Hollie M. Putnam - Publications

2016- Biological Sciences University of Rhode Island, Providence, RI, United States 
Coral Biology

59 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Cornwall CE, Comeau S, Putnam H, Schoepf V. Impacts of ocean warming and acidification on calcifying coral reef taxa: mechanisms responsible and adaptive capacity. Emerging Topics in Life Sciences. PMID 35157039 DOI: 10.1042/ETLS20210226  0.306
2021 Scucchia F, Malik A, Putnam HM, Mass T. Genetic and physiological traits conferring tolerance to ocean acidification in mesophotic corals. Global Change Biology. PMID 34310005 DOI: 10.1111/gcb.15812  0.317
2021 Barott KL, Huffmyer AS, Davidson JM, Lenz EA, Matsuda SB, Hancock JR, Innis T, Drury C, Putnam HM, Gates RD. Coral bleaching response is unaltered following acclimatization to reefs with distinct environmental conditions. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34050025 DOI: 10.1073/pnas.2025435118  0.753
2021 Wong KH, Goodbody-Gringley G, de Putron SJ, Becker DM, Chequer A, Putnam HM. Brooded coral offspring physiology depends on the combined effects of parental press and pulse thermal history. Global Change Biology. PMID 33914388 DOI: 10.1111/gcb.15629  0.687
2021 Roger LM, Reich HG, Lawrence E, Li S, Vizgaudis W, Brenner N, Kumar L, Klein-Seetharaman J, Yang J, Putnam HM, Lewinski NA. Applying model approaches in non-model systems: A review and case study on coral cell culture. Plos One. 16: e0248953. PMID 33831033 DOI: 10.1371/journal.pone.0248953  0.733
2021 Putnam HM. Avenues of reef-building coral acclimatization in response to rapid environmental change. The Journal of Experimental Biology. 224. PMID 33627470 DOI: 10.1242/jeb.239319  0.324
2020 Zoccola D, Ounais N, Barthelemy D, Calcagno R, Gaill F, Henard S, Hoegh-Guldberg O, Janse M, Jaubert J, Putnam H, Salvat B, Voolstra CR, Allemand D. The World Coral Conservatory (WCC): A Noah's ark for corals to support survival of reef ecosystems. Plos Biology. 18: e3000823. PMID 32925901 DOI: 10.1371/Journal.Pbio.3000823  0.351
2020 Van Etten J, Shumaker A, Mass T, Putnam HM, Bhattacharya D. Transcriptome analysis provides a blueprint of coral egg and sperm functions. Peerj. 8: e9739. PMID 32874783 DOI: 10.7717/Peerj.9739  0.329
2020 Putnam HM, Ritson-Williams R, Cruz JA, Davidson JM, Gates RD. Environmentally-induced parental or developmental conditioning influences coral offspring ecological performance. Scientific Reports. 10: 13664. PMID 32788607 DOI: 10.1038/S41598-020-70605-X  0.561
2020 Gurr SJ, Vadopalas B, Roberts SB, Putnam HM. Metabolic recovery and compensatory shell growth of juvenile Pacific geoduck following short-term exposure to acidified seawater. Conservation Physiology. 8: coaa024. PMID 32274068 DOI: 10.1093/Conphys/Coaa024  0.303
2019 Cleves PA, Shumaker A, Lee J, Putnam HM, Bhattacharya D. Unknown to Known: Advancing Knowledge of Coral Gene Function. Trends in Genetics : Tig. PMID 31882190 DOI: 10.1016/J.Tig.2019.11.001  0.324
2019 Byrne M, Foo SA, Ross PM, Putnam HM. Limitations of cross and multigenerational plasticity for marine invertebrates faced with global climate change. Global Change Biology. PMID 31670444 DOI: 10.1111/Gcb.14882  0.452
