| Year |
Citation |
Score |
| 2024 |
Strickland K, Jones ME, Storfer A, Hamede RK, Hohenlohe PA, Margres MJ, McCallum HI, Comte S, Lachish S, Kruuk LEB. Adaptive potential in the face of a transmissible cancer in Tasmanian devils. Molecular Ecology. e17531. PMID 39340219 DOI: 10.1111/mec.17531 |
0.302 |
|
| 2024 |
Beer MA, Trumbo DR, Rautsaw RM, Kozakiewicz CP, Epstein B, Hohenlohe PA, Alford RA, Schwarzkopf L, Storfer A. Spatial variation in genomic signatures of local adaptation during the cane toad invasion of Australia. Molecular Ecology. e17464. PMID 38994885 DOI: 10.1111/mec.17464 |
0.325 |
|
| 2024 |
Lukaszewicz M, Salia OI, Hohenlohe PA, Buzbas EO. Approximate Bayesian computational methods to estimate the strength of divergent selection in population genomics models. Journal of Computational Mathematics and Data Science. 10. PMID 38616846 DOI: 10.1016/j.jcmds.2024.100091 |
0.326 |
|
| 2024 |
Clancey E, MacPherson A, Cheek RG, Mouton JC, Sillett TS, Ghalambor CK, Funk WC, Hohenlohe PA. Unraveling Adaptive Evolutionary Divergence at Microgeographic Scales. The American Naturalist. 203: E35-E49. PMID 38306284 DOI: 10.1086/727723 |
0.361 |
|
| 2024 |
Beer MA, Proft KM, Veillet A, Kozakiewicz CP, Hamilton DG, Hamede R, McCallum H, Hohenlohe PA, Burridge CP, Margres MJ, Jones ME, Storfer A. Disease-driven top predator decline affects mesopredator population genomic structure. Nature Ecology & Evolution. PMID 38191839 DOI: 10.1038/s41559-023-02265-9 |
0.326 |
|
| 2023 |
Dean LL, Magalhaes IS, D'Agostino D, Hohenlohe P, MacColl ADC. On the origins of phenotypic parallelism in benthic and limnetic stickleback. Molecular Biology and Evolution. PMID 37652053 DOI: 10.1093/molbev/msad191 |
0.335 |
|
| 2023 |
Tumendemberel O, Hendricks SA, Hohenlohe PA, Sullivan J, Zedrosser A, Saebø M, Proctor MF, Koprowski JL, Waits LP. Range-wide evolutionary relationships and historical demography of brown bears (Ursus arctos) revealed by whole-genome sequencing of isolated central Asian populations. Molecular Ecology. 32: 5156-5169. PMID 37528604 DOI: 10.1111/mec.17091 |
0.381 |
|
| 2023 |
van Elst T, Schüßler D, Rakotondravony R, Rovanirina VST, Veillet A, Hohenlohe PA, Ratsimbazafy JH, Rasoloarison RM, Rasoloharijaona S, Randrianambinina B, Ramilison ML, Yoder AD, Louis EE, Radespiel U. Diversification processes in Gerp's mouse lemur demonstrate the importance of rivers and altitude as biogeographic barriers in Madagascar's humid rainforests. Ecology and Evolution. 13: e10254. PMID 37408627 DOI: 10.1002/ece3.10254 |
0.35 |
|
| 2023 |
Grossfurthner LP, Milano ER, Hohenlohe PA, Waits LP, Richardson BA. Population structure and hybridization under contemporary and future climates in a heteroploid foundational shrub species (). Frontiers in Plant Science. 14: 1155868. PMID 37284723 DOI: 10.3389/fpls.2023.1155868 |
0.319 |
|
| 2022 |
Clark EI, Bitume EV, Bean DW, Stahlke AR, Hohenlohe PA, Hufbauer RA. Evolution of reproductive life-history and dispersal traits during the range expansion of a biological control agent. Evolutionary Applications. 15: 2089-2099. PMID 36540644 DOI: 10.1111/eva.13502 |
0.32 |
|
| 2022 |
Andrews KR, Seaborn T, Egan JP, Fagnan MW, New DD, Chen Z, Hohenlohe PA, Waits LP, Caudill CC, Narum SR. Whole genome resequencing identifies local adaptation associated with environmental variation for redband trout. Molecular Ecology. PMID 36478624 DOI: 10.1111/mec.16810 |
