| Year |
Citation |
Score |
| 2023 |
Ma JY, Ting S, Tam B, Pham T, Reich M, Mesirov J, Tamayo P, Kim W. Deciphering the Functional Roles of Individual Cancer Alleles Across Comprehensive Cancer Genomic Studies. Biorxiv : the Preprint Server For Biology. PMID 38014215 DOI: 10.1101/2023.11.14.567106 |
0.319 |
|
| 2023 |
Castanza AS, Recla JM, Eby D, Thorvaldsdóttir H, Bult CJ, Mesirov JP. Extending support for mouse data in the Molecular Signatures Database (MSigDB). Nature Methods. PMID 37704782 DOI: 10.1038/s41592-023-02014-7 |
0.738 |
|
| 2021 |
Benitez JA, Finlay D, Castanza A, Parisian AD, Ma J, Longobardi C, Campos A, Vadla R, Izurieta A, Scerra G, Koga T, Long T, Chavez L, Mesirov JP, Vuori K, et al. Pten Deficiency Leads To Proteasome Addiction, A Novel Vulnerability In Glioblastoma. Neuro-Oncology. PMID 33428749 DOI: 10.1093/neuonc/noab001 |
0.729 |
|
| 2020 |
Yeerna H, Briggs B, Rusert J, Chavez L, Mesirov J, Wechsler-Reya R, Tamayo P. Abstract B21: Childhood Cancer Molecular Map (C2M2) to define medulloblastoma heterogeneity and predict treatment response Cancer Research. 80. DOI: 10.1158/1538-7445.Pedca19-B21 |
0.367 |
|
| 2020 |
Chapman OS, Ehrenberger T, Archer TC, Gold MP, Mundt F, Adam M, Mah CK, Krug K, Chandran S, Dixon JR, Pomeroy SL, Fraenkel E, Mesirov JP, Chavez L. Abstract 447: Integrated omics modeling of transcriptional regulation in medulloblastoma subtypes Cancer Research. 80: 447-447. DOI: 10.1158/1538-7445.Am2020-447 |
0.375 |
|
| 2019 |
Banerjee S, Wei T, Wang J, Lee JJ, Gutierrez HL, Chapman O, Wiley SE, Mayfield JE, Tandon V, Juarez EF, Chavez L, Liang R, Sah RL, Costello C, Mesirov JP, et al. Inhibition of dual-specificity tyrosine phosphorylation-regulated kinase 2 perturbs 26S proteasome-addicted neoplastic progression. Proceedings of the National Academy of Sciences of the United States of America. PMID 31754034 DOI: 10.1073/Pnas.1912033116 |
0.309 |
|
| 2019 |
Okonechnikov K, Hübner J, Chapman O, Chakraborty A, Bump R, Chandran S, Kraft K, Acuna Hidalgo R, Mundlos S, Coufal N, Levy M, Crawford J, Ay F, Mesirov J, Pajtler K, et al. GENE-15. TARGETING OF EPENDYMOMA AS INFORMED BY ONCOGENIC 3D GENOME ORGANIZATION Neuro-Oncology. 21: vi100-vi100. DOI: 10.1093/Neuonc/Noz175.417 |
0.396 |
|
| 2019 |
Okonechnikov K, Hübner J, Kraft K, Hidalgo RA, Bump R, Chandran S, Mundlos S, Mesirov J, Pajtler K, Dixon J, Pfister S, Kool M, Chavez L. GENE-02. CHROMOSOME CONFORMATION ANALYSIS OF EPENDYMOMA IDENTIFIES PUTATIVE TUMOR DEPENDENCY GENES ACTIVATED BY DISTAL ONCOGENIC ENHANCERS Neuro-Oncology. 21: ii80-ii81. DOI: 10.1093/Neuonc/Noz036.073 |
0.337 |
|
| 2018 |
Mah CK, Wenzel AT, Juarez EF, Tabor T, Reich MM, Mesirov JP. An accessible, interactive GenePattern Notebook for analysis and exploration of single-cell transcriptomic data. F1000research. 7: 1306. PMID 31316748 DOI: 10.12688/F1000Research.15830.2 |
0.347 |
|
| 2018 |
Krug K, Mertins P, Zhang B, Hornbeck P, Raju R, Ahmad R, Szucs M, Mundt F, Forestier D, Jane-Valbuena J, Keshishian H, Gillette MA, Tamayo P, Mesirov JP, Jaffe JD, et al. A curated resource for phosphosite-specific signature analysis. Molecular & Cellular Proteomics : McP. PMID 30563849 DOI: 10.1074/Mcp.Tir118.000943 |
0.372 |
|
| 2018 |
Archer TC, Ehrenberger T, Mundt F, Gold MP, Krug K, Mah CK, Mahoney EL, Daniel CJ, LeNail A, Ramamoorthy D, Mertins P, Mani DR, Zhang H, Gillette MA, Clauser K, ... ... Mesirov JP, et al. Proteomics, Post-translational Modifications, and Integrative Analyses Reveal Molecular Heterogeneity within Medulloblastoma Subgroups. Cancer Cell. 34: 396-410.e8. PMID 30205044 DOI: 10.1016/J.Ccell.2018.08.004 |
0.339 |
|
| 2018 |
Li T, Kim A, Rosenbluh J, Horn H, Greenfeld L, An D, Zimmer A, Liberzon A, Bistline J, Natoli T, Li Y, Tsherniak A, Narayan R, Subramanian A, Liefeld T, ... ... Mesirov J, et al. GeNets: a unified web platform for network-based genomic analyses. Nature Methods. PMID 29915188 DOI: 10.1038/S41592-018-0039-6 |
0.545 |
|
| 2018 |
Robinson JT, Turner D, Durand NC, Thorvaldsdóttir H, Mesirov JP, Aiden EL. Juicebox.js Provides a Cloud-Based Visualization System for Hi-C Data. Cell Systems. PMID 29428417 DOI: 10.1016/J.Cels.2018.01.001 |
0.319 |
|
| 2018 |
Carlin DE, Kim F, Ideker T, Mesirov JP. A unified GenomeSpace recipe to identify essential genes and associated subnetworks from Genome-Scale CRISPR-Cas9 knockout screens F1000research. 7: 1636. DOI: 10.12688/F1000Research.16290.1 |
0.301 |
|
| 2018 |
Yeerna H, Kim W, Hahn WC, Mesirov J, Tamayo P. Abstract 1416: Pan-cancer mutual vulnerability and viability Cancer Research. 78: 1416-1416. DOI: 10.1158/1538-7445.Am2018-1416 |
0.426 |
|
| 2017 |
