| Year |
Citation |
Score |
| 2025 |
Pánek T, Tice AK, Corre P, Hrubá P, Žihala D, Kamikawa R, Yazaki E, Shiratori T, Kume K, Hashimoto T, Ishida KI, Hradilová M, Silberman JD, Roger A, Inagaki Y, et al. An expanded phylogenomic analysis of Heterolobosea reveals the deep relationships, non-canonical genetic codes, and cryptic flagellate stages in the group. Molecular Phylogenetics and Evolution. 108289. PMID 39826589 DOI: 10.1016/j.ympev.2025.108289 |
0.378 |
|
| 2024 |
Eglit Y, Shiratori T, Jerlström-Hultqvist J, Williamson K, Roger AJ, Ishida KI, Simpson AGB. Meteora sporadica, a protist with incredible cell architecture, is related to Hemimastigophora. Current Biology : Cb. 34: 451-459.e6. PMID 38262350 DOI: 10.1016/j.cub.2023.12.032 |
0.409 |
|
| 2023 |
Blaz J, Galindo LJ, Heiss AA, Kaur H, Torruella G, Yang A, Alexa Thompson L, Filbert A, Warring S, Narechania A, Shiratori T, Ishida KI, Dacks JB, López-García P, Moreira D, et al. One high quality genome and two transcriptome datasets for new species of Mantamonas, a deep-branching eukaryote clade. Scientific Data. 10: 603. PMID 37689692 DOI: 10.1038/s41597-023-02488-2 |
0.785 |
|
| 2023 |
Yubuki N, Torruella G, Galindo LJ, Heiss AA, Ciobanu MC, Shiratori T, Ishida KI, Blaz J, Kim E, Moreira D, López-García P, Eme L. Molecular and morphological characterization of four new ancyromonad genera and proposal for an updated taxonomy of the Ancyromonadida. The Journal of Eukaryotic Microbiology. e12997. PMID 37606230 DOI: 10.1111/jeu.12997 |
0.778 |
|
| 2021 |
Suzuki S, Kawachi M, Tsukakoshi C, Nakamura A, Hagino K, Inouye I, Ishida KI. Unstable Relationship Between (= ) and Its Nitrogen-Fixing Endosymbiont. Frontiers in Plant Science. 12: 749895. PMID 34925404 DOI: 10.3389/fpls.2021.749895 |
0.323 |
|
| 2020 |
Yazaki E, Kume K, Shiratori T, Eglit Y, Tanifuji G, Harada R, Simpson AGB, Ishida KI, Hashimoto T, Inagaki Y. Barthelonids represent a deep-branching metamonad clade with mitochondrion-related organelles predicted to generate no ATP. Proceedings. Biological Sciences. 287: 20201538. PMID 32873198 DOI: 10.1098/Rspb.2020.1538 |
0.351 |
|
| 2020 |
Shiratori T, Yabuki A, Ishida KI. Morphology, Ultrastructure, and Phylogeny of Two Novel Species of Ventrifissura (V. oblonga n. sp. and V. velata n. sp., Thecofilosea, Cercozoa). Protist. 171: 125731. PMID 32464531 DOI: 10.1016/J.Protis.2020.125731 |
0.361 |
|
| 2020 |
Sarai C, Tanifuji G, Nakayama T, Kamikawa R, Takahashi K, Yazaki E, Matsuo E, Miyashita H, Ishida KI, Iwataki M, Inagaki Y. Dinoflagellates with relic endosymbiont nuclei as models for elucidating organellogenesis. Proceedings of the National Academy of Sciences of the United States of America. 117: 5364-5375. PMID 32094181 DOI: 10.1073/Pnas.1911884117 |
0.39 |
|
| 2020 |
Nishimura Y, Kume K, Sonehara K, Tanifuji G, Shiratori T, Ishida K, Hashimoto T, Inagaki Y, Ohkuma M. Mitochondrial Genomes of Hemiarma marina and Leucocryptos marina Revised the Evolution of Cytochrome c Maturation in Cryptista Frontiers in Ecology and Evolution. 8. DOI: 10.3389/Fevo.2020.00140 |