2019 Shumaker A, Putnam HM, Qiu H, Price DC, Zelzion E, Harel A, Wagner NE, Gates RD, Yoon HS, Bhattacharya D. Genome analysis of the rice coral Montipora capitata. Scientific Reports. 9: 2571. PMID 30796282 DOI: 10.1038/S41598-019-39274-3  0.558
2019 Silbiger NJ, Goodbody-Gringley G, Bruno JF, Putnam HM. Comparative thermal performance of the reef-building coral Orbicella franksi at its latitudinal range limits Marine Biology. 166. DOI: 10.1007/S00227-019-3573-6  0.733
2018 Calosi P, Putnam HM, Twitchett RJ, Vermandele F. Marine Metazoan Modern Mass Extinction: Improving Predictions by Integrating Fossil, Modern, and Physiological Data. Annual Review of Marine Science. PMID 30216738 DOI: 10.1146/Annurev-Marine-010318-095106  0.412
2018 Eirin-Lopez JM, Putnam HM. Marine Environmental Epigenetics. Annual Review of Marine Science. PMID 29958066 DOI: 10.1146/Annurev-Marine-010318-095114  0.382
2018 Silbiger NJ, Nelson CE, Remple K, Sevilla JK, Quinlan ZA, Putnam HM, Fox MD, Donahue MJ. Nutrient pollution disrupts key ecosystem functions on coral reefs. Proceedings. Biological Sciences. 285. PMID 29875294 DOI: 10.1098/Rspb.2017.2718  0.378
2018 Gibbin EM, Krueger T, Putnam HM, Barott KL, Bodin J, Gates RD, Meibom A. Short-Term Thermal Acclimation Modifies the Metabolic Condition of the Coral Holobiont Frontiers in Marine Science. 5. DOI: 10.3389/Fmars.2018.00010  0.568
2018 Guest JR, Edmunds PJ, Gates RD, Kuffner IB, Andersson AJ, Barnes BB, Chollett I, Courtney TA, Elahi R, Gross K, Lenz EA, Mitarai S, Mumby PJ, Nelson HR, Parker BA, ... Putnam HM, et al. A framework for identifying and characterising coral reef “oases” against a backdrop of degradation Journal of Applied Ecology. 55: 2865-2875. DOI: 10.1111/1365-2664.13179  0.754
2018 Wall CB, Ricci CA, Foulds GE, Mydlarz LD, Gates RD, Putnam HM. The effects of environmental history and thermal stress on coral physiology and immunity Marine Biology. 165. DOI: 10.1007/S00227-018-3317-Z  0.585
2018 Quinlan ZA, Remple K, Fox MD, Silbiger NJ, Oliver TA, Putnam HM, Wegley Kelly L, Carlson CA, Donahue MJ, Nelson CE. Fluorescent organic exudates of corals and algae in tropical reefs are compositionally distinct and increase with nutrient enrichment Limnology and Oceanography Letters. 3: 331-340. DOI: 10.1002/Lol2.10074  0.326
2017 Madin JS, Anderson KD, Andreasen MH, Bridge TCL, Cairns SD, Connolly SR, Darling ES, Diaz M, Falster DS, Franklin EC, Gates RD, Harmer AMT, Hoogenboom MO, Huang D, Keith SA, ... ... Putnam HM, et al. Corrigendum: The Coral Trait Database, a curated database of trait information for coral species from the global oceans. Scientific Data. 4: 170174. PMID 29206222 DOI: 10.1038/Sdata.2017.174  0.524
2017 Baghdasarian G, Osberg A, Mihora D, Putnam H, Gates RD, Edmunds PJ. Effects of Temperature and pCO2 on Population Regulation of Symbiodinium spp. in a Tropical Reef Coral. The Biological Bulletin. 232: 123-139. PMID 28654331 DOI: 10.1086/692718  0.56
2017 Qiu H, Zelzion E, Putnam HM, Gates RD, Wagner NE, Adams DK, Bhattacharya D. Discovery of SCORs: Anciently derived, highly conserved gene-associated repeats in stony corals. Genomics. PMID 28634029 DOI: 10.1016/J.Ygeno.2017.06.003  0.559
