| Year |
Citation |
Score |
| 2023 |
Gao Y, Sheng X, Tan D, Kim S, Choi S, Paudel S, Lee T, Yan C, Tan M, Kim KM, Cho SS, Ki SH, Huang H, Zhao Y, Lee S. Identification of Histone Lysine Acetoacetylation as a Dynamic Post-Translational Modification Regulated by HBO1. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). e2300032. PMID 37382194 DOI: 10.1002/advs.202300032 |
0.448 |
|
| 2021 |
Delaney K, Tan M, Zhu Z, Gao J, Dai L, Kim S, Ding J, He M, Halabelian L, Yang L, Nagarajan P, Parthun MR, Lee S, Khochbin S, Zheng YG, ... Zhao Y, et al. Histone lysine methacrylation is a dynamic post-translational modification regulated by HAT1 and SIRT2. Cell Discovery. 7: 122. PMID 34961760 DOI: 10.1038/s41421-021-00344-4 |
0.323 |
|
| 2021 |
Koronowski KB, Greco CM, Huang H, Kim JK, Fribourgh JL, Crosby P, Mathur L, Ren X, Partch CL, Jang C, Qiao F, Zhao Y, Sassone-Corsi P. Ketogenesis impact on liver metabolism revealed by proteomics of lysine β-hydroxybutyrylation. Cell Reports. 36: 109487. PMID 34348140 DOI: 10.1016/j.celrep.2021.109487 |
0.356 |
|
| 2021 |
Gao M, Wang J, Rousseaux S, Tan M, Pan L, Peng L, Wang S, Xu W, Ren J, Liu Y, Spinck M, Barral S, Wang T, Chuffart F, Bourova-Flin E, ... ... Zhao Y, et al. Metabolically controlled histone H4K5 acylation/acetylation ratio drives BRD4 genomic distribution. Cell Reports. 36: 109460. PMID 34320364 DOI: 10.1016/j.celrep.2021.109460 |
0.32 |
|
| 2021 |
Huang H, Zhang D, Weng Y, Delaney K, Tang Z, Yan C, Qi S, Peng C, Cole PA, Roeder RG, Zhao Y. The regulatory enzymes and protein substrates for the lysine β-hydroxybutyrylation pathway. Science Advances. 7. PMID 33627428 DOI: 10.1126/sciadv.abe2771 |
0.441 |
|
| 2020 |
Zhu Z, Han Z, Halabelian L, Yang X, Ding J, Zhang N, Ngo L, Song J, Zeng H, He M, Zhao Y, Arrowsmith CH, Luo M, Bartlett MG, Zheng YG. Identification of lysine isobutyrylation as a new histone modification mark. Nucleic Acids Research. PMID 33313896 DOI: 10.1093/nar/gkaa1176 |
0.336 |
|
| 2019 |
Zhang D, Tang Z, Huang H, Zhou G, Cui C, Weng Y, Liu W, Kim S, Lee S, Perez-Neut M, Ding J, Czyz D, Hu R, Ye Z, He M, ... ... Zhao Y, et al. Metabolic regulation of gene expression by histone lactylation. Nature. 574: 575-580. PMID 31645732 DOI: 10.1038/S41586-019-1678-1 |
0.479 |
|
| 2019 |
Liu H, Yue J, Huang H, Gou X, Chen SY, Zhao Y, Wu X. Correction: Regulation of focal adhesion dynamics and cell motility by the EB2 and Hax1 protein complex. The Journal of Biological Chemistry. 294: 2948. PMID 30796176 DOI: 10.1074/Jbc.Aac119.007825 |
0.436 |
|
| 2018 |
Li S, Xiao F, Zhang J, Sun X, Wang H, Zeng Y, Hu J, Tang F, Gu J, Zhao Y, Jin Y, Liao B. Disruption of OCT4 Ubiquitination Increases OCT4 Protein Stability and ASH2L-B-Mediated H3K4 Methylation Promoting Pluripotency Acquisition. Stem Cell Reports. PMID 30269953 DOI: 10.1016/J.Stemcr.2018.09.001 |
0.394 |
|
| 2018 |
Shiota H, Barral S, Buchou T, Tan M, Couté Y, Charbonnier G, Reynoird N, Boussouar F, Gérard M, Zhu M, Bargier L, Puthier D, Chuffart F, Bourova-Flin E, Picaud S, ... ... Zhao Y, et al. Nut Directs p300-Dependent, Genome-Wide H4 Hyperacetylation in Male Germ Cells. Cell Reports. 24: 3477-3487.e6. PMID 30257209 DOI: 10.1016/J.Celrep.2018.08.069 |
0.376 |
|
| 2018 |
Huang H, Zhang D, Wang Y, Perez-Neut M, Han Z, Zheng YG, Hao Q, Zhao Y. Lysine benzoylation is a histone mark regulated by SIRT2. Nature Communications. 9: 3374. PMID 30154464 DOI: 10.1038/S41467-018-05567-W |
0.484 |
|
| 2018 |
Bhat S, Hwang Y, Gibson MD, Morgan MT, Taverna SD, Zhao Y, Wolberger C, Poirier MG, Cole PA. Hydrazide Mimics for Protein Lysine Acylation to Assess Nucleosome Dynamics and Deubiquitinase Action. Journal of the American Chemical Society. PMID 29991262 DOI: 10.1021/Jacs.8B03572 |
0.471 |
|
| 2018 |
Huang H, Wang DL, Zhao Y. Quantitative Crotonylome Analysis Expands the Roles of p300 in the Regulation of Lysine Crotonylation Pathway. Proteomics. e1700230. PMID 29932303 DOI: 10.1002/Pmic.201700230 |
0.468 |
|
| 2018 |
Xu JY, Xu Y, Xu Z, Zhai LH, Ye Y, Zhao Y, Chu X, Tan M, Ye BC. Protein Acylation is a General Regulatory Mechanism in Biosynthetic Pathway of Acyl-CoA-Derived Natural Products. Cell Chemical Biology. PMID 29887264 DOI: 10.1016/J.Chembiol.2018.05.005 |
0.336 |
|
| 2018 |
Huang H, Tang S, Ji M, Tang Z, Shimada M, Liu X, Qi S, Locasale JW, Roeder RG, Zhao Y, Li X. p300-Mediated Lysine 2-Hydroxyisobutyrylation Regulates Glycolysis. Molecular Cell. 70: 984. PMID 29883613 DOI: 10.1016/j.molcel.2018.05.035 |
0.306 |
|
| 2018 |
Huang H, Tang S, Ji M, Tang Z, Shimada M, Liu X, Qi S, Locasale JW, Roeder RG, Zhao Y, Li X. EP300-Mediated Lysine 2-Hydroxyisobutyrylation Regulates Glycolysis. Molecular Cell. 70: 663-678.e6. PMID 29775581 DOI: 10.1016/J.Molcel.2018.04.011 |
0.501 |
|
| 2018 |
Sabari BR, Tang Z, Huang H, Yong-Gonzalez V, Molina H, Kong HE, Dai L, Shimada M, Cross JR, Zhao Y, Roeder RG, Allis CD. Intracellular Crotonyl-CoA Stimulates Transcription through p300-Catalyzed Histone Crotonylation. Molecular Cell. 69: 533. PMID 29395068 DOI: 10.1016/j.molcel.2018.01.013 |
0.341 |
|
| 2018 |
Han Z, Wu H, Kim S, Yang X, Li Q, Huang H, Cai H, Bartlett MG, Dong A, Zeng H, Brown PJ, Yang X, Arrowsmith CH, Zhao Y, Zheng YG. Revealing the Protein Propionylation Activity of the Histone Acetyltransferase Males absent on the first (MOF). The Journal of Biological Chemistry. PMID 29321206 DOI: 10.1074/Jbc.Ra117.000529 |
0.52 |
|
| 2017 |
Wu JY, Xiang S, Zhang M, Fang B, Huang H, Kwon OK, Zhao Y, Yang Z, Bai W, Bepler G, Zhang XM. Histone deacetylase 6 (HDAC6) deacetylates extracellular signal-regulated kinase 1 (ERK1) and thereby stimulates ERK1 activity. The Journal of Biological Chemistry. PMID 29259132 DOI: 10.1074/Jbc.M117.795955 |