0.465 |
|
| 2019 |
Shiratori T, Suzuki S, Kakizawa Y, Ishida KI. Phagocytosis-like cell engulfment by a planctomycete bacterium. Nature Communications. 10: 5529. PMID 31827088 DOI: 10.1038/S41467-019-13499-2 |
0.475 |
|
| 2019 |
Thakur R, Shiratori T, Ishida KI. Taxon-rich Multigene Phylogenetic Analyses Resolve the Phylogenetic Relationship Among Deep-branching Stramenopiles. Protist. 170: 125682. PMID 31568885 DOI: 10.1016/J.Protis.2019.125682 |
0.496 |
|
| 2019 |
Nishimura Y, Shiratori T, Ishida KI, Hashimoto T, Ohkuma M, Inagaki Y. Horizontally-acquired genetic elements in the mitochondrial genome of a centrohelid Marophrys sp. SRT127. Scientific Reports. 9: 4850. PMID 30890720 DOI: 10.1038/S41598-019-41238-6 |
0.415 |
|
| 2018 |
Sakamoto H, Hirakawa Y, Ishida KI, Keeling PJ, Kita K, Matsuzaki M. Puromycin selection for stable transfectants of the oyster-infecting parasite Perkinsus marinus. Parasitology International. PMID 30389616 DOI: 10.1016/J.Parint.2018.10.011 |
0.616 |
|
| 2018 |
Matsuo M, Katahata A, Satoh S, Matsuzaki M, Nomura M, Ishida KI, Inagaki Y, Obokata J. Characterization of spliced leader trans-splicing in a photosynthetic rhizarian amoeba, Paulinella micropora, and its possible role in functional gene transfer. Plos One. 13: e0200961. PMID 30024971 DOI: 10.1371/Journal.Pone.0200961 |
0.47 |
|
| 2018 |
Tashyreva D, Prokopchuk G, Yabuki A, Kaur B, Faktorová D, Votýpka J, Kusaka C, Fujikura K, Shiratori T, Ishida KI, Horák A, Lukeš J. Phylogeny and Morphology of New Diplonemids from Japan. Protist. 169: 158-179. PMID 29604574 DOI: 10.1016/J.Protis.2018.02.001 |
0.377 |
|
| 2018 |
Brown MW, Heiss AA, Kamikawa R, Inagaki Y, Yabuki A, Tice AK, Shiratori T, Ishida KI, Hashimoto T, Simpson AGB, Roger AJ. Phylogenomics places orphan protistan lineages in a novel eukaryotic super-group. Genome Biology and Evolution. PMID 29360967 DOI: 10.1093/Gbe/Evy014 |
0.779 |
|
| 2018 |
Yabuki A, Ishida KI. An Orphan Protist Quadricilia rotundata Finally Finds Its Phylogenetic Home in Cercozoa. The Journal of Eukaryotic Microbiology. PMID 29345018 DOI: 10.1111/Jeu.12502 |
0.361 |
|
| 2017 |
Shiratori T, Thakur R, Ishida KI. Pseudophyllomitus vesiculosus (Larsen and Patterson 1990) Lee, 2002, a Poorly Studied Phagotrophic Biflagellate is the First Characterized Member of Stramenopile Environmental Clade MAST-6. Protist. 168: 439-451. PMID 28822908 DOI: 10.1016/J.Protis.2017.06.004 |
0.403 |
|
| 2017 |
Shiratori T, Fujita S, Shimizu T, Nakayama T, Ishida KI. Viridiuvalis adhaerens gen. et sp. nov., a novel colony-forming chlorarachniophyte. Journal of Plant Research. PMID 28642986 DOI: 10.1007/S10265-017-0961-1 |
0.412 |
|
| 2017 |
Kamikawa R, Moog D, Zauner S, Tanifuji G, Ishida KI, Miyashita H, Mayama S, Hashimoto T, Maier UG, Archibald JM, Inagaki Y. A non-photosynthetic diatom reveals early steps of reductive evolution in plastids. Molecular Biology and Evolution. PMID 28549159 DOI: 10.1093/Molbev/Msx172 |
