Richard S. Mann - Publications

Affiliations: 
Biochemistry and Molecular Biophysics Columbia University, New York, NY 
 Biochemistry Stanford University, Palo Alto, CA 
Area:
Drosophila development, Hox genes, appendages
Website:
http://cpmcnet.columbia.edu/dept/gsas/biochem/labs/mann/

134 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Guan W, Bellemin S, Bouchet M, Venkatasubramanian L, Guillermin C, Laurençon A, Kabir C, Darnas A, Godin C, Urdy S, Mann RS, Enriquez J. Post-transcriptional regulation of transcription factor codes in immature neurons drives neuronal diversity. Cell Reports. 39: 110992. PMID 35767953 DOI: 10.1016/j.celrep.2022.110992  0.727
2022 Delker RK, Munce RH, Hu M, Mann RS. Fluorescent labeling of genomic loci in imaginal discs with heterologous DNA-binding proteins. Cell Reports Methods. 2: 100175. PMID 35475221 DOI: 10.1016/j.crmeth.2022.100175  0.317
2021 Loker R, Sanner JE, Mann RS. Cell-type-specific Hox regulatory strategies orchestrate tissue identity. Current Biology : Cb. PMID 34358443 DOI: 10.1016/j.cub.2021.07.030  0.327
2020 Azevedo AW, Dickinson ES, Gurung P, Venkatasubramanian L, Mann RS, Tuthill JC. A size principle for recruitment of leg motor neurons. Elife. 9. PMID 32490810 DOI: 10.7554/Elife.56754  0.761
2020 Diaz-de-la-Loza MD, Loker R, Mann RS, Thompson BJ. Control of tissue morphogenesis by the HOX gene . Development (Cambridge, England). 147. PMID 32122911 DOI: 10.1242/Dev.184564  0.55
2020 Kribelbauer JF, Loker RE, Feng S, Rastogi C, Abe N, Rube HT, Bussemaker HJ, Mann RS. Context-Dependent Gene Regulation by Homeodomain Transcription Factor Complexes Revealed by Shape-Readout Deficient Proteins. Molecular Cell. PMID 32053778 DOI: 10.1016/J.Molcel.2020.01.027  0.429
2020 Azevedo AW, Dickinson ES, Gurung P, Venkatasubramanian L, Mann RS, Tuthill JC. Author response: A size principle for recruitment of Drosophila leg motor neurons Elife. DOI: 10.7554/Elife.56754.Sa2  0.757
2019 Howard CE, Chen CL, Tabachnik T, Hormigo R, Ramdya P, Mann RS. Serotonergic Modulation of Walking in Drosophila. Current Biology : Cb. PMID 31786064 DOI: 10.1016/j.cub.2019.10.042  0.311
2019 Kribelbauer JF, Lu XJ, Rohs R, Mann RS, Bussemaker HJ. Towards a mechanistic understanding of DNA methylation readout by transcription factors. Journal of Molecular Biology. PMID 31689433 DOI: 10.1016/J.Jmb.2019.10.021  0.411
2019 Delker RK, Ranade V, Loker R, Voutev R, Mann RS. Low affinity binding sites in an activating CRM mediate negative autoregulation of the Drosophila Hox gene Ultrabithorax. Plos Genetics. 15: e1008444. PMID 31589607 DOI: 10.1371/Journal.Pgen.1008444  0.678
2019 Sánchez-Higueras C, Rastogi C, Voutev R, Bussemaker HJ, Mann RS, Hombría JC. In vivo Hox binding specificity revealed by systematic changes to a single cis regulatory module. Nature Communications. 10: 3597. PMID 31399572 DOI: 10.1038/S41467-019-11416-1  0.484
2019 Kribelbauer JF, Rastogi C, Bussemaker HJ, Mann RS. Low-Affinity Binding Sites and the Transcription Factor Specificity Paradox in Eukaryotes. Annual Review of Cell and Developmental Biology. PMID 31283382 DOI: 10.1146/Annurev-Cellbio-100617-062719  0.404
2019 Venkatasubramanian L, Mann RS. The development and assembly of the Drosophila adult ventral nerve cord. Current Opinion in Neurobiology. 56: 135-143. PMID 30826502 DOI: 10.1016/J.Conb.2019.01.013  0.763
2019 Venkatasubramanian L, Guo Z, Xu S, Tan L, Xiao Q, Nagarkar-Jaiswal S, Mann RS. Stereotyped terminal axon branching of leg motor neurons mediated by IgSF proteins DIP-α and Dpr10. Elife. 8. PMID 30714901 DOI: 10.7554/Elife.42692  0.767
2019 Venkatasubramanian L, Guo Z, Xu S, Tan L, Xiao Q, Nagarkar-Jaiswal S, Mann RS. Author response: Stereotyped terminal axon branching of leg motor neurons mediated by IgSF proteins DIP-α and Dpr10 Elife. DOI: 10.7554/Elife.42692.028  0.76
