Ripan Singh Malhi, Ph.D., Anthropology, University of California, Davis - Publications

Affiliations: 
Anthropology, Animal Biology, Institute for Genomic Biology, University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Area:
Native American mtDNA genome and ancient DNA diversity, Population Structure among Native North Americans, Stickleback Phylogeography, Rhesus macaque Evolutionary History
Website:
https://netfiles.uiuc.edu/malhi/www/MalhiLab/people.html

87 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Rider DF, Wolf ACE, Murray J, de Flamingh A, Dos Santos ALC, Lanoë F, Zedeño MN, DeGiorgio M, Lindo J, Malhi RS. Genomic analyses correspond with deep persistence of peoples of Blackfoot Confederacy from glacial times. Science Advances. 10: eadl6595. PMID 38569022 DOI: 10.1126/sciadv.adl6595  0.344
2023 de Flamingh A, Gnoske TP, Rivera-Colón AG, Simeonovski VA, Kerbis Peterhans JC, Yamaguchi N, Witt KE, Catchen J, Roca AL, Malhi RS. Genomic analysis supports Cape Lion population connectivity prior to colonial eradication and extinction. The Journal of Heredity. PMID 38150491 DOI: 10.1093/jhered/esad081  0.424
2023 Aqil A, Gill S, Gokcumen O, Malhi RS, Reese EA, Smith JL, Heaton TT, Lindqvist C. A paleogenome from a Holocene individual supports genetic continuity in Southeast Alaska. Iscience. 26: 106581. PMID 37138779 DOI: 10.1016/j.isci.2023.106581  0.432
2022 Severson AL, Byrd BF, Mallott EK, Owings AC, DeGiorgio M, de Flamingh A, Nijmeh C, Arellano MV, Leventhal A, Rosenberg NA, Malhi RS. Ancient and modern genomics of the Ohlone Indigenous population of California. Proceedings of the National Academy of Sciences of the United States of America. 119: e2111533119. PMID 35312358 DOI: 10.1073/pnas.2111533119  0.764
2021 Malhi RS. Contributions to Anti-Racist Science: Introduction to Race, Racism, and the Genetic Structure of Human Populations Special Issue. Human Biology. 92: 133-134. PMID 34057326 DOI: 10.13110/humanbiology.92.3.01  0.32
2021 Capodiferro MR, Aram B, Raveane A, Rambaldi Migliore N, Colombo G, Ongaro L, Rivera J, Mendizábal T, Hernández-Mora I, Tribaldos M, Perego UA, Li H, Scheib CL, Modi A, Gòmez-Carballa A, ... ... Malhi RS, et al. Archaeogenomic distinctiveness of the Isthmo-Colombian area. Cell. PMID 33761327 DOI: 10.1016/j.cell.2021.02.040  0.396
2020 Buonasera T, Eerkens J, de Flamingh A, Engbring L, Yip J, Li H, Haas R, DiGiuseppe D, Grant D, Salemi M, Nijmeh C, Arellano M, Leventhal A, Phinney B, Byrd BF, ... Malhi RS, et al. A comparison of proteomic, genomic, and osteological methods of archaeological sex estimation. Scientific Reports. 10: 11897. PMID 32681049 DOI: 10.1038/S41598-020-68550-W  0.324
2020 Yao L, Witt K, Li H, Rice J, Salinas NR, Martin RD, Huerta-Sánchez E, Malhi RS. Population genetics of wild Macaca fascicularis with low-coverage shotgun sequencing of museum specimens. American Journal of Physical Anthropology. PMID 32643146 DOI: 10.1002/Ajpa.24099  0.446
2020 Hudson M, Garrison NA, Sterling R, Caron NR, Fox K, Yracheta J, Anderson J, Wilcox P, Arbour L, Brown A, Taualii M, Kukutai T, Haring R, Te Aika B, Baynam GS, ... ... Malhi RS, et al. Rights, interests and expectations: Indigenous perspectives on unrestricted access to genomic data. Nature Reviews. Genetics. PMID 32251390 DOI: 10.1038/S41576-020-0228-X  0.409