0.622 |
|
| 2017 |
Hirakawa Y, Nakayama T, Keilert N, Ishida K. Evolution of UhpC-type hexose-phosphate transporters in dinoflagellates Phycological Research. 65: 166-170. DOI: 10.1111/Pre.12164 |
0.365 |
|
| 2016 |
Suzuki S, Ishida KI, Hirakawa Y. Diurnal transcriptional regulation of endosymbiotically derived genes in the chlorarachniophyte Bigelowiella natans. Genome Biology and Evolution. PMID 27503292 DOI: 10.1093/Gbe/Evw188 |
0.468 |
|
| 2016 |
Shiratori T, Ishida KI. A New Heterotrophic Cryptomonad: Hemiarma marina n. g., n. sp. The Journal of Eukaryotic Microbiology. PMID 27218475 DOI: 10.1111/Jeu.12327 |
0.394 |
|
| 2016 |
Shiratori T, Ishida KI. Trachyrhizium urniformis n. g., n. sp., a Novel Marine Filose Thecate Amoeba Related to a Cercozoan Environmental Clade (Novel Clade 4). The Journal of Eukaryotic Microbiology. PMID 27061962 DOI: 10.1111/Jeu.12319 |
0.378 |
|
| 2016 |
Suzuki S, Hirakawa Y, Kofuji R, Sugita M, Ishida KI. Plastid genome sequences of Gymnochlora stellata, Lotharella vacuolata, and Partenskyella glossopodia reveal remarkable structural conservation among chlorarachniophyte species. Journal of Plant Research. PMID 26920842 DOI: 10.1007/S10265-016-0804-5 |
0.461 |
|
| 2016 |
Kamikawa R, Shiratori T, Ishida K, Miyashita H, Roger AJ. Group II Intron-Mediated Trans-Splicing in the Gene-Rich Mitochondrial Genome of an Enigmatic Eukaryote, Diphylleia rotans. Genome Biology and Evolution. 8: 458-66. PMID 26833505 DOI: 10.1093/Gbe/Evw011 |
0.447 |
|
| 2015 |
Kamikawa R, Tanifuji G, Ishikawa SA, Ishii KI, Matsuno Y, Onodera NT, Ishida KI, Hashimoto T, Miyashita H, Mayama S, Inagaki Y. Proposal of a Twin Aarginine Translocator System-Mediated Constraint against Loss of ATP Synthase Genes from Nonphotosynthetic Plastid Genomes. Molecular Biology and Evolution. PMID 26576845 DOI: 10.1093/Molbev/Msv247 |
0.446 |
|
| 2015 |
Hirakawa Y, Ishida K. Prospective function of FtsZ proteins in the secondary plastid of chlorarachniophyte algae. Bmc Plant Biology. 15: 276. PMID 26556725 DOI: 10.1186/S12870-015-0662-7 |
0.419 |
|
| 2015 |
Shiratori T, Ishida KI. Entamoeba marina n. sp.; a New Species of Entamoeba Isolated From Tidal Flat Sediment of Iriomote Island, Okinawa, Japan. The Journal of Eukaryotic Microbiology. PMID 26452446 DOI: 10.1111/Jeu.12276 |
0.375 |
|
| 2015 |
Shiratori T, Nakayama T, Ishida K. A New Deep-branching Stramenopile, Platysulcus tardus gen. nov., sp. nov. Protist. 166: 337-48. PMID 26070192 DOI: 10.1016/J.Protis.2015.05.001 |
0.419 |
|
| 2015 |
Kamikawa R, Tanifuji G, Ishikawa SA, Ishii KI, Matsuno Y, Onodera NT, Ishida KI, Hashimoto T, Miyashita H, Mayama S, Inagaki Y. Proposal of a Twin Aarginine Translocator System-Mediated Constraint against Loss of ATP Synthase Genes from Nonphotosynthetic Plastid Genomes. Molecular Biology and Evolution. PMID 26048548 DOI: 10.1093/molbev/msv134 |
0.339 |
|
| 2015 |
