| Year |
Citation |
Score |
| 2024 |
Gross R, Yelin I, Lázár V, Datta MS, Kishony R. Beta-lactamase dependent and independent evolutionary paths to high-level ampicillin resistance. Nature Communications. 15: 5383. PMID 38918379 DOI: 10.1038/s41467-024-49621-2 |
0.386 |
|
| 2022 |
Shaer Tamar E, Kishony R. Multistep diversification in spatiotemporal bacterial-phage coevolution. Nature Communications. 13: 7971. PMID 36577749 DOI: 10.1038/s41467-022-35351-w |
0.374 |
|
| 2022 |
Lázár V, Snitser O, Barkan D, Kishony R. Antibiotic combinations reduce Staphylococcus aureus clearance. Nature. PMID 36198788 DOI: 10.1038/s41586-022-05260-5 |
0.333 |
|
| 2022 |
Chung H, Merakou C, Schaefers MM, Flett KB, Martini S, Lu R, Blumenthal JA, Webster SS, Cross AR, Al Ahmar R, Halpin E, Anderson M, Moore NS, Snesrud EC, Yu HD, ... ... Kishony R, et al. Rapid expansion and extinction of antibiotic resistance mutations during treatment of acute bacterial respiratory infections. Nature Communications. 13: 1231. PMID 35264582 DOI: 10.1038/s41467-022-28188-w |
0.363 |
|
| 2022 |
Stracy M, Snitser O, Yelin I, Amer Y, Parizade M, Katz R, Rimler G, Wolf T, Herzel E, Koren G, Kuint J, Foxman B, Chodick G, Shalev V, Kishony R. Minimizing treatment-induced emergence of antibiotic resistance in bacterial infections. Science (New York, N.Y.). 375: 889-894. PMID 35201862 DOI: 10.1126/science.abg9868 |
0.308 |
|
| 2020 |
Russ D, Glaser F, Shaer Tamar E, Yelin I, Baym M, Kelsic ED, Zampaloni C, Haldimann A, Kishony R. Escape mutations circumvent a tradeoff between resistance to a beta-lactam and resistance to a beta-lactamase inhibitor. Nature Communications. 11: 2029. PMID 32332717 DOI: 10.1038/S41467-020-15666-2 |
0.673 |
|
| 2020 |
Andersson DI, Balaban NQ, Baquero F, Courvalin P, Glaser P, Gophna U, Kishony R, Molin S, Tønjum T. Antibiotic resistance: turning evolutionary principles into clinical reality. Fems Microbiology Reviews. PMID 31981358 DOI: 10.1093/Femsre/Fuaa001 |
0.438 |
|
| 2019 |
Yelin I, Flett KB, Merakou C, Mehrotra P, Stam J, Snesrud E, Hinkle M, Lesho E, McGann P, McAdam AJ, Sandora TJ, Kishony R, Priebe GP. Genomic and epidemiological evidence of bacterial transmission from probiotic capsule to blood in ICU patients. Nature Medicine. PMID 31700189 DOI: 10.1038/S41591-019-0626-9 |
0.329 |
|
| 2019 |
Lázár V, Kishony R. Transient antibiotic resistance calls for attention. Nature Microbiology. 4: 1606-1607. PMID 31541208 DOI: 10.1038/S41564-019-0571-X |
0.41 |
|
| 2019 |
Yelin I, Snitser O, Novich G, Katz R, Tal O, Parizade M, Chodick G, Koren G, Shalev V, Kishony R. Personal clinical history predicts antibiotic resistance of urinary tract infections. Nature Medicine. PMID 31273328 DOI: 10.1038/S41591-019-0503-6 |
0.411 |
|
| 2019 |
Kaminski Strauss S, Schirman D, Jona G, Brooks AN, Kunjapur AM, Nguyen Ba AN, Flint A, Solt A, Mershin A, Dixit A, Yona AH, Csörgő B, Busby BP, Hennig BP, Pál C, ... ... Kishony R, et al. Evolthon: A community endeavor to evolve lab evolution. Plos Biology. 17: e3000182. PMID 30925180 DOI: 10.1371/Journal.Pbio.3000182 |