2020 de Flamingh A, Coutu A, Roca AL, Malhi RS. Accurate Sex Identification of Ancient Elephant and Other Animal Remains Using Low-Coverage DNA Shotgun Sequencing Data. G3 (Bethesda, Md.). PMID 32107273 DOI: 10.1534/G3.119.400833  0.345
2019 Owings AC, Fernandes SB, Olatoye MO, Fogleman AJ, Zahnd WE, Jenkins WD, Malhi RS, Lipka AE. Population Structure Analyses Provide Insight into the Source Populations Underlying Rural Isolated Communities in Illinois. Human Biology. 91: 31-47. PMID 32073243 DOI: 10.13110/Humanbiology.91.1.05  0.768
2019 Loog L, Thalmann O, Sinding MS, Schuenemann VJ, Perri A, Germonpré M, Bocherens H, Witt KE, Samaniego Castruita JA, Velasco MS, Lundstrøm IKC, Wales N, Sonet G, Frantz L, Schroeder H, ... ... Malhi RS, et al. Ancient DNA suggests modern wolves trace their origin to a late Pleistocene expansion from Beringia. Molecular Ecology. PMID 31840921 DOI: 10.1111/Mec.15329  0.511
2019 Zhao K, Ishida Y, Green CE, Davidson AG, Sitam FAT, Donnelly CL, De Flamingh A, Perrin-Stowe TIN, Bourgeois S, Brandt AL, Mundis SJ, Van Aarde RJ, Greenberg JA, Malhi RS, Georgiadis NJ, et al. Loxodonta Localizer: A Software Tool for Inferring the Provenance of African Elephants and Their Ivory Using Mitochondrial DNA. The Journal of Heredity. PMID 31674643 DOI: 10.1093/Jhered/Esz058  0.421
2019 Sikora M, Pitulko VV, Sousa VC, Allentoft ME, Vinner L, Rasmussen S, Margaryan A, de Barros Damgaard P, de la Fuente C, Renaud G, Yang MA, Fu Q, Dupanloup I, Giampoudakis K, Nogués-Bravo D, ... ... Malhi RS, et al. The population history of northeastern Siberia since the Pleistocene. Nature. PMID 31168093 DOI: 10.1038/S41586-019-1279-Z  0.495
2019 Fogleman AJ, Zahnd WE, Lipka AE, Malhi RS, Ganai S, Delfino KR, Jenkins WD. Knowledge, attitudes, and perceived barriers towards genetic testing across three rural Illinois communities. Journal of Community Genetics. PMID 30673953 DOI: 10.1007/S12687-019-00407-W  0.419
2019 Schablitsky JM, Witt KE, Madrigal JR, Ellegaard MR, Malhi RS, Schroeder H. Ancient DNA analysis of a nineteenth century tobacco pipe from a Maryland slave quarter Journal of Archaeological Science. 105: 11-18. DOI: 10.1016/J.Jas.2019.02.006  0.417
2018 Moreno-Mayar JV, Vinner L, de Barros Damgaard P, de la Fuente C, Chan J, Spence JP, Allentoft ME, Vimala T, Racimo F, Pinotti T, Rasmussen S, Margaryan A, Iraeta Orbegozo M, Mylopotamitaki D, Wooller M, ... ... Malhi RS, et al. Early human dispersals within the Americas. Science (New York, N.Y.). PMID 30409807 DOI: 10.1126/Science.Aav2621  0.485
2018 Potter BA, Baichtal JF, Beaudoin AB, Fehren-Schmitz L, Haynes CV, Holliday VT, Holmes CE, Ives JW, Kelly RL, Llamas B, Malhi RS, Miller DS, Reich D, Reuther JD, Schiffels S, et al. Current evidence allows multiple models for the peopling of the Americas. Science Advances. 4: eaat5473. PMID 30101195 DOI: 10.1126/Sciadv.Aat5473  0.38
2018 Ní Leathlobhair M, Perri AR, Irving-Pease EK, Witt KE, Linderholm A, Haile J, Lebrasseur O, Ameen C, Blick J, Boyko AR, Brace S, Cortes YN, Crockford SJ, Devault A, Dimopoulos EA, ... ... Malhi RS, et al. The evolutionary history of dogs in the Americas. Science (New York, N.Y.). 361: 81-85. PMID 29976825 DOI: 10.1126/Science.Aao4776  0.417