0.478 |
|
| 2017 |
Huang H, Luo Z, Qi S, Huang J, Xu P, Wang X, Gao L, Li F, Wang J, Zhao W, Gu W, Chen Z, Dai L, Dai J, Zhao Y. Landscape of the regulatory elements for lysine 2-hydroxyisobutyrylation pathway. Cell Research. PMID 29192674 DOI: 10.1038/Cr.2017.149 |
0.548 |
|
| 2017 |
Huang J, Luo Z, Ying W, Cao Q, Huang H, Dong J, Wu Q, Zhao Y, Qian X, Dai J. 2-Hydroxyisobutyrylation on histone H4K8 is regulated by glucose homeostasis in Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences of the United States of America. PMID 28768809 DOI: 10.1073/Pnas.1700796114 |
0.493 |
|
| 2017 |
Liu X, Wei W, Liu Y, Yang X, Wu J, Zhang Y, Zhang Q, Shi T, Du JX, Zhao Y, Lei M, Zhou JQ, Li J, Wong J. MOF as an evolutionarily conserved histone crotonyltransferase and transcriptional activation by histone acetyltransferase-deficient and crotonyltransferase-competent CBP/p300. Cell Discovery. 3: 17016. PMID 28580166 DOI: 10.1038/Celldisc.2017.16 |
0.404 |
|
| 2017 |
Lee P, Jiang S, Li Y, Yue J, Gou X, Chen SY, Zhao Y, Schober M, Tan M, Wu X. Phosphorylation of Pkp1 by RIPK4 regulates epidermal differentiation and skin tumorigenesis. The Embo Journal. PMID 28507225 DOI: 10.15252/Embj.201695679 |
0.334 |
|
| 2017 |
Nie L, Shuai L, Zhu M, Liu P, Xie ZF, Jiang S, Jiang HW, Li J, Zhao Y, Li JY, Tan M. The Landscape of Histone Modifications in a High-Fat-Diet-Induced Obese (DIO) Mouse Model. Molecular & Cellular Proteomics : McP. PMID 28450421 DOI: 10.1074/Mcp.M117.067553 |
0.377 |
|
| 2016 |
Sabari BR, Zhang D, Allis CD, Zhao Y. Metabolic regulation of gene expression through histone acylations. Nature Reviews. Molecular Cell Biology. PMID 27924077 DOI: 10.1038/Nrm.2016.140 |
0.418 |
|
| 2016 |
Kaczmarska Z, Ortega E, Goudarzi A, Huang H, Kim S, Márquez JA, Zhao Y, Khochbin S, Panne D. Structure of p300 in complex with acyl-CoA variants. Nature Chemical Biology. PMID 27820805 DOI: 10.1038/Nchembio.2217 |
0.435 |
|
| 2016 |
Sun M, Xu JY, Wu Z, Zhai L, Liu C, Cheng Z, Xu G, Tao S, Ye BC, Zhao Y, Tan M. Characterization of Protein Lysine Propionylation in Escherichia coli: Global Profiling, Dynamic Change and Enzymatic Regulation. Journal of Proteome Research. PMID 27804304 DOI: 10.1021/Acs.Jproteome.6B00798 |
0.414 |
|
| 2016 |
Xiong X, Panchenko T, Yang S, Zhao S, Yan P, Zhang W, Xie W, Li Y, Zhao Y, Allis CD, Li H. Selective recognition of histone crotonylation by double PHD fingers of MOZ and DPF2. Nature Chemical Biology. PMID 27775714 DOI: 10.1038/Nchembio.2218 |
0.394 |
|
| 2016 |
Aramsangtienchai P, Spiegelman NA, He B, Miller SP, Dai L, Zhao Y, Lin H. HDAC8 catalyzes the hydrolysis of long chain fatty acyl lysine. Acs Chemical Biology. PMID 27459069 DOI: 10.1021/Acschembio.6B00396 |
0.413 |
|
| 2016 |
Qian L, Nie L, Chen M, Liu P, Zhu J, Zhai L, Tao SC, Cheng Z, Zhao Y, Tan M. Global Profiling of Protein Lysine Malonylation in Escherichia coli Reveals Its Role in Energy Metabolism. Journal of Proteome Research. PMID 27183143 DOI: 10.1021/Acs.Jproteome.6B00264 |
0.386 |
|
| 2016 |
Xie Z, Zhang D, Chung D, Tang Z, Huang H, Dai L, Qi S, Li J, Colak G, Chen Y, Xia C, Peng C, Ruan H, Kirkey M, Wang D, ... ... Zhao Y, et al. Metabolic Regulation of Gene Expression by Histone Lysine β-Hydroxybutyrylation. Molecular Cell. 62: 194-206. PMID 27105115 DOI: 10.1016/J.Molcel.2016.03.036 |
0.468 |
|
| 2016 |
Li Y, Sabari BR, Panchenko T, Wen H, Zhao D, Guan H, Wan L, Huang H, Tang Z, Zhao Y, Roeder RG, Shi X, Allis CD, Li H. Molecular Coupling of Histone Crotonylation and Active Transcription by AF9 YEATS Domain. Molecular Cell. 62: 181-193. PMID 27105114 DOI: 10.1016/J.Molcel.2016.03.028 |
0.473 |
|
| 2016 |
Goudarzi A, Zhang D, Huang H, Barral S, Kwon OK, Qi S, Tang Z, Buchou T, Vitte AL, He T, Cheng Z, Montellier E, Gaucher J, Curtet S, Debernardi A, ... ... Zhao Y, et al. Dynamic Competing Histone H4 K5K8 Acetylation and Butyrylation Are Hallmarks of Highly Active Gene Promoters. Molecular Cell. 62: 169-180. PMID 27105113 DOI: 10.1016/J.Molcel.2016.03.014 |
0.466 |
|
| 2016 |
Zhao D, Guan H, Zhao S, Mi W, Wen H, Li Y, Zhao Y, Allis CD, Shi X, Li H. YEATS2 is a selective histone crotonylation reader. Cell Research. PMID 27103431 DOI: 10.1038/Cr.2016.49 |
0.322 |
|
| 2016 |
Liu K, Li F, Han H, Chen Y, Mao Z, Luo J, Zhao Y, Zheng B, Gu W, Zhao W. Parkin Regulates the Activity of Pyruvate Kinase M2. The Journal of Biological Chemistry. PMID 26975375 DOI: 10.1074/Jbc.M115.703066 |
0.333 |
|
| 2016 |
Washburn MP, Zhao Y, Garcia BA. Reshaping the chromatin and epigenetic landscapes with quantitative mass spectrometry. Molecular & Cellular Proteomics : McP. PMID 26814188 DOI: 10.1074/Mcp.E116.058602 |
0.35 |
|
| 2016 |
Respuela P, Nikolić M, Tan M, Frommolt P, Zhao Y, Wysocka J, Rada-Iglesias A. Foxd3 Promotes Exit from Naive Pluripotency through Enhancer Decommissioning and Inhibits Germline Specification. Cell Stem Cell. 18: 118-133. PMID 26748758 DOI: 10.1016/J.Stem.2015.09.010 |
0.32 |
|
| 2015 |
Martínez-Reyes I, Diebold LP, Kong H, Schieber M, Huang H, Hensley CT, Mehta MM, Wang T, Santos JH, Woychik R, Dufour E, Spelbrink JN, Weinberg SE, Zhao Y, DeBerardinis RJ, et al. TCA Cycle and Mitochondrial Membrane Potential Are Necessary for Diverse Biological Functions. Molecular Cell. PMID 26725009 DOI: 10.1016/J.Molcel.2015.12.002 |
0.392 |
|
| 2015 |
Head SA, Shi W, Zhao L, Gorshkov K, Pasunooti K, Chen Y, Deng Z, Li RJ, Shim JS, Tan W, Hartung T, Zhang J, Zhao Y, Colombini M, Liu JO. Antifungal drug itraconazole targets VDAC1 to modulate the AMPK/mTOR signaling axis in endothelial cells. Proceedings of the National Academy of Sciences of the United States of America. PMID 26655341 DOI: 10.1073/Pnas.1512867112 |
0.329 |
|