Carlin D, Kosnicki K, Garamszegi S, Ideker T, Thorvaldsdóttir H, Reich M, Mesirov J. A multi-tool recipe to identify regions of protein-DNA binding and their influence on associated gene expression. F1000research. 6: 784. PMID 29487738 DOI: 10.12688/F1000Research.11616.1 |
0.343 |
|
| 2017 |
Hachigian LJ, Carmona V, Fenster RJ, Kulicke R, Heilbut A, Sittler A, Pereira de Almeida L, Mesirov JP, Gao F, Kolaczyk ED, Heiman M. Control of Huntington's Disease-Associated Phenotypes by the Striatum-Enriched Transcription Factor Foxp2. Cell Reports. 21: 2688-2695. PMID 29212017 DOI: 10.1016/J.Celrep.2017.11.018 |
0.302 |
|
| 2017 |
Robinson JT, Thorvaldsdóttir H, Wenger AM, Zehir A, Mesirov JP. Variant Review with the Integrative Genomics Viewer. Cancer Research. 77: e31-e34. PMID 29092934 DOI: 10.1158/0008-5472.Can-17-0337 |
0.388 |
|
| 2017 |
Kim JW, Abudayyeh OO, Yeerna H, Yeang CH, Stewart M, Jenkins RW, Kitajima S, Konieczkowski DJ, Medetgul-Ernar K, Cavazos T, Mah C, Ting S, Van Allen EM, Cohen O, Mcdermott J, ... ... Mesirov JP, et al. Decomposing Oncogenic Transcriptional Signatures to Generate Maps of Divergent Cellular States. Cell Systems. 5: 105-118.e9. PMID 28837809 DOI: 10.1016/J.Cels.2017.08.002 |
0.583 |
|
| 2017 |
Reich M, Tabor T, Liefeld T, Thorvaldsdóttir H, Hill B, Tamayo P, Mesirov JP. The GenePattern Notebook Environment. Cell Systems. PMID 28822753 DOI: 10.1016/J.Cels.2017.07.003 |
0.306 |
|
| 2017 |
Huang FW, Mosquera JM, Garofalo A, Oh C, Baco M, Amin-Mansour A, Rabasha B, Bahl S, Mullane SA, Robinson BD, Aldubayan S, Khani F, Karir B, Kim E, Chimene-Weiss J, ... ... Mesirov J, et al. Exome Sequencing of African-American Prostate Cancer Reveals Loss-of-Function ERF Mutations. Cancer Discovery. PMID 28515055 DOI: 10.1158/2159-8290.Cd-16-0960 |
0.316 |
|
| 2017 |
Boulay G, Awad ME, Riggi N, Archer TC, Iyer S, Boonseng WE, Rossetti NE, Naigles B, Rengarajan S, Volorio A, Kim JC, Mesirov JP, Tamayo P, Pomeroy SL, Aryee MJ, et al. OTX2 Activity at Distal Regulatory Elements Shapes the Chromatin Landscape of Group 3 Medulloblastoma. Cancer Discovery. PMID 28213356 DOI: 10.1158/2159-8290.Cd-16-0844 |
0.351 |
|
| 2017 |
Liefeld T, Ocana M, Reich M, Thorvaldsdottir H, Mesirov JP. GenomeSpace: integrating cloud storage providers for genomic analysis F1000research. 6. DOI: 10.7490/F1000Research.1114640.1 |
0.344 |
|
| 2017 |
Kim JW, Hahn WC, Mesirov J, Tamayo P. Abstract A09: Decomposing Oncogenic Transcriptional Signatures to Generate Maps of RAS/MAPK Cellular States Molecular Cancer Therapeutics. 16. DOI: 10.1158/1538-8514.Synthleth-A09 |
0.367 |
|
| 2017 |
Kim WJ, Hahn WC, Mesirov J, Tamayo P. Abstract 3035: Decomposing oncogenic transcriptional signatures to generate maps of divergent cellular states Cancer Research. 77: 3035-3035. DOI: 10.1158/1538-7445.Am2017-3035 |
0.374 |
|
| 2017 |
Yeerna H, Rangan R, Aguirre A, Kim W, Vazquez F, Weir B, Ghandi M, Tsherniak A, Boehm J, Hahn W, Mesirov J, Tamayo P. Abstract 1555: Pan-cancer patterns of synthetic lethality: statistical modeling of gene dependency profiles Cancer Research. 77: 1555-1555. DOI: 10.1158/1538-7445.Am2017-1555 |
0.406 |
|
| 2016 |
Spira A, Disis ML, Schiller JT, Vilar E, Rebbeck TR, Bejar R, Ideker T, Arts J, Yurgelun MB, Mesirov JP, Rao A, Garber J, Jaffee EM, Lippman SM. Leveraging premalignant biology for immune-based cancer prevention. Proceedings of the National Academy of Sciences of the United States of America. PMID 27638202 DOI: 10.1073/Pnas.1608077113 |
0.353 |
|
| 2016 |
D'Antonio M, Tamayo P, Mesirov JP, Frazer KA. Kataegis Expression Signature in Breast Cancer Is Associated with Late Onset, Better Prognosis, and Higher HER2 Levels. Cell Reports. PMID 27373164 DOI: 10.1016/J.Celrep.2016.06.026 |
0.369 |
|
| 2016 |
Kim JW, Botvinnik OB, Abudayyeh O, Birger C, Rosenbluh J, Shrestha Y, Abazeed ME, Hammerman PS, DiCara D, Konieczkowski DJ, Johannessen CM, Liberzon A, Alizad-Rahvar AR, Alexe G, Aguirre A, ... ... Mesirov JP, et al. Characterizing genomic alterations in cancer by complementary functional associations. Nature Biotechnology. PMID 27088724 DOI: 10.1038/Nbt.3527 |
0.427 |
|
| 2016 |
Hanaford AR, Archer TC, Price A, Kahlert UD, Maciaczyk J, Nikkhah G, Kim JW, Ehrenberger T, Clemons PA, Dančík V, Seashore-Ludlow B, Viswanathan V, Stewart ML, Rees M, Shamji AF, ... ... Mesirov JP, et al. DiSCoVERing innovative therapies for rare tumors: combining genetically accurate disease models with in silico analysis to identify novel therapeutic targets. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 27012813 DOI: 10.1158/1078-0432.Ccr-15-3011 |
0.315 |
|
| 2016 |
Godec J, Tan Y, Liberzon A, Tamayo P, Bhattacharya S, Butte AJ, Mesirov JP, Haining WN. Compendium of Immune Signatures Identifies Conserved and Species-Specific Biology in Response to Inflammation. Immunity. PMID 26795250 DOI: 10.1016/J.Immuni.2015.12.006 |
