Bret A. Payseur - Publications

Affiliations: 
University of Wisconsin, Madison, Madison, WI 
Area:
Genetics, Biostatistics Biology

88 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2025 Payseur BA, Jing P, Howell EK, Frayer ME, Jones EP, Magnussen E, Jensen JK, Chan YF, Searle JB. Population Genomics of Giant Mice from the Faroe Islands: Hybridization, Colonization, and a Novel Challenge to Identifying Genomic Targets of Selection. Biorxiv : the Preprint Server For Biology. PMID 39896584 DOI: 10.1101/2025.01.20.633586  0.419
2024 Haasl RJ, Payseur BA. Fitness landscapes of human microsatellites. Plos Genetics. 20: e1011524. PMID 39775235 DOI: 10.1371/journal.pgen.1011524  0.802
2024 Payseur BA. Genetics of Recombination Rate Variation Within and Between Species. Journal of Evolutionary Biology. PMID 39680417 DOI: 10.1093/jeb/voae158  0.51
2024 Morgan AP, Payseur BA. Genetic background affects the strength of crossover interference in house mice. Genetics. PMID 39241112 DOI: 10.1093/genetics/iyae146  0.385
2024 Morgan AP, Payseur BA. Genetic background affects the strength of crossover interference in house mice. Biorxiv : the Preprint Server For Biology. PMID 38854148 DOI: 10.1101/2024.05.28.596233  0.383
2024 Frayer ME, Payseur BA. Do Genetic Loci that Cause Reproductive Isolation in the Lab Inhibit Gene Flow in Nature? Evolution; International Journal of Organic Evolution. PMID 38490748 DOI: 10.1093/evolut/qpae044  0.419
2023 Stratton JA, Nolte MJ, Payseur BA. Genetics of behavioural evolution in giant mice from Gough Island. Proceedings. Biological Sciences. 290: 20222603. PMID 37161324 DOI: 10.1098/rspb.2022.2603  0.421
2022 Booker TR, Payseur BA, Tigano A. Background selection under evolving recombination rates. Proceedings. Biological Sciences. 289: 20220782. PMID 35730151 DOI: 10.1098/rspb.2022.0782  0.483
2022 Johri P, Aquadro CF, Beaumont M, Charlesworth B, Excoffier L, Eyre-Walker A, Keightley PD, Lynch M, McVean G, Payseur BA, Pfeifer SP, Stephan W, Jensen JD. Recommendations for improving statistical inference in population genomics. Plos Biology. 20: e3001669. PMID 35639797 DOI: 10.1371/journal.pbio.3001669  0.648
2022 Parmenter MD, Nelson JP, Gray MM, Weigel S, Vinyard CJ, Payseur BA. A Complex Genetic Architecture Underlies Mandibular Evolution in Big Mice from Gough Island. Genetics. PMID 35137059 DOI: 10.1093/genetics/iyac023  0.387
2021 Peterson AL, Payseur BA. Higher Intercellular Variation in Genome-Wide Recombination Rate in Female Mice. Cytogenetic and Genome Research. 1-7. PMID 34510033 DOI: 10.1159/000516998  0.382
2021 Frayer ME, Payseur BA. Demographic history shapes genomic ancestry in hybrid zones. Ecology and Evolution. 11: 10290-10302. PMID 34367575 DOI: 10.1002/ece3.7833  0.406
2021 Blanckaert A, Payseur BA. Finding hybrid incompatibilities using genome sequences from hybrid populations. Molecular Biology and Evolution. PMID 34097068 DOI: 10.1093/molbev/msab168  0.486
2021 Peterson AL, Payseur BA. Sex-specific variation in the genome-wide recombination rate. Genetics. 217: 1-11. PMID 33683358 DOI: 10.1093/genetics/iyaa019  0.365
