Gabriel Krouk - Publications

Affiliations: 
B&PMP Montpellier 

53 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Brooks MD, Reed KM, Krouk G, Coruzzi GM, Bargmann BOR. The TARGET System: Rapid Identification of Direct Targets of Transcription Factors by Gene Regulation in Plant Cells. Methods in Molecular Biology (Clifton, N.J.). 2594: 1-12. PMID 36264484 DOI: 10.1007/978-1-0716-2815-7_1  0.826
2021 Camut L, Gallova B, Jilli L, Sirlin-Josserand M, Carrera E, Sakvarelidze-Achard L, Ruffel S, Krouk G, Thomas SG, Hedden P, Phillips AL, Davière JM, Achard P. Nitrate signaling promotes plant growth by upregulating gibberellin biosynthesis and destabilization of DELLA proteins. Current Biology : Cb. PMID 34614391 DOI: 10.1016/j.cub.2021.09.024  0.782
2021 Safi A, Medici A, Szponarski W, Martin F, Clément-Vidal A, Marshall-Colon A, Ruffel S, Gaymard F, Rouached H, Leclercq J, Coruzzi G, Lacombe B, Krouk G. GARP transcription factors repress Arabidopsis nitrogen starvation response via ROS-dependent and -independent pathways. Journal of Experimental Botany. PMID 33758916 DOI: 10.1093/jxb/erab114  0.838
2020 Krouk G, Kiba T. Nitrogen and Phosphorus interactions in plants: from agronomic to physiological and molecular insights. Current Opinion in Plant Biology. 57: 104-109. PMID 32882570 DOI: 10.1016/J.Pbi.2020.07.002  0.449
2020 Maghiaoui A, Bouguyon E, Cuesta C, Perrine-Walker F, Alcon C, Krouk G, Benkova E, Nacry P, Gojon A, Bach L. The Arabidopsis NRT1.1 transceptor coordinately controls auxin biosynthesis and transport to regulate root branching in response to nitrate. Journal of Experimental Botany. PMID 32428238 DOI: 10.1093/jxb/eraa242  0.466
2020 Vidal EA, Alvarez JM, Araus V, Riveras E, Brooks M, Krouk G, Ruffel S, Lejay L, Crawford N, Coruzzi GM, Gutiérrez RA. Nitrate 2020: Thirty years from transport to signaling networks. The Plant Cell. PMID 32169959 DOI: 10.1105/Tpc.19.00748  0.809
2020 Alvarez JM, Schinke AL, Brooks MD, Pasquino A, Leonelli L, Varala K, Safi A, Krouk G, Krapp A, Coruzzi GM. Transient genome-wide interactions of the master transcription factor NLP7 initiate a rapid nitrogen-response cascade. Nature Communications. 11: 1157. PMID 32123177 DOI: 10.1038/S41467-020-14979-6  0.785
2019 Falter-Braun P, Brady S, Gutiérrez RA, Coruzzi GM, Krouk G. iPlant Systems Biology (iPSB): An International Network Hub in the Plant Community. Molecular Plant. 12: 727-730. PMID 31125688 DOI: 10.1016/J.Molp.2019.05.005  0.8
2019 Bouain N, Krouk G, Lacombe B, Rouached H. Getting to the Root of Plant Mineral Nutrition: Combinatorial Nutrient Stresses Reveal Emergent Properties. Trends in Plant Science. PMID 31006547 DOI: 10.1016/J.Tplants.2019.03.008  0.454
2019 Brooks MD, Cirrone J, Pasquino AV, Alvarez JM, Swift J, Mittal S, Juang CL, Varala K, Gutiérrez RA, Krouk G, Shasha D, Coruzzi GM. Network Walking charts transcriptional dynamics of nitrogen signaling by integrating validated and predicted genome-wide interactions. Nature Communications. 10: 1569. PMID 30952851 DOI: 10.1038/S41467-019-09522-1  0.799
2019 Medici A, Szponarski W, Dangeville P, Safi A, Dissanayake IM, Saenchai C, Emanuel A, Rubio V, Lacombe B, Ruffel S, Tanurdzic M, Rouached H, Krouk G. Identification of molecular integrators shows that nitrogen actively controls the phosphate starvation response in plants. The Plant Cell. PMID 30872321 DOI: 10.1105/Tpc.18.00656  0.849
2019 Bellegarde F, Maghiaoui A, Boucherez J, Krouk G, Lejay L, Bach L, Gojon A, Martin A. The Chromatin Factor HNI9 and ELONGATED HYPOCOTYL 5 Maintain ROS Homeostasis under High Nitrogen Provision. Plant Physiology. PMID 30824566 DOI: 10.1104/Pp.18.01473  0.782