0.336 |
|
| 2018 |
Datta MS, Kishony R. A spotlight on bacterial mutations for 75 years. Nature. 563: 633-644. PMID 30478371 DOI: 10.1038/D41586-018-07521-8 |
0.341 |
|
| 2018 |
Russ D, Kishony R. Additivity of inhibitory effects in multidrug combinations. Nature Microbiology. PMID 30323252 DOI: 10.1038/S41564-018-0252-1 |
0.335 |
|
| 2018 |
Palmer AC, Chait R, Kishony R. Non-optimal gene expression creates latent potential for antibiotic resistance. Molecular Biology and Evolution. PMID 30169679 DOI: 10.1093/Molbev/Msy163 |
0.421 |
|
| 2018 |
Wehrens M, Ershov D, Rozendaal R, Walker N, Schultz D, Kishony R, Levin PA, Tans SJ. Size Laws and Division Ring Dynamics in Filamentous Escherichia coli cells. Current Biology : Cb. PMID 29502951 DOI: 10.1016/J.Cub.2018.02.006 |
0.307 |
|
| 2018 |
Yelin I, Kishony R. Antibiotic Resistance. Cell. 172: 1136-1136.e1. PMID 29474914 DOI: 10.1016/j.cell.2018.02.018 |
0.354 |
|
| 2017 |
Schultz D, Palmer AC, Kishony R. Regulatory Dynamics Determine Cell Fate following Abrupt Antibiotic Exposure. Cell Systems. PMID 29102611 DOI: 10.1016/J.Cels.2017.10.002 |
0.392 |
|
| 2017 |
Chung H, Lieberman TD, Vargas SO, Flett KB, McAdam AJ, Priebe GP, Kishony R. Global and local selection acting on the pathogen Stenotrophomonas maltophilia in the human lung. Nature Communications. 8: 14078. PMID 28102223 DOI: 10.1038/Ncomms14078 |
0.375 |
|
| 2016 |
Gerardin Y, Springer M, Kishony R. A competitive trade-off limits the selective advantage of increased antibiotic production. Nature Microbiology. 1: 16175. PMID 27668360 DOI: 10.1038/Nmicrobiol.2016.175 |
0.424 |
|
| 2016 |
Stone LK, Baym M, Lieberman TD, Chait R, Clardy J, Kishony R. Compounds that select against the tetracycline-resistance efflux pump. Nature Chemical Biology. PMID 27642863 DOI: 10.1038/Nchembio.2176 |
0.696 |
|
| 2016 |
Baym M, Lieberman TD, Kelsic ED, Chait R, Gross R, Yelin I, Kishony R. Spatiotemporal microbial evolution on antibiotic landscapes. Science (New York, N.Y.). 353: 1147-51. PMID 27609891 DOI: 10.1126/Science.Aag0822 |
0.716 |
|
| 2016 |
Chait R, Palmer AC, Yelin I, Kishony R. Pervasive selection for and against antibiotic resistance in inhomogeneous multistress environments. Nature Communications. 7: 10333. PMID 26787239 DOI: 10.1038/Ncomms10333 |
0.451 |
|
| 2016 |
Baym M, Stone LK, Kishony R. Multidrug evolutionary strategies to reverse antibiotic resistance. Science (New York, N.Y.). 351: aad3292. PMID 26722002 DOI: 10.1126/Science.Aad3292 |
0.735 |
|
| 2015 |
Wang KK, Stone LK, Lieberman TD, Shavit M, Baasov T, Kishony R. A hybrid drug limits resistance by evading the action of the multiple antibiotic resistance pathway. Molecular Biology and Evolution. PMID 26538141 DOI: 10.1093/Molbev/Msv243 |
0.48 |
|
| 2015 |
