| Year |
Citation |
Score |
| 2024 |
van der Sanden B, Neveling K, Pang AWC, Shukor S, Gallagher MD, Burke SL, Kamsteeg EJ, Hastie A, Hoischen A. Optical Genome Mapping for Applications in Repeat Expansion Disorders. Current Protocols. 4: e1094. PMID 38966883 DOI: 10.1002/cpz1.1094 |
0.472 |
|
| 2024 |
Finlay D, Murad R, Hong K, Lee J, Pang AWC, Lai CY, Clifford B, Burian C, Mason J, Hastie AR, Yin J, Vuori K. Detection of Genomic Structural Variations Associated with Drug Sensitivity and Resistance in Acute Leukemia. Cancers. 16. PMID 38254907 DOI: 10.3390/cancers16020418 |
0.313 |
|
| 2023 |
Pang AWC, Kosco K, Sahajpal NS, Sridhar A, Hauenstein J, Clifford B, Estabrook J, Chitsazan AD, Sahoo T, Iqbal A, Kolhe R, Raca G, Hastie AR, Chaubey A. Analytic Validation of Optical Genome Mapping in Hematological Malignancies. Biomedicines. 11. PMID 38137484 DOI: 10.3390/biomedicines11123263 |
0.423 |
|
| 2023 |
Sahajpal NS, Mondal AK, Hastie A, Chaubey A, Kolhe R. Correction: Optical Genome Mapping for Oncology Applications. Current Protocols. 3: e946. PMID 37962549 DOI: 10.1002/cpz1.946 |
0.427 |
|
| 2023 |
Barseghyan H, Pang AWC, Clifford B, Serrano MA, Chaubey A, Hastie AR. Comparative Benchmarking of Optical Genome Mapping and Chromosomal Microarray Reveals High Technological Concordance in CNV Identification and Additional Structural Variant Refinement. Genes. 14. PMID 37895217 DOI: 10.3390/genes14101868 |
0.503 |
|
| 2023 |
Sahajpal NS, Mondal AK, Hastie A, Chaubey A, Kolhe R. Optical Genome Mapping for Oncology Applications. Current Protocols. 3: e910. PMID 37888957 DOI: 10.1002/cpz1.910 |
0.457 |
|
| 2023 |
Sahajpal NS, Mondal AK, Vashisht A, Singh H, Pang AWC, Saul D, Nivin O, Hilton B, DuPont BR, Kota V, Savage NM, Hastie AR, Chaubey A, Kolhe R. Optical Genome Mapping: Integrating Structural Variations for Precise Homologous Recombination Deficiency Score Calculation. Genes. 14. PMID 37761823 DOI: 10.3390/genes14091683 |
0.307 |
|
| 2023 |
Sahajpal NS, Mondal AK, Singh H, Vashisht A, Ananth S, Saul D, Hastie AR, Hilton B, DuPont BR, Savage NM, Kota V, Chaubey A, Cortes JE, Kolhe R. Clinical Utility of Optical Genome Mapping and 523-Gene Next Generation Sequencing Panel for Comprehensive Evaluation of Myeloid Cancers. Cancers. 15. PMID 37370824 DOI: 10.3390/cancers15123214 |
0.443 |
|
| 2023 |
Kliver S, Houck ML, Perelman PL, Totikov A, Tomarovsky A, Dudchenko O, Omer AD, Colaric Z, Weisz D, Aiden EL, Chan S, Hastie A, Komissarov A, Ryder OA, Graphodatsky A, et al. Chromosome-length genome assembly and karyotype of the endangered black-footed ferret (Mustela nigripes). The Journal of Heredity. PMID 37249392 DOI: 10.1093/jhered/esad035 |
0.428 |
|
| 2023 |
Sahajpal NS, Mondal AK, Fee T, Hilton B, Layman L, Hastie AR, Chaubey A, DuPont BR, Kolhe R. Clinical Validation and Diagnostic Utility of Optical Genome Mapping in Prenatal Diagnostic Testing. The Journal of Molecular Diagnostics : Jmd. PMID 36758723 DOI: 10.1016/j.jmoldx.2023.01.006 |
0.364 |
|
| 2022 |