| 2015 |
Liu H, Yue J, Huang H, Gou X, Chen SY, Zhao Y, Wu X. Regulation of Focal Adhesion Dynamics and Cell Motility by EB2 and Hax1 Complex. The Journal of Biological Chemistry. PMID 26527684 DOI: 10.1074/Jbc.M115.671743 |
0.447 |
|
| 2015 |
Morozumi Y, Boussouar F, Tan M, Chaikuad A, Jamshidikia M, Colak G, He H, Nie L, Petosa C, de Dieuleveult M, Curtet S, Vitte AL, Rabatel C, Debernardi A, Cosset FL, ... ... Zhao Y, et al. Atad2 is a generalist facilitator of chromatin dynamics in embryonic stem cells. Journal of Molecular Cell Biology. PMID 26459632 DOI: 10.1093/Jmcb/Mjv060 |
0.408 |
|
| 2015 |
Kwon OK, Kim S, Lee YM, Lee YH, Bae YS, Kim JY, Peng X, Cheng Z, Zhao Y, Lee S. Global analysis of phosphoproteome dynamics in embryonic development of zebrafish (Danio rerio). Proteomics. PMID 26449285 DOI: 10.1002/Pmic.201500017 |
0.332 |
|
| 2015 |
Cluntun AA, Huang H, Dai L, Liu X, Zhao Y, Locasale JW. The rate of glycolysis quantitatively mediates specific histone acetylation sites. Cancer & Metabolism. 3: 10. PMID 26401273 DOI: 10.1186/S40170-015-0135-3 |
0.739 |
|
| 2015 |
Zhao Y, Garcia BA. Comprehensive Catalog of Currently Documented Histone Modifications. Cold Spring Harbor Perspectives in Biology. 7: a025064. PMID 26330523 DOI: 10.1101/Cshperspect.A025064 |
0.39 |
|
| 2015 |
Colak G, Pougovkina O, Dai L, Tan M, Te Brinke H, Huang H, Cheng Z, Park J, Wan X, Liu X, Yue WW, Wanders RJ, Locasale JW, Lombard DB, de Boer VC, ... Zhao Y, et al. Proteomic and biochemical studies of lysine malonylation suggests its malonic aciduria-associated regulatory role in mitochondrial function and fatty acid oxidation. Molecular & Cellular Proteomics : McP. PMID 26320211 DOI: 10.1074/Mcp.M115.048850 |
0.479 |
|
| 2015 |
Torres MJ, Pandita RK, Kulak O, Kumar R, Formstecher E, Horikoshi N, Mujoo K, Hunt CR, Zhao Y, Lum L, Zaman A, Yeaman C, White MA, Pandita TK. Role of the Exocyst Complex Component Sec6/8 in Genomic Stability. Molecular and Cellular Biology. 35: 3633-45. PMID 26283729 DOI: 10.1128/Mcb.00768-15 |
0.311 |
|
| 2015 |
Kang Y, Zhou XE, Gao X, He Y, Liu W, Ishchenko A, Barty A, White TA, Yefanov O, Han GW, Xu Q, de Waal PW, Ke J, Tan MH, Zhang C, ... ... Zhao Y, et al. Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser. Nature. PMID 26200343 DOI: 10.1038/Nature14656 |
0.303 |
|
| 2015 |
Sabari BR, Tang Z, Huang H, Yong-Gonzalez V, Molina H, Kong HE, Dai L, Shimada M, Cross JR, Zhao Y, Roeder RG, Allis CD. Intracellular crotonyl-CoA stimulates transcription through p300-catalyzed histone crotonylation. Molecular Cell. 58: 203-15. PMID 25818647 DOI: 10.1016/J.Molcel.2015.02.029 |
0.491 |
|
| 2015 |
Hirschey MD, Zhao Y. Metabolic Regulation by Lysine Malonylation, Succinylation, and Glutarylation. Molecular & Cellular Proteomics : McP. 14: 2308-15. PMID 25717114 DOI: 10.1074/Mcp.R114.046664 |
0.449 |
|
| 2015 |
Huang H, Lin S, Garcia BA, Zhao Y. Quantitative proteomic analysis of histone modifications. Chemical Reviews. 115: 2376-418. PMID 25688442 DOI: 10.1021/Cr500491U |
0.523 |
|
| 2015 |
Wu Z, Cheng Z, Sun M, Wan X, Liu P, He T, Tan M, Zhao Y. A chemical proteomics approach for global analysis of lysine monomethylome profiling. Molecular & Cellular Proteomics : McP. 14: 329-39. PMID 25505155 DOI: 10.1074/Mcp.M114.044255 |
0.464 |
|
| 2015 |
He QL, Titov DV, Li J, Tan M, Ye Z, Zhao Y, Romo D, Liu JO. Covalent modification of a cysteine residue in the XPB subunit of the general transcription factor TFIIH through single epoxide cleavage of the transcription inhibitor triptolide. Angewandte Chemie (International Ed. in English). 54: 1859-63. PMID 25504624 DOI: 10.1002/Anie.201408817 |
0.36 |
|
| 2014 |
Huang H, Sabari BR, Garcia BA, Allis CD, Zhao Y. SnapShot: histone modifications. Cell. 159: 458-458.e1. PMID 25303536 DOI: 10.1016/J.Cell.2014.09.037 |
0.503 |
|
| 2014 |
Xu G, Wang J, Wu Z, Qian L, Dai L, Wan X, Tan M, Zhao Y, Wu Y. SAHA regulates histone acetylation, Butyrylation, and protein expression in neuroblastoma. Journal of Proteome Research. 13: 4211-9. PMID 25160476 DOI: 10.1021/Pr500497E |
0.48 |
|
| 2014 |
Tang S, Huang G, Fan W, Chen Y, Ward JM, Xu X, Xu Q, Kang A, McBurney MW, Fargo DC, Hu G, Baumgart-Vogt E, Zhao Y, Li X. SIRT1-mediated deacetylation of CRABPII regulates cellular retinoic acid signaling and modulates embryonic stem cell differentiation. Molecular Cell. 55: 843-55. PMID 25155613 DOI: 10.1016/J.Molcel.2014.07.011 |
0.305 |
|
| 2014 |
Tan M, Peng C, Anderson KA, Chhoy P, Xie Z, Dai L, Park J, Chen Y, Huang H, Zhang Y, Ro J, Wagner GR, Green MF, Madsen AS, Schmiesing J, ... ... Zhao Y, et al. Lysine glutarylation is a protein posttranslational modification regulated by SIRT5. Cell Metabolism. 19: 605-17. PMID 24703693 DOI: 10.1016/J.Cmet.2014.03.014 |
0.531 |
|
| 2014 |
Dai L, Peng C, Montellier E, Lu Z, Chen Y, Ishii H, Debernardi A, Buchou T, Rousseaux S, Jin F, Sabari BR, Deng Z, Allis CD, Ren B, Khochbin S, ... Zhao Y, et al. Lysine 2-hydroxyisobutyrylation is a widely distributed active histone mark. Nature Chemical Biology. 10: 365-70. PMID 24681537 DOI: 10.1038/Nchembio.1497 |
0.422 |
|
| 2014 |
Luo X, Wang B, Tang F, Zhang J, Zhao Y, Li H, Jin Y. Wwp2 targets SRG3, a scaffold protein of the SWI/SNF-like BAF complex, for ubiquitination and degradation. Biochemical and Biophysical Research Communications. 443: 1048-53. PMID 24365151 DOI: 10.1016/J.Bbrc.2013.12.089 |
0.428 |
|
| 2014 |
Boland ML, Huang H, Shah R, Ali A, Zhao Y, Rhodes CJ, Macleod KF. Abstract 4324: BNip3 connects energy sensing to hepatic lipid metabolism and mitophagy Cancer Research. 74: 4324-4324. DOI: 10.1158/1538-7445.Am2014-4324 |
0.318 |
|
| 2014 |
