Gabriel Krouk - Publications

B&PMP Montpellier 

47 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Safi A, Medici A, Szponarski W, Martin F, Clément-Vidal A, Marshall-Colon A, Ruffel S, Gaymard F, Rouached H, Leclercq J, Coruzzi G, Lacombe B, Krouk G. GARP transcription factors repress Arabidopsis nitrogen starvation response via ROS-dependent and -independent pathways. Journal of Experimental Botany. PMID 33758916 DOI: 10.1093/jxb/erab114  1
2020 Maghiaoui A, Bouguyon E, Cuesta C, Perrine-Walker F, Alcon C, Krouk G, Benkova E, Nacry P, Gojon A, Bach L. The Arabidopsis NRT1.1 transceptor coordinately controls auxin biosynthesis and transport to regulate root branching in response to nitrate. Journal of Experimental Botany. PMID 32428238 DOI: 10.1093/jxb/eraa242  0.64
2020 Vidal EA, Alvarez JM, Araus V, Riveras E, Brooks M, Krouk G, Ruffel S, Lejay L, Crawford N, Coruzzi GM, Gutiérrez RA. Nitrate 2020: Thirty years from transport to signaling networks. The Plant Cell. PMID 32169959 DOI: 10.1105/Tpc.19.00748  1
2020 Alvarez JM, Schinke AL, Brooks MD, Pasquino A, Leonelli L, Varala K, Safi A, Krouk G, Krapp A, Coruzzi GM. Transient genome-wide interactions of the master transcription factor NLP7 initiate a rapid nitrogen-response cascade. Nature Communications. 11: 1157. PMID 32123177 DOI: 10.1038/S41467-020-14979-6  1
2019 Falter-Braun P, Brady S, Gutiérrez RA, Coruzzi GM, Krouk G. iPlant Systems Biology (iPSB): An International Network Hub in the Plant Community. Molecular Plant. 12: 727-730. PMID 31125688 DOI: 10.1016/J.Molp.2019.05.005  1
2019 Bouain N, Krouk G, Lacombe B, Rouached H. Getting to the Root of Plant Mineral Nutrition: Combinatorial Nutrient Stresses Reveal Emergent Properties. Trends in Plant Science. PMID 31006547 DOI: 10.1016/J.Tplants.2019.03.008  0.64
2019 Brooks MD, Cirrone J, Pasquino AV, Alvarez JM, Swift J, Mittal S, Juang CL, Varala K, Gutiérrez RA, Krouk G, Shasha D, Coruzzi GM. Network Walking charts transcriptional dynamics of nitrogen signaling by integrating validated and predicted genome-wide interactions. Nature Communications. 10: 1569. PMID 30952851 DOI: 10.1038/S41467-019-09522-1  1
2019 Medici A, Szponarski W, Dangeville P, Safi A, Dissanayake IM, Saenchai C, Emanuel A, Rubio V, Lacombe B, Ruffel S, Tanurdzic M, Rouached H, Krouk G. Identification of molecular integrators shows that nitrogen actively controls the phosphate starvation response in plants. The Plant Cell. PMID 30872321 DOI: 10.1105/Tpc.18.00656  1
2019 Bellegarde F, Maghiaoui A, Boucherez J, Krouk G, Lejay L, Bach L, Gojon A, Martin A. The Chromatin Factor HNI9 and ELONGATED HYPOCOTYL 5 Maintain ROS Homeostasis under High Nitrogen Provision. Plant Physiology. PMID 30824566 DOI: 10.1104/Pp.18.01473  0.64
2018 Poitout A, Crabos A, Petřík I, Novák O, Krouk G, Lacombe B, Ruffel S. Responses to Systemic Nitrogen Signaling in Arabidopsis Roots Involve trans-Zeatin in Shoots. The Plant Cell. PMID 29764985 DOI: 10.1105/Tpc.18.00011  1
2018 Kisko M, Bouain N, Safi A, Medici A, Akkers RC, Secco D, Fouret G, Krouk G, Aarts MG, Busch W, Rouached H. controls phosphate homeostasis in a zinc-dependent manner. Elife. 7. PMID 29453864 DOI: 10.7554/Elife.32077  0.96