2018 Mallott EK, Garber PA, Malhi RS. trnL outperforms rbcL as a DNA metabarcoding marker when compared with the observed plant component of the diet of wild white-faced capuchins (Cebus capucinus, Primates). Plos One. 13: e0199556. PMID 29944686 DOI: 10.1371/Journal.Pone.0199556  0.314
2018 Scheib CL, Li H, Desai T, Link V, Kendall C, Dewar G, Griffith PW, Mörseburg A, Johnson JR, Potter A, Kerr SL, Endicott P, Lindo J, Haber M, Xue Y, ... ... Malhi RS, et al. Ancient human parallel lineages within North America contributed to a coastal expansion. Science (New York, N.Y.). 360: 1024-1027. PMID 29853687 DOI: 10.1126/Science.Aar6851  0.507
2018 Lindo J, Rogers M, Mallott EK, Petzelt B, Mitchell J, Archer D, Cybulski JS, Malhi RS, DeGiorgio M. Patterns of Genetic Coding Variation in a Native American Population before and after European Contact. American Journal of Human Genetics. PMID 29706345 DOI: 10.1016/J.Ajhg.2018.03.008  0.531
2018 Bardill J, Bader AC, Garrison NA, Bolnick DA, Raff JA, Walker A, Malhi RS. Advancing the ethics of paleogenomics. Science (New York, N.Y.). 360: 384-385. PMID 29700256 DOI: 10.1126/Science.Aaq1131  0.332
2018 Brandt JR, Van Coeverden de Groot PJ, Witt KE, Engelbrektsson PK, Helgen KM, Malhi RS, Ryder OA, Roca AL. Genetic structure and diversity among historic and modern populations of the Sumatran rhinoceros (Dicerorhinus sumatrensis). The Journal of Heredity. PMID 29684146 DOI: 10.1093/Jhered/Esy019  0.502
2018 Antón SC, Malhi RS, Fuentes A. Race and diversity in U.S. Biological Anthropology: A decade of AAPA initiatives. American Journal of Physical Anthropology. 165: 158-180. PMID 29380881 DOI: 10.1002/Ajpa.23382  0.362
2018 Moreno-Mayar JV, Potter BA, Vinner L, Steinrücken M, Rasmussen S, Terhorst J, Kamm JA, Albrechtsen A, Malaspinas AS, Sikora M, Reuther JD, Irish JD, Malhi RS, Orlando L, Song YS, et al. Terminal Pleistocene Alaskan genome reveals first founding population of Native Americans. Nature. 553: 203-207. PMID 29323294 DOI: 10.1038/Nature25173  0.467
2018 de Flamingh A, Mallott EK, Roca AL, Boraas AS, Malhi RS. Species identification and mitochondrial genomes of ancient fish bones from the Riverine Kachemak tradition of the Kenai Peninsula, Alaska Mitochondrial Dna Part B. 3: 409-411. DOI: 10.1080/23802359.2018.1456371  0.316
2017 Claw KG, Lippert D, Bardill J, Cordova A, Fox K, Yracheta JM, Bader AC, Bolnick DA, Malhi RS, TallBear K, Garrison NA. Chaco Canyon Dig Unearths Ethical Concerns. Human Biology. 89: 177-180. PMID 29745246 DOI: 10.13110/Humanbiology.89.3.01  0.344
2017 Molto JE, Loreille O, Mallott EK, Malhi RS, Fast S, Daniels-Higginbotham J, Marshall C, Parr R. Complete Mitochondrial Genome Sequencing of a Burial from a Romano-Christian Cemetery in the Dakhleh Oasis, Egypt: Preliminary Indications. Genes. 8. PMID 28984839 DOI: 10.3390/Genes8100262  0.418
2017 Yao L, Li H, Martin RD, Moreau CS, Malhi RS. Tracing the phylogeographic history of Southeast Asian long-tailed macaques through mitogenomes of museum specimens. Molecular Phylogenetics and Evolution. PMID 28863929 DOI: 10.1016/J.Ympev.2017.08.006  0.426