Zhang Y, Wu Z, Wan X, Liu P, Zhang J, Ye Y, Zhao Y, Tan M. Comprehensive profiling of lysine acetylome in Staphylococcus aureus Science China Chemistry. 57: 732-738. DOI: 10.1007/S11426-014-5100-4 |
0.392 |
|
| 2013 |
Colak G, Xie Z, Zhu AY, Dai L, Lu Z, Zhang Y, Wan X, Chen Y, Cha YH, Lin H, Zhao Y, Tan M. Identification of lysine succinylation substrates and the succinylation regulatory enzyme CobB in Escherichia coli. Molecular & Cellular Proteomics : McP. 12: 3509-20. PMID 24176774 DOI: 10.1074/Mcp.M113.031567 |
0.427 |
|
| 2013 |
Chen Y, Colak G, Zhao Y. SILAC-based quantification of Sirt1-responsive lysine acetylome. Methods in Molecular Biology (Clifton, N.J.). 1077: 105-20. PMID 24014402 DOI: 10.1007/978-1-62703-637-5_7 |
0.362 |
|
| 2013 |
Hattori T, Taft JM, Swist KM, Luo H, Witt H, Slattery M, Koide A, Ruthenburg AJ, Krajewski K, Strahl BD, White KP, Farnham PJ, Zhao Y, Koide S. Recombinant antibodies to histone post-translational modifications. Nature Methods. 10: 992-5. PMID 23955773 DOI: 10.1038/Nmeth.2605 |
0.349 |
|
| 2013 |
Montellier E, Boussouar F, Rousseaux S, Zhang K, Buchou T, Fenaille F, Shiota H, Debernardi A, Héry P, Curtet S, Jamshidikia M, Barral S, Holota H, Bergon A, Lopez F, ... ... Zhao Y, et al. Chromatin-to-nucleoprotamine transition is controlled by the histone H2B variant TH2B. Genes & Development. 27: 1680-92. PMID 23884607 DOI: 10.1101/Gad.220095.113 |
0.365 |
|
| 2013 |
Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y. SIRT5-mediated lysine desuccinylation impacts diverse metabolic pathways. Molecular Cell. 50: 919-30. PMID 23806337 DOI: 10.1016/J.Molcel.2013.06.001 |
0.435 |
|
| 2013 |
Lee S, Tan M, Dai L, Kwon OK, Yang JS, Zhao Y, Chen Y. MS/MS of synthetic peptide is not sufficient to confirm new types of protein modifications. Journal of Proteome Research. 12: 1007-13. PMID 23268713 DOI: 10.1021/Pr300667E |
0.321 |
|
| 2013 |
Liao B, Zhong X, Xu H, Xiao F, Fang Z, Gu J, Chen Y, Zhao Y, Jin Y. Itch, an E3 ligase of Oct4, is required for embryonic stem cell self-renewal and pluripotency induction. Journal of Cellular Physiology. 228: 1443-51. PMID 23255053 DOI: 10.1002/Jcp.24297 |
0.341 |
|
| 2012 |
Qiang L, Wang L, Kon N, Zhao W, Lee S, Zhang Y, Rosenbaum M, Zhao Y, Gu W, Farmer SR, Accili D. Brown remodeling of white adipose tissue by SirT1-dependent deacetylation of Pparγ. Cell. 150: 620-32. PMID 22863012 DOI: 10.1016/J.Cell.2012.06.027 |
0.304 |
|
| 2012 |
Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y. Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways. Molecular & Cellular Proteomics : McP. 11: 1048-62. PMID 22826441 DOI: 10.1074/Mcp.M112.019547 |
0.438 |
|
| 2012 |
Choi MC, Cohen TJ, Barrientos T, Wang B, Li M, Simmons BJ, Yang JS, Cox GA, Zhao Y, Yao TP. A direct HDAC4-MAP kinase crosstalk activates muscle atrophy program. Molecular Cell. 47: 122-32. PMID 22658415 DOI: 10.1016/J.Molcel.2012.04.025 |
0.31 |
|
| 2012 |
Xie Z, Dai J, Dai L, Tan M, Cheng Z, Wu Y, Boeke JD, Zhao Y. Lysine succinylation and lysine malonylation in histones. Molecular & Cellular Proteomics : McP. 11: 100-7. PMID 22389435 DOI: 10.1074/Mcp.M111.015875 |
0.441 |
|
| 2012 |
Montellier E, Rousseaux S, Zhao Y, Khochbin S. Histone crotonylation specifically marks the haploid male germ cell gene expression program: post-meiotic male-specific gene expression. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 34: 187-93. PMID 22170506 DOI: 10.1002/Bies.201100141 |
0.32 |
|
| 2011 |
Lu Z, Cheng Z, Zhao Y, Volchenboum SL. Bioinformatic analysis and post-translational modification crosstalk prediction of lysine acetylation. Plos One. 6: e28228. PMID 22164248 DOI: 10.1371/Journal.Pone.0028228 |
0.351 |
|
| 2011 |
Tan M, Luo H, Lee S, Jin F, Yang JS, Montellier E, Buchou T, Cheng Z, Rousseaux S, Rajagopal N, Lu Z, Ye Z, Zhu Q, Wysocka J, Ye Y, ... ... Zhao Y, et al. Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification. Cell. 146: 1016-28. PMID 21925322 DOI: 10.1016/J.Cell.2011.08.008 |
0.39 |
|
| 2011 |
Peng C, Lu Z, Xie Z, Cheng Z, Chen Y, Tan M, Luo H, Zhang Y, He W, Yang K, Zwaans BM, Tishkoff D, Ho L, Lombard D, He TC, ... ... Zhao Y, et al. The first identification of lysine malonylation substrates and its regulatory enzyme. Molecular & Cellular Proteomics : McP. 10: M111.012658. PMID 21908771 DOI: 10.1074/Mcp.M111.012658 |
0.473 |
|
| 2011 |
Lu JY, Lin YY, Sheu JC, Wu JT, Lee FJ, Chen Y, Lin MI, Chiang FT, Tai TY, Berger SL, Zhao Y, Tsai KS, Zhu H, Chuang LM, Boeke JD. Acetylation of yeast AMPK controls intrinsic aging independently of caloric restriction. Cell. 146: 969-79. PMID 21906795 DOI: 10.1016/J.Cell.2011.07.044 |
0.411 |
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| 2011 |
Ghosh S, Vassilev AP, Zhang J, Zhao Y, DePamphilis ML. Assembly of the human origin recognition complex occurs through independent nuclear localization of its components. The Journal of Biological Chemistry. 286: 23831-41. PMID 21555516 DOI: 10.1074/Jbc.M110.215988 |
0.363 |
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| 2011 |
Li X, Wang QJ, Pan N, Lee S, Zhao Y, Chait BT, Yue Z. Phosphorylation-dependent 14-3-3 binding to LRRK2 is impaired by common mutations of familial Parkinson's disease. Plos One. 6: e17153. PMID 21390248 DOI: 10.1371/Journal.Pone.0017153 |
0.443 |
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| 2011 |
Chu CW, Hou F, Zhang J, Phu L, Loktev AV, Kirkpatrick DS, Jackson PK, Zhao Y, Zou H. A novel acetylation of β-tubulin by San modulates microtubule polymerization via down-regulating tubulin incorporation. Molecular Biology of the Cell. 22: 448-56. PMID 21177827 DOI: 10.1091/Mbc.E10-03-0203 |
0.334 |
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| 2011 |