2020 Payseur BA, Jing P. Genomic Targets of Positive Selection in Giant Mice from Gough Island. Molecular Biology and Evolution. PMID 33022034 DOI: 10.1093/molbev/msaa255  0.449
2020 Nolte MJ, Jing P, Dewey CN, Payseur BA. Giant Island Mice Exhibit Widespread Gene Expression Changes in Key Metabolic Organs. Genome Biology and Evolution. PMID 32531054 DOI: 10.1093/Gbe/Evaa118  0.4
2020 Kartje ME, Jing P, Payseur BA. Weak Correlation between Nucleotide Variation and Recombination Rate across the House Mouse Genome. Genome Biology and Evolution. PMID 32108880 DOI: 10.1093/Gbe/Evaa045  0.571
2020 Morgan K, Harr B, White MA, Payseur BA, Turner LM. Disrupted gene networks in subfertile hybrid house mice. Molecular Biology and Evolution. PMID 32076722 DOI: 10.1093/Molbev/Msaa002  0.392
2019 Dapper AL, Payseur BA. Molecular evolution of the meiotic recombination pathway in mammals. Evolution; International Journal of Organic Evolution. PMID 31579931 DOI: 10.1111/Evo.13850  0.797
2019 Wang RJ, Dumont BL, Jing P, Payseur BA. A first genetic portrait of synaptonemal complex variation. Plos Genetics. 15: e1008337. PMID 31449519 DOI: 10.1371/Journal.Pgen.1008337  0.777
2019 Otto SP, Payseur BA. Crossover Interference: Shedding Light on the Evolution of Recombination. Annual Review of Genetics. PMID 31430178 DOI: 10.1146/Annurev-Genet-040119-093957  0.415
2019 Peterson AL, Miller ND, Payseur BA. Conservation of the genome-wide recombination rate in white-footed mice. Heredity. PMID 31366913 DOI: 10.1038/S41437-019-0252-9  0.56
2018 Parmenter MD, Nelson JP, Weigel SE, Gray MM, Payseur BA, Vinyard CJ. Masticatory Apparatus Performance and Functional Morphology in the Extremely Large Mice from Gough Island. Anatomical Record (Hoboken, N.J. : 2007). PMID 30548803 DOI: 10.1002/Ar.24053  0.301
2018 Jensen JD, Payseur BA, Stephan W, Aquadro CF, Lynch M, Charlesworth D, Charlesworth B. The importance of the neutral theory in 1968 and 50 years on: a response to Kern & Hahn 2018. Evolution; International Journal of Organic Evolution. PMID 30460993 DOI: 10.1111/Evo.13650  0.593
2018 Schwahn DJ, Wang RJ, White MA, Payseur BA. Genetic Dissection of Hybrid Male Sterility Across Stages of Spermatogenesis. Genetics. PMID 30333190 DOI: 10.1534/Genetics.118.301658  0.441
2018 Payseur BA, Presgraves DC, Filatov DA. Sex Chromosomes and Speciation. Molecular Ecology. PMID 30086196 DOI: 10.1111/Mec.14828  0.335
2018 Hvala JA, Frayer ME, Payseur BA. Signatures of hybridization and speciation in genomic patterns of ancestry. Evolution; International Journal of Organic Evolution. PMID 29806154 DOI: 10.1111/Evo.13509  0.556
2017 Dapper AL, Payseur BA. Connecting theory and data to understand recombination rate evolution. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 372. PMID 29109228 DOI: 10.1098/Rstb.2016.0469  0.808
2017 Dapper AL, Payseur BA. Effects of Demographic History on the Detection of Recombination Hotspots from Linkage Disequilibrium. Molecular Biology and Evolution. PMID 29045724 DOI: 10.1093/Molbev/Msx272  0.807
2017 Wang RJ, Payseur BA. Genetics of Genome-Wide Recombination Rate Evolution in Mice from an Isolated Island. Genetics. PMID 28576862 DOI: 10.1534/Genetics.117.202382  0.596