0.364 |
|
| 2016 |
Qu K, Garamszegi S, Wu F, Thorvaldsdottir H, Liefeld T, Ocana M, Borges-Rivera D, Pochet N, Robinson JT, Demchak B, Hull T, Ben-Artzi G, Blankenberg D, Barber GP, Lee BT, ... ... Mesirov JP, et al. Integrative genomic analysis by interoperation of bioinformatics tools in GenomeSpace. Nature Methods. PMID 26780094 DOI: 10.1038/Nmeth.3732 |
0.337 |
|
| 2016 |
Tamayo P, Steinhardt G, Liberzon A, Mesirov JP. The limitations of simple gene set enrichment analysis assuming gene independence. Statistical Methods in Medical Research. 25: 472-87. PMID 23070592 DOI: 10.1177/0962280212460441 |
0.343 |
|
| 2016 |
Reich M, Tabor T, Carr P, Eby D, Thorvaldsdottir H, Hill B, Liefeld T, Tamayo P, Mesirov J. GenePattern Notebooks: An integrative analytical environment for genomic research F1000research. 5. DOI: 10.7490/F1000Research.1112770.1 |
0.315 |
|
| 2016 |
Reich MM, Tabor T, Liefeld JT, Carr P, Hill B, Nazaire M, Eby D, Thorvaldsdottir H, Tamayo P, Mesirov JP. Abstract 5273: GenePattern Notebooks: an integrative analytical environment for cancer research Cancer Research. 76: 5273-5273. DOI: 10.1158/1538-7445.Am2016-5273 |
0.383 |
|
| 2016 |
Hanaford AR, Archer TC, Price A, Kahlert U, Maciaczyk J, Guido N, Kim W, Ehrenberger T, Clemons P, Dancik V, Seashore-Ludlow B, Viswanathan V, Stewart M, Rees M, Shamji A, ... ... Mesirov J, et al. Abstract 2476: DiSCoVERing innovative therapies for rare tumors: Combining genetically accurate disease models with advanced in silico analysis to identify novel therapeutic targets Cancer Research. 76: 2476-2476. DOI: 10.1158/1538-7445.Am2016-2476 |
0.307 |
|
| 2016 |
Rusert J, Garancher A, Brabetz S, Udaka Y, Jensen J, Esparza L, Seker-Cin H, Qi L, Kogiso M, Schubert S, Milde T, Cho Y, Li X, Olson J, Tamayo P, ... ... Mesirov J, et al. PDTB-23. CHEMI-GENOMIC ANALYSIS OF PATIENT-DERIVED XENOGRAFTS TO IDENTIFY PERSONALIZED THERAPIES FOR MEDULLOBLASTOMA Neuro-Oncology. 18: vi154-vi155. DOI: 10.1093/Neuonc/Now212.642 |
0.33 |
|
| 2015 |
Liberzon A, Birger C, Thorvaldsdóttir H, Ghandi M, Mesirov JP, Tamayo P. The Molecular Signatures Database (MSigDB) hallmark gene set collection. Cell Systems. 1: 417-425. PMID 26771021 DOI: 10.1016/J.Cels.2015.12.004 |
0.371 |
|
| 2015 |
Zhu X, Girardo D, Govek EE, John K, Mellén M, Tamayo P, Mesirov JP, Hatten ME. Role of Tet1/3 Genes and Chromatin Remodeling Genes in Cerebellar Circuit Formation. Neuron. PMID 26711116 DOI: 10.1016/J.Neuron.2015.11.030 |
0.315 |
|
| 2015 |
Tan Y, Wu F, Tamayo P, Haining WN, Mesirov JP. Constellation Map: Downstream visualization and interpretation of gene set enrichment results. F1000research. 4: 167. PMID 26594333 DOI: 10.12688/F1000Research.6644.1 |
0.34 |
|
| 2015 |
Papageorgiou A, Rapley J, Mesirov JP, Tamayo P, Avruch J. A genome-wide siRNA screen in mammalian cells for regulators of S6 phosphorylation. Plos One. 10: e0116096. PMID 25790369 DOI: 10.1371/Journal.Pone.0116096 |
0.377 |
|
| 2015 |
Thorvaldsdóttir H, Robinson JT, Turner D, Mesirov JP. A genomic data viewer for iPad. Genome Biology. 16: 46. PMID 25723152 DOI: 10.1186/S13059-015-0595-3 |
0.359 |
|
| 2015 |
Johannessen C, Konieczkowski D, Abudayyeh O, Kim JW, Cooper Z, Piris A, Frederick D, Barzily-Rokni M, Straussman R, Haq R, Fisher D, Mesirov J, Hahn W, Flaherty K, Wargo J, et al. Abstract PR04: A melanoma transcriptional state distinction influences sensitivity to MAPK pathway inhibitors Clinical Cancer Research. 21. DOI: 10.1158/1557-3265.Pms14-Pr04 |
0.305 |
|
| 2015 |
Papageorgiou A, Tamayo P, Mesirov J, Avruch J, Rapley J. Abstract A30: A genome-wide siRNA screen in mammalian cells for regulators of S6 phosphorylation Molecular Cancer Therapeutics. 14. DOI: 10.1158/1538-8514.Pi3K14-A30 |
0.381 |
|
| 2014 |
Cowley GS, Weir BA, Vazquez F, Tamayo P, Scott JA, Rusin S, East-Seletsky A, Ali LD, Gerath WF, Pantel SE, Lizotte PH, Jiang G, Hsiao J, Tsherniak A, Dwinell E, ... ... Mesirov JP, et al. Parallel genome-scale loss of function screens in 216 cancer cell lines for the identification of context-specific genetic dependencies. Scientific Data. 1: 140035. PMID 25984343 DOI: 10.1038/Sdata.2014.35 |
0.364 |
|
| 2014 |
Cowley GS, Weir BA, Vazquez F, Tamayo P, Scott JA, Rusin S, East-Seletsky A, Ali LD, Gerath WF, Pantel SE, Lizotte PH, Jiang G, Hsiao J, Tsherniak A, Dwinell E, ... ... Mesirov JP, et al. Erratum: Parallel genome-scale loss of function screens in 216 cancer cell lines for the identification of context-specific genetic dependencies. Scientific Data. 1: 140044. PMID 25982629 DOI: 10.1038/Sdata.2014.44 |
0.347 |
|