2017 Dean C, Fogleman AJ, Zahnd WE, Lipka AE, Malhi RS, Delfino KR, Jenkins WD. Engaging rural communities in genetic research: challenges and opportunities. Journal of Community Genetics. PMID 28477297 DOI: 10.1007/S12687-017-0304-X  0.346
2017 Lindo J, Achilli A, Perego UA, Archer D, Valdiosera C, Petzelt B, Mitchell J, Worl R, Dixon EJ, Fifield TE, Rasmussen M, Willerslev E, Cybulski JS, Kemp BM, DeGiorgio M, ... Malhi RS, et al. Ancient individuals from the North American Northwest Coast reveal 10,000 years of regional genetic continuity. Proceedings of the National Academy of Sciences of the United States of America. PMID 28377518 DOI: 10.1073/Pnas.1620410114  0.522
2016 Hughes CE, Rogers MP, Owings AC, Petzelt B, Mitchell J, Harry H, Williams T, Goldberg D, Labuda D, Smith DG, Cybulski JS, Malhi RS. Genetic Structure of First Nation Communities in the Pacific Northwest. Human Biology. 88: 251-263. PMID 28826319 DOI: 10.13110/Humanbiology.88.4.0251  0.774
2016 Lindo J, Huerta-Sánchez E, Nakagome S, Rasmussen M, Petzelt B, Mitchell J, Cybulski JS, Willerslev E, DeGiorgio M, Malhi RS. A time transect of exomes from a Native American population before and after European contact. Nature Communications. 7: 13175. PMID 27845766 DOI: 10.1038/Ncomms13175  0.451
2016 Jenkins WD, Lipka AE, Fogleman AJ, Delfino KR, Malhi RS, Hendricks B. Variance in disease risk: rural populations and genetic diversity. Genome / National Research Council Canada = Genome / Conseil National De Recherches Canada. 1-7. PMID 27334395 DOI: 10.1139/Gen-2016-0077  0.405
2015 Malhi RS, Bader A. ENGAGING NATIVE AMERICANS IN GENOMICS RESEARCH. American Anthropologist. 117: 743-744. PMID 27799658 DOI: 10.1111/Aman.12369  0.466
2015 Bader AC, Malhi RS. Case Study on Ancestry Estimation in an Alaskan Native Family: Identity and Safeguards Against Reductionism. Human Biology. 87: 338-351. PMID 27737591 DOI: 10.13110/Humanbiology.87.4.0338  0.416
2015 Sans M, Figueiro G, Hughes CE, Lindo J, Hidalgo PC, Malhi RS. A South American Prehistoric Mitogenome: Context, Continuity, and the Origin of Haplogroup C1d. Plos One. 10: e0141808. PMID 26509686 DOI: 10.1371/Journal.Pone.0141808  0.366
2015 Dong Y, Li C, Luan F, Li Z, Li H, Cui Y, Zhou H, Malhi RS. Low Mitochondrial DNA Diversity in an Ancient Population from China: Insight into Social Organization at the Fujia Site. Human Biology. 87: 71-84. PMID 26416323 DOI: 10.13110/Humanbiology.87.1.0071  0.399
2015 Eerkens JW, Carlson T, Malhi RS, Blake J, Bartelink EJ, Barfod GH, Estes A, Garibay R, Glessner J, Greenwald AM, Lentz K, Li H, Marshall CK. Isotopic and genetic analyses of a mass grave in central California: Implications for precontact hunter-gatherer warfare. American Journal of Physical Anthropology. PMID 26331533 DOI: 10.1002/Ajpa.22843  0.319
2015 Raghavan M, Steinrücken M, Harris K, Schiffels S, Rasmussen S, DeGiorgio M, Albrechtsen A, Valdiosera C, Ávila-Arcos MC, Malaspinas AS, Eriksson A, Moltke I, Metspalu M, Homburger JR, Wall J, ... ... Malhi RS, et al. Genomic evidence for the Pleistocene and recent population history of Native Americans. Science (New York, N.Y.). PMID 26198033 DOI: 10.1126/Science.Aab3884  0.495