2016 Wang RJ, Gray MM, Parmenter MD, Broman KW, Payseur BA. Recombination rate variation in mice from an isolated island. Molecular Ecology. PMID 27864900 DOI: 10.1111/Mec.13932  0.581
2016 Parmenter MD, Gray MM, Hogan CA, Ford IN, Broman KW, Vinyard CJ, Payseur BA. Genetics of Skeletal Evolution in Unusually Large Mice from Gough Island. Genetics. PMID 27694627 DOI: 10.1534/Genetics.116.193805  0.501
2016 Payseur BA. Genetic Links between Recombination and Speciation. Plos Genetics. 12: e1006066. PMID 27280290 DOI: 10.1371/Journal.Pgen.1006066  0.553
2016 Payseur BA, Rieseberg LH. A Genomic Perspective on Hybridization and Speciation. Molecular Ecology. PMID 26836441 DOI: 10.1111/Mec.13557  0.535
2016 Gasch AP, Payseur BA, Pool JE. The Power of Natural Variation for Model Organism Biology. Trends in Genetics : Tig. PMID 26777596 DOI: 10.1016/J.Tig.2015.12.003  0.427
2016 Haasl RJ, Payseur BA. Fifteen years of genomewide scans for selection: trends, lessons and unaddressed genetic sources of complication. Molecular Ecology. 25: 5-23. PMID 26224644 DOI: 10.1111/Mec.13339  0.8
2015 Wang RJ, White MA, Payseur BA. The Pace of Hybrid Incompatibility Evolution in House Mice. Genetics. PMID 26199234 DOI: 10.1534/Genetics.115.179499  0.446
2015 Gray MM, Parmenter M, Hogan C, Ford I, Cuthbert RJ, Ryan PG, Broman KW, Payseur BA. Genetics of Rapid and Extreme Size Evolution in Island Mice. Genetics. PMID 26199233 DOI: 10.1534/Genetics.115.177790  0.457
2014 Haasl RJ, Johnson RC, Payseur BA. The effects of microsatellite selection on linked sequence diversity. Genome Biology and Evolution. 6: 1843-61. PMID 25115009 DOI: 10.1093/Gbe/Evu134  0.79
2014 Haasl RJ, Payseur BA. Remarkable selective constraints on exonic dinucleotide repeats. Evolution; International Journal of Organic Evolution. 68: 2737-44. PMID 24899386 DOI: 10.1111/Evo.12460  0.78
2014 Payseur BA. Disproportionate roles for the X chromosome and proteins in adaptive evolution. Genetics. 196: 931-5. PMID 24723733 DOI: 10.1534/Genetics.113.160648  0.428
2014 Gray MM, Wegmann D, Haasl RJ, White MA, Gabriel SI, Searle JB, Cuthbert RJ, Ryan PG, Payseur BA. Demographic history of a recent invasion of house mice on the isolated Island of Gough. Molecular Ecology. 23: 1923-39. PMID 24617968 DOI: 10.1111/Mec.12715  0.767
2014 Turner LM, White MA, Tautz D, Payseur BA. Genomic networks of hybrid sterility. Plos Genetics. 10: e1004162. PMID 24586194 DOI: 10.1371/Journal.Pgen.1004162  0.506
2013 Wang RJ, Ané C, Payseur BA. The evolution of hybrid incompatibilities along a phylogeny. Evolution; International Journal of Organic Evolution. 67: 2905-22. PMID 24094342 DOI: 10.1111/Evo.12173  0.411
2013 Cutter AD, Payseur BA. Genomic signatures of selection at linked sites: unifying the disparity among species. Nature Reviews. Genetics. 14: 262-74. PMID 23478346 DOI: 10.1038/Nrg3425  0.552
2013 Haasl RJ, McCarty CA, Payseur BA. Genetic ancestry inference using support vector machines, and the active emergence of a unique American population. European Journal of Human Genetics : Ejhg. 21: 554-62. PMID 23211701 DOI: 10.1038/Ejhg.2012.258  0.77