0.351 |
|
| 2022 |
Hendricks SA, King JL, Duncan CL, Vickers W, Hohenlohe PA, Davis BW. Genomic Assessment of Cancer Susceptibility in the Threatened Catalina Island Fox (). Genes. 13. PMID 36011407 DOI: 10.3390/genes13081496 |
0.335 |
|
| 2022 |
Poelstra JW, Montero BK, Lüdemann J, Yang Z, Rakotondranary SJ, Hohenlohe P, Stetter N, Ganzhorn JU, Yoder AD. RADseq data reveal a lack of admixture in a mouse lemur contact zone contrary to previous microsatellite results. Proceedings. Biological Sciences. 289: 20220596. PMID 35946151 DOI: 10.1098/rspb.2022.0596 |
0.338 |
|
| 2021 |
Stahlke AR, Bitume EV, Özsoy ZA, Bean DW, Veillet A, Clark MI, Clark EI, Moran P, Hufbauer RA, Hohenlohe PA. Hybridization and range expansion in tamarisk beetles ( spp.) introduced to North America for classical biological control. Evolutionary Applications. 15: 60-77. PMID 35126648 DOI: 10.1111/eva.13325 |
0.354 |
|
| 2021 |
Barbosa S, Andrews KR, Goldberg AR, Gour DS, Hohenlohe PA, Conway CJ, Waits LP. The role of neutral and adaptive genomic variation in population diversification and speciation in two ground squirrel species of conservation concern. Molecular Ecology. PMID 34324748 DOI: 10.1111/mec.16096 |
0.352 |
|
| 2021 |
Stahlke AR, Epstein B, Barbosa S, Margres MJ, Patton AH, Hendricks SA, Veillet A, Fraik AK, Schönfeld B, McCallum HI, Hamede R, Jones ME, Storfer A, Hohenlohe PA. Contemporary and historical selection in Tasmanian devils () support novel, polygenic response to transmissible cancer. Proceedings. Biological Sciences. 288: 20210577. PMID 34034517 DOI: 10.1098/rspb.2021.0577 |
0.308 |
|
| 2020 |
Magalhaes IS, Whiting JR, D'Agostino D, Hohenlohe PA, Mahmud M, Bell MA, Skúlason S, MacColl ADC. Intercontinental genomic parallelism in multiple three-spined stickleback adaptive radiations. Nature Ecology & Evolution. PMID 33257817 DOI: 10.1038/s41559-020-01341-8 |
0.334 |
|
| 2020 |
Hohenlohe PA, Funk WC, Rajora OP. Population genomics for wildlife conservation and management. Molecular Ecology. PMID 33145846 DOI: 10.1111/mec.15720 |
0.339 |
|
| 2020 |
Maselko J, Andrews KR, Hohenlohe PA. Long-lived marine species may be resilient to environmental variability through a temporal portfolio effect. Ecology and Evolution. 10: 6435-6448. PMID 32724524 DOI: 10.1002/Ece3.6378 |
0.408 |
|
| 2020 |
Kozakiewicz CP, Ricci L, Patton AH, Stahlke AR, Hendricks SA, Margres MJ, Ruiz-Aravena M, Hamilton DG, Hamede R, McCallum H, Jones ME, Hohenlohe PA, Storfer A. Comparative landscape genetics reveals differential effects of environment on host and pathogen genetic structure in Tasmanian devils (Sarcophilus harrisii) and their transmissible tumor. Molecular Ecology. PMID 32682353 DOI: 10.1111/Mec.15558 |
0.369 |
|
| 2020 |
Poelstra J, Salmona J, Tiley GP, Schüßler D, Blanco MB, Andriambeloson JB, Bouchez O, Campbell CR, Etter PD, Hohenlohe PA, Hunnicutt KE, Iribar A, Johnson EA, Kappeler PM, Larsen PA, et al. Cryptic Patterns of Speciation in Cryptic Primates: Microendemic Mouse Lemurs and the Multispecies Coalescent. Systematic Biology. PMID 32642760 DOI: 10.1093/Sysbio/Syaa053 |
0.35 |
|
| 2020 |