2015 Rasmussen M, Sikora M, Albrechtsen A, Korneliussen TS, Moreno-Mayar JV, Poznik GD, Zollikofer CP, Ponce de León MS, Allentoft ME, Moltke I, Jónsson H, Valdiosera C, Malhi RS, Orlando L, Bustamante CD, et al. The ancestry and affiliations of Kennewick Man. Nature. PMID 26087396 DOI: 10.1038/Nature14625  0.476
2015 Kemp BM, Lindo J, Bolnick DA, Malhi RS, Chatters JC. Anthropology. Response to Comment on "Late Pleistocene human skeleton and mtDNA link Paleoamericans and modern Native Americans". Science (New York, N.Y.). 347: 835. PMID 25700511 DOI: 10.1126/Science.1261188  0.342
2015 Witt KE, Judd K, Kitchen A, Grier C, Kohler TA, Ortman SG, Kemp BM, Malhi RS. DNA analysis of ancient dogs of the Americas: identifying possible founding haplotypes and reconstructing population histories. Journal of Human Evolution. 79: 105-18. PMID 25532803 DOI: 10.1016/J.Jhevol.2014.10.012  0.501
2015 Kistler L, Ratan A, Godfrey LR, Crowley BE, Hughes CE, Lei R, Cui Y, Wood ML, Muldoon KM, Andriamialison H, McGraw JJ, Tomsho LP, Schuster SC, Miller W, Louis EE, ... ... Malhi RS, et al. Comparative and population mitogenomic analyses of Madagascar's extinct, giant 'subfossil' lemurs. Journal of Human Evolution. 79: 45-54. PMID 25523037 DOI: 10.1016/J.Jhevol.2014.06.016  0.469
2015 Mallott EK, Malhi RS, Garber PA. High-throughput sequencing of fecal DNA to identify insects consumed by wild Weddell's saddleback tamarins (Saguinus weddelli, Cebidae, Primates) in Bolivia. American Journal of Physical Anthropology. 156: 474-81. PMID 25369770 DOI: 10.1002/Ajpa.22654  0.358
2015 Kitchen A, Non AL, Gravlee CC, Mulligan CJ, Warinner C, Lewis CM, Bankoff RJ, Randrianatoandro HDD, Perry GH, Malhi RS, Bader AC, Raff J. Anthropological Genetics American Anthropologist. DOI: 10.1111/Aman.12364  0.397
2014 Malhi RS, Kemp BM. Providing a venue for influential research in anthropological genomics. Introduction. Human Biology. 86: 5-6. PMID 25401982 DOI: 10.13110/Humanbiology.86.1.0005  0.323
2014 Shattuck MR, Satkoski-Trask J, Deinard A, Tito RY, Smith DG, Melnick DJ, Malhi RS. Patterns of genetic variation and the role of selection in HTR1A and HTR1B in macaques (Macaca). Bmc Genetics. 15: 116. PMID 25376878 DOI: 10.1186/S12863-014-0116-5  0.635
2014 Verdu P, Pemberton TJ, Laurent R, Kemp BM, Gonzalez-Oliver A, Gorodezky C, Hughes CE, Shattuck MR, Petzelt B, Mitchell J, Harry H, William T, Worl R, Cybulski JS, Rosenberg NA, ... Malhi RS, et al. Patterns of admixture and population structure in native populations of Northwest North America. Plos Genetics. 10: e1004530. PMID 25122539 DOI: 10.1371/Journal.Pgen.1004530  0.698
2014 Kennett DJ, Asmerom Y, Kemp BM, Polyak V, Bolnick DA, Malhi RS, Culleton BJ. Early Americans: misstated results. Science (New York, N.Y.). 345: 390. PMID 25061196 DOI: 10.1126/Science.345.6195.390-A  0.377
2014 Chatters JC, Kennett DJ, Asmerom Y, Kemp BM, Polyak V, Blank AN, Beddows PA, Reinhardt E, Arroyo-Cabrales J, Bolnick DA, Malhi RS, Culleton BJ, Erreguerena PL, Rissolo D, Morell-Hart S, et al. Late Pleistocene human skeleton and mtDNA link Paleoamericans and modern Native Americans. Science (New York, N.Y.). 344: 750-4. PMID 24833392 DOI: 10.1126/Science.1252619  0.408