2018 Kisko M, Bouain N, Safi A, Medici A, Akkers RC, Secco D, Fouret G, Krouk G, Aarts MG, Busch W, Rouached H. Author response: LPCAT1 controls phosphate homeostasis in a zinc-dependent manner Elife. DOI: 10.7554/Elife.32077.021  0.96
2017 Friesner J, Assmann SM, Bastow R, Bailey-Serres J, Beynon J, Brendel V, Buell CR, Bucksch A, Busch W, Demura T, Dinneny JR, Doherty CJ, Eveland AL, Falter-Braun P, Gehan MA, ... ... Krouk G, et al. The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology. Plant Physiology. 175: 1499-1509. PMID 29208732 DOI: 10.1104/Pp.17.01490  0.92
2017 Pal S, Kisko M, Dubos C, Lacombe B, Berthomieu P, Krouk G, Rouached H. TransDetect identifies a new regulatory module controlling phosphate accumulation. Plant Physiology. PMID 28827455 DOI: 10.1104/Pp.17.00568  0.64
2017 Safi A, Medici A, Szponarski W, Ruffel S, Lacombe B, Krouk G. The world according to GARP transcription factors. Current Opinion in Plant Biology. 39: 159-167. PMID 28802165 DOI: 10.1016/J.Pbi.2017.07.006  1
2017 Carré C, Mas A, Krouk G. Reverse engineering highlights potential principles of large gene regulatory network design and learning. Npj Systems Biology and Applications. 3: 17. PMID 28649444 DOI: 10.1038/s41540-017-0019-y  0.32
2016 Ristova D, Carré C, Pervent M, Medici A, Kim GJ, Scalia D, Ruffel S, Birnbaum KD, Lacombe B, Busch W, Coruzzi GM, Krouk G. Combinatorial interaction network of transcriptomic and phenotypic responses to nitrogen and hormones in the Arabidopsis thaliana root. Science Signaling. 9: rs13. PMID 27811143 DOI: 10.1126/Scisignal.Aaf2768  1
2016 Bouguyon E, Perrine-Walker F, Pervent M, Rochette J, Cuesta C, Benkova E, Martinière A, Bach L, Krouk G, Gojon A, Nacry P. Nitrate Controls Root Development through Post-Transcriptional Regulation of the NRT1.1/NPF6.3 transporter/sensor. Plant Physiology. PMID 27543115 DOI: 10.1104/Pp.16.01047  0.64
2016 O'Brien JA, Vega A, Bouguyon E, Krouk G, Gojon A, Coruzzi G, Gutiérrez RA. Nitrate transport, sensing and responses in plants. Molecular Plant. PMID 27212387 DOI: 10.1016/J.Molp.2016.05.004  0.88
2016 Ruffel S, Poitout A, Krouk G, Coruzzi GM, Lacombe B. Long-distance nitrate signaling displays cytokinin dependent and independent branches. Journal of Integrative Plant Biology. 58: 226-9. PMID 26619818 DOI: 10.1111/Jipb.12453  1
2015 Bouguyon E, Brun F, Meynard D, Kubeš M, Pervent M, Leran S, Lacombe B, Krouk G, Guiderdoni E, Zažímalová E, Hoyerová K, Nacry P, Gojon A. Multiple mechanisms of nitrate sensing by Arabidopsis nitrate transceptor NRT1.1. Nature Plants. 1: 15015. PMID 27246882 DOI: 10.1038/Nplants.2015.15  0.64
2015 Medici A, Marshall-Colon A, Ronzier E, Szponarski W, Wang R, Gojon A, Crawford NM, Ruffel S, Coruzzi GM, Krouk G. AtNIGT1/HRS1 integrates nitrate and phosphate signals at the Arabidopsis root tip. Nature Communications. 6: 6274. PMID 25723764 DOI: 10.1038/Ncomms7274  0.92
2015 Krouk G, Carré C, Fizames C, Gojon A, Ruffel S, Lacombe B. GeneCloud Reveals Semantic Enrichment in Lists of Gene Descriptions. Molecular Plant. 8: 971-3. PMID 25707756 DOI: 10.1016/J.Molp.2015.02.005  1