2018 Poitout A, Crabos A, Petřík I, Novák O, Krouk G, Lacombe B, Ruffel S. Responses to Systemic Nitrogen Signaling in Arabidopsis Roots Involve trans-Zeatin in Shoots. The Plant Cell. PMID 29764985 DOI: 10.1105/Tpc.18.00011  0.827
2018 Kisko M, Bouain N, Safi A, Medici A, Akkers RC, Secco D, Fouret G, Krouk G, Aarts MG, Busch W, Rouached H. controls phosphate homeostasis in a zinc-dependent manner. Elife. 7. PMID 29453864 DOI: 10.7554/Elife.32077  0.824
2018 Kisko M, Bouain N, Safi A, Medici A, Akkers RC, Secco D, Fouret G, Krouk G, Aarts MG, Busch W, Rouached H. Author response: LPCAT1 controls phosphate homeostasis in a zinc-dependent manner Elife. DOI: 10.7554/Elife.32077.021  0.776
2017 Friesner J, Assmann SM, Bastow R, Bailey-Serres J, Beynon J, Brendel V, Buell CR, Bucksch A, Busch W, Demura T, Dinneny JR, Doherty CJ, Eveland AL, Falter-Braun P, Gehan MA, ... ... Krouk G, et al. The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology. Plant Physiology. 175: 1499-1509. PMID 29208732 DOI: 10.1104/Pp.17.01490  0.683
2017 Pal S, Kisko M, Dubos C, Lacombe B, Berthomieu P, Krouk G, Rouached H. TransDetect identifies a new regulatory module controlling phosphate accumulation. Plant Physiology. PMID 28827455 DOI: 10.1104/Pp.17.00568  0.489
2017 Safi A, Medici A, Szponarski W, Ruffel S, Lacombe B, Krouk G. The world according to GARP transcription factors. Current Opinion in Plant Biology. 39: 159-167. PMID 28802165 DOI: 10.1016/J.Pbi.2017.07.006  0.836
2017 Krouk G. Nitrate signalling: Calcium bridges the nitrate gap. Nature Plants. 3: 17095. PMID 28628086 DOI: 10.1038/Nplants.2017.95  0.357
2016 Ristova D, Carré C, Pervent M, Medici A, Kim GJ, Scalia D, Ruffel S, Birnbaum KD, Lacombe B, Busch W, Coruzzi GM, Krouk G. Combinatorial interaction network of transcriptomic and phenotypic responses to nitrogen and hormones in the Arabidopsis thaliana root. Science Signaling. 9: rs13. PMID 27811143 DOI: 10.1126/Scisignal.Aaf2768  0.818
2016 Bellati J, Champeyroux C, Hem S, Rofidal V, Krouk G, Maurel C, Santoni V. Novel aquaporin regulatory mechanisms revealed by interactomics. Molecular & Cellular Proteomics : McP. PMID 27609422 DOI: 10.1074/Mcp.M116.060087  0.398
2016 Bouguyon E, Perrine-Walker F, Pervent M, Rochette J, Cuesta C, Benkova E, Martinière A, Bach L, Krouk G, Gojon A, Nacry P. Nitrate Controls Root Development through Post-Transcriptional Regulation of the NRT1.1/NPF6.3 transporter/sensor. Plant Physiology. PMID 27543115 DOI: 10.1104/Pp.16.01047  0.467
2016 O'Brien JA, Vega A, Bouguyon E, Krouk G, Gojon A, Coruzzi G, Gutiérrez RA. Nitrate transport, sensing and responses in plants. Molecular Plant. PMID 27212387 DOI: 10.1016/J.Molp.2016.05.004  0.854
2016 Krouk G. Hormones and nitrate: a two-way connection. Plant Molecular Biology. 91: 599-606. PMID 27003907 DOI: 10.1007/S11103-016-0463-X  0.497
2016 Ruffel S, Poitout A, Krouk G, Coruzzi GM, Lacombe B. Long-distance nitrate signaling displays cytokinin dependent and independent branches. Journal of Integrative Plant Biology. 58: 226-9. PMID 26619818 DOI: 10.1111/Jipb.12453  0.835
2015 Bouguyon E, Brun F, Meynard D, Kubeš M, Pervent M, Leran S, Lacombe B, Krouk G, Guiderdoni E, Zažímalová E, Hoyerová K, Nacry P, Gojon A. Multiple mechanisms of nitrate sensing by Arabidopsis nitrate transceptor NRT1.1. Nature Plants. 1: 15015. PMID 27246882 DOI: 10.1038/Nplants.2015.15  0.829
2015 Medici A, Marshall-Colon A, Ronzier E, Szponarski W, Wang R, Gojon A, Crawford NM, Ruffel S, Coruzzi GM, Krouk G. AtNIGT1/HRS1 integrates nitrate and phosphate signals at the Arabidopsis root tip. Nature Communications. 6: 6274. PMID 25723764 DOI: 10.1038/Ncomms7274  0.827