2014 Rasmussen M, Anzick SL, Waters MR, Skoglund P, DeGiorgio M, Stafford TW, Rasmussen S, Moltke I, Albrechtsen A, Doyle SM, Poznik GD, Gudmundsdottir V, Yadav R, Malaspinas AS, White SS, ... ... Malhi RS, et al. The genome of a Late Pleistocene human from a Clovis burial site in western Montana. Nature. 506: 225-9. PMID 24522598 DOI: 10.1038/Nature13025  0.477
2014 Shattuck MR, Satkoski-Trask J, Deinard A, Tito RY, Smith DG, Malhi RS. The evolutionary history of SLC6A4 and the role of plasticity in Macaca. American Journal of Physical Anthropology. 153: 605-16. PMID 24375078 DOI: 10.1002/Ajpa.22460  0.626
2013 Achilli A, Perego UA, Lancioni H, Olivieri A, Gandini F, Hooshiar Kashani B, Battaglia V, Grugni V, Angerhofer N, Rogers MP, Herrera RJ, Woodward SR, Labuda D, Smith DG, Cybulski JS, ... ... Malhi RS, et al. Reconciling migration models to the Americas with the variation of North American native mitogenomes. Proceedings of the National Academy of Sciences of the United States of America. 110: 14308-13. PMID 23940335 DOI: 10.1073/Pnas.1306290110  0.456
2013 Cui Y, Lindo J, Hughes CE, Johnson JW, Hernandez AG, Kemp BM, Ma J, Cunningham R, Petzelt B, Mitchell J, Archer D, Cybulski JS, Malhi RS. Ancient DNA analysis of mid-holocene individuals from the Northwest Coast of North America reveals different evolutionary paths for mitogenomes. Plos One. 8: e66948. PMID 23843972 DOI: 10.1371/Journal.Pone.0066948  0.484
2012 Yan C, Shattuck MR, Thimmapuram J, Vullaganti D, Malhi R. Developing SNPs and STR DNA markers for snub-nosed monkeys (Rhinopithecus roxellana) using next-generation sequencing technology Conservation Genetics Resources. 4: 451-453. DOI: 10.1007/S12686-011-9572-7  0.629
2011 Trask JS, Garnica WT, Kanthaswamy S, Malhi RS, Smith DG. 4040 SNPs for genomic analysis in the rhesus macaque (Macaca mulatta). Genomics. 98: 352-8. PMID 21907785 DOI: 10.1016/J.Ygeno.2011.08.004  0.454
2011 Trask JS, Garnica WT, Malhi RS, Kanthaswamy S, Smith DG. High-throughput single-nucleotide polymorphism discovery and the search for candidate genes for long-term SIVmac nonprogression in Chinese rhesus macaques (Macaca mulatta). Journal of Medical Primatology. 40: 224-32. PMID 21781130 DOI: 10.1111/J.1600-0684.2011.00486.X  0.393
2011 Malhi RS, Trask JS, Shattuck M, Johnson J, Chakraborty D, Kanthaswamy S, Ramakrishnan U, Smith DG. Genotyping single nucleotide polymorphisms (SNPs) across species in Old World Monkeys. American Journal of Primatology. 73: 1031-40. PMID 21630301 DOI: 10.1002/Ajp.20969  0.705
2011 Trask JA, Malhi RS, Kanthaswamy S, Johnson J, Garnica WT, Malladi VS, Smith DG. The effect of SNP discovery method and sample size on estimation of population genetic data for Chinese and Indian rhesus macaques (Macaca mulatta). Primates; Journal of Primatology. 52: 129-38. PMID 21207104 DOI: 10.1007/S10329-010-0232-4  0.505
2011 Wilson BJ, Crockford SJ, Johnson JW, Malhi RS, Kemp BM. Genetic and archaeological evidence for a former breeding population of Aleutian cackling goose (Branta hutchinsii leucopareia) on Adak Island, central Aleutians, Alaska Canadian Journal of Zoology. 89: 732-743. DOI: 10.1139/z11-027  0.398
2011 Wilson BJ, Crockford SJ, Johnson JW, Malhi RS, Kemp BM. Genetic and archaeological evidence for a former breeding population of Aleutian cackling goose (Branta hutchinsii leucopareia) on Adak Island, central Aleutians, Alaska Canadian Journal of Zoology. 89: 732-743. DOI: 10.1139/Z11-027  0.424
