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Francis Valiyaveetil - Publications

Affiliations: 
Physiology and Pharmocology Oregon Health and Science University, Portland, OR 
 2000-2005 Rockefeller University, New York, NY, United States 
Area:
Ion conduction and gating in K+ channels
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34/48 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Ryan MJ, Gao L, Valiyaveetil FI, Kananenka AA, Zanni MT. Water inside the Selectivity Filter of a K Ion Channel: Structural Heterogeneity, Picosecond Dynamics, and Hydrogen Bonding. Journal of the American Chemical Society. PMID 38181505 DOI: 10.1021/jacs.3c11513  0.42
2023 Reddi R, Chatterjee S, Matulef K, Gustafson A, Gao L, Valiyaveetil FI. A facile approach for incorporating tyrosine esters to probe ion binding sites and backbone hydrogen bonds. The Journal of Biological Chemistry. 105517. PMID 38042487 DOI: 10.1016/j.jbc.2023.105517  0.346
2023 Ryan MJ, Gao L, Valiyaveetil FI, Kananenka AA, Zanni MT. Water inside the selectivity filter of a K ion channel: structural heterogeneity, picosecond dynamics, and hydrogen-bonding. Biorxiv : the Preprint Server For Biology. PMID 38014355 DOI: 10.1101/2023.11.16.567415  0.42
2023 Ryan MJ, Gao L, Valiyaveetil FI, Zanni MT, Kananenka AA. Probing Ion Configurations in the KcsA Selectivity Filter with Single-Isotope Labels and 2D IR Spectroscopy. Journal of the American Chemical Society. 145: 18529-18537. PMID 37578394 DOI: 10.1021/jacs.3c05339  0.513
2022 Reddi R, Matulef K, Riederer EA, Whorton MR, Valiyaveetil FI. Structural basis for C-type inactivation in a Shaker family voltage-gated K channel. Science Advances. 8: eabm8804. PMID 35452285 DOI: 10.1126/sciadv.abm8804  0.612
2021 Reddi R, Matulef K, Riederer E, Moenne-Loccoz P, Valiyaveetil FI. Structural Snapshots of Intermediates in the Gating of a K Channel. Journal of Molecular Biology. 167296. PMID 34627789 DOI: 10.1016/j.jmb.2021.167296  0.628
2019 McDonald SK, Levitz TS, Valiyaveetil FI. A shared mechanism for the folding of voltage gated K+ channels. Biochemistry. PMID 30793887 DOI: 10.1021/acs.biochem.9b00068  0.531
2018 Infield DT, Matulef K, Galpin JD, Lam K, Tajkhorshid E, Ahern CA, Valiyaveetil FI. Main-chain mutagenesis reveals intrahelical coupling in an ion channel voltage-sensor. Nature Communications. 9: 5055. PMID 30498243 DOI: 10.1038/S41467-018-07477-3  0.339
2018 Matulef K, Valiyaveetil FI. Patch-Clamp Recordings of the KcsA K(+) Channel in Unilamellar Blisters. Methods in Molecular Biology (Clifton, N.J.). 1684: 181-191. PMID 29058192 DOI: 10.1007/978-1-4939-7362-0_14  0.571
2018 Infield DT, Matulef K, Galpin JD, Ahern CA, Valiyaveetil FI. The Role of Backbone Hydrogen Bonds in the Voltage Sensor of K+ Channels Biophysical Journal. 114: 477a. DOI: 10.1016/J.Bpj.2017.11.2622  0.366
2017 Valiyaveetil FI. A glimpse into the C-type-inactivated state for a Potassium Channel. Nature Structural & Molecular Biology. 24: 787-788. PMID 28981075 DOI: 10.1038/nsmb.3480  0.393
2017 Kratochvil HT, Maj M, Matulef K, Annen AW, Ostmeyer J, Perozo E, Roux B, Valiyaveetil FI, Zanni MT. Probing the effects of gating on the ion occupancy of the K(+) channel selectivity filter using 2D IR spectroscopy. Journal of the American Chemical Society. PMID 28472884 DOI: 10.1021/Jacs.7B01594  0.606
2016 Kratochvil HT, Carr JK, Matulef K, Annen AW, Li H, Maj M, Ostmeyer J, Serrano AL, Raghuraman H, Moran SD, Skinner JL, Perozo E, Roux B, Valiyaveetil FI, Zanni MT. Instantaneous ion configurations in the K+ ion channel selectivity filter revealed by 2D IR spectroscopy. Science (New York, N.Y.). 353: 1040-1044. PMID 27701114 DOI: 10.1126/Science.Aag1447  0.578
2016 Matulef K, Annen AW, Nix JC, Valiyaveetil FI. Individual Ion Binding Sites in the K(+) Channel Play Distinct Roles in C-type Inactivation and in Recovery from Inactivation. Structure (London, England : 1993). 24: 750-61. PMID 27150040 DOI: 10.1016/j.str.2016.02.021  0.547