2013 Haasl RJ, Payseur BA. Microsatellites as targets of natural selection. Molecular Biology and Evolution. 30: 285-98. PMID 23104080 DOI: 10.1093/Molbev/Mss247  0.79
2012 White MA, Ikeda A, Payseur BA. A pronounced evolutionary shift of the pseudoautosomal region boundary in house mice. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 23: 454-66. PMID 22763584 DOI: 10.1007/S00335-012-9403-5  0.428
2012 Broman KW, Kim S, Sen S, Ané C, Payseur BA. Mapping quantitative trait loci onto a phylogenetic tree. Genetics. 192: 267-79. PMID 22745229 DOI: 10.1534/Genetics.112.142448  0.437
2012 White MA, Stubbings M, Dumont BL, Payseur BA. Genetics and evolution of hybrid male sterility in house mice. Genetics. 191: 917-34. PMID 22554891 DOI: 10.1534/Genetics.112.140251  0.718
2012 Nachman MW, Payseur BA. Recombination rate variation and speciation: theoretical predictions and empirical results from rabbits and mice. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 367: 409-21. PMID 22201170 DOI: 10.1098/Rstb.2011.0249  0.671
2011 Keane TM, Goodstadt L, Danecek P, White MA, Wong K, Yalcin B, Heger A, Agam A, Slater G, Goodson M, Furlotte NA, Eskin E, NellÃ¥ker C, Whitley H, Cleak J, ... ... Payseur BA, et al. Mouse genomic variation and its effect on phenotypes and gene regulation. Nature. 477: 289-94. PMID 21921910 DOI: 10.1038/Nature10413  0.507
2011 White MA, Steffy B, Wiltshire T, Payseur BA. Genetic dissection of a key reproductive barrier between nascent species of house mice. Genetics. 189: 289-304. PMID 21750261 DOI: 10.1534/Genetics.111.129171  0.446
2011 Dumont BL, Payseur BA. Genetic analysis of genome-scale recombination rate evolution in house mice. Plos Genetics. 7: e1002116. PMID 21695226 DOI: 10.1371/Journal.Pgen.1002116  0.776
2011 Dumont BL, Payseur BA. Evolution of the genomic recombination rate in murid rodents. Genetics. 187: 643-57. PMID 21149647 DOI: 10.1534/Genetics.110.123851  0.764
2011 Dumont BL, White MA, Steffy B, Wiltshire T, Payseur BA. Extensive recombination rate variation in the house mouse species complex inferred from genetic linkage maps. Genome Research. 21: 114-25. PMID 20978138 DOI: 10.1101/Gr.111252.110  0.77
2011 Payseur BA, Jing P, Haasl RJ. A genomic portrait of human microsatellite variation. Molecular Biology and Evolution. 28: 303-12. PMID 20675409 DOI: 10.1093/Molbev/Msq198  0.794
2011 Haasl RJ, Payseur BA. Multi-locus inference of population structure: a comparison between single nucleotide polymorphisms and microsatellites. Heredity. 106: 158-71. PMID 20332809 DOI: 10.1038/Hdy.2010.21  0.754
2010 Payseur BA. Using differential introgression in hybrid zones to identify genomic regions involved in speciation. Molecular Ecology Resources. 10: 806-20. PMID 21565092 DOI: 10.1111/J.1755-0998.2010.02883.X  0.48
2010 Haasl RJ, Payseur BA. The number of alleles at a microsatellite defines the allele frequency spectrum and facilitates fast accurate estimation of theta. Molecular Biology and Evolution. 27: 2702-15. PMID 20605970 DOI: 10.1093/Molbev/Msq164  0.748