2010 Kemp BM, González-Oliver A, Malhi RS, Monroe C, Schroeder KB, McDonough J, Rhett G, Resendéz A, Peñaloza-Espinosa RI, Buentello-Malo L, Gorodesky C, Smith DG. Evaluating the Farming/Language Dispersal Hypothesis with genetic variation exhibited by populations in the Southwest and Mesoamerica. Proceedings of the National Academy of Sciences of the United States of America. 107: 6759-64. PMID 20351276 DOI: 10.1073/Pnas.0905753107  0.44
2010 Malhi RS, Cybulski JS, Tito RY, Johnson J, Harry H, Dan C. Brief communication: mitochondrial haplotype C4c confirmed as a founding genome in the Americas. American Journal of Physical Anthropology. 141: 494-7. PMID 20027611 DOI: 10.1002/Ajpa.21238  0.43
2010 Luetkemeier ES, Sodhi M, Schook LB, Malhi RS. Multiple Asian pig origins revealed through genomic analyses. Molecular Phylogenetics and Evolution. 54: 680-6. PMID 19900568 DOI: 10.1016/J.Ympev.2009.11.004  0.515
2009 Malhi RS, Schroeder KB, Kemp BM. Uses and limitations of genetic data relating to Athapaskan migrations: a reply to Seymour. American Journal of Physical Anthropology. 140: 203-4. PMID 19591212 DOI: 10.1002/Ajpa.21130  0.376
2009 Schroeder KB, Jakobsson M, Crawford MH, Schurr TG, Boca SM, Conrad DF, Tito RY, Osipova LP, Tarskaia LA, Zhadanov SI, Wall JD, Pritchard JK, Malhi RS, Smith DG, Rosenberg NA. Haplotypic background of a private allele at high frequency in the Americas. Molecular Biology and Evolution. 26: 995-1016. PMID 19221006 DOI: 10.1093/Molbev/Msp024  0.455
2009 Luetkemeier ES, Malhi RS, Beever JE, Schook LB. Diversification of porcine MHC class II genes: evidence for selective advantage. Immunogenetics. 61: 119-29. PMID 19142631 DOI: 10.1007/S00251-008-0348-5  0.426
2009 Malhi R. Implications of the Genographic Project for Molecular Anthropologists International Journal of Cultural Property. 16: 193-194. DOI: 10.1017/S0940739109090122  0.335
2008 Malhi RS, Gonzalez-Oliver A, Schroeder KB, Kemp BM, Greenberg JA, Dobrowski SZ, Smith DG, Resendez A, Karafet T, Hammer M, Zegura S, Brovko T. Distribution of Y chromosomes among native North Americans: a study of Athapaskan population history. American Journal of Physical Anthropology. 137: 412-24. PMID 18618732 DOI: 10.1002/Ajpa.20883  0.396
2008 Satkoski JA, Malhi RS, Kanthaswamy S, Tito RY, Malladi VS, Smith DG. Pyrosequencing as a method for SNP identification in the rhesus macaque (Macaca mulatta) Bmc Genomics. 9. PMID 18510772 DOI: 10.1186/1471-2164-9-256  0.461
2007 Tamm E, Kivisild T, Reidla M, Metspalu M, Smith DG, Mulligan CJ, Bravi CM, Rickards O, Martinez-Labarga C, Khusnutdinova EK, Fedorova SA, Golubenko MV, Stepanov VA, Gubina MA, Zhadanov SI, ... ... Malhi RS, et al. Beringian standstill and spread of Native American founders. Plos One. 2: e829. PMID 17786201 DOI: 10.1371/Journal.Pone.0000829  0.479
2007 Malhi RS, Sickler B, Lin D, Satkoski J, Tito RY, George D, Kanthaswamy S, Smith DG. MamuSNP: a resource for Rhesus Macaque (Macaca mulatta) genomics. Plos One. 2: e438. PMID 17487284 DOI: 10.1371/Journal.Pone.0000438  0.404