2018 Guan W, Venkatasubramanian L, Baek M, Mann RS, Enriquez J. Visualize Drosophila Leg Motor Neuron Axons Through the Adult Cuticle. Journal of Visualized Experiments : Jove. PMID 30451217 DOI: 10.3791/58365  0.769
2018 Matthews BJ, Dudchenko O, Kingan SB, Koren S, Antoshechkin I, Crawford JE, Glassford WJ, Herre M, Redmond SN, Rose NH, Weedall GD, Wu Y, Batra SS, Brito-Sierra CA, Buckingham SD, ... ... Mann RS, et al. Improved reference genome of Aedes aegypti informs arbovirus vector control. Nature. PMID 30429615 DOI: 10.1038/S41586-018-0692-Z  0.582
2018 Zeiske T, Baburajendran N, Kaczynska A, Brasch J, Palmer AG, Shapiro L, Honig B, Mann RS. Intrinsic DNA Shape Accounts for Affinity Differences between Hox-Cofactor Binding Sites. Cell Reports. 24: 2221-2230. PMID 30157419 DOI: 10.1016/J.Celrep.2018.07.100  0.394
2018 Newcomb S, Voutev R, Jory A, Delker RK, Slattery M, Mann RS. cis-regulatory architecture of a short-range EGFR organizing center in the Drosophila melanogaster leg. Plos Genetics. 14: e1007568. PMID 30142157 DOI: 10.1371/Journal.Pgen.1007568  0.754
2018 Rastogi C, Rube HT, Kribelbauer JF, Crocker J, Loker RE, Martini GD, Laptenko O, Freed-Pastor WA, Prives C, Stern DL, Mann RS, Bussemaker HJ. Accurate and sensitive quantification of protein-DNA binding affinity. Proceedings of the National Academy of Sciences of the United States of America. PMID 29610332 DOI: 10.1073/Pnas.1714376115  0.428
2018 Rao S, Chiu TP, Kribelbauer JF, Mann RS, Bussemaker HJ, Rohs R. Systematic prediction of DNA shape changes due to CpG methylation explains epigenetic effects on protein-DNA binding. Epigenetics & Chromatin. 11: 6. PMID 29409522 DOI: 10.1186/S13072-018-0174-4  0.308
2018 Enriquez J, Rio LQ, Blazeski R, Bellemin S, Godement P, Mason C, Mann RS. Differing Strategies Despite Shared Lineages of Motor Neurons and Glia to Achieve Robust Development of an Adult Neuropil in Drosophila. Neuron. PMID 29395908 DOI: 10.1016/j.neuron.2018.01.007  0.706
2017 Requena D, Álvarez JA, Gabilondo H, Loker R, Mann RS, Estella C. Origins and Specification of the Drosophila Wing. Current Biology : Cb. PMID 29225023 DOI: 10.1016/J.Cub.2017.11.023  0.749
2017 Chiu TP, Rao S, Mann RS, Honig B, Rohs R. Genome-wide prediction of minor-groove electrostatic potential enables biophysical modeling of protein-DNA binding. Nucleic Acids Research. PMID 29040720 DOI: 10.1093/Nar/Gkx915  0.401
2017 Kribelbauer JF, Laptenko O, Chen S, Martini GD, Freed-Pastor WA, Prives C, Mann RS, Bussemaker HJ. Quantitative Analysis of the DNA Methylation Sensitivity of Transcription Factor Complexes. Cell Reports. 19: 2383-2395. PMID 28614722 DOI: 10.1016/J.Celrep.2017.05.069  0.438
2016 Merabet S, Mann RS. To Be Specific or Not: The Critical Relationship Between Hox And TALE Proteins. Trends in Genetics : Tig. PMID 27066866 DOI: 10.1016/j.tig.2016.03.004  0.462
2016 Voutev R, Mann RS. Streamlined scanning for enhancer elements in Drosophila melanogaster. Biotechniques. 60: 141-4. PMID 26956092 DOI: 10.2144/000114391  0.416
2016 Mann RS, Howard CE. The Importance of Timing. Cell. 164: 347-8. PMID 26824651 DOI: 10.1016/j.cell.2016.01.010  0.355
2015 Riley TR, Lazarovici A, Mann RS, Bussemaker HJ. Building accurate sequence-to-affinity models from high-throughput in vitro protein-DNA binding data using FeatureREDUCE. Elife. 4. PMID 26701911 DOI: 10.7554/Elife.06397  0.426
2015 O'Connell NE, Lelli K, Mann RS, Palmer AG. Asparagine deamidation reduces DNA-binding affinity of the Drosophila melanogaster Scr homeodomain. Febs Letters. PMID 26435141 DOI: 10.1016/J.Febslet.2015.09.020  0.801
2015 Enriquez J, Venkatasubramanian L, Baek M, Peterson M, Aghayeva U, Mann RS. Specification of individual adult motor neuron morphologies by combinatorial transcription factor codes. Neuron. 86: 955-70. PMID 25959734 DOI: 10.1016/J.Neuron.2015.04.011  0.793