Fraik AK, Margres MJ, Epstein B, Barbosa S, Jones M, Hendricks S, Schönfeld B, Stahlke AR, Veillet A, Hamede R, McCallum H, Lopez-Contreras E, Kallinen SJ, Hohenlohe PA, Kelley JL, et al. Disease swamps molecular signatures of genetic-environmental associations to abiotic factors in Tasmanian devil (Sarcophilus harrisii) populations. Evolution; International Journal of Organic Evolution. PMID 32445281 DOI: 10.1111/Evo.14023 |
0.406 |
|
| 2020 |
Stahlke A, Bell D, Dhendup T, Kern B, Pannoni S, Robinson Z, Strait J, Smith S, Hand BK, Hohenlohe PA, Luikart G. Population genomics training for the next generation of conservation geneticists: ConGen 2018 Workshop. The Journal of Heredity. PMID 32037446 DOI: 10.1093/Jhered/Esaa001 |
0.382 |
|
| 2020 |
Hoban S, Bruford M, Jackson JD, Lopes-Fernandes M, Heuertz M, Hohenlohe PA, Paz-Vinas I, Sjögren-Gulve P, Segelbacher G, Vernesi C, Aitken S, Bertola LD, Bloomer P, Breed M, Rodríguez-Correa H, et al. Genetic diversity targets and indicators in the CBD post-2020 Global Biodiversity Framework must be improved Biological Conservation. 248: 108654. DOI: 10.1016/J.Biocon.2020.108654 |
0.412 |
|
| 2020 |
Clendenin HR, Adams JR, Ausband DE, Hayden JA, Hohenlohe PA, Waits LP. Combining Harvest and Genetics to Estimate Reproduction in Wolves Journal of Wildlife Management. 84: 492-504. DOI: 10.1002/Jwmg.21820 |
0.34 |
|
| 2019 |
Fraik AK, Quackenbush C, Margres MJ, Comte S, Hamilton DG, Kozakiewicz CP, Jones M, Hamede R, Hohenlohe PA, Storfer A, Kelley JL. Transcriptomics of Tasmanian Devil () Ear Tissue Reveals Homogeneous Gene Expression Patterns across a Heterogeneous Landscape. Genes. 10. PMID 31614864 DOI: 10.3390/Genes10100801 |
0.369 |
|
| 2019 |
Hohenlohe PA, McCallum HI, Jones ME, Lawrance MF, Hamede RK, Storfer A. Conserving adaptive potential: lessons from Tasmanian devils and their transmissible cancer. Conservation Genetics (Print). 20: 81-87. PMID 31551664 DOI: 10.1007/S10592-019-01157-5 |
0.469 |
|
| 2019 |
Patton AH, Margres MJ, Stahlke AR, Hendricks S, Lewallen K, Hamede RK, Ruiz-Aravena M, Ryder O, McCallum HI, Jones ME, Hohenlohe PA, Storfer A. Contemporary demographic reconstruction methods are robust to genome assembly quality: A case study in Tasmanian Devils. Molecular Biology and Evolution. PMID 31424552 DOI: 10.1093/Molbev/Msz191 |
0.38 |
|
| 2019 |
Wells K, Hamede RK, Jones ME, Hohenlohe PA, Storfer A, McCallum HI. Individual and temporal variation in pathogen load predicts long-term impacts of an emerging infectious disease. Ecology. e02613. PMID 30636287 DOI: 10.1002/Ecy.2613 |
0.316 |
|
| 2019 |
Hamilton DG, Jones ME, Cameron EZ, McCallum H, Storfer A, Hohenlohe PA, Hamede RK. Rate of intersexual interactions affects injury likelihood in Tasmanian devil contact networks Behavioral Ecology. 30: 1087-1095. DOI: 10.1093/Beheco/Arz054 |
0.306 |
|
| 2018 |
Heppenheimer E, Brzeski KE, Hinton JW, Patterson BR, Rutledge LY, DeCandia AL, Wheeldon T, Fain SR, Hohenlohe PA, Kays R, White BN, Chamberlain MJ, vonHoldt BM. High genomic diversity and candidate genes under selection associated with range expansion in eastern coyote () populations. Ecology and Evolution. 8: 12641-12655. PMID 30619570 DOI: 10.1002/Ece3.4688 |
0.45 |
|
| 2018 |
Heppenheimer E, Harrigan RJ, Rutledge LY, Koepfli KP, DeCandia AL, Brzeski KE, Benson JF, Wheeldon T, Patterson BR, Kays R, Hohenlohe PA, von Holdt BM. Population Genomic Analysis of North American Eastern Wolves (Canis lycaon) Supports Their Conservation Priority Status. Genes. 9. PMID 30518163 DOI: 10.3390/Genes9120606 |