Suzuki S, Shirato S, Hirakawa Y, Ishida K. Nucleomorph Genome Sequences of Two Chlorarachniophytes, Amorphochlora amoebiformis and Lotharella vacuolata. Genome Biology and Evolution. 7: 1533-45. PMID 26002880 DOI: 10.1093/Gbe/Evv096 |
0.481 |
|
| 2015 |
Heiss AA, Lee WJ, Ishida KI, Simpson AG. Cultivation and Characterisation of New Species of Apusomonads (the Sister Group to Opisthokonts), Including Close Relatives of Thecamonas (Chelonemonas n. gen.). The Journal of Eukaryotic Microbiology. PMID 25912654 DOI: 10.1111/Jeu.12220 |
0.764 |
|
| 2015 |
Nakayama T, Nakamura A, Yokoyama A, Shiratori T, Inouye I, Ishida K. Taxonomic study of a new eustigmatophycean alga, Vacuoliviride crystalliferum gen. et sp. nov. Journal of Plant Research. 128: 249-57. PMID 25516501 DOI: 10.1007/S10265-014-0686-3 |
0.429 |
|
| 2015 |
Kamikawa R, Yubuki N, Yoshida M, Taira M, Nakamura N, Ishida Ki, Leander BS, Miyashita H, Hashimoto T, Mayama S, Inagaki Y. Multiple losses of photosynthesis in Nitzschia (Bacillariophyceae) Phycological Research. 63: 19-28. DOI: 10.1111/Pre.12072 |
0.65 |
|
| 2014 |
Shiratori T, Yokoyama A, Ishida K. Phylogeny, ultrastructure, and flagellar apparatus of a new Marimonad flagellate Abollifer globosa sp. nov. (Imbricatea, Cercozoa). Protist. 165: 808-24. PMID 25460232 DOI: 10.1016/J.Protis.2014.10.003 |
0.419 |
|
| 2014 |
Yabuki A, Kamikawa R, Ishikawa SA, Kolisko M, Kim E, Tanabe AS, Kume K, Ishida K, Inagki Y. Palpitomonas bilix represents a basal cryptist lineage: insight into the character evolution in Cryptista. Scientific Reports. 4: 4641. PMID 24717814 DOI: 10.1038/Srep04641 |
0.743 |
|
| 2014 |
Hirakawa Y, Ishida K. Polyploidy of endosymbiotically derived genomes in complex algae. Genome Biology and Evolution. 6: 974-80. PMID 24709562 DOI: 10.1093/Gbe/Evu071 |
0.399 |
|
| 2014 |
Hirakawa Y, Suzuki S, Archibald JM, Keeling PJ, Ishida K. Overexpression of molecular chaperone genes in nucleomorph genomes. Molecular Biology and Evolution. 31: 1437-43. PMID 24603278 DOI: 10.1093/Molbev/Msu092 |
0.75 |
|
| 2014 |
Kamikawa R, Kolisko M, Nishimura Y, Yabuki A, Brown MW, Ishikawa SA, Ishida K, Roger AJ, Hashimoto T, Inagaki Y. Gene content evolution in Discobid mitochondria deduced from the phylogenetic position and complete mitochondrial genome of Tsukubamonas globosa. Genome Biology and Evolution. 6: 306-15. PMID 24448982 DOI: 10.1093/Gbe/Evu015 |
0.727 |
|
| 2013 |
Yabuki A, Ishida K, Cavalier-Smith T. Rigifila ramosa n. gen., n. sp., a filose apusozoan with a distinctive pellicle, is related to Micronuclearia. Protist. 164: 75-88. PMID 22682062 DOI: 10.1016/J.Protis.2012.04.005 |
0.395 |
|
| 2012 |
Nakayama T, Ishida K, Archibald JM. Broad distribution of TPI-GAPDH fusion proteins among eukaryotes: evidence for glycolytic reactions in the mitochondrion? Plos One. 7: e52340. PMID 23284996 DOI: 10.1371/Journal.Pone.0052340 |
0.625 |
|
| 2012 |
Curtis BA, Tanifuji G, Burki F, Gruber A, Irimia M, Maruyama S, Arias MC, Ball SG, Gile GH, Hirakawa Y, Hopkins JF, Kuo A, Rensing SA, Schmutz J, Symeonidi A, ... ... Ishida K, et al. Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs. Nature. 492: 59-65. PMID 23201678 DOI: 10.1038/Nature11681 |