2017 Putnam HM, Barott KL, Ainsworth TD, Gates RD. The Vulnerability and Resilience of Reef-Building Corals. Current Biology : Cb. 27: R528-R540. PMID 28586690 DOI: 10.1016/J.Cub.2017.04.047  0.589
2017 Putnam HM, Adams DK, Zelzion E, Wagner NE, Qiu H, Mass T, Falkowski PG, Gates RD, Bhattacharya D. Divergent evolutionary histories of DNA markers in a Hawaiian population of the coral Montipora capitata. Peerj. 5: e3319. PMID 28533967 DOI: 10.7717/Peerj.3319  0.506
2017 Sogin EM, Putnam HM, Nelson CE, Anderson P, Gates RD. Correspondence of coral holobiont metabolome with symbiotic bacteria, archaea and Symbiodinium communities. Environmental Microbiology Reports. PMID 28464532 DOI: 10.1111/1758-2229.12541  0.557
2017 van Oppen MJ, Gates RD, Blackall LL, Cantin N, Chakravarti LJ, Chan WY, Cormick C, Crean A, Damjanovic K, Epstein H, Harrison PL, Jones TA, Miller M, Pears RJ, Peplow LM, ... ... Putnam HM, et al. Shifting paradigms in restoration of the world's coral reefs. Global Change Biology. PMID 28247459 DOI: 10.1111/Gcb.13647  0.56
2017 Torda G, Donelson JM, Aranda M, Barshis DJ, Bay L, Berumen ML, Bourne DG, Cantin N, Foret S, Matz M, Miller DJ, Moya A, Putnam HM, Ravasi T, van Oppen MJH, et al. Rapid adaptive responses to climate change in corals Nature Climate Change. 7: 627-636. DOI: 10.1038/Nclimate3374  0.39
2016 Putnam HM, Davidson JM, Gates RD. Ocean acidification influences host DNA methylation and phenotypic plasticity in environmentally susceptible corals. Evolutionary Applications. 9: 1165-1178. PMID 27695524 DOI: 10.1111/Eva.12408  0.549
2016 Bhattacharya D, Agrawal S, Aranda M, Baumgarten S, Belcaid M, Drake JL, Erwin D, Foret S, Gates RD, Gruber DF, Kamel B, Lesser MP, Levy O, Liew YJ, MacManes M, ... ... Putnam HM, et al. Comparative genomics explains the evolutionary success of reef-forming corals. Elife. 5. PMID 27218454 DOI: 10.7554/Elife.13288  0.577
2016 Mass T, Putnam HM, Drake JL, Zelzion E, Gates RD, Bhattacharya D, Falkowski PG. Temporal and spatial expression patterns of biomineralization proteins during early development in the stony coral Pocillopora damicornis. Proceedings. Biological Sciences / the Royal Society. 283. PMID 27122561 DOI: 10.1098/Rspb.2016.0322  0.499
2016 Boulotte NM, Dalton SJ, Carroll AG, Harrison PL, Putnam HM, Peplow LM, van Oppen MJ. Exploring the Symbiodinium rare biosphere provides evidence for symbiont switching in reef-building corals. The Isme Journal. PMID 27093048 DOI: 10.1038/Ismej.2016.54  0.409
2016 Madin JS, Anderson KD, Andreasen MH, Bridge TC, Cairns SD, Connolly SR, Darling ES, Diaz M, Falster DS, Franklin EC, Gates RD, Hoogenboom MO, Huang D, Keith SA, Kosnik MA, ... ... Putnam HM, et al. The Coral Trait Database, a curated database of trait information for coral species from the global oceans. Scientific Data. 3: 160017. PMID 27023900 DOI: 10.1038/Sdata.2016.17  0.572
2016 Madin JS, Hoogenboom MO, Connolly SR, Darling ES, Falster DS, Huang D, Keith SA, Mizerek T, Pandolfi JM, Putnam HM, Baird AH. A Trait-Based Approach to Advance Coral Reef Science. Trends in Ecology & Evolution. PMID 26969335 DOI: 10.1016/J.Tree.2016.02.012  0.423