Sahajpal NS, Mondal AK, Tvrdik T, Hauenstein J, Shi H, Deeb KK, Saxe D, Hastie AR, Chaubey A, Savage NM, Kota V, Kolhe R. Clinical Validation and Diagnostic Utility of Optical Genome Mapping for Enhanced Cytogenomic Analysis of Hematological Neoplasms. The Journal of Molecular Diagnostics : Jmd. PMID 36265723 DOI: 10.1016/j.jmoldx.2022.09.009 |
0.358 |
|
| 2022 |
Jarvis ED, Formenti G, Rhie A, Guarracino A, Yang C, Wood J, Tracey A, Thibaud-Nissen F, Vollger MR, Porubsky D, Cheng H, Asri M, Logsdon GA, Carnevali P, Chaisson MJP, ... ... Hastie A, et al. Semi-automated assembly of high-quality diploid human reference genomes. Nature. PMID 36261518 DOI: 10.1038/s41586-022-05325-5 |
0.557 |
|
| 2022 |
McGrath JM, Funk A, Galewski P, Ou S, Townsend B, Davenport K, Daligault H, Johnson S, Lee J, Hastie A, Darracq A, Willems G, Barnes S, Liachko I, Sullivan S, et al. A contiguous de novo genome assembly of sugar beet EL10 (Beta vulgaris L.). Dna Research : An International Journal For Rapid Publication of Reports On Genes and Genomes. PMID 36208288 DOI: 10.1093/dnares/dsac033 |
0.586 |
|
| 2022 |
Sahajpal NS, Mondal AK, Ananth S, Pundkar C, Jones K, Williams C, Fee T, Weissman A, Tripodi G, Oza E, Gavrilova-Jordan L, Omar N, Hastie AR, DuPont BR, Layman L, et al. Optical Genome Mapping and Single Nucleotide Polymorphism Microarray: An Integrated Approach for Investigating Products of Conception. Genes. 13. PMID 35456449 DOI: 10.3390/genes13040643 |
0.301 |
|
| 2022 |
Nicolle R, Siquier-Pernet K, Rio M, Guimier A, Ollivier E, Nitschke P, Bole-Feysot C, Romana S, Hastie A, Cantagrel V, Malan V. 16p13.11p11.2 triplication syndrome: a new recognizable genomic disorder characterized by optical genome mapping and whole genome sequencing. European Journal of Human Genetics : Ejhg. PMID 35388186 DOI: 10.1038/s41431-022-01094-x |
0.526 |
|
| 2022 |
Sahajpal NS, Jill Lai CY, Hastie A, Mondal AK, Dehkordi SR, van der Made CI, Fedrigo O, Al-Ajli F, Jalnapurkar S, Byrska-Bishop M, Kanagal-Shamanna R, Levy B, Schieck M, Illig T, Bacanu SA, et al. Optical genome mapping identifies rare structural variations as predisposition factors associated with severe COVID-19. Iscience. 103760. PMID 35036860 DOI: 10.1016/j.isci.2022.103760 |
0.456 |
|
| 2021 |
Dussex N, van der Valk T, Morales HE, Wheat CW, Díez-Del-Molino D, von Seth J, Foster Y, Kutschera VE, Guschanski K, Rhie A, Phillippy AM, Korlach J, Howe K, Chow W, Pelan S, ... ... Hastie AR, et al. Population genomics of the critically endangered kākāpō. Cell Genomics. 1: 100002. PMID 36777713 DOI: 10.1016/j.xgen.2021.100002 |
0.421 |
|
| 2021 |
Wang W, Klein KN, Proesmans K, Yang H, Marchal C, Zhu X, Borrman T, Hastie A, Weng Z, Bechhoefer J, Chen CL, Gilbert DM, Rhind N. Genome-wide mapping of human DNA replication by optical replication mapping supports a stochastic model of eukaryotic replication. Molecular Cell. PMID 34157308 DOI: 10.1016/j.molcel.2021.05.024 |
0.371 |
|
| 2021 |
Mao Y, Catacchio CR, Hillier LW, Porubsky D, Li R, Sulovari A, Fernandes JD, Montinaro F, Gordon DS, Storer JM, Haukness M, Fiddes IT, Murali SC, Dishuck PC, Hsieh P, ... ... Hastie AR, et al. A high-quality bonobo genome refines the analysis of hominid evolution. Nature. PMID 33953399 DOI: 10.1038/s41586-021-03519-x |