0.447 |
|
| 2018 |
Margres MJ, Ruiz-Aravena M, Hamede R, Jones ME, Lawrance MF, Hendricks SA, Patton A, Davis BW, Ostrander EA, McCallum H, Hohenlohe PA, Storfer A. The genomic basis of tumor regression in Tasmanian devils (Sarcophilus harrisii). Genome Biology and Evolution. PMID 30321343 DOI: 10.1093/Gbe/Evy229 |
0.34 |
|
| 2018 |
Margres MJ, Jones M, Epstein B, Kerlin DH, Comte S, Fox S, Fraik AK, Hendricks SA, Huxtable S, Lachish S, Lazenby B, O'Rourke SM, Stahlke AR, Wiench CG, Hamede R, ... ... Hohenlohe PA, et al. Large-effect loci affect survival in Tasmanian devils (Sarcophilus harrisii) infected with a transmissible cancer. Molecular Ecology. PMID 30171778 DOI: 10.1111/Mec.14853 |
0.406 |
|
| 2018 |
Storfer A, Hohenlohe PA, Margres MJ, Patton A, Fraik AK, Lawrance M, Ricci LE, Stahlke AR, McCallum HI, Jones ME. The devil is in the details: Genomics of transmissible cancers in Tasmanian devils. Plos Pathogens. 14: e1007098. PMID 30071111 DOI: 10.1371/Journal.Ppat.1007098 |
0.329 |
|
| 2018 |
Hendricks SA, Schweizer RM, Harrigan RJ, Pollinger JP, Paquet PC, Darimont CT, Adams JR, Waits LP, vonHoldt BM, Hohenlohe PA, Wayne RK. Natural re-colonization and admixture of wolves (Canis lupus) in the US Pacific Northwest: challenges for the protection and management of rare and endangered taxa. Heredity. PMID 29880893 DOI: 10.1038/S41437-018-0094-X |
0.437 |
|
| 2018 |
Andrews KR, Adams JR, Cassirer EF, Plowright RK, Gardner C, Dwire M, Hohenlohe PA, Waits LP. A bioinformatic pipeline for identifying informative SNP panels for parentage assignment from RADseq data. Molecular Ecology Resources. PMID 29870119 DOI: 10.1111/1755-0998.12910 |
0.369 |
|
| 2018 |
Hendricks S, Anderson EC, Antao T, Bernatchez L, Forester BR, Garner B, Hand BK, Hohenlohe PA, Kardos M, Koop B, Sethuraman A, Waples RS, Luikart G. Recent advances in conservation and population genomics data analysis Evolutionary Applications. 11: 1197-1211. DOI: 10.1111/Eva.12659 |
0.394 |
|
| 2017 |
Hendricks S, Epstein B, Schönfeld B, Wiench C, Hamede R, Jones M, Storfer A, Hohenlohe P. Conservation implications of limited genetic diversity and population structure in Tasmanian devils (Sarcophilus harrisii). Conservation Genetics (Print). 18: 977-982. PMID 28966567 DOI: 10.1007/S10592-017-0939-5 |
0.475 |
|
| 2017 |
Hohenlohe PA, Rutledge LY, Waits LP, Andrews KR, Adams JR, Hinton JW, Nowak RM, Patterson BR, Wydeven AP, Wilson PA, White BN. Comment on "Whole-genome sequence analysis shows two endemic species of North American wolf are admixtures of the coyote and gray wolf". Science Advances. 3: e1602250. PMID 28630899 DOI: 10.1126/Sciadv.1602250 |
0.358 |
|
| 2017 |
Catchen JM, Hohenlohe PA, Bernatchez L, Funk WC, Andrews KR, Allendorf FW. Unbroken: RADseq remains a powerful tool for understanding the genetics of adaptation in natural populations. Molecular Ecology Resources. PMID 28319339 DOI: 10.1111/1755-0998.12669 |
0.451 |
|
| 2016 |
Kovach RP, Hand BK, Hohenlohe PA, Cosart TF, Boyer MC, Neville HH, Muhlfeld CC, Amish SJ, Carim K, Narum SR, Lowe WH, Allendorf FW, Luikart G. Vive la résistance: genome-wide selection against introduced alleles in invasive hybrid zones. Proceedings. Biological Sciences. 283. PMID 27881749 DOI: 10.1098/Rspb.2016.1380 |
0.46 |
|
| 2016 |