0.774 |
|
| 2012 |
Shiratori T, Yabuki A, Ishida K. Esquamula lacrimiformis n. g., n. sp., a new member of thaumatomonads that lacks siliceous scales. The Journal of Eukaryotic Microbiology. 59: 527-36. PMID 22742560 DOI: 10.1111/J.1550-7408.2012.00635.X |
0.37 |
|
| 2012 |
Yabuki A, Chao EE, Ishida K, Cavalier-Smith T. Microheliella maris (Microhelida ord. n.), an ultrastructurally highly distinctive new axopodial protist species and genus, and the unity of phylum Heliozoa. Protist. 163: 356-88. PMID 22153838 DOI: 10.1016/J.Protis.2011.10.001 |
0.473 |
|
| 2012 |
Arima H, Horiguchi N, Takaichi S, Kofuji R, Ishida K, Wada K, Sakamoto T. Molecular genetic and chemotaxonomic characterization of the terrestrial cyanobacterium Nostoc commune and its neighboring species. Fems Microbiology Ecology. 79: 34-45. PMID 22066798 DOI: 10.1111/J.1574-6941.2011.01195.X |
0.429 |
|
| 2011 |
Yabuki A, Nakayama T, Yubuki N, Hashimoto T, Ishida K, Inagaki Y. Tsukubamonas globosa n. gen., n. sp., a novel excavate flagellate possibly holding a key for the early evolution in "Discoba". The Journal of Eukaryotic Microbiology. 58: 319-31. PMID 21569159 DOI: 10.1111/J.1550-7408.2011.00552.X |
0.307 |
|
| 2011 |
Yabuki A, Ishida K. Mataza hastifera n. g., n. sp.: a possible new lineage in the Thecofilosea (Cercozoa). The Journal of Eukaryotic Microbiology. 58: 94-102. PMID 21205061 DOI: 10.1111/J.1550-7408.2010.00524.X |
0.336 |
|
| 2011 |
Kamikawa R, Yabuki A, Nakayama T, Ishida K, Hashimoto T, Inagaki Y. Cercozoa comprises both EF-1α-containing and EFL-containing members. European Journal of Protistology. 47: 24-8. PMID 21071191 DOI: 10.1016/J.Ejop.2010.08.002 |
0.39 |
|
| 2011 |
Nakayama T, Ikegami Y, Nakayama T, Ishida K, Inagaki Y, Inouye I. Spheroid bodies in rhopalodiacean diatoms were derived from a single endosymbiotic cyanobacterium. Journal of Plant Research. 124: 93-7. PMID 20512519 DOI: 10.1007/S10265-010-0355-0 |
0.385 |
|
| 2011 |
Ota S, Kudo A, Ishida K. Gymnochlora dimorpha sp. nov., a chlorarachniophyte with unique daughter cell behaviour Phycologia. 50: 317-326. DOI: 10.2216/09-102.1 |
0.323 |
|
| 2011 |
Ishida K, Endo H, Koike S. Partenskyella glossopodia (Chlorarachniophyceae) possesses a nucleomorph genome of approximately 1 Mbp Phycological Research. 59: 120-122. DOI: 10.1111/J.1440-1835.2011.00608.X |
0.345 |
|
| 2010 |
Yabuki A, Inagaki Y, Ishida K. Palpitomonas bilix gen. et sp. nov.: A novel deep-branching heterotroph possibly related to Archaeplastida or Hacrobia. Protist. 161: 523-38. PMID 20418156 DOI: 10.1016/J.Protis.2010.03.001 |
0.425 |
|
| 2010 |
Hirakawa Y, Gile GH, Ota S, Keeling PJ, Ishida K. Characterization of periplastidal compartment-targeting signals in chlorarachniophytes. Molecular Biology and Evolution. 27: 1538-45. PMID 20133351 DOI: 10.1093/Molbev/Msq038 |
0.756 |
|
| 2010 |