2016 Matulef K, Valiyaveetil F. The Role of Ion Binding Sites in C-Type Inactivation of A K Channel Biophysical Journal. 110: 282a. DOI: 10.1016/J.Bpj.2015.11.1528  0.609
2015 Liu S, Focke PJ, Matulef K, Bian X, Moënne-Loccoz P, Valiyaveetil FI, Lockless SW. Ion-binding properties of a K+ channel selectivity filter in different conformations. Proceedings of the National Academy of Sciences of the United States of America. PMID 26598654 DOI: 10.1073/Pnas.1510526112  0.597
2014 Matulef K, Komarov AG, Valiyaveetil FI. Protein Backbone Mutagenesis Reveals a Novel Link between Ion Occupancy and C-type Inactivation in K+ Channels Biophysical Journal. 106: 233a-234a. DOI: 10.1016/j.bpj.2013.11.1368  0.554
2013 Matulef K, Komarov AG, Costantino CA, Valiyaveetil FI. Using protein backbone mutagenesis to dissect the link between ion occupancy and C-type inactivation in K+ channels. Proceedings of the National Academy of Sciences of the United States of America. 110: 17886-91. PMID 24128761 DOI: 10.1073/pnas.1314356110  0.569
2013 Devaraneni PK, Komarov AG, Costantino CA, Devereaux JJ, Matulef K, Valiyaveetil FI. Semisynthetic K+ channels show that the constricted conformation of the selectivity filter is not the C-type inactivated state. Proceedings of the National Academy of Sciences of the United States of America. 110: 15698-703. PMID 24019483 DOI: 10.1073/pnas.1308699110  0.622
2013 Komarov AG, Costantino CA, Valiyaveetil FI. Engineering K+ channels using semisynthesis. Methods in Molecular Biology (Clifton, N.J.). 995: 3-17. PMID 23494368 DOI: 10.1007/978-1-62703-345-9_1  0.653
2012 Valiyaveetil F, Komarov A, Devaraneni P. Testing Models for the Slow Inactivated State using Unnatural Amino Acid Mutagenesis Biophysical Journal. 102: 530a. DOI: 10.1016/J.Bpj.2011.11.2895  0.645
2011 Devaraneni PK, Devereaux JJ, Valiyaveetil FI. In vitro folding of KvAP, a voltage-gated K+ channel. Biochemistry. 50: 10442-50. PMID 22044112 DOI: 10.1021/bi2012965  0.524
2010 Focke PJ, Valiyaveetil FI. Studies of ion channels using expressed protein ligation. Current Opinion in Chemical Biology. 14: 797-802. PMID 20965773 DOI: 10.1016/j.cbpa.2010.09.014  0.436
2010 Linn KM, Derebe MG, Jiang Y, Valiyaveetil FI. Semisynthesis of NaK, a Na(+) and K(+) conducting ion channel. Biochemistry. 49: 4450-6. PMID 20415433 DOI: 10.1021/Bi100413Z  0.532
2010 Valiyaveetil F. Investigating Ion Channels using Chemical Synthesis Biophysical Journal. 98: 331a. DOI: 10.1016/j.bpj.2009.12.1798  0.466
2009 Komarov AG, Linn KM, Devereaux JJ, Valiyaveetil FI. Modular strategy for the semisynthesis of a K+ channel: investigating interactions of the pore helix. Acs Chemical Biology. 4: 1029-38. PMID 19803500 DOI: 10.1021/cb900210r  0.507
2009 Komarov AG, Linn KM, Devereaux JJ, Valiyaveetil FI. Semisynthesis of K+ channels. Methods in Enzymology. 462: 135-50. PMID 19632473 DOI: 10.1016/S0076-6879(09)62007-3  0.668
2009 Valiyaveetil F. Towards The Chemical Synthesis Of A Voltage Gated K+ Channel Biophysical Journal. 96: 369a. DOI: 10.1016/j.bpj.2008.12.1989  0.529
2006 Valiyaveetil FI, Leonetti M, Muir TW, Mackinnon R. Ion selectivity in a semisynthetic K+ channel locked in the conductive conformation. Science (New York, N.Y.). 314: 1004-7. PMID 17095703 DOI: 10.1126/Science.1133415  0.675
2006 Valiyaveetil FI, Sekedat M, MacKinnon R, Muir TW. Structural and functional consequences of an amide-to-ester substitution in the selectivity filter of a potassium channel. Journal of the American Chemical Society. 128: 11591-9. PMID 16939283 DOI: 10.1021/Ja0631955  0.647
2004 Valiyaveetil FI, Sekedat M, Mackinnon R, Muir TW. Glycine as a D-amino acid surrogate in the K(+)-selectivity filter. Proceedings of the National Academy of Sciences of the United States of America. 101: 17045-9. PMID 15563591 DOI: 10.1073/Pnas.0407820101  0.573
2004 Valiyaveetil FI, Sekedat M, Muir TW, MacKinnon R. Semisynthesis of a functional K+ channel. Angewandte Chemie (International Ed. in English). 43: 2504-7. PMID 15127436 DOI: 10.1002/Anie.200453849  0.626
