Jun Liu - Publications

University of California, San Francisco, San Francisco, CA 
Chemical biology

55 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Srivastava S, Sandhu N, Liu J, Xie YH. AI-Driven Spectral Decomposition: Predicting the Most Probable Protein Compositions from Surface Enhanced Raman Spectroscopy Spectra of Amino Acids. Bioengineering (Basel, Switzerland). 11. PMID 38790349 DOI: 10.3390/bioengineering11050482  0.307
2024 Wang H, Zhao S, Xia X, Liu J, Sun F, Kong B. Interaction of the extracellular protease from with meat proteins elucidated via spectroscopic and molecular docking. Food Chemistry: X. 21: 101204. PMID 38379807 DOI: 10.1016/j.fochx.2024.101204  0.359
2023 Sun F, Cheng T, Ren S, Yang B, Liu J, Huang Z, Guo Z, Wang Z. Soy protein isolate/carboxymethyl cellulose sodium complexes system stabilized high internal phase Pickering emulsions: Stabilization mechanism based on noncovalent interaction. International Journal of Biological Macromolecules. 128381. PMID 38000596 DOI: 10.1016/j.ijbiomac.2023.128381  0.36
2023 Liu J, Yang B, Wang L. Residue selective crosslinking of proteins through photoactivatable or proximity-enabled reactivity. Current Opinion in Chemical Biology. 74: 102285. PMID 36913752 DOI: 10.1016/j.cbpa.2023.102285  0.572
2022 Ghelichkhani F, Gonzalez FA, Kapitonova MA, Schaefer-Ramadan SA, Liu J, Cheng R, Rozovsky S. Selenoprotein S: A versatile disordered protein. Archives of Biochemistry and Biophysics. 109427. PMID 36241082 DOI: 10.1016/j.abb.2022.109427  0.687
2022 Yu B, Li S, Tabata T, Wang N, Cao L, Kumar GR, Sun W, Liu J, Ott M, Wang L. Accelerating PERx Reaction Enables Covalent Nanobodies for Potent Neutralization of SARS-Cov-2 and Variants. Chem. PMID 35874165 DOI: 10.1016/j.chempr.2022.07.012  0.71
2022 Tai X, Zhang Y, Yao J, Li X, Liu J, Han J, Lyu J, Lin G, Zhang C. Pharmacological Modulation of Melanocortin 1 Receptor Signaling by Mrap Proteins in . Frontiers in Endocrinology. 13: 892407. PMID 35795143 DOI: 10.3389/fendo.2022.892407  0.311
2022 Yu B, Li S, Tabata T, Wang N, Kumar GR, Liu J, Ott MM, Wang L. Accelerating PERx Reaction Enables Covalent Nanobodies for Potent Neutralization of SARS-Cov-2 and Variants. Biorxiv : the Preprint Server For Biology. PMID 35313590 DOI: 10.1101/2022.03.11.483867  0.69
2022 Fu W, Xu L, Yu Q, Fang J, Zhao G, Li Y, Pan C, Dong H, Wang D, Ren H, Guo Y, Liu Q, Liu J, Chen X. Artificial Intelligent Olfactory System for the Diagnosis of Parkinson's Disease. Acs Omega. 7: 4001-4010. PMID 35155895 DOI: 10.1021/acsomega.1c05060  0.483
2021 Cheng R, Liu J, Daithankar V, Rozovsky S. Applying selenocysteine-mediated expressed protein ligation to prepare the membrane enzyme selenoprotein S. Methods in Enzymology. 662: 159-185. PMID 35101209 DOI: 10.1016/bs.mie.2021.10.023  0.69
2021 Liu J, Cao L, Klauser PC, Cheng R, Berdan VY, Sun W, Wang N, Ghelichkhani F, Yu B, Rozovsky S, Wang L. A Genetically Encoded Fluorosulfonyloxybenzoyl-l-lysine for Expansive Covalent Bonding of Proteins via SuFEx Chemistry. Journal of the American Chemical Society. PMID 34213894 DOI: 10.1021/jacs.1c04259  0.79
2021 Cao L, Liu J, Ghelichkhani F, Rozovsky S, Wang L. Genetic Incorporation of  ε-N-benzoyllysine by Engineering Methanomethylophilus alvus Pyrrolysyl-tRNA Synthetase. Chembiochem : a European Journal of Chemical Biology. PMID 34118176 DOI: 10.1002/cbic.202100218  0.752
2020 Liu J, Cheng R, Van Eps N, Wang N, Morizumi T, Ou WL, Klauser P, Rozovsky S, Ernst OP, Wang L. Genetically Encoded Quinone Methides Enabling Rapid, Site-specific, and Photo-controlled Protein Modification with Amine Reagents. Journal of the American Chemical Society. PMID 32915556 DOI: 10.1021/Jacs.0C06820  0.813