2015 Rosas U, Cibrian-Jaramillo A, Ristova D, Banta JA, Gifford ML, Fan AH, Zhou RW, Kim GJ, Krouk G, Birnbaum KD, Purugganan MD, Coruzzi GM. Correction: Integration of responses within and across Arabidopsis natural accessions uncovers loci controlling root systems architecture (Proceedings of the National Academy of Sciences of the United States of America (2015) 110 (15133-15138) DOI: 0.1073/pnas.1305883110) Proceedings of the National Academy of Sciences of the United States of America. 112: E2555. DOI: 10.1073/Pnas.1507065112  0.92
2014 Li Y, Krouk G, Coruzzi GM, Ruffel S. Finding a nitrogen niche: a systems integration of local and systemic nitrogen signalling in plants. Journal of Experimental Botany. 65: 5601-10. PMID 24963003 DOI: 10.1093/Jxb/Eru263  1
2014 Para A, Li Y, Marshall-Colón A, Varala K, Francoeur NJ, Moran TM, Edwards MB, Hackley C, Bargmann BO, Birnbaum KD, McCombie WR, Krouk G, Coruzzi GM. Hit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 111: 10371-6. PMID 24958886 DOI: 10.1073/Pnas.1404657111  0.92
2014 Medici A, Krouk G. The primary nitrate response: a multifaceted signalling pathway. Journal of Experimental Botany. 65: 5567-76. PMID 24942915 DOI: 10.1093/Jxb/Eru245  0.96
2013 Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA. Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots. Bmc Genomics. 14: 701. PMID 24119003 DOI: 10.1186/1471-2164-14-701  0.92
2013 Bargmann BO, Vanneste S, Krouk G, Nawy T, Efroni I, Shani E, Choe G, Friml J, Bergmann DC, Estelle M, Birnbaum KD. A map of cell type-specific auxin responses. Molecular Systems Biology. 9: 688. PMID 24022006 DOI: 10.1038/Msb.2013.40  0.92
2013 Rosas U, Cibrian-Jaramillo A, Ristova D, Banta JA, Gifford ML, Fan AH, Zhou RW, Kim GJ, Krouk G, Birnbaum KD, Purugganan MD, Coruzzi GM. Integration of responses within and across Arabidopsis natural accessions uncovers loci controlling root systems architecture. Proceedings of the National Academy of Sciences of the United States of America. 110: 15133-8. PMID 23980140 DOI: 10.1073/Pnas.1305883110  0.92
2013 Krouk G, Lingeman J, Colon AM, Coruzzi G, Shasha D. Gene regulatory networks in plants: learning causality from time and perturbation. Genome Biology. 14: 123. PMID 23805876 DOI: 10.1186/Gb-2013-14-6-123  0.92
2013 Boursiac Y, Léran S, Corratgé-Faillie C, Gojon A, Krouk G, Lacombe B. ABA transport and transporters. Trends in Plant Science. 18: 325-33. PMID 23453706 DOI: 10.1016/J.Tplants.2013.01.007  0.64
2013 Bargmann BO, Marshall-Colon A, Efroni I, Ruffel S, Birnbaum KD, Coruzzi GM, Krouk G. TARGET: a transient transformation system for genome-wide transcription factor target discovery. Molecular Plant. 6: 978-80. PMID 23335732 DOI: 10.1093/Mp/Sst010  0.92
2013 Ristova D, Rosas U, Krouk G, Ruffel S, Birnbaum KD, Coruzzi GM. RootScape: a landmark-based system for rapid screening of root architecture in Arabidopsis. Plant Physiology. 161: 1086-96. PMID 23335624 DOI: 10.1104/Pp.112.210872  0.92
2011 Krouk G, Gojon A. [An original ion (nitrate) sensing mechanism: story of the discovery in plants and perspectives]. MéDecine Sciences : M/S. 27: 1045-7. PMID 22192735 DOI: 10.1051/Medsci/20112712002  0.64