Reyes-Prieto A, Yoon HS, Moustafa A, Yang EC, Andersen RA, Boo SM, Nakayama T, Ishida K, Bhattacharya D. Differential gene retention in plastids of common recent origin. Molecular Biology and Evolution. 27: 1530-7. PMID 20123796 DOI: 10.1093/Molbev/Msq032 |
0.523 |
|
| 2010 |
Ishida K, Yabuki A, Ota S. Research note: Amorphochlora amoebiformis gen. et comb. nov. (Chlorarachniophyceae) Phycological Research. 59: 52-53. DOI: 10.1111/J.1440-1835.2010.00597.X |
0.372 |
|
| 2009 |
Hirakawa Y, Nagamune K, Ishida K. Protein targeting into secondary plastids of chlorarachniophytes. Proceedings of the National Academy of Sciences of the United States of America. 106: 12820-5. PMID 19620731 DOI: 10.1073/Pnas.0902578106 |
0.352 |
|
| 2009 |
Yoon HS, Nakayama T, Reyes-Prieto A, Andersen RA, Boo SM, Ishida K, Bhattacharya D. A single origin of the photosynthetic organelle in different Paulinella lineages. Bmc Evolutionary Biology. 9: 98. PMID 19439085 DOI: 10.1186/1471-2148-9-98 |
0.371 |
|
| 2009 |
Nakayama T, Ishida K. Another acquisition of a primary photosynthetic organelle is underway in Paulinella chromatophora. Current Biology : Cb. 19: R284-5. PMID 19368869 DOI: 10.1016/J.Cub.2009.02.043 |
0.486 |
|
| 2009 |
Ota S, Vaulot D, Le Gall F, Yabuki A, Ishida K. Partenskyella glossopodia gen. et sp. nov., the first report of a Chlorarachniophyte that lacks a pyrenoid. Protist. 160: 137-50. PMID 19013103 DOI: 10.1016/J.Protis.2008.09.003 |
0.343 |
|
| 2009 |
Bass D, Chao EE, Nikolaev S, Yabuki A, Ishida K, Berney C, Pakzad U, Wylezich C, Cavalier-Smith T. Phylogeny of novel naked Filose and Reticulose Cercozoa: Granofilosea cl. n. and Proteomyxidea revised. Protist. 160: 75-109. PMID 18952499 DOI: 10.1016/J.Protis.2008.07.002 |
0.329 |
|
| 2009 |
Ota S, Silver TD, Archibald JM, Ishida KI. Lotharella oceanica sp. nov. - A new planktonic chlorarachniophyte studied by light and electron microscopy Phycologia. 48: 315-323. DOI: 10.2216/09-02.1 |
0.603 |
|
| 2008 |
Hirakawa Y, Kofuji R, Ishida K. TRANSIENT TRANSFORMATION OF A CHLORARACHNIOPHYTE ALGA, LOTHARELLA AMOEBIFORMIS (CHLORARACHNIOPHYCEAE), WITH uidA AND egfp REPORTER GENES(1). Journal of Phycology. 44: 814-20. PMID 27041439 DOI: 10.1111/J.1529-8817.2008.00513.X |
0.347 |
|
| 2008 |
Takishita K, Kawachi M, Noël MH, Matsumoto T, Kakizoe N, Watanabe MM, Inouye I, Ishida K, Hashimoto T, Inagaki Y. Origins of plastids and glyceraldehyde-3-phosphate dehydrogenase genes in the green-colored dinoflagellate Lepidodinium chlorophorum. Gene. 410: 26-36. PMID 18191504 DOI: 10.1016/J.Gene.2007.11.008 |
0.483 |
|
| 2007 |
Silver TD, Koike S, Yabuki A, Kofuji R, Archibald JM, Ishida K. Phylogeny and nucleomorph karyotype diversity of chlorarachniophyte algae. The Journal of Eukaryotic Microbiology. 54: 403-10. PMID 17910684 DOI: 10.1111/J.1550-7408.2007.00279.X |
0.64 |
|
| 2007 |
Ota S, Ueda K, Ishida K. Norrisiella sphaerica gen. et sp. nov., a new coccoid chlorarachniophyte from Baja California, Mexico. Journal of Plant Research. 120: 661-70. PMID 17909708 DOI: 10.1007/S10265-007-0115-Y |