Zhang Z, Tan M, Xie Z, Dai L, Chen Y, Zhao Y. Identification of lysine succinylation as a new post-translational modification. Nature Chemical Biology. 7: 58-63. PMID 21151122 DOI: 10.1038/Nchembio.495 |
0.436 |
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| 2011 |
Song H, Li CW, Labaff AM, Lim SO, Li LY, Kan SF, Chen Y, Zhang K, Lang J, Xie X, Wang Y, Huo LF, Hsu SC, Chen X, Zhao Y, et al. Acetylation of EGF receptor contributes to tumor cell resistance to histone deacetylase inhibitors Biochemical and Biophysical Research Communications. 404: 68-73. PMID 21094134 DOI: 10.1016/J.Bbrc.2010.11.064 |
0.331 |
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| 2011 |
Li X, Wang QJ, Pan N, Lee S, Zhao Y, Chait BT, Yue Z. Correction: Phosphorylation-Dependent 14-3-3 Binding to LRRK2 Is Impaired by Common Mutations of Familial Parkinson's Disease Plos One. 6. DOI: 10.1371/annotation/e66e7e90-9503-46b8-91f9-abe4d5056ba1 |
0.379 |
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| 2010 |
Lee S, Chen Y, Luo H, Wu AA, Wilde M, Schumacker PT, Zhao Y. The first global screening of protein substrates bearing protein-bound 3,4-Dihydroxyphenylalanine in Escherichia coli and human mitochondria. Journal of Proteome Research. 9: 5705-14. PMID 20818827 DOI: 10.1021/Pr1005179 |
0.434 |
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| 2010 |
Heise CJ, Xu BE, Deaton SL, Cha SK, Cheng CJ, Earnest S, Sengupta S, Juang YC, Stippec S, Xu Y, Zhao Y, Huang CL, Cobb MH. Serum and glucocorticoid-induced kinase (SGK) 1 and the epithelial sodium channel are regulated by multiple with no lysine (WNK) family members. The Journal of Biological Chemistry. 285: 25161-7. PMID 20525693 DOI: 10.1074/Jbc.M110.103432 |
0.37 |
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| 2010 |
Kuo HP, Lee DF, Chen CT, Liu M, Chou CK, Lee HJ, Du Y, Xie X, Wei Y, Xia W, Weihua Z, Yang JY, Yen CJ, Huang TH, Tan M, ... ... Zhao Y, et al. ARD1 stabilization of TSC2 suppresses tumorigenesis through the mTOR signaling pathway. Science Signaling. 3: ra9. PMID 20145209 DOI: 10.1126/Scisignal.2000590 |
0.315 |
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| 2010 |
Bajpai R, Chen DA, Rada-Iglesias A, Zhang J, Xiong Y, Helms J, Chang CP, Zhao Y, Swigut T, Wysocka J. CHD7 cooperates with PBAF to control multipotent neural crest formation. Nature. 463: 958-62. PMID 20130577 DOI: 10.1038/Nature08733 |
0.342 |
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| 2010 |
Li L, Sun L, Gao F, Jiang J, Yang Y, Li C, Gu J, Wei Z, Yang A, Lu R, Ma Y, Tang F, Kwon SW, Zhao Y, Li J, et al. Stk40 links the pluripotency factor Oct4 to the Erk/MAPK pathway and controls extraembryonic endoderm differentiation. Proceedings of the National Academy of Sciences of the United States of America. 107: 1402-7. PMID 20080709 DOI: 10.1073/Pnas.0905657107 |
0.31 |
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| 2010 |
Zhang K, Chen Y, Zhang Z, Tao S, Zhu H, Zhao Y. Unrestrictive identification of non-phosphorylation PTMs in yeast kinases by MS and PTMap. Proteomics. 10: 896-903. PMID 20049863 DOI: 10.1002/Pmic.200900510 |
0.374 |
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| 2010 |
Zhang J, Chen Y, Zhang Z, Xing G, Wysocka J, Zhao Y. MS/MS/MS reveals false positive identification of histone serine methylation. Journal of Proteome Research. 9: 585-94. PMID 19877717 DOI: 10.1021/Pr900864S |
0.33 |
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| 2009 |
Peng JC, Valouev A, Swigut T, Zhang J, Zhao Y, Sidow A, Wysocka J. Jarid2/Jumonji coordinates control of PRC2 enzymatic activity and target gene occupancy in pluripotent cells. Cell. 139: 1290-302. PMID 20064375 DOI: 10.1016/J.Cell.2009.12.002 |
0.396 |
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| 2009 |
Rosse C, Formstecher E, Boeckeler K, Zhao Y, Kremerskothen J, White MD, Camonis JH, Parker PJ. An aPKC-exocyst complex controls paxillin phosphorylation and migration through localised JNK1 activation. Plos Biology. 7: e1000235. PMID 19885391 DOI: 10.1371/Journal.Pbio.1000235 |
0.332 |
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| 2009 |
Zhao Y, Jensen ON. Modification-specific proteomics: strategies for characterization of post-translational modifications using enrichment techniques. Proteomics. 9: 4632-41. PMID 19743430 DOI: 10.1002/Pmic.200900398 |
0.419 |
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| 2009 |
Basu A, Rose KL, Zhang J, Beavis RC, Ueberheide B, Garcia BA, Chait B, Zhao Y, Hunt DF, Segal E, Allis CD, Hake SB. Proteome-wide prediction of acetylation substrates. Proceedings of the National Academy of Sciences of the United States of America. 106: 13785-90. PMID 19666589 DOI: 10.1073/Pnas.0906801106 |
0.554 |
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| 2009 |
Gao F, Kwon SW, Zhao Y, Jin Y. PARP1 poly(ADP-ribosyl)ates Sox2 to control Sox2 protein levels and FGF4 expression during embryonic stem cell differentiation. The Journal of Biological Chemistry. 284: 22263-73. PMID 19531481 DOI: 10.1074/Jbc.M109.033118 |
0.366 |
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| 2009 |
Li H, Wang B, Yang A, Lu R, Wang W, Zhou Y, Shi G, Kwon SW, Zhao Y, Jin Y. Ly-1 antibody reactive clone is an important nucleolar protein for control of self-renewal and differentiation in embryonic stem cells. Stem Cells (Dayton, Ohio). 27: 1244-54. PMID 19489080 DOI: 10.1002/Stem.55 |
0.328 |
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| 2009 |
Chen Y, Zhang J, Xing G, Zhao Y. Mascot-derived false positive peptide identifications revealed by manual analysis of tandem mass spectra. Journal of Proteome Research. 8: 3141-7. PMID 19368407 DOI: 10.1021/Pr900172V |
0.304 |
|
| 2009 |