2016 Bhattacharya D, Agrawal S, Aranda M, Baumgarten S, Belcaid M, Drake JL, Erwin D, Foret S, Gates RD, Gruber DF, Kamel B, Lesser MP, Levy O, Liew YJ, MacManes M, ... ... Putnam HM, et al. Author response: Comparative genomics explains the evolutionary success of reef-forming corals Elife. DOI: 10.7554/Elife.13288.066  0.311
2016 Sogin EM, Putnam HM, Anderson PE, Gates RD. Metabolomic signatures of increases in temperature and ocean acidification from the reef-building coral, Pocillopora damicornis Metabolomics. 12. DOI: 10.1007/S11306-016-0987-8  0.591
2015 Cunning R, Yost DM, Guarinello ML, Putnam HM, Gates RD. Variability of Symbiodinium Communities in Waters, Sediments, and Corals of Thermally Distinct Reef Pools in American Samoa. Plos One. 10: e0145099. PMID 26713847 DOI: 10.1371/Journal.Pone.0145099  0.562
2015 Putnam HM, Gates RD. Preconditioning in the reef-building coral Pocillopora damicornis and the potential for trans-generational acclimatization in coral larvae under future climate change conditions. The Journal of Experimental Biology. 218: 2365-72. PMID 26246609 DOI: 10.1242/Jeb.123018  0.571
2015 van Oppen MJ, Oliver JK, Putnam HM, Gates RD. Building coral reef resilience through assisted evolution. Proceedings of the National Academy of Sciences of the United States of America. 112: 2307-13. PMID 25646461 DOI: 10.1073/Pnas.1422301112  0.603
2015 Gibbin EM, Putnam HM, Gates RD, Nitschke MR, Davy SK. Species-specific differences in thermal tolerance may define susceptibility to intracellular acidosis in reef corals Marine Biology. 162: 717-723. DOI: 10.1007/S00227-015-2617-9  0.582
2014 Edmunds PJ, Adjeroud M, Baskett ML, Baums IB, Budd AF, Carpenter RC, Fabina NS, Fan TY, Franklin EC, Gross K, Han X, Jacobson L, Klaus JS, McClanahan TR, O'Leary JK, ... ... Putnam HM, et al. Persistence and change in community composition of reef corals through present, past, and future climates. Plos One. 9: e107525. PMID 25272143 DOI: 10.1371/Journal.Pone.0107525  0.613
2014 Comeau S, Carpenter RC, Nojiri Y, Putnam HM, Sakai K, Edmunds PJ. Pacific-wide contrast highlights resistance of reef calcifiers to ocean acidification. Proceedings. Biological Sciences / the Royal Society. 281. PMID 25056628 DOI: 10.1098/Rspb.2014.1339  0.369
2014 Pochon X, Putnam HM, Gates RD. Multi-gene analysis of Symbiodinium dinoflagellates: a perspective on rarity, symbiosis, and evolution. Peerj. 2: e394. PMID 24883254 DOI: 10.7717/Peerj.394  0.549
2014 Gibbin EM, Putnam HM, Davy SK, Gates RD. Intracellular pH and its response to CO2-driven seawater acidification in symbiotic versus non-symbiotic coral cells. The Journal of Experimental Biology. 217: 1963-9. PMID 24625648 DOI: 10.1242/Jeb.099549  0.497
2014 Edmunds PJ, Pochon X, Levitan DR, Yost DM, Belcaid M, Putnam HM, Gates RD. Long-term changes in Symbiodinium communities in Orbicella annularis in St. John, US Virgin Islands Marine Ecology Progress Series. 506: 129-144. DOI: 10.3354/Meps10808  0.578
2014 Edmunds PJ, Burgess SC, Putnam HM, Baskett ML, Bramanti L, Fabina NS, Han X, Lesser MP, Madin JS, Wall CB, Yost DM, Gates RD. Evaluating the causal basis of ecological success within the scleractinia: an integral projection model approach Marine Biology. 161: 2719-2734. DOI: 10.1007/S00227-014-2547-Y  0.611