| 2014 |
Barbie TU, Alexe G, Aref AR, Li S, Zhu Z, Zhang X, Imamura Y, Thai TC, Huang Y, Bowden M, Herndon J, Cohoon TJ, Fleming T, Tamayo P, Mesirov JP, et al. Targeting an IKBKE cytokine network impairs triple-negative breast cancer growth. The Journal of Clinical Investigation. 124: 5411-23. PMID 25365225 DOI: 10.1172/Jci75661 |
0.303 |
|
| 2014 |
Demchak B, Hull T, Reich M, Liefeld T, Smoot M, Ideker T, Mesirov JP. Cytoscape: the network visualization tool for GenomeSpace workflows. F1000research. 3: 151. PMID 25165537 DOI: 10.12688/F1000Research.4492.2 |
0.315 |
|
| 2014 |
Reich MM, Liefeld J, Ocana M, Jang D, Robinson J, Carr P, Hill B, Tabor T, Thorvaldsdottir H, Regev A, Mesirov JP. Abstract 5331: GenomeSpace: An environment for frictionless bioinformatics Cancer Research. 74: 5331-5331. DOI: 10.1158/1538-7445.Am2014-5331 |
0.43 |
|
| 2013 |
Campagne F, Dorff KC, Chambwe N, Robinson JT, Mesirov JP. Compression of structured high-throughput sequencing data. Plos One. 8: e79871. PMID 24260313 DOI: 10.1371/Journal.Pone.0079871 |
0.35 |
|
| 2013 |
Abazeed ME, Adams DJ, Hurov KE, Tamayo P, Creighton CJ, Sonkin D, Giacomelli AO, Du C, Fries DF, Wong KK, Mesirov JP, Loeffler JS, Schreiber SL, Hammerman PS, Meyerson M. Integrative radiogenomic profiling of squamous cell lung cancer. Cancer Research. 73: 6289-98. PMID 23980093 DOI: 10.1158/0008-5472.Can-13-1616 |
0.354 |
|
| 2013 |
Spidlen J, Barsky A, Breuer K, Carr P, Nazaire MD, Hill BA, Qian Y, Liefeld T, Reich M, Mesirov JP, Wilkinson P, Scheuermann RH, Sekaly RP, Brinkman RR. GenePattern flow cytometry suite. Source Code For Biology and Medicine. 8: 14. PMID 23822732 DOI: 10.1186/1751-0473-8-14 |
0.322 |
|
| 2013 |
Hagerstrand D, Tong A, Schumacher SE, Ilic N, Shen RR, Cheung HW, Vazquez F, Shrestha Y, Kim SY, Giacomelli AO, Rosenbluh J, Schinzel AC, Spardy NA, Barbie DA, Mermel CH, ... ... Mesirov JP, et al. Systematic interrogation of 3q26 identifies TLOC1 and SKIL as cancer drivers. Cancer Discovery. 3: 1044-57. PMID 23764425 DOI: 10.1158/2159-8290.Cd-12-0592 |
0.36 |
|
| 2013 |
Raeder MB, Birkeland E, Trovik J, Krakstad C, Shehata S, Schumacher S, Zack TI, Krohn A, Werner HM, Moody SE, Wik E, Stefansson IM, Holst F, Oyan AM, Tamayo P, ... Mesirov JP, et al. Integrated genomic analysis of the 8q24 amplification in endometrial cancers identifies ATAD2 as essential to MYC-dependent cancers. Plos One. 8: e54873. PMID 23393560 DOI: 10.1371/Journal.Pone.0054873 |
0.386 |
|
| 2013 |
Shao DD, Tsherniak A, Gopal S, Weir BA, Tamayo P, Stransky N, Schumacher SE, Zack TI, Beroukhim R, Garraway LA, Margolin AA, Root DE, Hahn WC, Mesirov JP. ATARiS: computational quantification of gene suppression phenotypes from multisample RNAi screens. Genome Research. 23: 665-78. PMID 23269662 DOI: 10.1101/Gr.143586.112 |
0.4 |
|
| 2013 |
Verhaak RG, Tamayo P, Yang JY, Hubbard D, Zhang H, Creighton CJ, Fereday S, Lawrence M, Carter SL, Mermel CH, Kostic AD, Etemadmoghadam D, Saksena G, Cibulskis K, Duraisamy S, ... ... Mesirov JP, et al. Prognostically relevant gene signatures of high-grade serous ovarian carcinoma. The Journal of Clinical Investigation. 123: 517-25. PMID 23257362 DOI: 10.1172/Jci65833 |
0.336 |
|
| 2013 |
Thorvaldsdóttir H, Robinson JT, Mesirov JP. Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration. Briefings in Bioinformatics. 14: 178-92. PMID 22517427 DOI: 10.1093/Bib/Bbs017 |
0.386 |
|
| 2013 |
Reich M, Liefeld J, Thorvaldsdottir H, Ocana M, Tabor T, Jang D, Mesirov JP. Abstract 5141: GenomeSpace: an environment for frictionless bioinformatics. Cancer Research. 73: 5141-5141. DOI: 10.1158/1538-7445.Am2013-5141 |
0.429 |
|
| 2012 |
Conley BA, Cavenagh MM, Lively TG, Eberhard DA, Williams PM, Bigbee WL, Mesirov JP, Polley MC, Kim KY, Tricoli JV. Criteria for use of omics-based predictors in NCI-sponsored clinical trials. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 30: 58. PMID 28142454 DOI: 10.1200/Jco.2012.30.30_Suppl.58 |
0.339 |
|
| 2012 |
Rosenbluh J, Nijhawan D, Cox AG, Li X, Neal JT, Schafer EJ, Zack TI, Wang X, Tsherniak A, Schinzel AC, Shao DD, Schumacher SE, Weir BA, Vazquez F, Cowley GS, ... ... Mesirov JP, et al. β-Catenin-driven cancers require a YAP1 transcriptional complex for survival and tumorigenesis. Cell. 151: 1457-73. PMID 23245941 DOI: 10.1016/J.Cell.2012.11.026 |
0.334 |
|
| 2012 |
Nijhawan D, Zack TI, Ren Y, Strickland MR, Lamothe R, Schumacher SE, Tsherniak A, Besche HC, Rosenbluh J, Shehata S, Cowley GS, Weir BA, Goldberg AL, Mesirov JP, Root DE, et al. Cancer vulnerabilities unveiled by genomic loss. Cell. 150: 842-54. PMID 22901813 DOI: 10.1016/J.Cell.2012.07.023 |
0.42 |
|
| 2012 |