2020 Li S, Yang B, Kobayashi T, Yu B, Liu J, Wang L. Genetically encoding thyronine for fluorescent detection of peroxynitrite. Bioorganic & Medicinal Chemistry. 28: 115665. PMID 32828428 DOI: 10.1016/J.Bmc.2020.115665  0.676
2020 Liu J, Ekanayake O, Santoleri D, Walker K, Rozovsky S. Cover Feature: Efficient Generation of Hydrazides in Proteins by RadA Split Intein (ChemBioChem 3/2020) Chembiochem. 21: 281-281. DOI: 10.1002/Cbic.202000013  0.69
2019 Liu J, Yong H, Yao X, Hu H, Yun D, Xiao L. Recent advances in phenolic-protein conjugates: synthesis, characterization, biological activities and potential applications. Rsc Advances. 9: 35825-35840. PMID 35528080 DOI: 10.1039/c9ra07808h  0.316
2019 Liu J, Cai L, Sun W, Cheng R, Wang N, Jin L, Rozovsky S, Seiple I, Wang L. Photocaged Quinone Methide Cross-linkers for Light-controlled Chemical Cross-linking of Protein-protein and Protein-DNA Complexes. Angewandte Chemie (International Ed. in English). PMID 31644827 DOI: 10.1002/Anie.201910135  0.783
2019 Liu J, Ekanayake O, Santoleri D, Walker K, Rozovsky S. Efficient generation of hydrazides in proteins by RadA split intein. Chembiochem : a European Journal of Chemical Biology. PMID 31265209 DOI: 10.1002/Cbic.201900160  0.72
2019 Scinto SL, Ekanayake O, Seneviratne UI, Pigga JE, Brannick SJ, Taylor MT, Liu J, Am Ende CW, Rozovsky S, Fox JM. Dual-Reactivity trans-Cyclooctenol Probes for Sulfenylation in Live Cells Enable Temporal Control via Bioorthogonal Quenching. Journal of the American Chemical Society. PMID 31246462 DOI: 10.1021/Jacs.9B01164  0.723
2019 Liu J, Li S, Aslam NA, Zheng F, Yang B, Cheng R, Wang N, Rozovsky S, Wang PG, Wang Q, Wang L. Genetically Encoding Photocaged Quinone Methide to Multitarget Protein Residues Covalently in Vivo. Journal of the American Chemical Society. PMID 31184146 DOI: 10.1021/Jacs.9B01738  0.818
2019 Cheng R, Grossi M, Liu J, Hoffmann PR, Rozovsky S. A Membrane-Bound Selenoprotein Regulates its Activity by Autoproteolysis Biophysical Journal. 116: 201a. DOI: 10.1016/J.Bpj.2018.11.1111  0.618
2018 Yang B, Wu H, Schnier PD, Liu Y, Liu J, Wang N, DeGrado WF, Wang L. Proximity-enhanced SuFEx chemical cross-linker for specific and multitargeting cross-linking mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. PMID 30322930 DOI: 10.1073/Pnas.1813574115  0.747
2018 Liu J, Cheng R, Wu H, Li S, Wang PG, DeGrado WF, Rozovsky S, Wang L. Building and Breaking Bonds via a Compact S-propargyl-cysteine to Chemically Control Enzymes and Modify Proteins. Angewandte Chemie (International Ed. in English). PMID 30118570 DOI: 10.1002/Anie.201806197  0.756
2018 Liu J, Zheng F, Cheng R, Li S, Rozovsky S, Wang Q, Wang L. Site-Specific Incorporation of Selenocysteine Using an Expanded Genetic Code and Palladium-Mediated Chemical Deprotection. Journal of the American Chemical Society. PMID 29984990 DOI: 10.1021/Jacs.8B04603  0.743
2018 Liu J, Cheng R, Rozovsky S. Synthesis and semisynthesis of selenopeptides and selenoproteins. Current Opinion in Chemical Biology. 46: 41-47. PMID 29723718 DOI: 10.1016/J.Cbpa.2018.04.008  0.74
2018 Wang N, Yang B, Fu C, Zhu H, Zheng F, Kobayashi T, Liu J, Li S, Ma C, Wang PG, Wang Q, Wang L. Genetically encoding fluorosulfate-L-tyrosine to react with lysine, histidine and tyrosine via SuFEx in proteins in vivo. Journal of the American Chemical Society. PMID 29601199 DOI: 10.1021/Jacs.8B01087  0.821
2018 Liu J, Chen Q, Rozovsky S. Selenocysteine-Mediated Expressed Protein Ligation of SELENOM. Methods in Molecular Biology (Clifton, N.J.). 1661: 265-283. PMID 28917051 DOI: 10.1007/978-1-4939-7258-6_19  0.732
