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Ido Golding - Publications

Affiliations: 
Physics University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Area:
General Biophysics, Genetics, Molecular Biology, Microbiology Biology
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51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Golding I, Amir A. Gene expression in growing cells: A biophysical primer. Arxiv. PMID 38045483  0.332
2020 Gorin G, Wang M, Golding I, Xu H. Stochastic simulation and statistical inference platform for visualization and estimation of transcriptional kinetics. Plos One. 15: e0230736. PMID 32214380 DOI: 10.1371/Journal.Pone.0230736  0.39
2019 Golding I. Revisiting Replication-Induced Transcription in Escherichia coli. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. e1900193. PMID 31750555 DOI: 10.1002/Bies.201900193  0.319
2019 Wang M, Zhang J, Xu H, Golding I. Measuring transcription at a single gene copy reveals hidden drivers of bacterial individuality. Nature Microbiology. PMID 31527794 DOI: 10.1038/S41564-019-0553-Z  0.454
2017 Golding I. Infection by bacteriophage lambda: an evolving paradigm for cellular individuality. Current Opinion in Microbiology. 43: 9-13. PMID 29107897 DOI: 10.1016/J.Mib.2017.09.014  0.341
2017 Golding I. Deciphering the Stochastic Kinetics of Gene Regulation Biophysical Journal. 112: 342a. DOI: 10.1016/J.Bpj.2016.11.1857  0.444
2016 Xu H, Skinner SO, Sokac AM, Golding I. Stochastic Kinetics of Nascent RNA. Physical Review Letters. 117. PMID 27667861 DOI: 10.1103/Physrevlett.117.128101  0.326
2016 Golding I. Single-Cell Studies of Phage λ: Hidden Treasures Under Occam's Rug. Annual Review of Virology. PMID 27482899 DOI: 10.1146/Annurev-Virology-110615-042127  0.335
2016 Sepúlveda LA, Xu H, Zhang J, Wang M, Golding I. Measurement of gene regulation in individual cells reveals rapid switching between promoter states. Science (New York, N.Y.). 351: 1218-22. PMID 26965629 DOI: 10.1126/Science.Aad0635  0.439
2016 Skinner SO, Xu H, Nagarkar-Jaiswal S, Freire PR, Zwaka TP, Golding I. Single-cell analysis of transcription kinetics across the cell cycle. Elife. 5. PMID 26824388 DOI: 10.7554/Elife.12175  0.434
2016 Skinner SO, Xu H, Nagarkar-Jaiswal S, Freire PR, Zwaka TP, Golding I. Author response: Single-cell analysis of transcription kinetics across the cell cycle Elife. DOI: 10.7554/Elife.12175.021  0.365
2015 Hsu TY, Simon LM, Neill NJ, Marcotte R, Sayad A, Bland CS, Echeverria GV, Sun T, Kurley SJ, Tyagi S, Karlin KL, Dominguez-Vidaña R, Hartman JD, Renwick A, Scorsone K, ... ... Golding I, et al. The spliceosome is a therapeutic vulnerability in MYC-driven cancer. Nature. PMID 26331541 DOI: 10.1038/Nature14985  0.351
2015 Skinner SO, Sepúlveda LA, Xu H, Golding I. Corrigendum: Measuring mRNA copy number in individual Escherichia coli cells using single-molecule fluorescent in situ hybridization. Nature Protocols. 10: 1457. PMID 26313481 DOI: 10.1038/Nprot0915-1457C  0.328
2015 Satory D, Gordon AJ, Wang M, Halliday JA, Golding I, Herman C. DksA involvement in transcription fidelity buffers stochastic epigenetic change. Nucleic Acids Research. PMID 26304546 DOI: 10.1093/Nar/Gkv839  0.366
2015 Xu H, Sepúlveda LA, Figard L, Sokac AM, Golding I. Combining protein and mRNA quantification to decipher transcriptional regulation. Nature Methods. PMID 26098021 DOI: 10.1038/Nmeth.3446  0.384
2015 Fei J, Singh D, Zhang Q, Park S, Balasubramanian D, Golding I, Vanderpool CK, Ha T. RNA biochemistry. Determination of in vivo target search kinetics of regulatory noncoding RNA. Science (New York, N.Y.). 347: 1371-4. PMID 25792329 DOI: 10.1126/Science.1258849  0.305