Chan DW, Wang Y, Wu M, Wong J, Qin J, Zhao Y. Unbiased proteomic screen for binding proteins to modified lysines on histone H3. Proteomics. 9: 2343-54. PMID 19337993 DOI: 10.1002/Pmic.200800600 |
0.441 |
|
| 2009 |
Lin YY, Lu JY, Zhang J, Walter W, Dang W, Wan J, Tao SC, Qian J, Zhao Y, Boeke JD, Berger SL, Zhu H. Protein acetylation microarray reveals that NuA4 controls key metabolic target regulating gluconeogenesis. Cell. 136: 1073-84. PMID 19303850 DOI: 10.1016/J.Cell.2009.01.033 |
0.439 |
|
| 2009 |
Chen Y, Chen W, Cobb MH, Zhao Y. PTMap--a sequence alignment software for unrestricted, accurate, and full-spectrum identification of post-translational modification sites. Proceedings of the National Academy of Sciences of the United States of America. 106: 761-6. PMID 19136633 DOI: 10.1073/Pnas.0811739106 |
0.33 |
|
| 2009 |
Zhang K, Chen Y, Zhang Z, Zhao Y. Identification and verification of lysine propionylation and butyrylation in yeast core histones using PTMap software. Journal of Proteome Research. 8: 900-6. PMID 19113941 DOI: 10.1021/Pr8005155 |
0.442 |
|
| 2009 |
Chen W, Chen Y, Xu BE, Juang YC, Stippec S, Zhao Y, Cobb MH. Regulation of a third conserved phosphorylation site in SGK1. The Journal of Biological Chemistry. 284: 3453-60. PMID 19068477 DOI: 10.1074/Jbc.M807502200 |
0.357 |
|
| 2009 |
Chon H, Vassilev A, DePamphilis ML, Zhao Y, Zhang J, Burgers PM, Crouch RJ, Cerritelli SM. Contributions of the two accessory subunits, RNASEH2B and RNASEH2C, to the activity and properties of the human RNase H2 complex. Nucleic Acids Research. 37: 96-110. PMID 19015152 DOI: 10.1093/Nar/Gkn913 |
0.322 |
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| 2009 |
Cheng Z, Tang Y, Chen Y, Kim S, Liu H, Li SS, Gu W, Zhao Y. Molecular characterization of propionyllysines in non-histone proteins. Molecular & Cellular Proteomics : McP. 8: 45-52. PMID 18753126 DOI: 10.1074/Mcp.M800224-Mcp200 |
0.492 |
|
| 2009 |
Zhang J, Sprung R, Pei J, Tan X, Kim S, Zhu H, Liu CF, Grishin NV, Zhao Y. Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli. Molecular & Cellular Proteomics : McP. 8: 215-25. PMID 18723842 DOI: 10.1074/Mcp.M800187-Mcp200 |
0.475 |
|
| 2008 |
Xing G, Zhang J, Chen Y, Zhao Y. Identification of four novel types of in vitro protein modifications. Journal of Proteome Research. 7: 4603-8. PMID 18767873 DOI: 10.1021/Pr800456Q |
0.395 |
|
| 2008 |
Lin YY, Qi Y, Lu JY, Pan X, Yuan DS, Zhao Y, Bader JS, Boeke JD. A comprehensive synthetic genetic interaction network governing yeast histone acetylation and deacetylation. Genes & Development. 22: 2062-74. PMID 18676811 DOI: 10.1101/Gad.1679508 |
0.402 |
|
| 2008 |
Deng H, Yu F, Chen J, Zhao Y, Xiang J, Lin A. Phosphorylation of Bad at Thr-201 by JNK1 promotes glycolysis through activation of phosphofructokinase-1. The Journal of Biological Chemistry. 283: 20754-60. PMID 18469002 DOI: 10.1074/Jbc.M800024200 |
0.393 |
|
| 2008 |
Jung SY, Li Y, Wang Y, Chen Y, Zhao Y, Qin J. Complications in the assignment of 14 and 28 Da mass shift detected by mass spectrometry as in vivo methylation from endogenous proteins. Analytical Chemistry. 80: 1721-9. PMID 18247584 DOI: 10.1021/Ac7021025 |
0.402 |
|
| 2008 |
Sprung R, Chen Y, Zhang K, Cheng D, Zhang T, Peng J, Zhao Y. Identification and validation of eukaryotic aspartate and glutamate methylation in proteins. Journal of Proteome Research. 7: 1001-6. PMID 18220335 DOI: 10.1021/Pr0705338 |
0.377 |
|
| 2008 |
Chan Kim S, Kho Y, Barma D, Falck J, Zhao Y. A tagging-via-substrate technology for genome-wide detection and identification of farnesylated proteins. Methods in Enzymology. 407: 629-37. PMID 16757357 DOI: 10.1016/S0076-6879(05)07049-7 |
0.379 |
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| 2008 |
Sung YJ, Li Y, Wang Y, Chen Y, Liu XD, Eissa NT, Zhao Y, Qin J. Complications in the assignment of 14 and 28 da mass shift detected by mass spectrometry as in vivo methylation from endogenous proteins (Analytical Chemistry (2008) 80, (1721-1729)) Analytical Chemistry. 80. DOI: 10.1021/Ac801953E |
0.319 |
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| 2007 |
Kang J, Chen Y, Zhao Y, Yu H. Autophosphorylation-dependent activation of human Mps1 is required for the spindle checkpoint. Proceedings of the National Academy of Sciences of the United States of America. 104: 20232-7. PMID 18083840 DOI: 10.1073/Pnas.0710519105 |
0.331 |
|
| 2007 |
Chang B, Chen Y, Zhao Y, Bruick RK. JMJD6 is a histone arginine demethylase. Science (New York, N.Y.). 318: 444-7. PMID 17947579 DOI: 10.1126/Science.1145801 |
0.43 |
|
| 2007 |
Bartz R, Zehmer JK, Zhu M, Chen Y, Serrero G, Zhao Y, Liu P. Dynamic activity of lipid droplets: protein phosphorylation and GTP-mediated protein translocation. Journal of Proteome Research. 6: 3256-65. PMID 17608402 DOI: 10.1021/Pr070158J |
0.402 |
|
| 2007 |
Ganesan AK, Kho Y, Kim SC, Chen Y, Zhao Y, White MA. Broad spectrum identification of SUMO substrates in melanoma cells. Proteomics. 7: 2216-21. PMID 17549794 DOI: 10.1002/Pmic.200600971 |
0.401 |
|
| 2007 |
Li H, Zhang Z, Wang B, Zhang J, Zhao Y, Jin Y. Wwp2-mediated ubiquitination of the RNA polymerase II large subunit in mouse embryonic pluripotent stem cells. Molecular and Cellular Biology. 27: 5296-305. PMID 17526739 DOI: 10.1128/Mcb.01667-06 |
0.348 |
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| 2007 |
Xu Y, Sprung R, Kwon SW, Kim SC, Zhao Y. Isolation of phosphopeptides by pI-difference-based electrophoresis. Journal of Proteome Research. 6: 1153-7. PMID 17330948 DOI: 10.1021/Pr060498P |
0.343 |
|
| 2007 |
Chen Y, Sprung R, Tang Y, Ball H, Sangras B, Kim SC, Falck JR, Peng J, Gu W, Zhao Y. Lysine propionylation and butyrylation are novel post-translational modifications in histones. Molecular & Cellular Proteomics : McP. 6: 812-9. PMID 17267393 DOI: 10.1074/Mcp.M700021-Mcp200 |
