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Nirmalya Bandyopadhyay, Ph.D. - Publications

Affiliations: 
2011 University of Florida, Gainesville, Gainesville, FL, United States 
Area:
Computer Engineering, Computer Science
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10 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Betin V, Penaranda C, Bandyopadhyay N, Yang R, Abitua A, Bhattacharyya RP, Fan A, Avraham R, Livny J, Shoresh N, Hung DT. Hybridization-based capture of pathogen mRNA enables paired host-pathogen transcriptional analysis. Scientific Reports. 9: 19244. PMID 31848386 DOI: 10.1038/S41598-019-55633-6  0.316
2017 Hudock TA, Foreman TW, Bandyopadhyay N, Gautam US, Veatch A, LoBato DN, Gentry KM, Golden NA, Cavigli A, Mueller M, Hwang SA, Hunter RL, Alvarez X, Lackner AA, Bader JS, et al. Hypoxia Sensing and Persistence Genes are Expressed During the Intra-granulomatous Survival of M. tuberculosis. American Journal of Respiratory Cell and Molecular Biology. PMID 28135421 DOI: 10.1165/Rcmb.2016-0239Oc  0.462
2015 Subbian S, Tsenova L, Kim MJ, Wainwright HC, Visser A, Bandyopadhyay N, Bader JS, Karakousis PC, Murrmann GB, Bekker LG, Russell DG, Kaplan G. Lesion-Specific Immune Response in Granulomas of Patients with Pulmonary Tuberculosis: A Pilot Study. Plos One. 10: e0132249. PMID 26133981 DOI: 10.1371/Journal.Pone.0132249  0.334
2014 Dutta NK, Bandyopadhyay N, Veeramani B, Lamichhane G, Karakousis PC, Bader JS. Systems biology-based identification of Mycobacterium tuberculosis persistence genes in mouse lungs. Mbio. 5. PMID 24549847 DOI: 10.1128/Mbio.01066-13  0.43
2013 Gregory JF, Park Y, Lamers Y, Bandyopadhyay N, Chi YY, Lee K, Kim S, da Silva V, Hove N, Ranka S, Kahveci T, Muller KE, Stevens RD, Newgard CB, Stacpoole PW, et al. Metabolomic analysis reveals extended metabolic consequences of marginal vitamin B-6 deficiency in healthy human subjects. Plos One. 8: e63544. PMID 23776431 DOI: 10.1371/Journal.Pone.0063544  0.489
2012 Bandyopadhyay N, Somaiya M, Ranka S, Kahveci T. CMRF: analyzing differential gene regulation in two group perturbation experiments. Bmc Genomics. 13: S2. PMID 22537297 DOI: 10.1186/1471-2164-13-S2-S2  0.397
2012 Bandyopadhyay N, Ranka S, Kahveci T. SSLPred: predicting synthetic sickness lethality. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 7-18. PMID 22174258  0.662
2011 Bandyopadhyay N, Somaiya M, Ranka S, Kahveci T. Identifying differentially regulated genes 2011 Ieee 1st International Conference On Computational Advances in Bio and Medical Sciences, Iccabs 2011. 19-25. DOI: 10.1109/ICCABS.2011.5729877  0.75
2009 Bandyopadhyay N, Kahveci T, Goodison S, Sun Y, Ranka S. Pathway-BasedFeature Selection Algorithm for Cancer Microarray Data. Advances in Bioinformatics. 532989. PMID 20204186 DOI: 10.1155/2009/532989  0.601
2009 Liu J, Bandyopadhyay N, Ranka S, Baudis M, Kahveci T. Inferring progression models for CGH data. Bioinformatics (Oxford, England). 25: 2208-15. PMID 19528087 DOI: 10.1093/Bioinformatics/Btp365  0.514
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