Douglas R. Hoen, Ph.D. - Publications

Affiliations: 
2012 Biology McGill University, Montreal, QC, Canada 

15 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Yang W, Lee KW, Srivastava RM, Kuo F, Krishna C, Chowell D, Makarov V, Hoen D, Dalin MG, Wexler L, Ghossein R, Katabi N, Nadeem Z, Cohen MA, Tian SK, et al. Immunogenic neoantigens derived from gene fusions stimulate T cell responses. Nature Medicine. PMID 31011208 DOI: 10.1038/S41591-019-0434-2  0.364
2017 Joly-Lopez Z, Forczek E, Vello E, Hoen DR, Tomita A, Bureau TE. Abiotic Stress Phenotypes Are Associated with Conserved Genes Derived from Transposable Elements. Frontiers in Plant Science. 8: 2027. PMID 29250089 DOI: 10.3389/Fpls.2017.02027  0.71
2016 Joly-Lopez Z, Hoen DR, Blanchette M, Bureau TE. Phylogenetic and Genomic Analyses Resolve the Origin of Important Plant Genes Derived from Transposable Elements. Molecular Biology and Evolution. PMID 27189548 DOI: 10.1093/Molbev/Msw067  0.724
2015 Hoen DR, Hickey G, Bourque G, Casacuberta J, Cordaux R, Feschotte C, Fiston-Lavier AS, Hua-Van A, Hubley R, Kapusta A, Lerat E, Maumus F, Pollock DD, Quesneville H, Smit A, et al. A call for benchmarking transposable element annotation methods. Mobile Dna. 6: 13. PMID 26244060 DOI: 10.1186/S13100-015-0044-6  0.668
2015 Hoen DR, Bureau TE. Discovery of novel genes derived from transposable elements using integrative genomic analysis. Molecular Biology and Evolution. 32: 1487-506. PMID 25713212 DOI: 10.1093/Molbev/Msv042  0.75
2015 Hoen DR, Hickey G, Bourque G, Casacuberta J, Cordaux R, Feschotte C, Fiston-Lavier AS, Hua-Van A, Hubley R, Kapusta A, Lerat E, Maumus F, Pollock DD, Quesneville H, Smit A, et al. A call for benchmarking transposable element annotation methods Mobile Dna. 6. DOI: 10.1186/s13100-015-0044-6  0.618
2013 Haudry A, Platts AE, Vello E, Hoen DR, Leclercq M, Williamson RJ, Forczek E, Joly-Lopez Z, Steffen JG, Hazzouri KM, Dewar K, Stinchcombe JR, Schoen DJ, Wang X, Schmutz J, et al. An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nature Genetics. 45: 891-8. PMID 23817568 DOI: 10.1038/Ng.2684  0.739
2012 Joly-Lopez Z, Forczek E, Hoen DR, Juretic N, Bureau TE. A gene family derived from transposable elements during early angiosperm evolution has reproductive fitness benefits in Arabidopsis thaliana. Plos Genetics. 8: e1002931. PMID 22969437 DOI: 10.1371/Journal.Pgen.1002931  0.767
2012 Hoen DR, Bureau TE. Transposable element exaptation in plants Topics in Current Genetics. 24: 219-251. DOI: 10.1007/978-3-642-31842-9-12  0.644
2009 McNally KL, Childs KL, Bohnert R, Davidson RM, Zhao K, Ulat VJ, Zeller G, Clark RM, Hoen DR, Bureau TE, Stokowski R, Ballinger DG, Frazer KA, Cox DR, Padhukasahasram B, et al. Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proceedings of the National Academy of Sciences of the United States of America. 106: 12273-8. PMID 19597147 DOI: 10.1073/Pnas.0900992106  0.688
2008 Tanaka T, Antonio BA, Kikuchi S, Matsumoto T, Nagamura Y, Numa H, Sakai H, Wu J, Itoh T, Sasaki T, Aono R, Fujii Y, Habara T, Harada E, ... ... Hoen DR, et al. The Rice Annotation Project Database (RAP-DB): 2008 update. Nucleic Acids Research. 36: D1028-33. PMID 18089549 DOI: 10.1093/Nar/Gkm978  0.72
2007 Itoh T, Tanaka T, Barrero RA, Yamasaki C, Fujii Y, Hilton PB, Antonio BA, Aono H, Apweiler R, Bruskiewich R, Bureau T, Burr F, Costa de Oliveira A, Fuks G, ... ... Hoen D, et al. Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. Genome Research. 17: 175-83. PMID 17210932 DOI: 10.1101/Gr.5509507  0.741
2006 Hoen DR, Park KC, Elrouby N, Yu Z, Mohabir N, Cowan RK, Bureau TE. Transposon-mediated expansion and diversification of a family of ULP-like genes. Molecular Biology and Evolution. 23: 1254-68. PMID 16581939 DOI: 10.1093/Molbev/Msk015  0.747
2005 Juretic N, Hoen DR, Huynh ML, Harrison PM, Bureau TE. The evolutionary fate of MULE-mediated duplications of host gene fragments in rice. Genome Research. 15: 1292-7. PMID 16140995 DOI: 10.1101/Gr.4064205  0.729
2005 Cowan RK, Hoen DR, Schoen DJ, Bureau TE. MUSTANG is a novel family of domesticated transposase genes found in diverse angiosperms. Molecular Biology and Evolution. 22: 2084-9. PMID 15987878 DOI: 10.1093/Molbev/Msi202  0.746
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