Ren Y, Cheung HW, von Maltzhan G, Agrawal A, Cowley GS, Weir BA, Boehm JS, Tamayo P, Karst AM, Liu JF, Hirsch MS, Mesirov JP, Drapkin R, Root DE, Lo J, et al. Targeted tumor-penetrating siRNA nanocomplexes for credentialing the ovarian cancer oncogene ID4. Science Translational Medicine. 4: 147ra112. PMID 22896676 DOI: 10.1126/Scitranslmed.3003778 |
0.365 |
|
| 2012 |
Pugh TJ, Weeraratne SD, Archer TC, Pomeranz Krummel DA, Auclair D, Bochicchio J, Carneiro MO, Carter SL, Cibulskis K, Erlich RL, Greulich H, Lawrence MS, Lennon NJ, McKenna A, Meldrim J, ... ... Mesirov JP, et al. Medulloblastoma exome sequencing uncovers subtype-specific somatic mutations. Nature. 488: 106-10. PMID 22820256 DOI: 10.1038/Nature11329 |
0.319 |
|
| 2012 |
Lai L, Liberzon A, Hennessey J, Jiang G, Qi J, Mesirov JP, Ge SX. AraPath: a knowledgebase for pathway analysis in Arabidopsis. Bioinformatics (Oxford, England). 28: 2291-2. PMID 22760305 DOI: 10.1093/Bioinformatics/Bts421 |
0.4 |
|
| 2012 |
Wood KC, Konieczkowski DJ, Johannessen CM, Boehm JS, Tamayo P, Botvinnik OB, Mesirov JP, Hahn WC, Root DE, Garraway LA, Sabatini DM. MicroSCALE screening reveals genetic modifiers of therapeutic response in melanoma. Science Signaling. 5: rs4. PMID 22589389 DOI: 10.1126/Scisignal.2002612 |
0.325 |
|
| 2012 |
Barretina J, Caponigro G, Stransky N, Venkatesan K, Margolin AA, Kim S, Wilson CJ, Lehár J, Kryukov GV, Sonkin D, Reddy A, Liu M, Murray L, Berger MF, Monahan JE, ... ... Mesirov JP, et al. The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity. Nature. 483: 603-7. PMID 22460905 DOI: 10.1038/Nature11003 |
0.399 |
|
| 2012 |
Ren Y, Cheung HW, Drapkin R, Root D, Lo J, Fogal V, Ruoslahti E, Hahn W, Bhatia S, von Maltzahn G, Agrawal A, Cowley G, Weir B, Boehm J, Tamayo P, ... Mesirov J, et al. Abstract PR5: Treatment of ovarian cancer with targeted tumor-penetrating siRNA nanocomplexes Cancer Research. 72: PR5-PR5. DOI: 10.1158/1538-7445.Nonrna12-Pr5 |
0.368 |
|
| 2012 |
Pugh TJ, Cho Y, Archer T, Weeraratne D, Jones DTW, Jaeger N, Auclair D, Cibulskis K, Lawrence MS, Ramos AH, Shefler E, Sivachenko A, Tamayo P, Mesirov JP, Gabriel SB, et al. Abstract 4868: Medulloblastoma exome sequencing uncovers subtype-specific somatic mutations within a wide spectrum of genetic heterogeneity Cancer Research. 72: 4868-4868. DOI: 10.1158/1538-7445.Am2012-4868 |
0.33 |
|
| 2012 |
Robinson JT, Thorvaldsdottir H, Mesirov J. Abstract 3968: Exploring cancer datasets in the integrative genomics viewer (IGV) Cancer Research. 72: 3968-3968. DOI: 10.1158/1538-7445.Am2012-3968 |
0.45 |
|
| 2012 |
Reich M, Liefeld J, Thorvaldsdottir H, Ocana M, Polk E, Jang D, Mesirov J. Abstract 3966: GenomeSpace: An environment for frictionless bioinformatics Cancer Research. 72: 3966-3966. DOI: 10.1158/1538-7445.Am2012-3966 |
0.433 |
|
| 2012 |
Weeraratne SD, Archer T, Pugh TJ, Hargreaves D, Yu F, Kautzman A, Jones DTW, Jaeger N, Tamayo P, Mesirov JP, Pfister SM, Lichter P, Crabtree G, Meyerson M, Pomeroy SL, et al. Abstract 1313: Mutually exclusive somatic mutations in WNT pathway medulloblastomas reveal a critical interaction between DDX3X and SMARCA4 Cancer Research. 72: 1313-1313. DOI: 10.1158/1538-7445.Am2012-1313 |
0.31 |
|
| 2011 |
Cheung HW, Cowley GS, Weir BA, Boehm JS, Rusin S, Scott JA, East A, Ali LD, Lizotte PH, Wong TC, Jiang G, Hsiao J, Mermel CH, Getz G, Barretina J, ... ... Mesirov JP, et al. Systematic investigation of genetic vulnerabilities across cancer cell lines reveals lineage-specific dependencies in ovarian cancer. Proceedings of the National Academy of Sciences of the United States of America. 108: 12372-7. PMID 21746896 DOI: 10.1073/Pnas.1109363108 |
0.399 |
|
| 2011 |
Liberzon A, Subramanian A, Pinchback R, Thorvaldsdóttir H, Tamayo P, Mesirov JP. Molecular signatures database (MSigDB) 3.0. Bioinformatics (Oxford, England). 27: 1739-40. PMID 21546393 DOI: 10.1093/Bioinformatics/Btr260 |
0.589 |
|
| 2011 |
Tamayo P, Cho YJ, Tsherniak A, Greulich H, Ambrogio L, Schouten-van Meeteren N, Zhou T, Buxton A, Kool M, Meyerson M, Pomeroy SL, Mesirov JP. Predicting relapse in patients with medulloblastoma by integrating evidence from clinical and genomic features. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 29: 1415-23. PMID 21357789 DOI: 10.1200/Jco.2010.28.1675 |
0.345 |
|
| 2011 |
Robinson JT, Thorvaldsdóttir H, Winckler W, Guttman M, Lander ES, Getz G, Mesirov JP. Integrative genomics viewer. Nature Biotechnology. 29: 24-6. PMID 21221095 DOI: 10.1038/Nbt.1754 |
0.417 |
|
| 2011 |
Cho YJ, Tsherniak A, Tamayo P, Santagata S, Ligon A, Greulich H, Berhoukim R, Amani V, Goumnerova L, Eberhart CG, Lau CC, Olson JM, Gilbertson RJ, Gajjar A, Delattre O, ... ... Mesirov JP, et al. Integrative genomic analysis of medulloblastoma identifies a molecular subgroup that drives poor clinical outcome. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 29: 1424-30. PMID 21098324 DOI: 10.1200/Jco.2010.28.5148 |