0.48 |
|
| 2007 |
Lee J, Xu Y, Chen Y, Sprung R, Kim SC, Xie S, Zhao Y. Mitochondrial phosphoproteome revealed by an improved IMAC method and MS/MS/MS. Molecular & Cellular Proteomics : McP. 6: 669-76. PMID 17208939 DOI: 10.1074/Mcp.M600218-Mcp200 |
0.372 |
|
| 2006 |
Kim SC, Chen Y, Mirza S, Xu Y, Lee J, Liu P, Zhao Y. A clean, more efficient method for in-solution digestion of protein mixtures without detergent or urea. Journal of Proteome Research. 5: 3446-52. PMID 17137347 DOI: 10.1021/Pr0603396 |
0.678 |
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| 2006 |
Chien Y, Kim S, Bumeister R, Loo YM, Kwon SW, Johnson CL, Balakireva MG, Romeo Y, Kopelovich L, Gale M, Yeaman C, Camonis JH, Zhao Y, White MA. RalB GTPase-mediated activation of the IkappaB family kinase TBK1 couples innate immune signaling to tumor cell survival. Cell. 127: 157-70. PMID 17018283 DOI: 10.1016/J.Cell.2006.08.034 |
0.323 |
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| 2006 |
Kim SC, Sprung R, Chen Y, Xu Y, Ball H, Pei J, Cheng T, Kho Y, Xiao H, Xiao L, Grishin NV, White M, Yang XJ, Zhao Y. Substrate and functional diversity of lysine acetylation revealed by a proteomics survey. Molecular Cell. 23: 607-18. PMID 16916647 DOI: 10.1016/J.Molcel.2006.06.026 |
0.489 |
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| 2006 |
Anselmo AN, Earnest S, Chen W, Juang YC, Kim SC, Zhao Y, Cobb MH. WNK1 and OSR1 regulate the Na+, K+, 2Cl- cotransporter in HeLa cells. Proceedings of the National Academy of Sciences of the United States of America. 103: 10883-8. PMID 16832045 DOI: 10.1073/Pnas.0604607103 |
0.347 |
|
| 2006 |
Radichev I, Kwon SW, Zhao Y, DePamphilis ML, Vassilev A. Genetic analysis of human Orc2 reveals specific domains that are required in vivo for assembly and nuclear localization of the origin recognition complex. The Journal of Biological Chemistry. 281: 23264-73. PMID 16762929 DOI: 10.1074/Jbc.M603873200 |
0.338 |
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| 2006 |
Qiu Y, Zhao Y, Becker M, John S, Parekh BS, Huang S, Hendarwanto A, Martinez ED, Chen Y, Lu H, Adkins NL, Stavreva DA, Wiench M, Georgel PT, Schiltz RL, et al. HDAC1 acetylation is linked to progressive modulation of steroid receptor-induced gene transcription. Molecular Cell. 22: 669-79. PMID 16762839 DOI: 10.1016/J.Molcel.2006.04.019 |
0.392 |
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| 2006 |
Jin Y, Dai MS, Lu SZ, Xu Y, Luo Z, Zhao Y, Lu H. 14-3-3gamma binds to MDMX that is phosphorylated by UV-activated Chk1, resulting in p53 activation. The Embo Journal. 25: 1207-18. PMID 16511572 DOI: 10.1038/Sj.Emboj.7601010 |
0.34 |
|
| 2006 |
Nandi A, Sprung R, Barma DK, Zhao Y, Kim SC, Falck JR, Zhao Y. Global identification of O-GlcNAc-modified proteins. Analytical Chemistry. 78: 452-8. PMID 16408927 DOI: 10.1021/Ac051207J |
0.317 |
|
| 2006 |
McMahon KA, Zhu M, Kwon SW, Liu P, Zhao Y, Anderson RG. Detergent-free caveolae proteome suggests an interaction with ER and mitochondria. Proteomics. 6: 143-52. PMID 16294311 DOI: 10.1002/Pmic.200500208 |
0.324 |
|
| 2005 |
Zhou G, Li H, Gong Y, Zhao Y, Cheng J, Lee P, Zhao Y. Proteomic analysis of global alteration of protein expression in squamous cell carcinoma of the esophagus. Proteomics. 5: 3814-21. PMID 16127732 DOI: 10.1002/Pmic.200401230 |
0.338 |
|
| 2005 |
Cheng J, Zhang D, Kim K, Zhao Y, Zhao Y, Su B. Mip1, an MEKK2-interacting protein, controls MEKK2 dimerization and activation. Molecular and Cellular Biology. 25: 5955-64. PMID 15988011 DOI: 10.1128/Mcb.25.14.5955-5964.2005 |
0.354 |
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| 2005 |
Sprung R, Nandi A, Chen Y, Kim SC, Barma D, Falck JR, Zhao Y. Tagging-via-substrate strategy for probing O-GlcNAc modified proteins. Journal of Proteome Research. 4: 950-7. PMID 15952742 DOI: 10.1021/Pr050033J |
0.38 |
|
| 2005 |
Zhao Y, Zhang W, Kho Y, Zhao Y. Proteomic analysis of integral plasma membrane proteins. Analytical Chemistry. 76: 1817-23. PMID 15053638 DOI: 10.1021/Ac0354037 |
0.327 |
|
| 2004 |
Kho Y, Kim SC, Jiang C, Barma D, Kwon SW, Cheng J, Jaunbergs J, Weinbaum C, Tamanoi F, Falck J, Zhao Y. A tagging-via-substrate technology for detection and proteomics of farnesylated proteins. Proceedings of the National Academy of Sciences of the United States of America. 101: 12479-84. PMID 15308774 DOI: 10.1073/Pnas.0403413101 |
0.399 |
|
| 2004 |
Geiman TM, Sankpal UT, Robertson AK, Chen Y, Mazumdar M, Heale JT, Schmiesing JA, Kim W, Yokomori K, Zhao Y, Robertson KD. Isolation and characterization of a novel DNA methyltransferase complex linking DNMT3B with components of the mitotic chromosome condensation machinery. Nucleic Acids Research. 32: 2716-29. PMID 15148359 DOI: 10.1093/Nar/Gkh589 |
0.343 |
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| 2004 |
Geiman TM, Sankpal UT, Robertson AK, Zhao Y, Zhao Y, Robertson KD. DNMT3B interacts with hSNF2H chromatin remodeling enzyme, HDACs 1 and 2, and components of the histone methylation system. Biochemical and Biophysical Research Communications. 318: 544-55. PMID 15120635 DOI: 10.1016/J.Bbrc.2004.04.058 |
0.39 |
|
| 2004 |
Zhao Y, Kwon SW, Anselmo A, Kaur K, White MA. Broad Spectrum Identification of Cellular Small Ubiquitin-related Modifier (SUMO) Substrate Proteins Journal of Biological Chemistry. 279: 20999-21002. PMID 15016812 DOI: 10.1074/Jbc.M401541200 |
0.441 |
|
| 2004 |
Berman DM, Shih IeM, Burke LA, Veenstra TD, Zhao Y, Conrads TP, Kwon SW, Hoang V, Yu LR, Zhou M, Kurman RJ, Petricoin EF, Liotta LA. Profiling the activity of G proteins in patient-derived tissues by rapid affinity-capture of signal transduction proteins (GRASP). Proteomics. 4: 812-8. PMID 14997501 DOI: 10.1002/Pmic.200300579 |