0.575 |
|
| 2021 |
Rhie A, McCarthy SA, Fedrigo O, Damas J, Formenti G, Koren S, Uliano-Silva M, Chow W, Fungtammasan A, Kim J, Lee C, Ko BJ, Chaisson M, Gedman GL, Cantin LJ, ... ... Hastie A, et al. Towards complete and error-free genome assemblies of all vertebrate species. Nature. 592: 737-746. PMID 33911273 DOI: 10.1038/s41586-021-03451-0 |
0.566 |
|
| 2021 |
Sahajpal NS, Barseghyan H, Kolhe R, Hastie A, Chaubey A. Optical Genome Mapping as a Next-Generation Cytogenomic Tool for Detection of Structural and Copy Number Variations for Prenatal Genomic Analyses. Genes. 12. PMID 33799648 DOI: 10.3390/genes12030398 |
0.392 |
|
| 2021 |
Goldrich DY, LaBarge B, Chartrand S, Zhang L, Sadowski HB, Zhang Y, Pham K, Way H, Lai CJ, Pang AWC, Clifford B, Hastie AR, Oldakowski M, Goldenberg D, Broach JR. Identification of Somatic Structural Variants in Solid Tumors by Optical Genome Mapping. Journal of Personalized Medicine. 11. PMID 33670576 DOI: 10.3390/jpm11020142 |
0.489 |
|
| 2021 |
Ebert P, Audano PA, Zhu Q, Rodriguez-Martin B, Porubsky D, Bonder MJ, Sulovari A, Ebler J, Zhou W, Serra Mari R, Yilmaz F, Zhao X, Hsieh P, Lee J, Kumar S, ... ... Hastie AR, et al. Haplotype-resolved diverse human genomes and integrated analysis of structural variation. Science (New York, N.Y.). PMID 33632895 DOI: 10.1126/science.abf7117 |
0.528 |
|
| 2020 |
Soifer I, Fong NL, Yi N, Ireland AT, Lam I, Sooknah M, Paw JS, Peluso P, Concepcion GT, Rank D, Hastie AR, Jojic V, Ruby JG, Botstein D, Roy MA. Fully Phased Sequence of a Diploid Human Genome Determined from the DNA of a Single Individual. G3 (Bethesda, Md.). PMID 32631951 DOI: 10.1534/G3.119.400995 |
0.651 |
|
| 2020 |
Low WY, Tearle R, Liu R, Koren S, Rhie A, Bickhart DM, Rosen BD, Kronenberg ZN, Kingan SB, Tseng E, Thibaud-Nissen F, Martin FJ, Billis K, Ghurye J, Hastie AR, et al. Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle. Nature Communications. 11: 2071. PMID 32350247 DOI: 10.1038/S41467-020-15848-Y |
0.613 |
|
| 2020 |
Hong K, Péneau C, Bayard Q, Imbeaud S, Pang A, Hastie A, Letouzé E, Zucman-Rossi J. Abstract 4897: Genome-wide structural variation analysis and characterization of Hepatitis B Virus integration sites in hepatocellular carcinomas using Bionano Genomics whole genome imaging Cancer Research. 80: 4897-4897. DOI: 10.1158/1538-7445.Am2020-4897 |
0.551 |
|
| 2020 |
Hastie A, Pang AW, Lee J, Lam ET, Anantharaman T, Sadowski H, Oldakowski M. Abstract 3543: Facile genome-wide detection of genomic fusions and other somatic chromosomal abnormalities through Bionano Whole Genome Imaging Cancer Research. 80: 3543-3543. DOI: 10.1158/1538-7445.Am2020-3543 |
0.613 |
|
| 2020 |
Rhind N, Wang W, Klein K, Proesmans K, Yang H, Hastie A, Yue F, Bechhoefer J, Chunlong C, Gilbert D. Single‐Molecule Optical Replication Mapping (ORM) Suggests Human Replication Timing is Regulated by Stochastic Initiation The Faseb Journal. 34: 1-1. DOI: 10.1096/Fasebj.2020.34.S1.03352 |
0.313 |
|
| 2019 |