2015 Abe N, Dror I, Yang L, Slattery M, Zhou T, Bussemaker HJ, Rohs R, Mann RS. Deconvolving the recognition of DNA shape from sequence. Cell. 161: 307-18. PMID 25843630 DOI: 10.1016/J.Cell.2015.02.008  0.616
2015 Zhou T, Shen N, Yang L, Abe N, Horton J, Mann RS, Bussemaker HJ, Gordân R, Rohs R. Quantitative modeling of transcription factor binding specificities using DNA shape. Proceedings of the National Academy of Sciences of the United States of America. 112: 4654-9. PMID 25775564 DOI: 10.1080/07391102.2015.1032554  0.406
2015 Crocker J, Abe N, Rinaldi L, McGregor AP, Frankel N, Wang S, Alsawadi A, Valenti P, Plaza S, Payre F, Mann RS, Stern DL. Low affinity binding site clusters confer hox specificity and regulatory robustness. Cell. 160: 191-203. PMID 25557079 DOI: 10.1016/J.Cell.2014.11.041  0.403
2015 Riley TR, Lazarovici A, Mann RS, Bussemaker HJ. Author response: Building accurate sequence-to-affinity models from high-throughput in vitro protein-DNA binding data using FeatureREDUCE Elife. DOI: 10.7554/Elife.06397.030  0.347
2014 Agelopoulos M, McKay DJ, Mann RS. cgChIP: a cell type- and gene-specific method for chromatin analysis. Methods in Molecular Biology (Clifton, N.J.). 1196: 291-306. PMID 25151171 DOI: 10.1007/978-1-4939-1242-1_18  0.675
2014 Riley TR, Slattery M, Abe N, Rastogi C, Liu D, Mann RS, Bussemaker HJ. SELEX-seq: a method for characterizing the complete repertoire of binding site preferences for transcription factor complexes. Methods in Molecular Biology (Clifton, N.J.). 1196: 255-78. PMID 25151169 DOI: 10.1007/978-1-4939-1242-1_16  0.638
2014 Oh H, Slattery M, Ma L, White KP, Mann RS, Irvine KD. Yorkie promotes transcription by recruiting a histone methyltransferase complex. Cell Reports. 8: 449-59. PMID 25017066 DOI: 10.1016/J.Celrep.2014.06.017  0.759
2014 Zhang F, Bhattacharya A, Nelson JC, Abe N, Gordon P, Lloret-Fernandez C, Maicas M, Flames N, Mann RS, Colón-Ramos DA, Hobert O. The LIM and POU homeobox genes ttx-3 and unc-86 act as terminal selectors in distinct cholinergic and serotonergic neuron types. Development (Cambridge, England). 141: 422-35. PMID 24353061 DOI: 10.1242/Dev.099721  0.339
2014 Shazman S, Lee H, Socol Y, Mann RS, Honig B. OnTheFly: a database of Drosophila melanogaster transcription factors and their binding sites. Nucleic Acids Research. 42: D167-71. PMID 24271386 DOI: 10.1093/Nar/Gkt1165  0.407
2013 Slattery M, Voutev R, Ma L, Nègre N, White KP, Mann RS. Divergent transcriptional regulatory logic at the intersection of tissue growth and developmental patterning. Plos Genetics. 9: e1003753. PMID 24039600 DOI: 10.1371/Journal.Pgen.1003753  0.727
2013 Doitsidou M, Flames N, Topalidou I, Abe N, Felton T, Remesal L, Popovitchenko T, Mann R, Chalfie M, Hobert O. A combinatorial regulatory signature controls terminal differentiation of the dopaminergic nervous system in C. elegans. Genes & Development. 27: 1391-405. PMID 23788625 DOI: 10.1101/Gad.217224.113  0.402
2013 Baek M, Enriquez J, Mann RS. Dual role for Hox genes and Hox co-factors in conferring leg motoneuron survival and identity in Drosophila. Development (Cambridge, England). 140: 2027-38. PMID 23536569 DOI: 10.1242/Dev.090902  0.778
2013 Oh H, Slattery M, Ma L, Crofts A, White KP, Mann RS, Irvine KD. Genome-wide association of Yorkie with chromatin and chromatin-remodeling complexes. Cell Reports. 3: 309-18. PMID 23395637 DOI: 10.1016/J.Celrep.2013.01.008  0.766
2013 Shazman S, Chen J, Lee H, Liu P, Mann R, Honig B. 75 OnTheFly database – structural basis to study TF’s DNA-binding specificity Journal of Biomolecular Structure and Dynamics. 31: 48-49. DOI: 10.1080/07391102.2013.786509  0.352
2013 Abe N, Slattery M, Dror I, Rohs R, Honig B, Mann RS. 68 Deconvoluting the recognition of DNA shape from DNA sequence Journal of Biomolecular Structure and Dynamics. 31: 43-43. DOI: 10.1080/07391102.2013.786502  0.592