0.375 |
|
| 2004 |
Leak LV, Liotta LA, Krutzsch H, Jones M, Fusaro VA, Ross SJ, Zhao Y, Petricoin EF, Fusaroa VA. Proteomic analysis of lymph. Proteomics. 4: 753-65. PMID 14997497 DOI: 10.1002/Pmic.200300573 |
0.331 |
|
| 2004 |
Zhao Y, Zhang W, White MA, Zhao Y. Capillary high-performance liquid chromatography/mass spectrometric analysis of proteins from affinity-purified plasma membrane. Analytical Chemistry. 75: 3751-7. PMID 14572040 DOI: 10.1021/Ac034184M |
0.301 |
|
| 2003 |
Liu P, Ying Y, Zhao Y, Mundy DI, Zhu M, Anderson RG. Chinese hamster ovary K2 cell lipid droplets appear to be metabolic organelles involved in membrane traffic. The Journal of Biological Chemistry. 279: 3787-92. PMID 14597625 DOI: 10.1074/Jbc.M311945200 |
0.377 |
|
| 2003 |
Kwon SW, Kim SC, Jaunbergs J, Falck JR, Zhao Y. Selective enrichment of thiophosphorylated polypeptides as a tool for the analysis of protein phosphorylation. Molecular & Cellular Proteomics : McP. 2: 242-7. PMID 12734387 DOI: 10.1074/Mcp.M300039-Mcp200 |
0.39 |
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| 2003 |
Jiang X, Kim HE, Shu H, Zhao Y, Zhang H, Kofron J, Donnelly J, Burns D, Ng SC, Rosenberg S, Wang X. Distinctive roles of PHAP proteins and prothymosin-alpha in a death regulatory pathway. Science (New York, N.Y.). 299: 223-6. PMID 12522243 DOI: 10.1126/Science.1076807 |
0.334 |
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| 2002 |
Zhou G, Li H, DeCamp D, Chen S, Shu H, Gong Y, Flaig M, Gillespie JW, Hu N, Taylor PR, Emmert-Buck MR, Liotta LA, Petricoin EF, Zhao Y. 2D differential in-gel electrophoresis for the identification of esophageal scans cell cancer-specific protein markers. Molecular & Cellular Proteomics : McP. 1: 117-24. PMID 12096129 DOI: 10.1074/Mcp.M100015-Mcp200 |
0.361 |
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| 2002 |
Ahram M, Best CJ, Flaig MJ, Gillespie JW, Leiva IM, Chuaqui RF, Zhou G, Shu H, Duray PH, Linehan WM, Raffeld M, Ornstein DK, Zhao Y, Petricoin EF, Emmert-Buck MR. Proteomic analysis of human prostate cancer. Molecular Carcinogenesis. 33: 9-15. PMID 11807953 DOI: 10.1002/Mc.10019 |
0.302 |
|
| 2001 |
Vassilev A, Kaneko KJ, Shu H, Zhao Y, DePamphilis ML. TEAD/TEF transcription factors utilize the activation domain of YAP65, a Src/Yes-associated protein localized in the cytoplasm. Genes & Development. 15: 1229-41. PMID 11358867 DOI: 10.1101/Gad.888601 |
0.401 |
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| 2001 |
Keller DM, Zeng X, Wang Y, Zhang QH, Kapoor M, Shu H, Goodman R, Lozano G, Zhao Y, Lu H. A DNA damage-induced p53 serine 392 kinase complex contains CK2, hSpt16, and SSRP1. Molecular Cell. 7: 283-92. PMID 11239457 DOI: 10.1016/S1097-2765(01)00176-9 |
0.333 |
|
| 2000 |
Rout MP, Aitchison JD, Suprapto A, Hjertaas K, Zhao Y, Chait BT. The yeast nuclear pore complex: composition, architecture, and transport mechanism. The Journal of Cell Biology. 148: 635-51. PMID 10684247 DOI: 10.1083/Jcb.148.4.635 |
0.512 |
|
| 1998 |
Zhang JJ, Zhao Y, Chait BT, Lathem WW, Ritzi M, Knippers R, Darnell JE. Ser727-dependent recruitment of MCM5 by Stat1alpha in IFN-gamma-induced transcriptional activation. The Embo Journal. 17: 6963-71. PMID 9843502 DOI: 10.1093/Emboj/17.23.6963 |
0.544 |
|
| 1998 |
Peterson CL, Zhao Y, Chait BT. Subunits of the yeast SWI/SNF complex are members of the actin-related protein (ARP) family Journal of Biological Chemistry. 273: 23641-23644. DOI: 10.1074/Jbc.273.37.23641 |
0.53 |
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| 1997 |
Qin J, Fenyö D, Zhao Y, Hall WW, Chao DM, Wilson CJ, Young RA, Chait BT. A strategy for rapid, high-confidence protein identification. Analytical Chemistry. 69: 3995-4001. PMID 9322436 DOI: 10.1021/Ac970488V |
0.545 |
|
| 1997 |
Stewart PL, Chiu CY, Huang S, Muir T, Zhao Y, Chait B, Mathias P, Nemerow GR. Cryo-EM visualization of an exposed RGD epitope on adenovirus that escapes antibody neutralization Embo Journal. 16: 1189-1198. PMID 9135136 DOI: 10.1093/Emboj/16.6.1189 |
0.48 |
|
| 1997 |
Zhao Y, Kent SB, Chait BT. Rapid, sensitive structure analysis of oligosaccharides. Proceedings of the National Academy of Sciences of the United States of America. 94: 1629-33. PMID 9050829 DOI: 10.1073/Pnas.94.5.1629 |
0.472 |
|
| 1997 |
Zhao Y, Chait BT. Probing antibody-antigen interactions by mass spectrometry. Methods in Molecular Biology (Clifton, N.J.). 66: 129-36. PMID 8959711 DOI: 10.1385/0-89603-375-9:129 |
0.439 |
|
| 1996 |
Zhao Y, Muir TW, Kent SB, Tischer E, Scardina JM, Chait BT. Mapping protein-protein interactions by affinity-directed mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 93: 4020-4. PMID 8633009 DOI: 10.1073/Pnas.93.9.4020 |
0.524 |
|
| 1995 |
Ge H, Zhao Y, Chait BT, Roeder RG. Phosphorylation negatively regulates the function of coactivator PC4. Proceedings of the National Academy of Sciences of the United States of America. 91: 12691-5. PMID 7809103 DOI: 10.1073/Pnas.91.26.12691 |
0.532 |
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| 1995 |
Kim TK, Zhao Y, Ge H, Bernstein R, Roeder RG. TATA-binding protein residues implicated in a functional interplay between negative cofactor NC2 (Dr1) and general factors TFIIA and TFIIB. The Journal of Biological Chemistry. 270: 10976-81. PMID 7738039 DOI: 10.1074/Jbc.270.18.10976 |
0.341 |
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| 1994 |
Zhao Y, Chait BT. Protein Epitope Mapping By Mass Spectrometry Analytical Chemistry. 66: 3723-3726. PMID 7528478 DOI: 10.1021/Ac00093A029 |
0.506 |
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