Valliyodan B, Cannon SB, Bayer PE, Shu S, Brown AV, Ren L, Jenkins J, Chung CY, Chan TF, Daum CG, Plott C, Hastie A, Baruch K, Barry KW, Huang W, et al. Construction and comparison of three reference-quality genome assemblies for soybean. The Plant Journal : For Cell and Molecular Biology. PMID 31433882 DOI: 10.1111/Tpj.14500 |
0.501 |
|
| 2019 |
Chaisson MJP, Sanders AD, Zhao X, Malhotra A, Porubsky D, Rausch T, Gardner EJ, Rodriguez OL, Guo L, Collins RL, Fan X, Wen J, Handsaker RE, Fairley S, Kronenberg ZN, ... ... Hastie AR, et al. Multi-platform discovery of haplotype-resolved structural variation in human genomes. Nature Communications. 10: 1784. PMID 30992455 DOI: 10.1038/S41467-018-08148-Z |
0.645 |
|
| 2019 |
Bocklandt S, Hastie A, Cao H. Bionano Genome Mapping: High-Throughput, Ultra-Long Molecule Genome Analysis System for Precision Genome Assembly and Haploid-Resolved Structural Variation Discovery. Advances in Experimental Medicine and Biology. 1129: 97-118. PMID 30968363 DOI: 10.1007/978-981-13-6037-4_7 |
0.68 |
|
| 2019 |
Sharim H, Grunwald A, Gabrieli T, Michaeli Y, Margalit S, Torchinsky D, Arielly R, Nifker G, Juhasz M, Gularek F, Almalvez M, Dufault B, Chandra SS, Liu A, Bhattacharya S, ... ... Hastie AR, et al. Long-read single-molecule maps of the functional methylome. Genome Research. PMID 30846530 DOI: 10.1101/Gr.240739.118 |
0.602 |
|
| 2019 |
Levy-Sakin M, Pastor S, Mostovoy Y, Li L, Leung AKY, McCaffrey J, Young E, Lam ET, Hastie AR, Wong KHY, Chung CYL, Ma W, Sibert J, Rajagopalan R, Jin N, et al. Genome maps across 26 human populations reveal population-specific patterns of structural variation. Nature Communications. 10: 1025. PMID 30833565 DOI: 10.1038/S41467-019-08992-7 |
0.657 |
|
| 2019 |
Broach JR, Xu J, Schleicher E, Pool C, Hennessy M, Sheldon K, Annageldiyev C, Sharma A, Chang Y, Hastie A, Miller B, Goldenberg D, Claxton D, Moldovan G, Yue F. Abstract 1708: An integrated framework for genome analysis reveals numerous previously unrecognizable structural variants in leukemia patients’ samples Cancer Research. DOI: 10.1158/1538-7445.Sabcs18-1708 |
0.471 |
|
| 2018 |
Matthews BJ, Dudchenko O, Kingan SB, Koren S, Antoshechkin I, Crawford JE, Glassford WJ, Herre M, Redmond SN, Rose NH, Weedall GD, Wu Y, Batra SS, Brito-Sierra CA, Buckingham SD, ... ... Hastie AR, et al. Improved reference genome of Aedes aegypti informs arbovirus vector control. Nature. PMID 30429615 DOI: 10.1038/S41586-018-0692-Z |
0.541 |
|
| 2018 |
Himmelbach A, Ruban A, Walde I, Šimková H, Doležel J, Hastie A, Stein N, Mascher M. Discovery of multi-megabase polymorphic inversions by chromosome conformation capture sequencing in large-genome plant species. The Plant Journal : For Cell and Molecular Biology. PMID 30256471 DOI: 10.1111/Tpj.14109 |
0.493 |
|
| 2018 |
Chan S, Lam E, Saghbini M, Bocklandt S, Hastie A, Cao H, Holmlin E, Borodkin M. Structural Variation Detection and Analysis Using Bionano Optical Mapping. Methods in Molecular Biology (Clifton, N.J.). 1833: 193-203. PMID 30039375 DOI: 10.1007/978-1-4939-8666-8_16 |
0.583 |
|
| 2018 |
Kronenberg ZN, Fiddes IT, Gordon D, Murali S, Cantsilieris S, Meyerson OS, Underwood JG, Nelson BJ, Chaisson MJP, Dougherty ML, Munson KM, Hastie AR, Diekhans M, Hormozdiari F, Lorusso N, et al. High-resolution comparative analysis of great ape genomes. Science (New York, N.Y.). 360. PMID 29880660 DOI: 10.1126/Science.Aar6343 |