2012 Jory A, Estella C, Giorgianni MW, Slattery M, Laverty TR, Rubin GM, Mann RS. A survey of 6,300 genomic fragments for cis-regulatory activity in the imaginal discs of Drosophila melanogaster. Cell Reports. 2: 1014-24. PMID 23063361 DOI: 10.1016/J.Celrep.2012.09.010  0.808
2012 Lelli KM, Slattery M, Mann RS. Disentangling the many layers of eukaryotic transcriptional regulation. Annual Review of Genetics. 46: 43-68. PMID 22934649 DOI: 10.1146/Annurev-Genet-110711-155437  0.816
2012 Nagaraj R, Gururaja-Rao S, Jones KT, Slattery M, Negre N, Braas D, Christofk H, White KP, Mann R, Banerjee U. Control of mitochondrial structure and function by the Yorkie/YAP oncogenic pathway. Genes & Development. 26: 2027-37. PMID 22925885 DOI: 10.1101/gad.183061.111  0.656
2012 Fujioka M, Gebelein B, Cofer ZC, Mann RS, Jaynes JB. Engrailed cooperates directly with Extradenticle and Homothorax on a distinct class of homeodomain binding sites to repress sloppy paired. Developmental Biology. 366: 382-92. PMID 22537495 DOI: 10.1016/J.Ydbio.2012.04.004  0.739
2012 Agelopoulos M, McKay DJ, Mann RS. Developmental regulation of chromatin conformation by Hox proteins in Drosophila. Cell Reports. 1: 350-9. PMID 22523743 DOI: 10.1016/J.Celrep.2012.03.003  0.674
2012 Estella C, Voutev R, Mann RS. A dynamic network of morphogens and transcription factors patterns the fly leg. Current Topics in Developmental Biology. 98: 173-98. PMID 22305163 DOI: 10.1016/B978-0-12-386499-4.00007-0  0.744
2011 Lelli KM, Noro B, Mann RS. Variable motif utilization in homeotic selector (Hox)-cofactor complex formation controls specificity. Proceedings of the National Academy of Sciences of the United States of America. 108: 21122-7. PMID 22160705 DOI: 10.1073/Pnas.1114118109  0.814
2011 Slattery M, Riley T, Liu P, Abe N, Gomez-Alcala P, Dror I, Zhou T, Rohs R, Honig B, Bussemaker HJ, Mann RS. Cofactor binding evokes latent differences in DNA binding specificity between Hox proteins. Cell. 147: 1270-82. PMID 22153072 DOI: 10.1016/J.Cell.2011.10.053  0.649
2011 Noro B, Lelli K, Sun L, Mann RS. Competition for cofactor-dependent DNA binding underlies Hox phenotypic suppression. Genes & Development. 25: 2327-32. PMID 22085961 DOI: 10.1101/Gad.175539.111  0.807
2011 Bishop EP, Rohs R, Parker SC, West SM, Liu P, Mann RS, Honig B, Tullius TD. A map of minor groove shape and electrostatic potential from hydroxyl radical cleavage patterns of DNA. Acs Chemical Biology. 6: 1314-20. PMID 21967305 DOI: 10.1021/Cb200155T  0.345
2011 Giorgianni MW, Mann RS. Establishment of medial fates along the proximodistal axis of the Drosophila leg through direct activation of dachshund by Distalless. Developmental Cell. 20: 455-68. PMID 21497759 DOI: 10.1016/j.devcel.2011.03.017  0.373
2011 Slattery M, Ma L, Négre N, White KP, Mann RS. Genome-wide tissue-specific occupancy of the Hox protein Ultrabithorax and Hox cofactor Homothorax in Drosophila. Plos One. 6: e14686. PMID 21483663 DOI: 10.1371/Journal.Pone.0014686  0.724
2010 Joshi R, Sun L, Mann R. Dissecting the functional specificities of two Hox proteins. Genes & Development. 24: 1533-45. PMID 20634319 DOI: 10.1101/Gad.1936910  0.711
2010 Estella C, Mann RS. Non-redundant selector and growth-promoting functions of two sister genes, buttonhead and Sp1, in Drosophila leg development. Plos Genetics. 6: e1001001. PMID 20585625 DOI: 10.1371/Journal.Pgen.1001001  0.757
2010 Crickmore M, Mann RS. A new chisel for sculpting Darwin's endless forms. Nature Cell Biology. 12: 528-9. PMID 20517301 DOI: 10.1038/ncb0610-528  0.744
2010 Rohs R, Jin X, West SM, Joshi R, Honig B, Mann RS. Origins of specificity in protein-DNA recognition. Annual Review of Biochemistry. 79: 233-69. PMID 20334529 DOI: 10.1146/Annurev-Biochem-060408-091030  0.665