2002 Valiyaveetil FI, Zhou Y, MacKinnon R. Lipids in the structure, folding, and function of the KcsA K+ channel. Biochemistry. 41: 10771-7. PMID 12196015 DOI: 10.1021/bi026215y  0.425
2002 Valiyaveetil FI, MacKinnon R, Muir TW. Semisynthesis and folding of the potassium channel KcsA. Journal of the American Chemical Society. 124: 9113-20. PMID 12149015 DOI: 10.1021/Ja0266722  0.45
Low-probability matches (unlikely to be authored by this person)
2015 Leisle L, Valiyaveetil F, Mehl RA, Ahern CA. Incorporation of Non-Canonical Amino Acids. Advances in Experimental Medicine and Biology. 869: 119-51. PMID 26381943 DOI: 10.1007/978-1-4939-2845-3_7  0.297
2016 Focke PJ, Hein C, Hoffmann B, Matulef K, Bernhard F, Dötsch V, Valiyaveetil FI. Combining In vitro Folding with Cell-Free Protein Synthesis for Membrane Protein Expression. Biochemistry. PMID 27384110 DOI: 10.1021/Acs.Biochem.6B00488  0.28
2019 Riederer E, Valiyaveetil F. Investigation of Extracellular Gate Movement in a Glutamate Homologue Biophysical Journal. 116: 50a. DOI: 10.1016/J.Bpj.2018.11.314  0.237
2018 Riederer EA, Focke PJ, Georgieva ER, Akyuz N, Matulef K, Borbat PP, Freed JH, Blanchard SC, Boudker O, Valiyaveetil FI. A facile approach for the i assembly of multimeric membrane transport proteins. Elife. 7. PMID 29889023 DOI: 10.7554/Elife.36478  0.198
2015 Focke PJ, Annen AW, Valiyaveetil FI. Engineering the glutamate transporter homologue GltPh using protein semisynthesis. Biochemistry. 54: 1694-702. PMID 25649707 DOI: 10.1021/bi501477y  0.186
2019 Riederer EA, Valiyaveetil FI. Investigation of the allosteric coupling mechanism in a glutamate transporter homolog via unnatural amino acid mutagenesis. Proceedings of the National Academy of Sciences of the United States of America. 116: 15939-15946. PMID 31332002 DOI: 10.1073/pnas.1907852116  0.159
2022 Riederer EA, Moënne-Loccoz P, Valiyaveetil FI. Distinct roles of the Na binding sites in the allosteric coupling mechanism of the glutamate transporter homolog, Glt. Proceedings of the National Academy of Sciences of the United States of America. 119: e2121653119. PMID 35507872 DOI: 10.1073/pnas.2121653119  0.15
1998 Valiyaveetil FI, Fillingame RH. Transmembrane topography of subunit a in the Escherichia coli F1F0 ATP synthase. The Journal of Biological Chemistry. 273: 16241-7. PMID 9632683 DOI: 10.1074/Jbc.273.26.16241  0.146
1997 Valiyaveetil FI, Fillingame RH. On the role of Arg-210 and Glu-219 of subunit a in proton translocation by the Escherichia coli F0F1-ATP synthase. The Journal of Biological Chemistry. 272: 32635-41. PMID 9405480 DOI: 10.1074/Jbc.272.51.32635  0.135
1998 Fillingame RH, Jones PC, Jiang W, Valiyaveetil FI, Dmitriev OY. Subunit organization and structure in the F0 sector of Escherichia coli F1F0 ATP synthase. Biochimica Et Biophysica Acta. 1365: 135-42. PMID 9693732 DOI: 10.1016/S0005-2728(98)00053-X  0.129
2014 Focke PJ, Annen AW, Valiyaveetil FI. Investigating the Bacterial Glutamate Transporter Homolog GltPh with Unnatural Amino Acids Biophysical Journal. 106: 229a. DOI: 10.1016/j.bpj.2013.11.1338  0.099
2002 Valiyaveetil F, Hermolin J, Fillingame RH. pH dependent inactivation of solubilized F1F0 ATP synthase by dicyclohexylcarbodiimide: pK(a) of detergent unmasked aspartyl-61 in Escherichia coli subunit c. Biochimica Et Biophysica Acta. 1553: 296-301. PMID 11997138 DOI: 10.1016/S0005-2728(01)00251-1  0.096
1998 Fillingame RH, Girvin ME, Jiang W, Valiyaveetil F, Hermolin J. Subunit interactions coupling H+ transport and ATP synthesis in F1F0 ATP synthase. Acta Physiologica Scandinavica. Supplementum. 643: 163-8. PMID 9789557  0.074
2012 Focke PJ, Valiyaveetil FI. Building a Transporter: Toward the Chemical Semisynthesis of Integral Membrane Protein Transporters Biophysical Journal. 102: 520a. DOI: 10.1016/j.bpj.2011.11.2842  0.066
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