2010 Wong AK, Ruhe AL, Dumont BL, Robertson KR, Guerrero G, Shull SM, Ziegle JS, Millon LV, Broman KW, Payseur BA, Neff MW. A comprehensive linkage map of the dog genome. Genetics. 184: 595-605. PMID 19966068 DOI: 10.1534/Genetics.109.106831  0.702
2009 Shim H, Chun H, Engelman CD, Payseur BA. Genome-wide association studies using single-nucleotide polymorphisms versus haplotypes: an empirical comparison with data from the North American Rheumatoid Arthritis Consortium. Bmc Proceedings. 3: S35. PMID 20018026 DOI: 10.1186/1753-6561-3-S7-S35  0.425
2009 White MA, Ané C, Dewey CN, Larget BR, Payseur BA. Fine-scale phylogenetic discordance across the house mouse genome. Plos Genetics. 5: e1000729. PMID 19936022 DOI: 10.1371/Journal.Pgen.1000729  0.493
2009 Moyle LC, Payseur BA. Reproductive isolation grows on trees. Trends in Ecology & Evolution. 24: 591-8. PMID 19717205 DOI: 10.1016/J.Tree.2009.05.010  0.421
2009 Dumont BL, Broman KW, Payseur BA. Variation in genomic recombination rates among heterogeneous stock mice. Genetics. 182: 1345-9. PMID 19535547 DOI: 10.1534/Genetics.109.105114  0.77
2009 Payseur BA, Jing P. A genomewide comparison of population structure at STRPs and nearby SNPs in humans. Molecular Biology and Evolution. 26: 1369-77. PMID 19289600 DOI: 10.1093/Molbev/Msp052  0.477
2009 Payseur BA. Y not introgress? Insights into the genetics of speciation in European rabbits. Molecular Ecology. 18: 23-4. PMID 19140962 DOI: 10.1111/J.1365-294X.2008.04011.X  0.506
2008 Vinyard CJ, Payseur BA. Of "mice" and mammals: utilizing classical inbred mice to study the genetic architecture of function and performance in mammals. Integrative and Comparative Biology. 48: 324-37. PMID 21669795 DOI: 10.1093/Icb/Icn063  0.427
2008 Payseur BA, Place M, Weber JL. Linkage disequilibrium between STRPs and SNPs across the human genome. American Journal of Human Genetics. 82: 1039-50. PMID 18423524 DOI: 10.1016/J.Ajhg.2008.02.018  0.458
2008 Dumont BL, Payseur BA. Evolution of the genomic rate of recombination in mammals. Evolution; International Journal of Organic Evolution. 62: 276-94. PMID 18067567 DOI: 10.1111/J.1558-5646.2007.00278.X  0.761
2008 Teeter KC, Payseur BA, Harris LW, Bakewell MA, Thibodeau LM, O'Brien JE, Krenz JG, Sans-Fuentes MA, Nachman MW, Tucker PK. Genome-wide patterns of gene flow across a house mouse hybrid zone. Genome Research. 18: 67-76. PMID 18025268 DOI: 10.1101/Gr.6757907  0.694
2007 Williamson SH, Hubisz MJ, Clark AG, Payseur BA, Bustamante CD, Nielsen R. Localizing recent adaptive evolution in the human genome. Plos Genetics. 3: e90. PMID 17542651 DOI: 10.1371/Journal.Pgen.0030090  0.521
2007 Payseur BA, Place M. Prospects for association mapping in classical inbred mouse strains. Genetics. 175: 1999-2008. PMID 17277361 DOI: 10.1534/Genetics.106.067868  0.428
2007 Payseur BA, Place M. Searching the genomes of inbred mouse strains for incompatibilities that reproductively isolate their wild relatives. The Journal of Heredity. 98: 115-22. PMID 17208932 DOI: 10.1093/Jhered/Esl064  0.534
2006 Payseur BA, Cutter AD. Integrating patterns of polymorphism at SNPs and STRs. Trends in Genetics : Tig. 22: 424-9. PMID 16806567 DOI: 10.1016/J.Tig.2006.06.009  0.417