2010 West SM, Rohs R, Mann RS, Honig B. Electrostatic interactions between arginines and the minor groove in the nucleosome. Journal of Biomolecular Structure & Dynamics. 27: 861-6. PMID 20232938 DOI: 10.1080/07391102.2010.10508587  0.363
2009 Rohs R, West SM, Sosinsky A, Liu P, Mann RS, Honig B. The role of DNA shape in protein-DNA recognition. Nature. 461: 1248-53. PMID 19865164 DOI: 10.1038/Nature08473  0.373
2009 Peng HW, Slattery M, Mann RS. Transcription factor choice in the Hippo signaling pathway: homothorax and yorkie regulation of the microRNA bantam in the progenitor domain of the Drosophila eye imaginal disc. Genes & Development. 23: 2307-19. PMID 19762509 DOI: 10.1101/Gad.1820009  0.711
2009 Crickmore MA, Ranade V, Mann RS. Regulation of Ubx expression by epigenetic enhancer silencing in response to Ubx levels and genetic variation. Plos Genetics. 5: e1000633. PMID 19730678 DOI: 10.1371/Journal.Pgen.1000633  0.794
2009 Mann RS, Lelli KM, Joshi R. Hox specificity unique roles for cofactors and collaborators. Current Topics in Developmental Biology. 88: 63-101. PMID 19651302 DOI: 10.1016/S0070-2153(09)88003-4  0.829
2009 Baek M, Mann RS. Lineage and birth date specify motor neuron targeting and dendritic architecture in adult Drosophila. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 6904-16. PMID 19474317 DOI: 10.1523/Jneurosci.1585-09.2009  0.562
2009 McKay DJ, Estella C, Mann RS. The origins of the Drosophila leg revealed by the cis-regulatory architecture of the Distalless gene. Development (Cambridge, England). 136: 61-71. PMID 19036798 DOI: 10.1242/Dev.029975  0.802
2008 Crickmore MA, Mann RS. The control of size in animals: insights from selector genes. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 30: 843-53. PMID 18693263 DOI: 10.1002/bies.20806  0.764
2008 Affolter M, Slattery M, Mann RS. A lexicon for homeodomain-DNA recognition. Cell. 133: 1133-5. PMID 18585344 DOI: 10.1016/J.Cell.2008.06.008  0.615
2008 Estella C, McKay DJ, Mann RS. Molecular integration of wingless, decapentaplegic, and autoregulatory inputs into Distalless during Drosophila leg development. Developmental Cell. 14: 86-96. PMID 18194655 DOI: 10.1016/J.Devcel.2007.11.002  0.806
2008 Estella C, Mann RS. Logic of Wg and Dpp induction of distal and medial fates in the Drosophila leg. Development (Cambridge, England). 135: 627-36. PMID 18184724 DOI: 10.1242/Dev.014670  0.738
2007 Joshi R, Passner JM, Rohs R, Jain R, Sosinsky A, Crickmore MA, Jacob V, Aggarwal AK, Honig B, Mann RS. Functional specificity of a Hox protein mediated by the recognition of minor groove structure. Cell. 131: 530-43. PMID 17981120 DOI: 10.1016/J.Cell.2007.09.024  0.816
2007 Gebelein B, Mann RS. Compartmental modulation of abdominal Hox expression by engrailed and sloppy-paired patterns the fly ectoderm. Developmental Biology. 308: 593-605. PMID 17573068 DOI: 10.1016/J.Ydbio.2007.05.017  0.696
2007 Sosinsky A, Honig B, Mann RS, Califano A. Discovering transcriptional regulatory regions in Drosophila by a nonalignment method for phylogenetic footprinting. Proceedings of the National Academy of Sciences of the United States of America. 104: 6305-10. PMID 17395715 DOI: 10.1073/Pnas.0701614104  0.373
2007 Zirin JD, Mann RS. Nubbin and Teashirt mark barriers to clonal growth along the proximal-distal axis of the Drosophila wing. Developmental Biology. 304: 745-58. PMID 17313943 DOI: 10.1016/J.Ydbio.2007.01.025  0.731
2007 Stevens KE, Mann RS. A balance between two nuclear localization sequences and a nuclear export sequence governs extradenticle subcellular localization. Genetics. 175: 1625-36. PMID 17277370 DOI: 10.1534/Genetics.106.066449  0.599
2007 Crickmore MA, Mann RS. Hox control of morphogen mobility and organ development through regulation of glypican expression. Development (Cambridge, England). 134: 327-34. PMID 17166918 DOI: 10.1242/Dev.02737  0.799