0.365 |
|
| 2011 |
Galili N, Tamayo P, Botvinnik OB, Mesirov JP, Zikria J, Brown G, Raza A. Gene Expression Studies May Identify Lower Risk Myelodysplastic Syndrome Patients Likely to Respond to Therapy with Ezatiostat Hydrochloride (TLK199) Blood. 118: 2779-2779. DOI: 10.1182/Blood.V118.21.2779.2779 |
0.336 |
|
| 2011 |
Barretina J, Stransky N, Caponigro G, Kim S, Margolin A, Venkhatesan K, Kryukov G, Berger M, Monahan J, Morais P, Meltzer J, Mahan S, Sonkin D, Raman P, Jones M, ... ... Mesirov J, et al. Abstract 5455: Integrative analysis of the Cancer Cell Line Encyclopedia reveals genetic and transcriptional predictors of compound sensitivity Cancer Research. 71: 5455-5455. DOI: 10.1158/1538-7445.Am2011-5455 |
0.4 |
|
| 2011 |
Cho Y, Tamayo P, Tsherniak A, Meyerson M, Mesirov JP, Pomeroy SL. Abstract 4760: Molecular classification and risk-stratification in medulloblastoma using an integrative genomic approach Cancer Research. 71: 4760-4760. DOI: 10.1158/1538-7445.Am2011-4760 |
0.381 |
|
| 2010 |
Jagani Z, Mora-Blanco EL, Sansam CG, McKenna ES, Wilson B, Chen D, Klekota J, Tamayo P, Nguyen PT, Tolstorukov M, Park PJ, Cho YJ, Hsiao K, Buonamici S, Pomeroy SL, ... Mesirov JP, et al. Loss of the tumor suppressor Snf5 leads to aberrant activation of the Hedgehog-Gli pathway. Nature Medicine. 16: 1429-33. PMID 21076395 DOI: 10.1038/Nm.2251 |
0.31 |
|
| 2010 |
Wolfer A, Wittner BS, Irimia D, Flavin RJ, Lupien M, Gunawardane RN, Meyer CA, Lightcap ES, Tamayo P, Mesirov JP, Liu XS, Shioda T, Toner M, Loda M, Brown M, et al. MYC regulation of a "poor-prognosis" metastatic cancer cell state. Proceedings of the National Academy of Sciences of the United States of America. 107: 3698-703. PMID 20133671 DOI: 10.1073/Pnas.0914203107 |
0.344 |
|
| 2010 |
Verhaak RG, Hoadley KA, Purdom E, Wang V, Qi Y, Wilkerson MD, Miller CR, Ding L, Golub T, Mesirov JP, Alexe G, Lawrence M, O'Kelly M, Tamayo P, Weir BA, et al. Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1. Cancer Cell. 17: 98-110. PMID 20129251 DOI: 10.1016/J.Ccr.2009.12.020 |
0.43 |
|
| 2010 |
Wolfer A, Wittner BS, Irimia D, Flavin RJ, Lupien M, Gunawardane RN, Meyer CA, Lightcap ES, Tamayo P, Mesirov JP, Liu XS, Shioda T, Toner M, Loda M, Brown M, et al. Abstract 3300: MYC regulation of a “poor prognosis” metastatic cancer cell state Cancer Research. 70: 3300-3300. DOI: 10.1158/1538-7445.Am10-3300 |
0.348 |
|
| 2010 |
Stransky N, Venkatesan K, Barretina J, Caponigro G, Margolin A, Morrissey M, Raman P, Getz G, Berger M, Johannessen C, Callahan A, Morais P, Mahan S, Gupta S, Onofrio R, ... ... Mesirov J, et al. Abstract PR4: Integrative analysis of genomic and pharmacologic data from the Cancer Cell Line Encyclopedia Clinical Cancer Research. 16. DOI: 10.1158/1078-0432.Tcmusa10-Pr4 |
0.4 |
|
| 2009 |
Barbie DA, Tamayo P, Boehm JS, Kim SY, Moody SE, Dunn IF, Schinzel AC, Sandy P, Meylan E, Scholl C, Fröhling S, Chan EM, Sos ML, Michel K, Mermel C, ... ... Mesirov JP, et al. Systematic RNA interference reveals that oncogenic KRAS-driven cancers require TBK1. Nature. 462: 108-12. PMID 19847166 DOI: 10.1038/Nature08460 |
0.351 |
|
| 2009 |
Robinson J, Thorvaldsdottir H, Nazaire M, Winckler W, Reich M, Getz G, Mesirov J. Abstract C60: The integrative genomics viewer Cancer Research. 69. DOI: 10.1158/0008-5472.Fbcr09-C60 |
0.432 |
|
| 2008 |
Kuehn H, Liberzon A, Reich M, Mesirov JP. Using GenePattern for gene expression analysis. Current Protocols in Bioinformatics / Editoral Board, Andreas D. Baxevanis ... [Et Al.]. Unit 7.12. PMID 18551415 DOI: 10.1002/0471250953.Bi0712S22 |
0.377 |
|
| 2008 |
Mishra PJ, Mishra PJ, Humeniuk R, Medina DJ, Alexe G, Mesirov JP, Ganesan S, Glod JW, Banerjee D. Carcinoma-associated fibroblast-like differentiation of human mesenchymal stem cells. Cancer Research. 68: 4331-9. PMID 18519693 DOI: 10.1158/0008-5472.Can-08-0943 |
0.32 |
|
| 2008 |
Xu L, Shen SS, Hoshida Y, Subramanian A, Ross K, Brunet JP, Wagner SN, Ramaswamy S, Mesirov JP, Hynes RO. Gene expression changes in an animal melanoma model correlate with aggressiveness of human melanoma metastases. Molecular Cancer Research : McR. 6: 760-9. PMID 18505921 DOI: 10.1158/1541-7786.Mcr-07-0344 |
0.561 |
|
| 2007 |
Alexe G, Dalgin GS, Scanfeld D, Tamayo P, Mesirov JP, Ganesan S, Delisi C, Bhanot G. Breast cancer stratification from analysis of micro-array data of micro-dissected specimens. Genome Informatics. International Conference On Genome Informatics. 18: 130-40. PMID 18546481 DOI: 10.11234/Gi1990.18.130 |
0.343 |
|