2014 Gordon AJ, Satory D, Wang M, Halliday JA, Golding I, Herman C. Removal of 8-oxo-GTP by MutT hydrolase is not a major contributor to transcriptional fidelity. Nucleic Acids Research. 42: 12015-26. PMID 25294823 DOI: 10.1093/Nar/Gku912  0.317
2014 Koirala S, Mears P, Sim M, Golding I, Chemla YR, Aldridge PD, Rao CV. A nutrient-tunable bistable switch controls motility in Salmonella enterica serovar Typhimurium. Mbio. 5: e01611-14. PMID 25161191 DOI: 10.1128/Mbio.01611-14  0.385
2014 Bednarz M, Halliday JA, Herman C, Golding I. Revisiting bistability in the lysis/lysogeny circuit of bacteriophage lambda. Plos One. 9: e100876. PMID 24963924 DOI: 10.1371/Journal.Pone.0100876  0.35
2014 Mears PJ, Koirala S, Rao CV, Golding I, Chemla YR. Escherichia coli swimming is robust against variations in flagellar number. Elife. 3: e01916. PMID 24520165 DOI: 10.7554/Elife.01916  0.366
2014 Golding I. A Quantitative Narrative for the Life Cycle of Bacteriophage Lambda Biophysical Journal. 106: 626a. DOI: 10.1016/J.Bpj.2013.11.3463  0.374
2014 Fei J, Singh D, Zhang Q, Park S, Golding I, Vanderpool CK, Ha T. Watching Gene Regulation by Small RNA in Bacteria with Super-Resolution Imaging Biophysical Journal. 106: 434a. DOI: 10.1016/J.Bpj.2013.11.2447  0.374
2013 Sanchez A, Golding I. Genetic determinants and cellular constraints in noisy gene expression. Science (New York, N.Y.). 342: 1188-93. PMID 24311680 DOI: 10.1126/Science.1242975  0.412
2013 Zheng L, Sepúlveda LA, Lua RC, Lichtarge O, Golding I, Sokac AM. The maternal-to-zygotic transition targets actin to promote robustness during morphogenesis. Plos Genetics. 9: e1003901. PMID 24244181 DOI: 10.1371/Journal.Pgen.1003901  0.332
2013 Skinner SO, Sepúlveda LA, Xu H, Golding I. Measuring mRNA copy number in individual Escherichia coli cells using single-molecule fluorescent in situ hybridization. Nature Protocols. 8: 1100-13. PMID 23680982 DOI: 10.1038/Nprot.2013.066  0.399
2012 Mir M, Babacan SD, Bednarz M, Do MN, Golding I, Popescu G. Visualizing Escherichia coli sub-cellular structure using sparse deconvolution Spatial Light Interference Tomography. Plos One. 7: e39816. PMID 22761910 DOI: 10.1371/Journal.Pone.0039816  0.312
2012 Min TL, Mears PJ, Golding I, Chemla YR. Chemotactic adaptation kinetics of individual Escherichia coli cells. Proceedings of the National Academy of Sciences of the United States of America. 109: 9869-74. PMID 22679285 DOI: 10.1073/Pnas.1120218109  0.348
2012 Kessler JD, Kahle KT, Sun T, Meerbrey KL, Schlabach MR, Schmitt EM, Skinner SO, Xu Q, Li MZ, Hartman ZC, Rao M, Yu P, Dominguez-Vidana R, Liang AC, Solimini NL, ... ... Golding I, et al. A SUMOylation-dependent transcriptional subprogram is required for Myc-driven tumorigenesis. Science (New York, N.Y.). 335: 348-53. PMID 22157079 DOI: 10.1126/Science.1212728  0.345
2012 Kessler JD, Kahle KT, Sun T, Meerbrey KL, Schlabach MR, Schmitt EM, Skinner SO, Xu Q, Li MZ, Hartman ZC, Rao M, Yu P, Dominguez-Vidana R, Liang AC, Solimini NL, ... ... Golding I, et al. Abstract 3091: A sumoylation-dependent transcriptional subprogram is required for Myc-driven tumorigenesis Cancer Research. 72: 3091-3091. DOI: 10.1158/1538-7445.Am2012-3091  0.347
2012 Mears PJ, Min TL, Golding I, Chemla YR. Using Optical Traps to Study Bacterial Motility and Chemotaxis at the Single-Cell Level Biophysical Journal. 102: 160a. DOI: 10.1016/J.Bpj.2011.11.873  0.367
2011 Zeng L, Golding I. Following cell-fate in E. coli after infection by phage lambda. Journal of Visualized Experiments : Jove. e3363. PMID 22025187 DOI: 10.3791/3363  0.336
2011 Mir M, Wang Z, Shen Z, Bednarz M, Bashir R, Golding I, Prasanth SG, Popescu G. Optical measurement of cycle-dependent cell growth. Proceedings of the National Academy of Sciences of the United States of America. 108: 13124-9. PMID 21788503 DOI: 10.1073/Pnas.1100506108  0.36
