistry. B. 114: 604-12. PMID 19924847 DOI: 10.1021/Jp9088035  1
2009 Vedula LS, Brannigan G, Economou NJ, Xi J, Hall MA, Liu R, Rossi MJ, Dailey WP, Grasty KC, Klein ML, Eckenhoff RG, Loll PJ. A unitary anesthetic binding site at high resolution. The Journal of Biological Chemistry. 284: 24176-84. PMID 19605349 DOI: 10.1074/Jbc.M109.017814  1
2009 Butts CA, Xi J, Brannigan G, Saad AA, Venkatachalan SP, Pearce RA, Klein ML, Eckenhoff RG, Dmochowski IJ. Identification of a fluorescent general anesthetic, 1-aminoanthracene. Proceedings of the National Academy of Sciences of the United States of America. 106: 6501-6. PMID 19346473 DOI: 10.1073/Pnas.0810590106  1
2008 Brannigan G, Hénin J, Law R, Eckenhoff R, Klein ML. Embedded cholesterol in the nicotinic acetylcholine receptor Proceedings of the National Academy of Sciences of the United States of America. 105: 14418-14423. PMID 18768796 DOI: 10.1073/Pnas.0803029105  1
2007 Brannigan G, Brown FLH. Contributions of Gaussian curvature and nonconstant lipid volume to protein deformation of lipid bilayers Biophysical Journal. 92: 864-876. PMID 17098794 DOI: 10.1529/Biophysj.106.094953  1
2006 Brannigan G, Brown FLH. A consistent model for thermal fluctuations and protein-induced deformations in lipid bilayers Biophysical Journal. 90: 1501-1520. PMID 16326916 DOI: 10.1529/Biophysj.105.075838  1
2006 Brannigan G, Lin LCL, Brown FLH. Implicit solvent simulation models for biomembranes European Biophysics Journal. 35: 104-124. PMID 16187129 DOI: 10.1007/S00249-005-0013-Y  1
2005 Brannigan G, Philips PF, Brown FLH. Flexible lipid bilayers in implicit solvent Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 72. PMID 16090009 DOI: 10.1103/Physreve.72.011915  1
2005 Brannigan G, Brown FL. Composition dependence of bilayer elasticity. The Journal of Chemical Physics. 122: 074905. PMID 15743268 DOI: 10.1063/1.1851983  1
2005 Brannigan G, Brown FLH. Composition dependence of bilayer elasticity Journal of Chemical Physics. 122. DOI: 10.1063/1.1851983  1
2004 Brannigan G, Tamboli AC, Brown FL. The role of molecular shape in bilayer elasticity and phase behavior. The Journal of Chemical Physics. 121: 3259-71. PMID 15291638 DOI: 10.1063/1.1770569  1
2004 Brannigan G, Brown FLH. Solvent-free simulations of fluid membrane bilayers. The Journal of Chemical Physics.. 120: 1059-1071. PMID 15267943 DOI: 10.1063/1.1625913  1
2004 Brannigan G, Tamboli AC, Brown FLH. The role of molecular shape in bilayer elasticity and phase behavior Journal of Chemical Physics. 121: 3259-3271. DOI: 10.1063/1.1770569  1
2001 Brannigan G, De Alcantara Bonfim OF. Boundary effects on forced drainage through aqueous foam Philosophical Magazine Letters. 81: 197-201. DOI: 10.1080/09500830010017079  1
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