Palmer AC, Toprak E, Baym M, Kim S, Veres A, Bershtein S, Kishony R. Delayed commitment to evolutionary fate in antibiotic resistance fitness landscapes. Nature Communications. 6: 7385. PMID 26060115 DOI: 10.1038/Ncomms8385 |
0.718 |
|
| 2015 |
Baym M, Kryazhimskiy S, Lieberman TD, Chung H, Desai MM, Kishony R. Inexpensive multiplexed library preparation for megabase-sized genomes. Plos One. 10: e0128036. PMID 26000737 DOI: 10.1371/Journal.Pone.0128036 |
0.639 |
|
| 2015 |
Kelsic ED, Zhao J, Vetsigian K, Kishony R. Counteraction of antibiotic production and degradation stabilizes microbial communities. Nature. 521: 516-9. PMID 25992546 DOI: 10.1038/Nature14485 |
0.337 |
|
| 2015 |
Selmecki AM, Maruvka YE, Richmond PA, Guillet M, Shoresh N, Sorenson AL, De S, Kishony R, Michor F, Dowell R, Pellman D. Polyploidy can drive rapid adaptation in yeast. Nature. 519: 349-52. PMID 25731168 DOI: 10.1038/Nature14187 |
0.379 |
|
| 2015 |
Baym M, Kryazhimskiy S, Lieberman TD, Chung H, Desai MM, Kishony R. Correction: Inexpensive multiplexed library preparation for megabase-sized genomes Plos One. 10. DOI: 10.1371/journal.pone.0131262 |
0.614 |
|
| 2014 |
Kishony R, Collins JJ. Editorial overview: Antimicrobials: grappling with the complexities of antibiotics and resistance. Current Opinion in Microbiology. 21: v-vi. PMID 25444122 DOI: 10.1016/J.Mib.2014.10.004 |
0.427 |
|
| 2014 |
Kim S, Lieberman TD, Kishony R. Alternating antibiotic treatments constrain evolutionary paths to multidrug resistance. Proceedings of the National Academy of Sciences of the United States of America. 111: 14494-9. PMID 25246554 DOI: 10.1073/Pnas.1409800111 |
0.48 |
|
| 2014 |
Palmer AC, Kishony R. Opposing effects of target overexpression reveal drug mechanisms. Nature Communications. 5: 4296. PMID 24980690 DOI: 10.1038/Ncomms5296 |
0.382 |
|
| 2014 |
Lieberman TD, Flett KB, Yelin I, Martin TR, McAdam AJ, Priebe GP, Kishony R. Genetic variation of a bacterial pathogen within individuals with cystic fibrosis provides a record of selective pressures. Nature Genetics. 46: 82-7. PMID 24316980 DOI: 10.1038/Ng.2848 |
0.402 |
|
| 2013 |
Toprak E, Veres A, Yildiz S, Pedraza JM, Chait R, Paulsson J, Kishony R. Building a morbidostat: an automated continuous-culture device for studying bacterial drug resistance under dynamically sustained drug inhibition. Nature Protocols. 8: 555-67. PMID 23429717 DOI: 10.1038/Nprot.Nprot.2013.021 |
0.615 |
|
| 2013 |
Palmer AC, Kishony R. Understanding, predicting and manipulating the genotypic evolution of antibiotic resistance. Nature Reviews. Genetics. 14: 243-8. PMID 23419278 DOI: 10.1038/Nrg3351 |
0.485 |
|
| 2013 |
Toprak E, Palmer AC, Kim S, Veres A, Bershtein S, Kishony R. Evolution of Antibiotic Resistance through a Multi-Peaked Adaptive Landscape Biophysical Journal. 104: 660a. DOI: 10.1016/J.Bpj.2012.11.3644 |
0.518 |
|
| 2012 |