2013 Fabina NS, Putnam HM, Franklin EC, Stat M, Gates RD. Symbiotic specificity, association patterns, and function determine community responses to global changes: defining critical research areas for coral-Symbiodinium symbioses. Global Change Biology. 19: 3306-16. PMID 23847174 DOI: 10.1111/Gcb.12320  0.6
2013 Putnam HM, Mayfield AB, Fan TY, Chen CS, Gates RD. The physiological and molecular responses of larvae from the reef-building coral Pocillopora damicornis exposed to near-future increases in temperature and pCO2 Marine Biology. 160: 2157-2173. DOI: 10.1007/S00227-012-2129-9  0.567
2012 Edmunds PJ, Putnam HM, Gates RD. Photophysiological consequences of vertical stratification of Symbiodinium in tissue of the coral Porites lutea. The Biological Bulletin. 223: 226-35. PMID 23111134 DOI: 10.1086/Bblv223N2P226  0.483
2012 Fabina NS, Putnam HM, Franklin EC, Stat M, Gates RD. Transmission mode predicts specificity and interaction patterns in coral-Symbiodinium networks. Plos One. 7: e44970. PMID 23028711 DOI: 10.1371/Journal.Pone.0044970  0.538
2012 Mayfield AB, Chan PH, Putnam HM, Chen CS, Fan TY. The effects of a variable temperature regime on the physiology of the reef-building coral Seriatopora hystrix: results from a laboratory-based reciprocal transplant. The Journal of Experimental Biology. 215: 4183-95. PMID 22933614 DOI: 10.1242/Jeb.071688  0.379
2012 Putnam HM, Stat M, Pochon X, Gates RD. Endosymbiotic flexibility associates with environmental sensitivity in scleractinian corals. Proceedings. Biological Sciences / the Royal Society. 279: 4352-61. PMID 22933373 DOI: 10.1098/Rspb.2012.1454  0.614
2012 Pochon X, Putnam HM, Burki F, Gates RD. Identifying and characterizing alternative molecular markers for the symbiotic and free-living dinoflagellate genus Symbiodinium. Plos One. 7: e29816. PMID 22238660 DOI: 10.1371/Journal.Pone.0029816  0.531
2012 Franklin EC, Stat M, Pochon X, Putnam HM, Gates RD. GeoSymbio: a hybrid, cloud-based web application of global geospatial bioinformatics and ecoinformatics for Symbiodinium-host symbioses. Molecular Ecology Resources. 12: 369-73. PMID 22018222 DOI: 10.1111/J.1755-0998.2011.03081.X  0.522
2011 Edmunds PJ, Putnam HM, Nisbet RM, Muller EB. Benchmarks in organism performance and their use in comparative analyses. Oecologia. 167: 379-90. PMID 21553265 DOI: 10.1007/S00442-011-2004-2  0.397
2011 Putnam HM, Edmunds PJ. The physiological response of reef corals to diel fluctuations in seawater temperature Journal of Experimental Marine Biology and Ecology. 396: 216-223. DOI: 10.1016/J.Jembe.2010.10.026  0.343
2010 Putnam HM, Edmunds PJ, Fan TY. Effect of a fluctuating thermal regime on adult and larval reef corals Invertebrate Biology. 129: 199-209. DOI: 10.1111/J.1744-7410.2010.00199.X  0.34
2008 Putnam HM, Edmunds PJ, Fan TY. Effect of temperature on the settlement choice and photophysiology of larvae from the reef coral Stylophora pistillata. The Biological Bulletin. 215: 135-42. PMID 18840774 DOI: 10.2307/25470694  0.316
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