2018 Zhang Z, Liu J, Rozovsky S. Preparation of Selenocysteine-Containing Forms of Human SELENOK and SELENOS. Methods in Molecular Biology (Clifton, N.J.). 1661: 241-263. PMID 28917050 DOI: 10.1007/978-1-4939-7258-6_18  0.694
2017 Liu J, Chen Q, Rozovsky S. Utilizing Selenocysteine for Expressed Protein Ligation and Bioconjugations. Journal of the American Chemical Society. PMID 28186733 DOI: 10.1021/Jacs.6B10991  0.742
2016 Block E, Booker S, Flores-Penalba S, George G, Gundala S, Landgraf B, Liu J, Lodge S, Pushie J, Rozovsky S, Vattekkatte A, Yaghi R, Zeng H. Trifluoroselenomethionine - a New Non-Natural Amino Acid. Chembiochem : a European Journal of Chemical Biology. PMID 27383291 DOI: 10.1002/Cbic.201600266  0.699
2015 Li F, Liu J, Rozovsky S. Retraction notice to “Glutathione peroxidase’s reaction intermediate selenenic acid is stabilized by the protein microenvironment” [Free Radic. Biol. Med. 76 (2014) 127–135] Free Radical Biology and Medicine. 87: 385. PMID 26740980 DOI: 10.1016/J.Freeradbiomed.2015.07.014  0.696
2015 Zhang K, Liu J, Charon NW, Li C. A hypothetical protein BB0569 is essential for chemotaxis of the Lyme disease spirochete Borrelia burgdorferi. Journal of Bacteriology. PMID 26644432 DOI: 10.1128/Jb.00877-15  0.322
2015 Liu J, Rozovsky S. Membrane-Bound Selenoproteins. Antioxidants & Redox Signaling. 23: 795-813. PMID 26168272 DOI: 10.1089/Ars.2015.6388  0.651
2014 Zhang X, Heckmann BL, Xie X, Saarinen AM, Liu J. Regulation of FSP27 protein stability by AMPK and HSC70. American Journal of Physiology. Endocrinology and Metabolism. 307: E1047-56. PMID 25315694 DOI: 10.1152/ajpendo.00125.2014  0.334
2014 Li F, Liu J, Rozovsky S. Glutathione peroxidase's reaction intermediate selenenic acid is stabilized by the protein microenvironment. Free Radical Biology & Medicine. 76: 127-35. PMID 25124921 DOI: 10.1016/J.Freeradbiomed.2014.07.041  0.734
2014 Liu J, Zhang Z, Rozovsky S. Selenoprotein K form an intermolecular diselenide bond with unusually high redox potential. Febs Letters. 588: 3311-21. PMID 25117454 DOI: 10.1016/J.Febslet.2014.07.037  0.693
2013 Liu J, Pan S, Hsieh MH, Ng N, Sun F, Wang T, Kasibhatla S, Schuller AG, Li AG, Cheng D, Li J, Tompkins C, Pferdekamper A, Steffy A, Cheng J, et al. Targeting Wnt-driven cancer through the inhibition of Porcupine by LGK974. Proceedings of the National Academy of Sciences of the United States of America. 110: 20224-9. PMID 24277854 DOI: 10.1073/Pnas.1314239110  0.357
2013 Liu J, Rozovsky S. Contribution of selenocysteine to the peroxidase activity of selenoprotein S. Biochemistry. 52: 5514-6. PMID 23914919 DOI: 10.1021/Bi400741C  0.665
2013 Liu J, Zou Y, Guan W, Zhai Y, Xue M, Jin L, Zhao X, Dong J, Wang W, Shen J, Wang PG, Chen M. Biosynthesis of nucleotide sugars by a promiscuous UDP-sugar pyrophosphorylase from Arabidopsis thaliana (AtUSP). Bioorganic & Medicinal Chemistry Letters. 23: 3764-8. PMID 23707255 DOI: 10.1016/J.Bmcl.2013.04.090  0.304
2013 Liu J, Li F, Rozovsky S. The intrinsically disordered membrane protein selenoprotein S is a reductase in vitro. Biochemistry. 52: 3051-61. PMID 23566202 DOI: 10.1021/Bi4001358  0.704
2012 Liu J, Yang H, Lu Q, Wen X, Chen F, Peng L, Zhang L, Lu C. PsbP-domain protein1, a nuclear-encoded thylakoid lumenal protein, is essential for photosystem I assembly in Arabidopsis. The Plant Cell. 24: 4992-5006. PMID 23221595 DOI: 10.1105/tpc.112.106542  0.304
2012 Liu J, Srinivasan P, Pham DN, Rozovsky S. Expression and purification of the membrane enzyme selenoprotein K. Protein Expression and Purification. 86: 27-34. PMID 22963794 DOI: 10.1016/J.Pep.2012.08.014  0.722