2007 Kemp BM, Malhi RS, McDonough J, Bolnick DA, Eshleman JA, Rickards O, Martinez-Labarga C, Johnson JR, Lorenz JG, Dixon EJ, Fifield TE, Heaton TH, Worl R, Smith DG. Genetic analysis of early holocene skeletal remains from Alaska and its implications for the settlement of the Americas. American Journal of Physical Anthropology. 132: 605-21. PMID 17243155 DOI: 10.1002/Ajpa.20543  0.443
2007 Malhi RS, Kemp BM, Eshleman JA, Cybulski J, Smith DG, Cousins S, Harry H. Mitochondrial haplogroup M discovered in prehistoric North Americans Journal of Archaeological Science. 34: 642-648. DOI: 10.1016/J.Jas.2006.07.004  0.508
2006 Malhi RS, Rhett G, Bell AM. Mitochondrial DNA evidence of an early Holocene population expansion of threespine sticklebacks from Scotland. Molecular Phylogenetics and Evolution. 40: 148-54. PMID 16617024 DOI: 10.1016/J.Ympev.2006.02.019  0.503
2006 Schroeder KB, Malhi RS, Smith DG. Opinion: Demystifying native American genetic opposition to research Evolutionary Anthropology. 15: 88-92. DOI: 10.1002/Evan.20100  0.4
2004 Eshleman JA, Malhi RS, Johnson JR, Kaestle FA, Lorenz J, Smith DG. Mitochondrial DNA and prehistoric settlements: native migrations on the western edge of North America. Human Biology. 76: 55-75. PMID 15222680 DOI: 10.1353/Hub.2004.0019  0.51
2004 Malhi RS, Breece KE, Shook BA, Kaestle FA, Chatters JC, Hackenberger S, Smith DG. Patterns of mtDNA diversity in northwestern North America. Human Biology. 76: 33-54. PMID 15222679 DOI: 10.1353/Hub.2004.0023  0.459
2003 Malhi RS, Mortensen HM, Eshleman JA, Kemp BM, Lorenz JG, Kaestle FA, Johnson JR, Gorodezky C, Smith DG. Native American mtDNA prehistory in the American Southwest. American Journal of Physical Anthropology. 120: 108-24. PMID 12541329 DOI: 10.1002/Ajpa.10138  0.514
2003 Eshleman JA, Malhi RS, Smith DG. Mitochondrial DNA Studies of Native Americans: Conceptions and Misconceptions of the Population Prehistory of the Americas Evolutionary Anthropology. 12: 7-18. DOI: 10.1002/Evan.10048  0.491
2002 Malhi RS, Smith DG. Brief communication: Haplogroup X confirmed in prehistoric North America. American Journal of Physical Anthropology. 119: 84-6. PMID 12209576 DOI: 10.1002/Ajpa.10106  0.311
2002 Malhi RS, Eshleman JA, Greenberg JA, Weiss DA, Schultz Shook BA, Kaestle FA, Lorenz JG, Kemp BM, Johnson JR, Smith DG. The structure of diversity within New World mitochondrial DNA haplogroups: implications for the prehistory of North America. American Journal of Human Genetics. 70: 905-19. PMID 11845406 DOI: 10.1086/339690  0.492
2001 Malhi RS, Schultz BA, Smith DG. Distribution of mitochondrial DNA lineages among Native American tribes of Northeastern North America. Human Biology. 73: 17-55. PMID 11332644 DOI: 10.1353/Hub.2001.0008  0.438
2000 Smith DG, Lorenz J, Rolfs BK, Bettinger RL, Green B, Eshleman J, Schultz B, Malhi R. Implications of the distribution of Albumin Naskapi and Albumin Mexico for new world prehistory American Journal of Physical Anthropology. 111: 557-572. PMID 10727973 DOI: 10.1002/(Sici)1096-8644(200004)111:4<557::Aid-Ajpa10>3.0.Co;2-B  0.317
1999 Smith DG, Malhi RS, Eshleman J, Lorenz JG, Kaestle FA. Distribution of mtDNA haplogroup X among Native North Americans. American Journal of Physical Anthropology. 110: 271-84. PMID 10516561 DOI: 10.1002/(Sici)1096-8644(199911)110:3<271::Aid-Ajpa2>3.0.Co;2-C  0.316
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