0.34 |
|
| 2007 |
Nelson MJ, Dang Y, Filek E, Zhang Z, Yu VW, Ishida K, Green BR. Identification and transcription of transfer RNA genes in dinoflagellate plastid minicircles. Gene. 392: 291-8. PMID 17350182 DOI: 10.1016/J.Gene.2007.01.018 |
0.783 |
|
| 2007 |
Koziol AG, Borza T, Ishida K, Keeling P, Lee RW, Durnford DG. Tracing the evolution of the light-harvesting antennae in chlorophyll a/b-containing organisms. Plant Physiology. 143: 1802-16. PMID 17307901 DOI: 10.1104/Pp.106.092536 |
0.623 |
|
| 2007 |
Ota S, Ueda K, Ishida K. TAXONOMIC STUDY OFBIGELOWIELLA LONGIFILASP. NOV. (CHLORARACHNIOPHYTA) AND A TIME-LAPSE VIDEO OBSERVATION OF THE UNIQUE MIGRATION OF AMOEBOID CELLS Journal of Phycology. 43: 333-343. DOI: 10.1111/J.1529-8817.2007.00316.X |
0.321 |
|
| 2006 |
Tanifuji G, Erata M, Ishida K, Onodera N, Hara Y. Diversity of secondary endosymbiont-derived actin-coding genes in cryptomonads and their evolutionary implications. Journal of Plant Research. 119: 205-15. PMID 16570126 DOI: 10.1007/S10265-006-0263-5 |
0.43 |
|
| 2005 |
Ishida K. Protein targeting into plastids: a key to understanding the symbiogenetic acquisitions of plastids. Journal of Plant Research. 118: 237-45. PMID 16044198 DOI: 10.1007/S10265-005-0218-2 |
0.408 |
|
| 2005 |
Takishita K, Patron NJ, Ishida KI, Maruyama T, Keeling PJ. A transcriptional fusion of genes encoding glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and enolase in dinoflagellates Journal of Eukaryotic Microbiology. 52: 343-348. PMID 16014012 DOI: 10.1111/J.1550-7408.2005.00042X |
0.775 |
|
| 2005 |
Nishi A, Ishida K, Endoh H. Reevaluation of the evolutionary position of opalinids based on 18S rDNA, and alpha- and beta-tubulin gene phylogenies. Journal of Molecular Evolution. 60: 695-705. PMID 15931497 DOI: 10.1007/S00239-004-0149-X |
0.423 |
|
| 2005 |
Takishita K, Ishida K, Ishikura M, Maruyama T. Phylogeny of thepsbCgene, coding a photosystem II component CP43, suggests separate origins for the peridinin- and fucoxanthin derivative–containing plastids of dinoflagellates Phycologia. 44: 26-34. DOI: 10.2216/0031-8884(2005)44[26:Potpgc]2.0.Co;2 |
0.414 |
|
| 2005 |
Ota S, Ueda K, Ishida K. Lotharella vacuolata sp. nov., a new species of chlorarachniophyte algae, and time-lapse video observations on its unique post-cell division behavior Phycological Research. 53: 275-286. DOI: 10.1111/J.1440-183.2005.00395.X |
0.354 |
|
| 2004 |
Takishita K, Ishida K, Maruyama T. Phylogeny of nuclear-encoded plastid-targeted GAPDH gene supports separate origins for the peridinin- and the fucoxanthin derivative-containing plastids of dinoflagellates. Protist. 155: 447-58. PMID 15648724 DOI: 10.1078/1434461042650325 |
0.466 |
|
| 2003 |
Takishita K, Ishida K, Maruyama T. An enigmatic GAPDH gene in the symbiotic dinoflagellate genus Symbiodinium and its related species (the order Suessiales): possible lateral gene transfer between two eukaryotic algae, dinoflagellate and euglenophyte. Protist. 154: 443-54. PMID 14658500 DOI: 10.1078/143446103322454176 |