2006 Affolter M, Mann R. Hyped-up for Hox in Hyderabad. Workshop on upstream and downstream of Hox genes. Embo Reports. 7: 674-8. PMID 16799462 DOI: 10.1038/sj.embor.7400734  0.39
2006 Noro B, Culi J, McKay DJ, Zhang W, Mann RS. Distinct functions of homeodomain-containing and homeodomain-less isoforms encoded by homothorax. Genes & Development. 20: 1636-50. PMID 16778079 DOI: 10.1101/Gad.1412606  0.805
2006 Crickmore MA, Mann RS. Hox control of organ size by regulation of morphogen production and mobility. Science (New York, N.Y.). 313: 63-8. PMID 16741075 DOI: 10.1126/Science.1128650  0.781
2006 Culi J, Aroca P, Modolell J, Mann RS. jing is required for wing development and to establish the proximo-distal axis of the leg in Drosophila melanogaster. Genetics. 173: 255-66. PMID 16510782 DOI: 10.1534/Genetics.106.056341  0.819
2005 Wildonger J, Mann RS. Evidence that nervy, the Drosophila homolog of ETO/MTG8, promotes mechanosensory organ development by enhancing Notch signaling. Developmental Biology. 286: 507-20. PMID 16168983 DOI: 10.1016/j.ydbio.2005.08.026  0.761
2005 Ice RJ, Wildonger J, Mann RS, Hiebert SW. Comment on "Nervy links protein kinase A to plexin-mediated semaphorin repulsion". Science (New York, N.Y.). 309: 558; author reply 55. PMID 16040690 DOI: 10.1126/Science.1108719  0.737
2005 Wildonger J, Sosinsky A, Honig B, Mann RS. Lozenge directly activates argos and klumpfuss to regulate programmed cell death. Genes & Development. 19: 1034-9. PMID 15879554 DOI: 10.1101/Gad.1298105  0.739
2005 Mann RS, Culi J. Developmental biology: morphogens hitch a greasy ride. Nature. 435: 30-3. PMID 15875002 DOI: 10.1038/435030A  0.775
2005 Wildonger J, Mann RS. The t(8;21) translocation converts AML1 into a constitutive transcriptional repressor. Development (Cambridge, England). 132: 2263-72. PMID 15829516 DOI: 10.1242/dev.01824  0.757
2004 Zirin JD, Mann RS. Differing strategies for the establishment and maintenance of teashirt and homothorax repression in the Drosophila wing. Development (Cambridge, England). 131: 5683-93. PMID 15509768 DOI: 10.1242/Dev.01450  0.767
2004 Gebelein B, McKay DJ, Mann RS. Direct integration of Hox and segmentation gene inputs during Drosophila development. Nature. 431: 653-9. PMID 15470419 DOI: 10.1038/Nature02946  0.786
2004 Bonin CP, Mann RS. A piggyBac transposon gene trap for the analysis of gene expression and function in Drosophila. Genetics. 167: 1801-11. PMID 15342518 DOI: 10.1534/genetics.104.027557  0.436
2004 Culi J, Springer TA, Mann RS. Boca-dependent maturation of beta-propeller/EGF modules in low-density lipoprotein receptor proteins. The Embo Journal. 23: 1372-80. PMID 15014448 DOI: 10.1038/Sj.Emboj.7600132  0.78
2004 Mann RS. Two Pax are better than one. Nature Genetics. 36: 10-1. PMID 14702032 DOI: 10.1038/ng0104-10  0.365
2003 Sosinsky A, Bonin CP, Mann RS, Honig B. Target Explorer: An automated tool for the identification of new target genes for a specified set of transcription factors. Nucleic Acids Research. 31: 3589-92. PMID 12824372 DOI: 10.1093/Nar/Gkg544  0.381
2003 Wang Z, Mann RS. Requirement for two nearly identical TGIF-related homeobox genes in Drosophila spermatogenesis. Development (Cambridge, England). 130: 2853-65. PMID 12756170 DOI: 10.1242/dev.00510  0.597
2003 Culi J, Mann RS. Boca, an endoplasmic reticulum protein required for wingless signaling and trafficking of LDL receptor family members in Drosophila. Cell. 112: 343-54. PMID 12581524 DOI: 10.1016/S0092-8674(02)01279-5  0.789
2003 Kobayashi M, Fujioka M, Tolkunova EN, Deka D, Abu-Shaar M, Mann RS, Jaynes JB. Engrailed cooperates with extradenticle and homothorax to repress target genes in Drosophila. Development (Cambridge, England). 130: 741-51. PMID 12506004 DOI: 10.1242/dev.00289  0.46