2011 Ruffel S, Krouk G, Ristova D, Shasha D, Birnbaum KD, Coruzzi GM. Nitrogen economics of root foraging: transitive closure of the nitrate-cytokinin relay and distinct systemic signaling for N supply vs. demand. Proceedings of the National Academy of Sciences of the United States of America. 108: 18524-9. PMID 22025711 DOI: 10.1073/Pnas.1108684108  0.92
2011 Widiez T, El Kafafi el S, Girin T, Berr A, Ruffel S, Krouk G, Vayssières A, Shen WH, Coruzzi GM, Gojon A, Lepetit M. High nitrogen insensitive 9 (HNI9)-mediated systemic repression of root NO3- uptake is associated with changes in histone methylation. Proceedings of the National Academy of Sciences of the United States of America. 108: 13329-34. PMID 21788519 DOI: 10.1073/Pnas.1017863108  1
2011 Krouk G, Ruffel S, Gutiérrez RA, Gojon A, Crawford NM, Coruzzi GM, Lacombe B. A framework integrating plant growth with hormones and nutrients. Trends in Plant Science. 16: 178-82. PMID 21393048 DOI: 10.1016/J.Tplants.2011.02.004  0.92
2011 Gojon A, Krouk G, Perrine-Walker F, Laugier E. Nitrate transceptor(s) in plants. Journal of Experimental Botany. 62: 2299-308. PMID 21239382 DOI: 10.1093/Jxb/Erq419  0.64
2010 Krouk G, Mirowski P, LeCun Y, Shasha DE, Coruzzi GM. Predictive network modeling of the high-resolution dynamic plant transcriptome in response to nitrate. Genome Biology. 11: R123. PMID 21182762 DOI: 10.1186/Gb-2010-11-12-R123  0.92
2010 Obertello M, Krouk G, Katari MS, Runko SJ, Coruzzi GM. Modeling the global effect of the basic-leucine zipper transcription factor 1 (bZIP1) on nitrogen and light regulation in Arabidopsis. Bmc Systems Biology. 4: 111. PMID 20704717 DOI: 10.1186/1752-0509-4-111  1
2010 Krouk G, Lacombe B, Bielach A, Perrine-Walker F, Malinska K, Mounier E, Hoyerova K, Tillard P, Leon S, Ljung K, Zazimalova E, Benkova E, Nacry P, Gojon A. Nitrate-regulated auxin transport by NRT1.1 defines a mechanism for nutrient sensing in plants. Developmental Cell. 18: 927-37. PMID 20627075 DOI: 10.1016/J.Devcel.2010.05.008  0.64
2010 Krouk G, Crawford NM, Coruzzi GM, Tsay YF. Nitrate signaling: adaptation to fluctuating environments. Current Opinion in Plant Biology. 13: 266-73. PMID 20093067 DOI: 10.1016/J.Pbi.2009.12.003  1
2010 Ruffel S, Krouk G, Coruzzi GM. A systems view of responses to nutritional cues in Arabidopsis: toward a paradigm shift for predictive network modeling. Plant Physiology. 152: 445-52. PMID 19939945 DOI: 10.1104/Pp.109.148502  1
2009 Nero D, Krouk G, Tranchina D, Coruzzi GM. A system biology approach highlights a hormonal enhancer effect on regulation of genes in a nitrate responsive "biomodule". Bmc Systems Biology. 3: 59. PMID 19500399 DOI: 10.1186/1752-0509-3-59  0.92
2009 Krouk G, Tranchina D, Lejay L, Cruikshank AA, Shasha D, Coruzzi GM, Gutiérrez RA. A systems approach uncovers restrictions for signal interactions regulating genome-wide responses to nutritional cues in Arabidopsis. Plos Computational Biology. 5: e1000326. PMID 19300494 DOI: 10.1371/Journal.Pcbi.1000326  0.92
2006 Krouk G, Tillard P, Gojon A. Regulation of the high-affinity NO3- uptake system by NRT1.1-mediated NO3- demand signaling in Arabidopsis. Plant Physiology. 142: 1075-86. PMID 16998085 DOI: 10.1104/Pp.106.087510  0.64
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