Cleary KA, Waits LP, Hohenlohe PA. Development and characterization of fourteen novel microsatellite markers for the chestnut short-tailed fruit bat (Carollia castanea), and cross-amplification to related species. Peerj. 4: e2465. PMID 27688969 DOI: 10.7717/Peerj.2465 |
0.375 |
|
| 2016 |
Epstein B, Jones M, Hamede R, Hendricks S, McCallum H, Murchison EP, Schönfeld B, Wiench C, Hohenlohe P, Storfer A. Rapid evolutionary response to a transmissible cancer in Tasmanian devils. Nature Communications. 7: 12684. PMID 27575253 DOI: 10.1038/Ncomms12684 |
0.36 |
|
| 2016 |
Trumbo DR, Epstein B, Hohenlohe PA, Alford RA, Schwarzkopf L, Storfer A. Mixed population genomics support for the central marginal hypothesis across the invasive range of the cane toad (Rhinella marina) in Australia. Molecular Ecology. PMID 27393238 DOI: 10.1111/Mec.13754 |
0.448 |
|
| 2016 |
Magalhaes IS, D'Agostino D, Hohenlohe PA, MacColl AD. The ecology of an adaptive radiation of three-spined stickleback from North Uist, Scotland. Molecular Ecology. PMID 27374399 DOI: 10.1111/Mec.13746 |
0.464 |
|
| 2016 |
Kim MS, Hohenlohe PA, Kim KH, Seo ST, Klopfenstein NB. Genetic diversity and population structure of Raffaelea quercus-mongolicae, a fungus associated with oak mortality in South Korea. Forest Pathology. 46: 164-167. PMID 27087782 DOI: 10.1111/Efp.12263 |
0.404 |
|
| 2016 |
Benestan L, Ferchaud AL, Hohenlohe P, Garner BA, Naylor GJ, Baums I, Schwartz M, Kelley JL, Luikart G. Conservation genomics of natural and managed populations: building a conceptual and practical framework. Molecular Ecology. PMID 27086132 DOI: 10.1111/Mec.13647 |
0.381 |
|
| 2016 |
Funk WC, Lovich RE, Hohenlohe PA, Hofman CA, Morrison SA, Sillett TS, Ghalambor CK, Maldonado JE, Rick TC, Day MD, Polato NR, Fitzpatrick SW, Coonan TJ, Crooks KR, Dillon A, et al. Adaptive divergence despite strong genetic drift: genomic analysis of the evolutionary mechanisms causing genetic differentiation in the island fox (Urocyon littoralis). Molecular Ecology. PMID 26992010 DOI: 10.1111/Mec.13605 |
0.489 |
|
| 2016 |
Gerritsen AT, New DD, Robison BD, Rashed A, Hohenlohe P, Forney L, Rashidi M, Wilson CM, Settles ML. Full Mitochondrial Genome Sequence of the Sugar Beet Wireworm Limonius californicus (Coleoptera: Elateridae), a Common Agricultural Pest. Genome Announcements. 4. PMID 26798113 DOI: 10.1128/Genomea.01628-15 |
0.318 |
|
| 2016 |
Andrews KR, Good JM, Miller MR, Luikart G, Hohenlohe PA. Harnessing the power of RADseq for ecological and evolutionary genomics. Nature Reviews. Genetics. PMID 26729255 DOI: 10.1038/Nrg.2015.28 |
0.419 |
|
| 2016 |
Rutledge LY, Devillard S, Hohenlohe PA, White BN. Considering all the evidence: A reply to Sefc and Koblmüller (2016) Biology Letters. 12. DOI: 10.1098/Rsbl.2015.1009 |
0.306 |
|
| 2015 |
Rutledge LY, Devillard S, Boone JQ, Hohenlohe PA, White BN. RAD sequencing and genomic simulations resolve hybrid origins within North American Canis. Biology Letters. 11. PMID 26156129 DOI: 10.1098/Rsbl.2015.0303 |
0.33 |
|
| 2015 |
MacPherson A, Hohenlohe PA, Nuismer SL. Trait dimensionality explains widespread variation in local adaptation. Proceedings. Biological Sciences / the Royal Society. 282. PMID 25631990 DOI: 10.1098/Rspb.2014.1570 |
0.343 |
|
| 2015 |
Hand BK, Hether TD, Kovach RP, Muhlfeld CC, Amish SJ, Boyer MC, O’Rourke SM, Miller MR, Lowe WH, Hohenlohe PA, Luikart G. Genomics and introgression: Discovery and mapping of thousands of species-diagnostic SNPs using RAD sequencing Current Zoology. 61: 146-154. DOI: 10.1093/Czoolo/61.1.146 |