2002 Gebelein B, Culi J, Ryoo HD, Zhang W, Mann RS. Specificity of Distalless repression and limb primordia development by abdominal Hox proteins. Developmental Cell. 3: 487-98. PMID 12408801 DOI: 10.1016/S1534-5807(02)00257-5  0.821
2002 Bessa J, Gebelein B, Pichaud F, Casares F, Mann RS. Combinatorial control of Drosophila eye development by eyeless, homothorax, and teashirt. Genes & Development. 16: 2415-27. PMID 12231630 DOI: 10.1101/Gad.1009002  0.781
2002 Mann RS, Carroll SB. Molecular mechanisms of selector gene function and evolution. Current Opinion in Genetics & Development. 12: 592-600. PMID 12200165 DOI: 10.1016/S0959-437X(02)00344-1  0.501
2002 Mann RS, Casares F. Developmental biology: signalling legacies. Nature. 418: 737-9. PMID 12181552 DOI: 10.1038/418737a  0.58
2001 Casares F, Mann RS. The ground state of the ventral appendage in Drosophila. Science (New York, N.Y.). 293: 1477-80. PMID 11520984 DOI: 10.1126/science.1062542  0.628
2001 Affotter M, Mann R. Legs, eyes, or wings - Selectors and signals make the difference Science. 292: 1080-1081. PMID 11352058 DOI: 10.1126/science.1060856  0.4
2000 Mann RS, Morata G. The developmental and molecular biology of genes that subdivide the body of Drosophila. Annual Review of Cell and Developmental Biology. 16: 243-71. PMID 11031237 DOI: 10.1146/annurev.cellbio.16.1.243  0.637
2000 Casares F, Mann RS. A dual role for homothorax in inhibiting wing blade development and specifying proximal wing identities in Drosophila. Development (Cambridge, England). 127: 1499-508. PMID 10704395  0.581
1999 Ryoo HD, Marty T, Casares F, Affolter M, Mann RS. Regulation of Hox target genes by a DNA bound Homothorax/Hox/Extradenticle complex. Development (Cambridge, England). 126: 5137-48. PMID 10529430  0.745
1999 Ryoo HD, Mann RS. The control of trunk Hox specificity and activity by Extradenticle. Genes & Development. 13: 1704-16. PMID 10398683 DOI: 10.1101/Gad.13.13.1704  0.648
1999 Abu-Shaar M, Ryoo HD, Mann RS. Control of the nuclear localization of Extradenticle by competing nuclear import and export signals. Genes & Development. 13: 935-45. PMID 10215621 DOI: 10.1101/Gad.13.8.935  0.628
1999 Gray GE, Mann RS, Mitsiadis E, Henrique D, Carcangiu ML, Banks A, Leiman J, Ward D, Ish-Horowitz D, Artavanis-Tsakonas S. Human ligands of the Notch receptor. The American Journal of Pathology. 154: 785-94. PMID 10079256 DOI: 10.1016/S0002-9440(10)65325-4  0.527
1999 Passner JM, Ryoo HD, Shen L, Mann RS, Aggarwal AK. Structure of a DNA-bound Ultrabithorax-Extradenticle homeodomain complex. Nature. 397: 714-9. PMID 10067897 DOI: 10.1038/17833  0.667
1998 Mann RS, Affolter M. Hox proteins meet more partners. Current Opinion in Genetics & Development. 8: 423-9. PMID 9729718 DOI: 10.1016/S0959-437X(98)80113-5  0.423
1998 Abu-Shaar M, Mann RS. Generation of multiple antagonistic domains along the proximodistal axis during Drosophila leg development. Development (Cambridge, England). 125: 3821-30. PMID 9729490  0.318
1998 González-Crespo S, Abu-Shaar M, Torres M, Martínez-A C, Mann RS, Morata G. Antagonism between extradenticle function and Hedgehog signalling in the developing limb. Nature. 394: 196-200. PMID 9671305 DOI: 10.1038/28197  0.671
1998 Casares F, Mann RS. Control of antennal versus leg development in Drosophila. Nature. 392: 723-6. PMID 9565034 DOI: 10.1038/33706  0.669
1997 Grieder NC, Marty T, Ryoo HD, Mann RS, Affolter M. Synergistic activation of a Drosophila enhancer by HOM/EXD and DPP signaling. The Embo Journal. 16: 7402-10. PMID 9405369 DOI: 10.1093/Emboj/16.24.7402  0.669
1997 Rieckhof GE, Casares F, Ryoo HD, Abu-Shaar M, Mann RS. Nuclear translocation of extradenticle requires homothorax, which encodes an extradenticle-related homeodomain protein. Cell. 91: 171-83. PMID 9346235 DOI: 10.1016/S0092-8674(00)80400-6  0.819
1997 Mann RS. Why are Hox genes clustered? Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 19: 661-4. PMID 9264246 DOI: 10.1002/bies.950190804  0.339