2006 Payseur BA, Clark AG, Hixson J, Boerwinkle E, Sing CF. Contrasting multi-site genotypic distributions among discordant quantitative phenotypes: the APOA1/C3/A4/A5 gene cluster and cardiovascular disease risk factors. Genetic Epidemiology. 30: 508-18. PMID 16800005 DOI: 10.1002/Gepi.20163  0.402
2005 Payseur BA, Hoekstra HE. Signatures of reproductive isolation in patterns of single nucleotide diversity across inbred strains of mice. Genetics. 171: 1905-16. PMID 16143616 DOI: 10.1534/Genetics.105.046193  0.722
2005 Payseur BA, Nachman MW. The genomics of speciation: Investigating the molecular correlates of X chromosome introgression across the hybrid zone between Mus domesticus and Mus musculus Biological Journal of the Linnean Society. 84: 523-534. DOI: 10.1111/J.1095-8312.2005.00453.X  0.681
2004 Payseur BA, Krenz JG, Nachman MW. Differential patterns of introgression across the X chromosome in a hybrid zone between two species of house mice. Evolution; International Journal of Organic Evolution. 58: 2064-78. PMID 15521462 DOI: 10.1111/J.0014-3820.2004.Tb00490.X  0.66
2004 Storz JF, Payseur BA, Nachman MW. Genome scans of DNA variability in humans reveal evidence for selective sweeps outside of Africa. Molecular Biology and Evolution. 21: 1800-11. PMID 15201398 DOI: 10.1093/Molbev/Msh192  0.687
2004 Jensen-Seaman MI, Furey TS, Payseur BA, Lu Y, Roskin KM, Chen CF, Thomas MA, Haussler D, Jacob HJ. Comparative recombination rates in the rat, mouse, and human genomes. Genome Research. 14: 528-38. PMID 15059993 DOI: 10.1101/Gr.1970304  0.511
2004 Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC, Burch PE, Okwuonu G, Hines S, Lewis L, DeRamo C, Delgado O, ... ... Payseur BA, et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature. 428: 493-521. PMID 15057822 DOI: 10.1038/Nature02426  0.588
2003 Cutter AD, Payseur BA, Salcedo T, Estes AM, Good JM, Wood E, Hartl T, Maughan H, Strempel J, Wang B, Bryan AC, Dellos M. Molecular correlates of genes exhibiting RNAi phenotypes in Caenorhabditis elegans. Genome Research. 13: 2651-7. PMID 14656969 DOI: 10.1101/Gr.1659203  0.707
2003 Cutter AD, Payseur BA. Rates of deleterious mutation and the evolution of sex in Caenorhabditis. Journal of Evolutionary Biology. 16: 812-22. PMID 14635896 DOI: 10.1046/J.1420-9101.2003.00596.X  0.39
2003 Cutter AD, Payseur BA. Selection at linked sites in the partial selfer Caenorhabditis elegans. Molecular Biology and Evolution. 20: 665-73. PMID 12679551 DOI: 10.1093/Molbev/Msg072  0.53
2002 Payseur BA, Nachman MW. Natural selection at linked sites in humans. Gene. 300: 31-42. PMID 12468083 DOI: 10.1016/S0378-1119(02)00849-1  0.675
2002 Payseur BA, Cutter AD, Nachman MW. Searching for evidence of positive selection in the human genome using patterns of microsatellite variability. Molecular Biology and Evolution. 19: 1143-53. PMID 12082133 DOI: 10.1093/Oxfordjournals.Molbev.A004172  0.713
2002 Payseur BA, Nachman MW. Gene density and human nucleotide polymorphism. Molecular Biology and Evolution. 19: 336-40. PMID 11861892 DOI: 10.1093/Oxfordjournals.Molbev.A004086  0.709
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