0.593 |
|
| 2018 |
Nowoshilow S, Schloissnig S, Fei JF, Dahl A, Pang AWC, Pippel M, Winkler S, Hastie AR, Young G, Roscito JG, Falcon F, Knapp D, Powell S, Cruz A, Cao H, et al. Author Correction: The axolotl genome and the evolution of key tissue formation regulators. Nature. PMID 29795340 DOI: 10.1038/S41586-018-0141-Z |
0.327 |
|
| 2018 |
Nowoshilow S, Schloissnig S, Fei JF, Dahl A, Pang AWC, Pippel M, Winkler S, Hastie AR, Young G, Roscito JG, Falcon F, Knapp D, Powell S, Cruz A, Cao H, et al. The axolotl genome and the evolution of key tissue formation regulators. Nature. PMID 29364872 DOI: 10.1038/Nature25458 |
0.612 |
|
| 2017 |
Jiao Y, Peluso P, Shi J, Liang T, Stitzer MC, Wang B, Campbell MS, Stein JC, Wei X, Chin CS, Guill K, Regulski M, Kumari S, Olson A, Gent J, ... ... Hastie A, et al. Improved maize reference genome with single-molecule technologies. Nature. PMID 28605751 DOI: 10.1038/Nature22971 |
0.654 |
|
| 2017 |
Beier S, Himmelbach A, Colmsee C, Zhang XQ, Barrero RA, Zhang Q, Li L, Bayer M, Bolser D, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, et al. Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4: 170044. PMID 28448065 DOI: 10.1038/Sdata.2017.44 |
0.606 |
|
| 2017 |
Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok SO, Wicker T, Radchuk V, Dockter C, Hedley PE, Russell J, Bayer M, Ramsay L, Liu H, Haberer G, Zhang XQ, ... ... Hastie A, et al. A chromosome conformation capture ordered sequence of the barley genome. Nature. 544: 427-433. PMID 28447635 DOI: 10.1038/Nature22043 |
0.591 |
|
| 2017 |
Bickhart DM, Rosen BD, Koren S, Sayre BL, Hastie AR, Chan S, Lee J, Lam ET, Liachko I, Sullivan ST, Burton JN, Huson HJ, Nystrom JC, Kelley CM, Hutchison JL, et al. Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome. Nature Genetics. PMID 28263316 DOI: 10.1038/Ng.3802 |
0.538 |
|
| 2016 |
Michael TP, Bryant D, Gutierrez R, Borisjuk N, Chu P, Zhang H, Xia J, Zhou J, Peng H, El Baidouri M, Ten Hallers B, Hastie AR, Liang T, Acosta K, Gilbert S, et al. Comprehensive Definition of Genome Features in Spirodela polyrhiza by High-Depth Physical Mapping and Short-Read DNA Sequencing Strategies. The Plant Journal : For Cell and Molecular Biology. PMID 27754575 DOI: 10.1111/Tpj.13400 |
0.645 |
|
| 2016 |
Seo JS, Rhie A, Kim J, Lee S, Sohn MH, Kim CU, Hastie A, Cao H, Yun JY, Kim J, Kuk J, Park GH, Kim J, Ryu H, Kim J, et al. De novo assembly and phasing of a Korean human genome. Nature. PMID 27706134 DOI: 10.1038/Nature20098 |
0.613 |
|
| 2016 |
Luo MC, Deal KR, Murray A, Zhu T, Hastie AR, Stedman W, Sadowski H, Saghbini M. Optical Nano-mapping and Analysis of Plant Genomes. Methods in Molecular Biology (Clifton, N.J.). 1429: 103-17. PMID 27511170 DOI: 10.1007/978-1-4939-3622-9_9 |
0.66 |
|
| 2016 |
Zook JM, Catoe D, McDaniel J, Vang L, Spies N, Sidow A, Weng Z, Liu Y, Mason CE, Alexander N, Henaff E, McIntyre AB, Chandramohan D, Chen F, Jaeger E, ... ... Hastie A, et al. Extensive sequencing of seven human genomes to characterize benchmark reference materials. Scientific Data. 3: 160025. PMID 27271295 DOI: 10.1038/Sdata.2016.25 |