0.491 |
|
| 2003 |
Chaal BK, Ishida K, Green BR. A thylakoidal processing peptidase from the heterokont alga Heterosigma akashiwo. Plant Molecular Biology. 52: 463-72. PMID 12856950 DOI: 10.1023/A:1023900100803 |
0.605 |
|
| 2003 |
Archibald JM, Rogers MB, Toop M, Ishida K, Keeling PJ. Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans. Proceedings of the National Academy of Sciences of the United States of America. 100: 7678-83. PMID 12777624 DOI: 10.1073/Pnas.1230951100 |
0.802 |
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| 2002 |
Ishida K, Green BR. Second- and third-hand chloroplasts in dinoflagellates: phylogeny of oxygen-evolving enhancer 1 (PsbO) protein reveals replacement of a nuclear-encoded plastid gene by that of a haptophyte tertiary endosymbiont. Proceedings of the National Academy of Sciences of the United States of America. 99: 9294-9. PMID 12089328 DOI: 10.1073/Pnas.142091799 |
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| 2000 |
Ishida K, Cavalier‐Smith T, Green BR. ENDOMEMBRANE STRUCTURE AND THE CHLOROPLAST PROTEIN TARGETING PATHWAY INHETEROSIGMA AKASHIWO(RAPHIDOPHYCEAE, CHROMISTA) Journal of Phycology. 36: 1135-1144. DOI: 10.1046/J.1529-8817.2000.00071.X |
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| 2000 |
Ishida K, Cavalier‐Smith T, Green B. ENDOMEMBRANE ULTRASTRUCTURE AND POSSIBLE CHLOROPLAST PROTEIN IMPORT PATHWAY IN
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| 1999 |
Ishida K, Green BR, Cavalier-Smith T. Diversification of a Chimaeric Algal Group, the Chlorarachniophytes: Phylogeny of Nuclear and Nucleomorph Small-Subunit rRNA Genes Molecular Biology and Evolution. 16: 321-331. DOI: 10.1093/oxfordjournals.molbev.a026113 |
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Ishida K, Green BR, Cavalier-Smith T. Diversification of a chimaeric algal group, the chlorarachniophytes: Phylogeny of nuclear and nucleomorph small-subunit rRNA genes Molecular Biology and Evolution. 16: 321-331. DOI: 10.1093/Oxfordjournals.Molbev.A026113 |
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| 1998 |
Ishida K, Cao Y, Hasegawa M, Okada N, Hara Y. The origin of chlorarachniophyte plastids, as inferred from phylogenetic comparisons of amino acid sequences of EF-Tu. Journal of Molecular Evolution. 45: 682-7. PMID 9419245 DOI: 10.1007/Pl00006272 |
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| 1996 |
Ishida K, Nakayama T, Hara Y. Taxonomic studies on the Chlorarachniophyta. II. Generic delimitation of the chlorarachniophytes and description of Gymnochlora stellata gen. et sp. nov. and Lotharella gen. nov. Phycological Research. 44: 37-45. DOI: 10.1111/J.1440-1835.1996.Tb00036.X |
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| 1994 |
Ishida K, Hara Y. Taxonomic studies on the Chlorarachniophyta. I. Chlorarachnion globosum sp. nov. Phycologia. 33: 351-358. DOI: 10.2216/I0031-8884-33-5-351.1 |
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