0.406 |
|
| 2014 |
Stuart YE, Campbell TS, Hohenlohe PA, Reynolds RG, Revell LJ, Losos JB. Rapid evolution of a native species following invasion by a congener. Science (New York, N.Y.). 346: 463-6. PMID 25342801 DOI: 10.1126/Science.1257008 |
0.365 |
|
| 2014 |
Hohenlohe PA. Ecological genomics in full colour. Molecular Ecology. 23: 5129-31. PMID 25330852 DOI: 10.1111/Mec.12945 |
0.488 |
|
| 2014 |
Seehausen O, Butlin RK, Keller I, Wagner CE, Boughman JW, Hohenlohe PA, Peichel CL, Saetre GP, Bank C, Brännström A, Brelsford A, Clarkson CS, Eroukhmanoff F, Feder JL, Fischer MC, et al. Genomics and the origin of species. Nature Reviews. Genetics. 15: 176-92. PMID 24535286 DOI: 10.1038/Nrg3644 |
0.363 |
|
| 2014 |
Hether TD, Hohenlohe PA. Genetic regulatory network motifs constrain adaptation through curvature in the landscape of mutational (co)variance. Evolution; International Journal of Organic Evolution. 68: 950-64. PMID 24219635 DOI: 10.1111/Evo.12313 |
0.388 |
|
| 2013 |
Narum SR, Buerkle CA, Davey JW, Miller MR, Hohenlohe PA. Genotyping-by-sequencing in ecological and conservation genomics. Molecular Ecology. 22: 2841-7. PMID 23711105 DOI: 10.1111/Mec.12350 |
0.411 |
|
| 2013 |
Catchen J, Hohenlohe PA, Bassham S, Amores A, Cresko WA. Stacks: an analysis tool set for population genomics. Molecular Ecology. 22: 3124-40. PMID 23701397 DOI: 10.1111/Mec.12354 |
0.423 |
|
| 2013 |
Hohenlohe PA, Day MD, Amish SJ, Miller MR, Kamps-Hughes N, Boyer MC, Muhlfeld CC, Allendorf FW, Johnson EA, Luikart G. Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing. Molecular Ecology. 22: 3002-13. PMID 23432212 DOI: 10.1111/Mec.12239 |
0.417 |
|
| 2012 |
Jones AG, Bürger R, Arnold SJ, Hohenlohe PA, Uyeda JC. The effects of stochastic and episodic movement of the optimum on the evolution of the G-matrix and the response of the trait mean to selection. Journal of Evolutionary Biology. 25: 2210-31. PMID 22957960 DOI: 10.1111/J.1420-9101.2012.02598.X |
0.714 |
|
| 2012 |
Anderson JL, Rodríguez Marí A, Braasch I, Amores A, Hohenlohe P, Batzel P, Postlethwait JH. Multiple sex-associated regions and a putative sex chromosome in zebrafish revealed by RAD mapping and population genomics. Plos One. 7: e40701. PMID 22792396 DOI: 10.1371/Journal.Pone.0040701 |
0.38 |
|
| 2012 |
Funk WC, McKay JK, Hohenlohe PA, Allendorf FW. Harnessing genomics for delineating conservation units. Trends in Ecology & Evolution. 27: 489-96. PMID 22727017 DOI: 10.1016/J.Tree.2012.05.012 |
0.468 |
|
| 2012 |
Amish SJ, Hohenlohe PA, Painter S, Leary RF, Muhlfeld C, Allendorf FW, Luikart G. RAD sequencing yields a high success rate for westslope cutthroat and rainbow trout species-diagnostic SNP assays Molecular Ecology Resources. 12: 653-660. PMID 22672623 DOI: 10.1111/J.1755-0998.2012.03157.X |
0.387 |
|
| 2012 |
Hohenlohe PA, Catchen J, Cresko WA. Population genomic analysis of model and nonmodel organisms using sequenced RAD tags. Methods in Molecular Biology (Clifton, N.J.). 888: 235-60. PMID 22665285 DOI: 10.1007/978-1-61779-870-2_14 |
0.474 |
|
| 2012 |
Hohenlohe PA, Bassham S, Currey M, Cresko WA. Extensive linkage disequilibrium and parallel adaptive divergence across threespine stickleback genomes. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 367: 395-408. PMID 22201169 DOI: 10.1098/Rstb.2011.0245 |