0.636 |
|
| 2016 |
Mostovoy Y, Levy-Sakin M, Lam J, Lam ET, Hastie AR, Marks P, Lee J, Chu C, Lin C, Džakula Ž, Cao H, Schlebusch SA, Giorda K, Schnall-Levin M, Wall JD, et al. A hybrid approach for de novo human genome sequence assembly and phasing. Nature Methods. PMID 27159086 DOI: 10.1038/Nmeth.3865 |
0.648 |
|
| 2016 |
Martin G, Baurens FC, Droc G, Rouard M, Cenci A, Kilian A, Hastie A, Doležel J, Aury JM, Alberti A, Carreel F, D'Hont A. Improvement of the banana "Musa acuminata" reference sequence using NGS data and semi-automated bioinformatics methods. Bmc Genomics. 17: 243. PMID 26984673 DOI: 10.1186/S12864-016-2579-4 |
0.667 |
|
| 2016 |
Rosenfeld JA, Reeves D, Brugler MR, Narechania A, Simon S, Durrett R, Foox J, Shianna K, Schatz MC, Gandara J, Afshinnekoo E, Lam ET, Hastie AR, Chan S, Cao H, et al. Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius. Nature Communications. 7: 10164. PMID 26836631 DOI: 10.1038/Ncomms10164 |
0.479 |
|
| 2016 |
Staňková H, Hastie AR, Chan S, Vrána J, Tulpová Z, Kubaláková M, Visendi P, Hayashi S, Luo M, Batley J, Edwards D, Doležel J, Šimková H. BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes. Plant Biotechnology Journal. PMID 26801360 DOI: 10.1111/Pbi.12513 |
0.644 |
|
| 2015 |
VanBuren R, Bryant D, Edger PP, Tang H, Burgess D, Challabathula D, Spittle K, Hall R, Gu J, Lyons E, Freeling M, Bartels D, Ten Hallers B, Hastie A, Michael TP, et al. Single-molecule sequencing of the desiccation-tolerant grass Oropetium thomaeum. Nature. 527: 508-11. PMID 26560029 DOI: 10.1038/Nature15714 |
0.65 |
|
| 2015 |
Mak AC, Lai YY, Lam ET, Kwok TP, Leung AK, Poon A, Mostovoy Y, Hastie AR, Stedman W, Anantharaman T, Andrews W, Zhou X, Pang AW, Dai H, Chu C, et al. Genome-Wide Structural Variation Detection by Genome Mapping on Nanochannel Arrays. Genetics. PMID 26510793 DOI: 10.1534/Genetics.115.183483 |
0.649 |
|
| 2015 |
Pendleton M, Sebra R, Pang AW, Ummat A, Franzen O, Rausch T, Stütz AM, Stedman W, Anantharaman T, Hastie A, Dai H, Fritz MH, Cao H, Cohain A, Deikus G, et al. Assembly and diploid architecture of an individual human genome via single-molecule technologies. Nature Methods. PMID 26121404 DOI: 10.1038/Nmeth.3454 |
0.617 |
|
| 2015 |
Usher CL, Handsaker RE, Esko T, Tuke MA, Weedon MN, Hastie AR, Cao H, Moon JE, Kashin S, Fuchsberger C, Metspalu A, Pato CN, Pato MT, McCarthy MI, Boehnke M, et al. Structural forms of the human amylase locus and their relationships to SNPs, haplotypes and obesity. Nature Genetics. PMID 26098870 DOI: 10.1038/Ng.3340 |
0.521 |
|
| 2015 |
English AC, Salerno WJ, Hampton OA, Gonzaga-Jauregui C, Ambreth S, Ritter DI, Beck CR, Davis CF, Dahdouli M, Ma S, Carroll A, Veeraraghavan N, Bruestle J, Drees B, Hastie A, et al. Assessing structural variation in a personal genome-towards a human reference diploid genome. Bmc Genomics. 16: 286. PMID 25886820 DOI: 10.1186/S12864-015-1479-3 |
0.637 |
|
| 2015 |