1997 Maconochie MK, Nonchev S, Studer M, Chan SK, Pöpperl H, Sham MH, Mann RS, Krumlauf R. Cross-regulation in the mouse HoxB complex: the expression of Hoxb2 in rhombomere 4 is regulated by Hoxb1. Genes & Development. 11: 1885-95. PMID 9242495 DOI: 10.1101/Gad.11.14.1885  0.422
1997 Jaffe L, Ryoo HD, Mann RS. A role for phosphorylation by casein kinase II in modulating Antennapedia activity in Drosophila. Genes & Development. 11: 1327-40. PMID 9171376 DOI: 10.1101/Gad.11.10.1327  0.597
1997 Chan SK, Ryoo HD, Gould A, Krumlauf R, Mann RS. Switching the in vivo specificity of a minimal Hox-responsive element. Development (Cambridge, England). 124: 2007-14. PMID 9169847  0.629
1996 Mann RS, Abu-Shaar M. Nuclear import of the homeodomain protein extradenticle in response to Wg and Dpp signalling. Nature. 383: 630-3. PMID 8857540 DOI: 10.1038/383630a0  0.426
1996 Mann RS, Chan SK. Extra specificity from extradenticle: the partnership between HOX and PBX/EXD homeodomain proteins. Trends in Genetics : Tig. 12: 258-62. PMID 8763497 DOI: 10.1016/0168-9525(96)10026-3  0.466
1996 Chan SK, Pöpperl H, Krumlauf R, Mann RS. An extradenticle-induced conformational change in a HOX protein overcomes an inhibitory function of the conserved hexapeptide motif. The Embo Journal. 15: 2476-87. PMID 8665855 DOI: 10.1002/J.1460-2075.1996.Tb00605.X  0.5
1996 Chan SK, Mann RS. A structural model for a homeotic protein-extradenticle-DNA complex accounts for the choice of HOX protein in the heterodimer. Proceedings of the National Academy of Sciences of the United States of America. 93: 5223-8. PMID 8643557 DOI: 10.1073/pnas.93.11.5223  0.488
1995 Pöpperl H, Bienz M, Studer M, Chan SK, Aparicio S, Brenner S, Mann RS, Krumlauf R. Segmental expression of Hoxb-1 is controlled by a highly conserved autoregulatory loop dependent upon exd/pbx. Cell. 81: 1031-42. PMID 7600572 DOI: 10.1016/S0092-8674(05)80008-X  0.419
1995 Feinstein PG, Kornfeld K, Hogness DS, Mann RS. Identification of homeotic target genes in Drosophila melanogaster including nervy, a proto-oncogene homologue. Genetics. 140: 573-86. PMID 7498738  0.781
1995 Mann RS. The specificity of homeotic gene function. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 17: 855-63. PMID 7487967 DOI: 10.1002/bies.950171007  0.478
1994 Chan SK, Jaffe L, Capovilla M, Botas J, Mann RS. The DNA binding specificity of Ultrabithorax is modulated by cooperative interactions with extradenticle, another homeoprotein. Cell. 78: 603-15. PMID 7915199 DOI: 10.1016/0092-8674(94)90525-8  0.646
1994 Mann RS. Engrailed-mediated repression of Ultrabithorax is necessary for the parasegment 6 identity in Drosophila. Development (Cambridge, England). 120: 3205-12. PMID 7720563  0.309
1993 Chan SK, Mann RS. The segment identity functions of Ultrabithorax are contained within its homeo domain and carboxy-terminal sequences. Genes & Development. 7: 796-811. PMID 8098307 DOI: 10.1101/Gad.7.5.796  0.387
1993 Irvine KD, Botas J, Jha S, Mann RS, Hogness DS. Negative autoregulation by Ultrabithorax controls the level and pattern of its expression. Development (Cambridge, England). 117: 387-99. PMID 7900988  0.783
1990 Mann RS, Hogness DS. Functional dissection of Ultrabithorax proteins in D. melanogaster. Cell. 60: 597-610. PMID 2105847 DOI: 10.1016/0092-8674(90)90663-Y  0.64
1985 Mann R, Baltimore D. Varying the position of a retrovirus packaging sequence results in the encapsidation of both unspliced and spliced RNAs. Journal of Virology. 54: 401-407. PMID 3989912 DOI: 10.1128/Jvi.54.2.401-407.1985  0.436
1983 Mann R, Mulligan RC, Baltimore D. Construction of a retrovirus packaging mutant and its use to produce helper-free defective retrovirus. Cell. 33: 153-9. PMID 6678608 DOI: 10.1016/0092-8674(83)90344-6  0.585
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