2011 Golding I. Decision making in living cells: lessons from a simple system. Annual Review of Biophysics. 40: 63-80. PMID 21545284 DOI: 10.1146/Annurev-Biophys-042910-155227  0.34
2011 So LH, Ghosh A, Zong C, Sepúlveda LA, Segev R, Golding I. General properties of transcriptional time series in Escherichia coli. Nature Genetics. 43: 554-60. PMID 21532574 DOI: 10.1038/Ng.821  0.611
2011 Zhang R, Rothenberg E, Fruhwirth G, Golding I, Ng T, Lopes W, Selvin PR. Rapid Two-Photon Imaging with Nanometer Accuracy of Individual Quantum Dots in a Biological Environment Biophysical Journal. 100: 478a. DOI: 10.1016/J.Bpj.2010.12.2799  0.305
2010 Zong C, So LH, Sepúlveda LA, Skinner SO, Golding I. Lysogen stability is determined by the frequency of activity bursts from the fate-determining gene. Molecular Systems Biology. 6: 440. PMID 21119634 DOI: 10.1038/Msb.2010.96  0.618
2010 Saini S, Koirala S, Floess E, Mears PJ, Chemla YR, Golding I, Aldridge C, Aldridge PD, Rao CV. FliZ induces a kinetic switch in flagellar gene expression. Journal of Bacteriology. 192: 6477-81. PMID 20935096 DOI: 10.1128/Jb.00751-10  0.325
2010 Zeng L, Skinner SO, Zong C, Sippy J, Feiss M, Golding I. Decision making at a subcellular level determines the outcome of bacteriophage infection. Cell. 141: 682-91. PMID 20478257 DOI: 10.1016/J.Cell.2010.03.034  0.327
2010 Min TL, Mears PJ, Chubiz LM, Rao CV, Golding I, Chemla YR. High Resolution, Long Term Characterization of Bacterial Motility Using Optical Tweezers Biophysical Journal. 98: 4-6. DOI: 10.1016/J.Bpj.2009.12.2245  0.312
2010 Zeng L, Skinner SO, Sippy J, Feiss M, Golding I. Decision-Making in Bacteriophage Lambda: A View From the Single Phage Biophysical Journal. 98: 14a. DOI: 10.1016/J.Bpj.2009.12.086  0.313
2009 Min TL, Mears PJ, Chubiz LM, Rao CV, Golding I, Chemla YR. High-resolution, long-term characterization of bacterial motility using optical tweezers. Nature Methods. 6: 831-5. PMID 19801991 DOI: 10.1038/Nmeth.1380  0.331
2009 Golding I. Gene Activity in Bacteria: Beyond First Approximations Biophysical Journal. 96: 205a. DOI: 10.1016/J.Bpj.2008.12.1831  0.397
2009 Zong C, Golding I. The Energy Landscape of an Epigenetic System Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.1533  0.343
2008 Golding I, Cox EC. Chapter 8: Spatiotemporal dynamics in bacterial cells: real-time studies with single-event resolution. Methods in Cell Biology. 89: 223-51. PMID 19118677 DOI: 10.1016/S0091-679X(08)00608-0  0.372
2006 Golding I, Cox EC. Protein synthesis molecule by molecule. Genome Biology. 7: 221. PMID 16938897 DOI: 10.1186/Gb-2006-7-6-221  0.312
2006 Golding I, Cox EC. Eukaryotic transcription: what does it mean for a gene to be 'on'? Current Biology : Cb. 16: R371-3. PMID 16713947 DOI: 10.1016/J.Cub.2006.04.014  0.415
2006 Golding I, Cox EC. Physical nature of bacterial cytoplasm. Physical Review Letters. 96: 098102. PMID 16606319 DOI: 10.1103/Physrevlett.96.098102  0.378
2005 Golding I, Paulsson J, Zawilski SM, Cox EC. Real-time kinetics of gene activity in individual bacteria. Cell. 123: 1025-36. PMID 16360033 DOI: 10.1016/J.Cell.2005.09.031  0.443
2005 Chen Y, Golding I, Sawai S, Guo L, Cox EC. Population fitness and the regulation of Escherichia coli genes by bacterial viruses. Plos Biology. 3: e229. PMID 15984911 DOI: 10.1371/Journal.Pbio.0030229  0.316
2004 Golding I, Cox EC. RNA dynamics in live Escherichia coli cells. Proceedings of the National Academy of Sciences of the United States of America. 101: 11310-5. PMID 15277674 DOI: 10.1073/Pnas.0404443101  0.322
2003 Ron IG, Golding I, Lifsitz-Mercer B, Ben-Jacob E. Bursts of sectors in expanding bacterial colonies as a possible model for tumor growth and metastases Physica a: Statistical Mechanics and Its Applications. 320: 485-496. DOI: 10.1016/S0378-4371(02)01547-9  0.347
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