Cao H, Hastie A, Pang A, Andrews W, Anantharaman T, Chan T, Saghbini M, Sadoski H, Austin M, Dzakula Z, Dickinson T, Holmlin E, Xun X, Kwok P, Rossi M. Abstract 4746: Mapping the “dark matter” of cancer genome - Long repeats, complex structural variations with nanochannel technology Cancer Research. 75: 4746-4746. DOI: 10.1158/1538-7445.Am2015-4746 |
0.677 |
|
| 2015 |
Anfora A, Chan S, Hastie A, Saghbini MG, Hallers BFHT. Making Platinum Genomes Feasible Genetic Engineering & Biotechnology News. 35: 16-17. DOI: 10.1089/Gen.35.14.09 |
0.575 |
|
| 2015 |
Reifenberger JG, Dzakula Z, Dergachev V, Anantharaman T, Hastie A, Chan S, Cao H. Mapping and De Novo Assembly of Long Barcoded Molecules of DNA from a Cancer Genome Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2014.11.822 |
0.615 |
|
| 2014 |
Cao H, Hastie AR, Cao D, Lam ET, Sun Y, Huang H, Liu X, Lin L, Andrews W, Chan S, Huang S, Tong X, Requa M, Anantharaman T, Krogh A, et al. Rapid detection of structural variation in a human genome using nanochannel-based genome mapping technology. Gigascience. 3: 34. PMID 25671094 DOI: 10.1186/2047-217X-3-34 |
0.68 |
|
| 2014 |
Hastie A, Lam E, Dai H, Andrews W, Pang A, Anantharaman T, Saghbini M, Sadoski H, Austin M, Dickinson T, Yang X, Dzakula Z, Rossi MR, Kwok P, Xu X, et al. Feasibility of Population Scale Comprehensive Identification and Analysis of Complex Structural Variations in Cancer Genome Using Nanochannel Array Blood. 124: 476-476. DOI: 10.1182/Blood.V124.21.476.476 |
0.65 |
|
| 2013 |
Hastie AR, Dong L, Smith A, Finklestein J, Lam ET, Huo N, Cao H, Kwok PY, Deal KR, Dvorak J, Luo MC, Gu Y, Xiao M. Rapid genome mapping in nanochannel arrays for highly complete and accurate de novo sequence assembly of the complex Aegilops tauschii genome. Plos One. 8: e55864. PMID 23405223 DOI: 10.1371/Journal.Pone.0055864 |
0.686 |
|
| 2012 |
Lam ET, Hastie A, Lin C, Ehrlich D, Das SK, Austin MD, Deshpande P, Cao H, Nagarajan N, Xiao M, Kwok PY. Genome mapping on nanochannel arrays for structural variation analysis and sequence assembly. Nature Biotechnology. 30: 771-6. PMID 22797562 DOI: 10.1038/Nbt.2303 |
0.621 |
|
| 2012 |
Baday M, Cravens A, Hastie A, Kim H, Kudeki DE, Kwok PY, Xiao M, Selvin PR. Multicolor super-resolution DNA imaging for genetic analysis Nano Letters. 12: 3861-3866. PMID 22698062 DOI: 10.1021/Nl302069Q |
0.381 |
|
| 2012 |
Baday M, Hastie A, Cravens A, Kudeki DE, Xiao M, Selvin P. Advance High Resolution DNA Mapping Technique to Identify Genomic Variations Biophysical Journal. 102: 420a. DOI: 10.1016/J.Bpj.2011.11.2295 |
0.474 |
|
| 2011 |
Austin MD, Deshpande P, Requa M, Kunkel M, Sadowski H, Bozinov D, Sibert J, Gallagher S, Stedman W, Fernandes N, Thomas A, Das S, Hastie A, Finklestein J, Marlin A, et al. Single-molecule rapid imaging of linear genomes in nanochannel array Materials Research Society Symposium Proceedings. 1346: 1-9. DOI: 10.1557/Opl.2011.866 |
0.601 |
|
| 2007 |
Hastie AR, Pruitt SC. Yeast two-hybrid interaction partner screening through in vivo Cre-mediated Binary Interaction Tag generation. Nucleic Acids Research. 35: e141. PMID 17986461 DOI: 10.1093/Nar/Gkm894 |
0.633 |
|
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