Skurnik D, Davis MR, Benedetti D, Moravec KL, Cywes-Bentley C, Roux D, Traficante DC, Walsh RL, Maira-Litrà n T, Cassidy SK, Hermos CR, Martin TR, Thakkallapalli EL, Vargas SO, McAdam AJ, ... ... Kishony R, et al. Targeting pan-resistant bacteria with antibodies to a broadly conserved surface polysaccharide expressed during infection. The Journal of Infectious Diseases. 205: 1709-18. PMID 22448004 DOI: 10.1093/Infdis/Jis254 |
0.424 |
|
| 2012 |
Ernebjerg M, Kishony R. Distinct growth strategies of soil bacteria as revealed by large-scale colony tracking. Applied and Environmental Microbiology. 78: 1345-52. PMID 22194284 DOI: 10.1128/Aem.06585-11 |
0.314 |
|
| 2012 |
Toprak E, Veres A, Michel JB, Chait R, Hartl DL, Kishony R. Evolutionary paths to antibiotic resistance under dynamically sustained drug selection. Nature Genetics. 44: 101-5. PMID 22179135 DOI: 10.1038/Ng.1034 |
0.508 |
|
| 2012 |
Chait R, Vetsigian K, Kishony R. What counters antibiotic resistance in nature? Nature Chemical Biology. 8: 2-5. PMID 22173342 DOI: 10.1038/Nchembio.745 |
0.446 |
|
| 2011 |
Lieberman TD, Michel JB, Aingaran M, Potter-Bynoe G, Roux D, Davis MR, Skurnik D, Leiby N, LiPuma JJ, Goldberg JB, McAdam AJ, Priebe GP, Kishony R. Parallel bacterial evolution within multiple patients identifies candidate pathogenicity genes. Nature Genetics. 43: 1275-80. PMID 22081229 DOI: 10.1038/Ng.997 |
0.402 |
|
| 2011 |
Bush K, Courvalin P, Dantas G, Davies J, Eisenstein B, Huovinen P, Jacoby GA, Kishony R, Kreiswirth BN, Kutter E, Lerner SA, Levy S, Lewis K, Lomovskaya O, Miller JH, et al. Tackling antibiotic resistance. Nature Reviews. Microbiology. 9: 894-6. PMID 22048738 DOI: 10.1038/Nrmicro2693 |
0.43 |
|
| 2011 |
Vetsigian K, Jajoo R, Kishony R. Structure and evolution of Streptomyces interaction networks in soil and in silico. Plos Biology. 9: e1001184. PMID 22039352 DOI: 10.1371/Journal.Pbio.1001184 |
0.322 |
|
| 2011 |
Bollenbach T, Kishony R. Resolution of gene regulatory conflicts caused by combinations of antibiotics. Molecular Cell. 42: 413-25. PMID 21596308 DOI: 10.1016/J.Molcel.2011.04.016 |
0.331 |
|
| 2010 |
Chait R, Shrestha S, Shah AK, Michel JB, Kishony R. A differential drug screen for compounds that select against antibiotic resistance. Plos One. 5: e15179. PMID 21209699 DOI: 10.1371/Journal.Pone.0015179 |
0.45 |
|
| 2010 |
Torella JP, Chait R, Kishony R. Optimal drug synergy in antimicrobial treatments. Plos Computational Biology. 6: e1000796. PMID 20532210 DOI: 10.1371/Journal.Pcbi.1000796 |
0.437 |
|
| 2010 |
Palmer AC, Angelino E, Kishony R. Chemical decay of an antibiotic inverts selection for resistance. Nature Chemical Biology. 6: 244. PMID 20154670 DOI: 10.1038/Nchembio0310-244A |
0.317 |
|
| 2010 |
Palmer AC, Angelino E, Kishony R. Chemical decay of an antibiotic inverts selection for resistance. Nature Chemical Biology. 6: 105-7. PMID 20081825 DOI: 10.1038/Nchembio.289 |
0.447 |
|
| 2009 |
Bollenbach T, Quan S, Chait R, Kishony R. Nonoptimal microbial response to antibiotics underlies suppressive drug interactions. Cell. 139: 707-18. PMID 19914165 DOI: 10.1016/J.Cell.2009.10.025 |
0.328 |
|
| 2009 |