2012 Zhang Y, Chen S, Xiao Q, Cao L, Liu J, Rong TY, Ma JF, Wang G, Wang Y, Chen SD. Vacuolar protein sorting 35 Asp620Asn mutation is rare in the ethnic Chinese population with Parkinson's disease. Parkinsonism & Related Disorders. 18: 638-40. PMID 22410496 DOI: 10.1016/j.parkreldis.2012.02.011  0.355
2012 Ali SS, Xia B, Liu J, Navarre WW. Silencing of foreign DNA in bacteria. Current Opinion in Microbiology. 15: 175-81. PMID 22265250 DOI: 10.1016/J.Mib.2011.12.014  0.311
2011 Zhang L, Zhang Y, Dong J, Liu J, Zhang L, Sun H. Design and synthesis of novel photoaffinity probes for study of the target proteins of oleanolic acid. Bioorganic & Medicinal Chemistry Letters. 22: 1036-9. PMID 22204907 DOI: 10.1016/j.bmcl.2011.11.123  0.305
2011 Zhang M, Lin S, Song X, Liu J, Fu Y, Ge X, Fu X, Chang Z, Chen PR. A genetically incorporated crosslinker reveals chaperone cooperation in acid resistance. Nature Chemical Biology. 7: 671-7. PMID 21892184 DOI: 10.1038/Nchembio.644  0.347
2011 Liu J, Johnson K, Li J, Piamonte V, Steffy BM, Hsieh MH, Ng N, Zhang J, Walker JR, Ding S, Muneoka K, Wu X, Glynne R, Schultz PG. Regenerative phenotype in mice with a point mutation in transforming growth factor beta type I receptor (TGFBR1). Proceedings of the National Academy of Sciences of the United States of America. 108: 14560-5. PMID 21841138 DOI: 10.1073/Pnas.1111056108  0.332
2011 Wang Z, Liu J, Chen S, Wang Y, Cao L, Zhang Y, Kang W, Li H, Gui Y, Chen S, Ding J. DJ-1 modulates the expression of Cu/Zn-superoxide dismutase-1 through the Erk1/2-Elk1 pathway in neuroprotection. Annals of Neurology. 70: 591-9. PMID 21796667 DOI: 10.1002/ana.22514  0.305
2010 Liu J, Shi M, Hong Z, Zhang J, Bradner J, Quinn T, Beyer RP, Mcgeer PL, Chen S, Zhang J. Identification of ciliary neurotrophic factor receptor alpha as a mediator of neurotoxicity induced by alpha-synuclein. Proteomics. 10: 2138-50. PMID 20340160 DOI: 10.1002/Pmic.200900745  0.306
2010 Fan J, Liu J, Culty M, Papadopoulos V. Acyl-coenzyme A binding domain containing 3 (ACBD3; PAP7; GCP60): an emerging signaling molecule. Progress in Lipid Research. 49: 218-34. PMID 20043945 DOI: 10.1016/J.Plipres.2009.12.003  0.311
2009 Wikoff WR, Anfora AT, Liu J, Schultz PG, Lesley SA, Peters EC, Siuzdak G. Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites. Proceedings of the National Academy of Sciences of the United States of America. 106: 3698-703. PMID 19234110 DOI: 10.1073/Pnas.0812874106  0.367
2006 Zhang J, Liu JS. On side-chain conformational entropy of proteins. Plos Computational Biology. 2: e168. PMID 17154716 DOI: 10.1371/Journal.Pcbi.0020168  0.301
2005 Liu J, Wu X, Mitchell B, Kintner C, Ding S, Schultz PG. A small-molecule agonist of the Wnt signaling pathway. Angewandte Chemie (International Ed. in English). 44: 1987-90. PMID 15724259 DOI: 10.1002/Anie.200462552  0.309
2005 Liu J, Bang AG, Kintner C, Orth AP, Chanda SK, Ding S, Schultz PG. Identification of the Wnt signaling activator leucine-rich repeat in Flightless interaction protein 2 by a genome-wide functional analysis. Proceedings of the National Academy of Sciences of the United States of America. 102: 1927-32. PMID 15677333 DOI: 10.1073/Pnas.0409472102  0.385
2004 Zheng L, Liu J, Batalov S, Zhou D, Orth A, Ding S, Schultz PG. An approach to genomewide screens of expressed small interfering RNAs in mammalian cells. Proceedings of the National Academy of Sciences of the United States of America. 101: 135-40. PMID 14688408 DOI: 10.1073/Pnas.2136685100  0.343
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