| 2007 |
Hoshida Y, Brunet JP, Tamayo P, Golub TR, Mesirov JP. Subclass mapping: identifying common subtypes in independent disease data sets. Plos One. 2: e1195. PMID 18030330 DOI: 10.1371/Journal.Pone.0001195 |
0.38 |
|
| 2007 |
Alexe G, Dalgin GS, Scanfeld D, Tamayo P, Mesirov JP, DeLisi C, Harris L, Barnard N, Martel M, Levine AJ, Ganesan S, Bhanot G. High expression of lymphocyte-associated genes in node-negative HER2+ breast cancers correlates with lower recurrence rates. Cancer Research. 67: 10669-76. PMID 18006808 DOI: 10.1158/0008-5472.Can-07-0539 |
0.335 |
|
| 2007 |
Karlsson EK, Baranowska I, Wade CM, Salmon Hillbertz NH, Zody MC, Anderson N, Biagi TM, Patterson N, Pielberg GR, Kulbokas EJ, Comstock KE, Keller ET, Mesirov JP, von Euler H, Kämpe O, et al. Efficient mapping of mendelian traits in dogs through genome-wide association. Nature Genetics. 39: 1321-8. PMID 17906626 DOI: 10.1038/Ng.2007.10 |
0.617 |
|
| 2007 |
Getz G, Höfling H, Mesirov JP, Golub TR, Meyerson M, Tibshirani R, Lander ES. Comment on "The consensus coding sequences of human breast and colorectal cancers". Science (New York, N.Y.). 317: 1500. PMID 17872428 DOI: 10.1126/Science.1138764 |
0.314 |
|
| 2007 |
Subramanian A, Kuehn H, Gould J, Tamayo P, Mesirov JP. GSEA-P: a desktop application for Gene Set Enrichment Analysis. Bioinformatics (Oxford, England). 23: 3251-3. PMID 17644558 DOI: 10.1093/Bioinformatics/Btm369 |
0.561 |
|
| 2007 |
Tamayo P, Scanfeld D, Ebert BL, Gillette MA, Roberts CW, Mesirov JP. Metagene projection for cross-platform, cross-species characterization of global transcriptional states. Proceedings of the National Academy of Sciences of the United States of America. 104: 5959-64. PMID 17389406 DOI: 10.1073/Pnas.0701068104 |
0.358 |
|
| 2006 |
Engels R, Yu T, Burge C, Mesirov JP, DeCaprio D, Galagan JE. Combo: A whole genome comparative browser Bioinformatics. 22: 1782-1783. PMID 16709588 DOI: 10.1093/Bioinformatics/Btl193 |
0.372 |
|
| 2006 |
Gould J, Getz G, Monti S, Reich M, Mesirov JP. Comparative gene marker selection suite. Bioinformatics (Oxford, England). 22: 1924-5. PMID 16709585 DOI: 10.1093/Bioinformatics/Btl196 |
0.361 |
|
| 2005 |
Isakoff MS, Sansam CG, Tamayo P, Subramanian A, Evans JA, Fillmore CM, Wang X, Biegel JA, Pomeroy SL, Mesirov JP, Roberts CW. Inactivation of the Snf5 tumor suppressor stimulates cell cycle progression and cooperates with p53 loss in oncogenic transformation. Proceedings of the National Academy of Sciences of the United States of America. 102: 17745-50. PMID 16301525 DOI: 10.1073/Pnas.0509014102 |
0.557 |
|
| 2005 |
Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, Gillette MA, Paulovich A, Pomeroy SL, Golub TR, Lander ES, Mesirov JP. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proceedings of the National Academy of Sciences of the United States of America. 102: 15545-50. PMID 16199517 DOI: 10.1073/Pnas.0506580102 |
0.607 |
|
| 2005 |
Vinson JP, Jaffe DB, O'Neill K, Karlsson EK, Stange-Thomann N, Anderson S, Mesirov JP, Satoh N, Satou Y, Nusbaum C, Birren B, Galagan JE, Lander ES. Assembly of polymorphic genomes: algorithms and application to Ciona savignyi. Genome Research. 15: 1127-35. PMID 16077012 DOI: 10.1101/Gr.3722605 |
0.627 |
|
| 2005 |
Liefeld T, Reich M, Gould J, Zhang P, Tamayo P, Mesirov JP. GeneCruiser: a web service for the annotation of microarray data. Bioinformatics (Oxford, England). 21: 3681-2. PMID 16030072 DOI: 10.1093/Bioinformatics/Bti587 |
0.384 |
|
| 2005 |
Sweet-Cordero A, Mukherjee S, Subramanian A, You H, Roix JJ, Ladd-Acosta C, Mesirov J, Golub TR, Jacks T. An oncogenic KRAS2 expression signature identified by cross-species gene-expression analysis. Nature Genetics. 37: 48-55. PMID 15608639 DOI: 10.1038/Ng1490 |
0.598 |
|
| 2005 |
Mikkelsen TS, Galagan JE, Mesirov JP. Improving genome annotations using phylogenetic profile anomaly detection. Bioinformatics (Oxford, England). 21: 464-70. PMID 15374867 DOI: 10.1093/Bioinformatics/Bti027 |
0.4 |
|
| 2004 |
Jaillon O, Aury JM, Brunet F, Petit JL, Stange-Thomann N, Mauceli E, Bouneau L, Fischer C, Ozouf-Costaz C, Bernot A, Nicaud S, Jaffe D, Fisher S, Lutfalla G, Dossat C, ... ... Mesirov J, et al. Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype. Nature. 431: 946-57. PMID 15496914 DOI: 10.1038/Nature03025 |
0.373 |
|
| 2004 |
Brunet JP, Tamayo P, Golub TR, Mesirov JP. Metagenes and molecular pattern discovery using matrix factorization. Proceedings of the National Academy of Sciences of the United States of America. 101: 4164-9. PMID 15016911 DOI: 10.1073/Pnas.0308531101 |
0.342 |
|
| 2004 |
Reich M, Ohm K, Angelo M, Tamayo P, Mesirov JP. GeneCluster 2.0: An advanced toolset for bioarray analysis Bioinformatics. 20: 1797-1798. PMID 14988123 DOI: 10.1093/Bioinformatics/Bth138 |