0.48 |
|
| 2011 |
Catchen JM, Amores A, Hohenlohe P, Cresko W, Postlethwait JH. Stacks: building and genotyping Loci de novo from short-read sequences. G3 (Bethesda, Md.). 1: 171-82. PMID 22384329 DOI: 10.1534/G3.111.000240 |
0.405 |
|
| 2011 |
Etter PD, Bassham S, Hohenlohe PA, Johnson EA, Cresko WA. SNP discovery and genotyping for evolutionary genetics using RAD sequencing. Methods in Molecular Biology (Clifton, N.J.). 772: 157-78. PMID 22065437 DOI: 10.1007/978-1-61779-228-1_9 |
0.444 |
|
| 2011 |
Davey JW, Hohenlohe PA, Etter PD, Boone JQ, Catchen JM, Blaxter ML. Genome-wide genetic marker discovery and genotyping using next-generation sequencing. Nature Reviews. Genetics. 12: 499-510. PMID 21681211 DOI: 10.1038/Nrg3012 |
0.407 |
|
| 2011 |
Hohenlohe PA, Amish SJ, Catchen JM, Allendorf FW, Luikart G. Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout Molecular Ecology Resources. 11: 117-122. PMID 21429168 DOI: 10.1111/J.1755-0998.2010.02967.X |
0.378 |
|
| 2010 |
Hohenlohe PA, Phillips PC, Cresko WA. USING POPULATION GENOMICS TO DETECT SELECTION IN NATURAL POPULATIONS: KEY CONCEPTS AND METHODOLOGICAL CONSIDERATIONS. International Journal of Plant Sciences. 171: 1059-1071. PMID 21218185 DOI: 10.1086/656306 |
0.633 |
|
| 2010 |
Allendorf FW, Hohenlohe PA, Luikart G. Genomics and the future of conservation genetics Nature Reviews Genetics. 11: 697-709. PMID 20847747 DOI: 10.1038/Nrg2844 |
0.435 |
|
| 2010 |
Hohenlohe PA, Arnold SJ. Dimensionality of mate choice, sexual isolation, and speciation. Proceedings of the National Academy of Sciences of the United States of America. 107: 16583-8. PMID 20823250 DOI: 10.1073/Pnas.1003537107 |
0.617 |
|
| 2010 |
Emerson KJ, Merz CR, Catchen JM, Hohenlohe PA, Cresko WA, Bradshaw WE, Holzapfel CM. Resolving postglacial phylogeography using high-throughput sequencing Proceedings of the National Academy of Sciences of the United States of America. 107: 16196-16200. PMID 20798348 DOI: 10.1073/Pnas.1006538107 |
0.443 |
|
| 2010 |
Hohenlohe PA, Bassham S, Etter PD, Stiffler N, Johnson EA, Cresko WA. Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags. Plos Genetics. 6: e1000862. PMID 20195501 DOI: 10.1371/Journal.Pgen.1000862 |
0.471 |
|
| 2009 |
Uyeda JC, Arnold SJ, Hohenlohe PA, Mead LS. Drift promotes speciation by sexual selection. Evolution; International Journal of Organic Evolution. 63: 583-94. PMID 19087180 DOI: 10.1111/J.1558-5646.2008.00589.X |
0.647 |
|
| 2008 |
Arnold SJ, Bürger R, Hohenlohe PA, Ajie BC, Jones AG. Understanding the evolution and stability of the G-matrix. Evolution; International Journal of Organic Evolution. 62: 2451-61. PMID 18973631 DOI: 10.1111/J.1558-5646.2008.00472.X |
0.656 |
|
| 2008 |
Calcott B, Balcan D, Hohenlohe PA. A publish-subscribe model of genetic networks. Plos One. 3: e3245. PMID 18802467 DOI: 10.1371/Journal.Pone.0003245 |
0.302 |
|
| 2008 |
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0.55 |
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| 2008 |
Hohenlohe PA, Arnold SJ. MIPoD: a hypothesis-testing framework for microevolutionary inference from patterns of divergence. The American Naturalist. 171: 366-85. PMID 18194086 DOI: 10.1086/527498 |
0.63 |
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