Swoboda JG, Meredith TC, Campbell J, Brown S, Suzuki T, Bollenbach T, Malhowski AJ, Kishony R, Gilmore MS, Walker S. Discovery of a small molecule that blocks wall teichoic acid biosynthesis in Staphylococcus aureus. Acs Chemical Biology. 4: 875-83. PMID 19689117 DOI: 10.1021/Cb900151K |
0.352 |
|
| 2009 |
Yeh PJ, Hegreness MJ, Aiden AP, Kishony R. Drug interactions and the evolution of antibiotic resistance. Nature Reviews. Microbiology. 7: 460-6. PMID 19444248 DOI: 10.1038/Nrmicro2133 |
0.399 |
|
| 2008 |
Michel JB, Yeh PJ, Chait R, Moellering RC, Kishony R. Drug interactions modulate the potential for evolution of resistance. Proceedings of the National Academy of Sciences of the United States of America. 105: 14918-23. PMID 18815368 DOI: 10.1073/Pnas.0800944105 |
0.465 |
|
| 2008 |
Hegreness M, Shoresh N, Damian D, Hartl D, Kishony R. Accelerated evolution of resistance in multidrug environments. Proceedings of the National Academy of Sciences of the United States of America. 105: 13977-81. PMID 18779569 DOI: 10.1073/Pnas.0805965105 |
0.46 |
|
| 2008 |
Pearl S, Gabay C, Kishony R, Oppenheim A, Balaban NQ. Nongenetic individuality in the host-phage interaction. Plos Biology. 6: e120. PMID 18494559 DOI: 10.1371/Journal.Pbio.0060120 |
0.379 |
|
| 2008 |
Presser A, Elowitz MB, Kellis M, Kishony R. The evolutionary dynamics of the Saccharomyces cerevisiae protein interaction network after duplication. Proceedings of the National Academy of Sciences of the United States of America. 105: 950-4. PMID 18199840 DOI: 10.1073/Pnas.0707293105 |
0.565 |
|
| 2007 |
Chait R, Craney A, Kishony R. Antibiotic interactions that select against resistance. Nature. 446: 668-71. PMID 17410176 DOI: 10.1038/Nature05685 |
0.497 |
|
| 2007 |
Hegreness M, Kishony R. Analysis of genetic systems using experimental evolution and whole-genome sequencing. Genome Biology. 8: 201. PMID 17274841 DOI: 10.1186/Gb-2007-8-1-201 |
0.36 |
|
| 2006 |
Yeh P, Tschumi AI, Kishony R. Functional classification of drugs by properties of their pairwise interactions. Nature Genetics. 38: 489-94. PMID 16550172 DOI: 10.1038/Ng1755 |
0.337 |
|
| 2006 |
Hegreness M, Shoresh N, Hartl D, Kishony R. An equivalence principle for the incorporation of favorable mutations in asexual populations. Science (New York, N.Y.). 311: 1615-7. PMID 16543462 DOI: 10.1126/Science.1122469 |
0.38 |
|
| 2005 |
Kussell E, Kishony R, Balaban NQ, Leibler S. Bacterial persistence: a model of survival in changing environments. Genetics. 169: 1807-14. PMID 15687275 DOI: 10.1534/Genetics.104.035352 |
0.613 |
|
| 2005 |
Segrè D, Deluna A, Church GM, Kishony R. Modular epistasis in yeast metabolism. Nature Genetics. 37: 77-83. PMID 15592468 DOI: 10.1038/Ng1489 |
0.317 |
|
| 2003 |
Kishony R, Leibler S. Environmental stresses can alleviate the average deleterious effect of mutations. Journal of Biology. 2: 14. PMID 12775217 DOI: 10.1186/1475-4924-2-14 |
0.582 |
|
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