0.328 |
|
| 2003 |
Mootha VK, Lindgren CM, Eriksson KF, Subramanian A, Sihag S, Lehar J, Puigserver P, Carlsson E, Ridderstråle M, Laurila E, Houstis N, Daly MJ, Patterson N, Mesirov JP, Golub TR, et al. PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. Nature Genetics. 34: 267-73. PMID 12808457 DOI: 10.1038/Ng1180 |
0.564 |
|
| 2003 |
Jaffe DB, Butler J, Gnerre S, Mauceli E, Lindblad-Toh K, Mesirov JP, Zody MC, Lander ES. Whole-genome sequence assembly for mammalian genomes: Arachne 2. Genome Research. 13: 91-6. PMID 12529310 DOI: 10.1101/Gr.828403 |
0.347 |
|
| 2003 |
Rifkin R, Mukherjee S, Tamayo P, Ramaswamy S, Yeang CH, Angelo M, Reich M, Poggio T, Lander ES, Golub TR, Mesirov JP. An analytical method for multiclass molecular cancer classification Siam Review. 45: 706-723. DOI: 10.1137/S0036144502411986 |
0.367 |
|
| 2002 |
Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, Agarwal P, Agarwala R, Ainscough R, Alexandersson M, An P, Antonarakis SE, Attwood J, Baertsch R, Bailey J, ... ... Mesirov JP, et al. Initial sequencing and comparative analysis of the mouse genome. Nature. 420: 520-62. PMID 12466850 DOI: 10.1038/Nature01262 |
0.652 |
|
| 2002 |
Pomeroy SL, Tamayo P, Gaasenbeek M, Sturla LM, Angelo M, McLaughlin ME, Kim JY, Goumnerova LC, Black PM, Lau C, Allen JC, Zagzag D, Olson JM, Curran T, Wetmore C, ... ... Mesirov JP, et al. Prediction of central nervous system embryonal tumour outcome based on gene expression. Nature. 415: 436-42. PMID 11807556 DOI: 10.1038/415436A |
0.309 |
|
| 2002 |
Shipp MA, Ross KN, Tamayo P, Weng AP, Kutok JL, Aguiar RC, Gaasenbeek M, Angelo M, Reich M, Pinkus GS, Ray TS, Koval MA, Last KW, Norton A, Lister TA, ... Mesirov J, et al. Diffuse large B-cell lymphoma outcome prediction by gene-expression profiling and supervised machine learning. Nature Medicine. 8: 68-74. PMID 11786909 DOI: 10.1038/Nm0102-68 |
0.313 |
|
| 2001 |
Ramaswamy S, Tamayo P, Rifkin R, Mukherjee S, Yeang CH, Angelo M, Ladd C, Reich M, Latulippe E, Mesirov JP, Poggio T, Gerald W, Loda M, Lander ES, Golub TR. Multiclass cancer diagnosis using tumor gene expression signatures. Proceedings of the National Academy of Sciences of the United States of America. 98: 15149-54. PMID 11742071 DOI: 10.1073/Pnas.211566398 |
0.383 |
|
| 2001 |
Staunton JE, Slonim DK, Coller HA, Tamayo P, Angelo MJ, Park J, Scherf U, Lee JK, Reinhold WO, Weinstein JN, Mesirov JP, Lander ES, Golub TR. Chemosensitivity prediction by transcriptional profiling. Proceedings of the National Academy of Sciences of the United States of America. 98: 10787-92. PMID 11553813 DOI: 10.1073/Pnas.191368598 |
0.378 |
|
| 2001 |
Yeang CH, Ramaswamy S, Tamayo P, Mukherjee S, Rifkin RM, Angelo M, Reich M, Lander E, Mesirov J, Golub T. Molecular classification of multiple tumor types. Bioinformatics (Oxford, England). 17: S316-22. PMID 11473023 DOI: 10.1093/Bioinformatics/17.Suppl_1.S316 |
0.316 |
|
| 2001 |
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, FitzHugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, ... ... Mesirov JP, et al. Initial sequencing and analysis of the human genome. Nature. 409: 860-921. PMID 11237011 DOI: 10.1038/35057062 |
0.569 |
|
| 2001 |
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, Fitzhugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, ... ... Mesirov JP, et al. Erratum: Initial sequencing and analysis of the human genome: International Human Genome Sequencing Consortium (Nature (2001) 409 (860-921)) Nature. 412: 565-566. DOI: 10.1038/35087627 |
0.558 |
|
| 2000 |
Batzoglou S, Pachter L, Mesirov JP, Berger B, Lander ES. Human and mouse gene structure: comparative analysis and application to exon prediction. Genome Research. 10: 950-8. PMID 10899144 DOI: 10.1101/Gr.10.7.950 |
0.373 |
|
| 1999 |
Batzoglou S, Berger B, Mesirov J, Lander ES. Sequencing a genome by walking with clone-end sequences: a mathematical analysis. Genome Research. 9: 1163-74. PMID 10613838 DOI: 10.1101/Gr.9.12.1163 |
0.343 |
|
| 1999 |
Golub TR, Slonim DK, Tamayo P, Huard C, Gaasenbeek M, Mesirov JP, Coller H, Loh ML, Downing JR, Caligiuri MA, Bloomfield CD, Lander ES. Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. Science (New York, N.Y.). 286: 531-7. PMID 10521349 DOI: 10.1126/Science.286.5439.531 |
0.326 |
|
| 1999 |
Tamayo P, Slonim D, Mesirov J, Zhu Q, Kitareewan S, Dmitrovsky E, Lander ES, Golub TR. Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation. Proceedings of the National Academy of Sciences of the United States of America. 96: 2907-12. PMID 10077610 DOI: 10.1073/Pnas.96.6.2907 |
0.375 |
|
| Show low-probability matches. |