2015 Krouk G, Carré C, Fizames C, Gojon A, Ruffel S, Lacombe B. GeneCloud Reveals Semantic Enrichment in Lists of Gene Descriptions. Molecular Plant. 8: 971-3. PMID 25707756 DOI: 10.1016/J.Molp.2015.02.005  0.723
2015 Rosas U, Cibrian-Jaramillo A, Ristova D, Banta JA, Gifford ML, Fan AH, Zhou RW, Kim GJ, Krouk G, Birnbaum KD, Purugganan MD, Coruzzi GM. Correction: Integration of responses within and across Arabidopsis natural accessions uncovers loci controlling root systems architecture (Proceedings of the National Academy of Sciences of the United States of America (2015) 110 (15133-15138) DOI: 0.1073/pnas.1305883110) Proceedings of the National Academy of Sciences of the United States of America. 112: E2555. DOI: 10.1073/Pnas.1507065112  0.777
2014 Li Y, Krouk G, Coruzzi GM, Ruffel S. Finding a nitrogen niche: a systems integration of local and systemic nitrogen signalling in plants. Journal of Experimental Botany. 65: 5601-10. PMID 24963003 DOI: 10.1093/Jxb/Eru263  0.847
2014 Para A, Li Y, Marshall-Colón A, Varala K, Francoeur NJ, Moran TM, Edwards MB, Hackley C, Bargmann BO, Birnbaum KD, McCombie WR, Krouk G, Coruzzi GM. Hit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 111: 10371-6. PMID 24958886 DOI: 10.1073/Pnas.1404657111  0.816
2014 Medici A, Krouk G. The primary nitrate response: a multifaceted signalling pathway. Journal of Experimental Botany. 65: 5567-76. PMID 24942915 DOI: 10.1093/Jxb/Eru245  0.808
2013 Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA. Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots. Bmc Genomics. 14: 701. PMID 24119003 DOI: 10.1186/1471-2164-14-701  0.844
2013 Bargmann BO, Vanneste S, Krouk G, Nawy T, Efroni I, Shani E, Choe G, Friml J, Bergmann DC, Estelle M, Birnbaum KD. A map of cell type-specific auxin responses. Molecular Systems Biology. 9: 688. PMID 24022006 DOI: 10.1038/Msb.2013.40  0.428
2013 Rosas U, Cibrian-Jaramillo A, Ristova D, Banta JA, Gifford ML, Fan AH, Zhou RW, Kim GJ, Krouk G, Birnbaum KD, Purugganan MD, Coruzzi GM. Integration of responses within and across Arabidopsis natural accessions uncovers loci controlling root systems architecture. Proceedings of the National Academy of Sciences of the United States of America. 110: 15133-8. PMID 23980140 DOI: 10.1073/Pnas.1305883110  0.804
2013 Krouk G, Lingeman J, Colon AM, Coruzzi G, Shasha D. Gene regulatory networks in plants: learning causality from time and perturbation. Genome Biology. 14: 123. PMID 23805876 DOI: 10.1186/Gb-2013-14-6-123  0.752
2013 Boursiac Y, Léran S, Corratgé-Faillie C, Gojon A, Krouk G, Lacombe B. ABA transport and transporters. Trends in Plant Science. 18: 325-33. PMID 23453706 DOI: 10.1016/J.Tplants.2013.01.007  0.782
2013 Bargmann BO, Marshall-Colon A, Efroni I, Ruffel S, Birnbaum KD, Coruzzi GM, Krouk G. TARGET: a transient transformation system for genome-wide transcription factor target discovery. Molecular Plant. 6: 978-80. PMID 23335732 DOI: 10.1093/Mp/Sst010  0.776
2013 Ristova D, Rosas U, Krouk G, Ruffel S, Birnbaum KD, Coruzzi GM. RootScape: a landmark-based system for rapid screening of root architecture in Arabidopsis. Plant Physiology. 161: 1086-96. PMID 23335624 DOI: 10.1104/Pp.112.210872  0.798
2012 Ravet K, Reyt G, Arnaud N, Krouk G, Djouani el-B, Boucherez J, Briat JF, Gaymard F. Iron and ROS control of the DownSTream mRNA decay pathway is essential for plant fitness. The Embo Journal. 31: 175-86. PMID 21946558 DOI: 10.1038/Emboj.2011.341  0.43
2011 Ruffel S, Krouk G, Ristova D, Shasha D, Birnbaum KD, Coruzzi GM. Nitrogen economics of root foraging: transitive closure of the nitrate-cytokinin relay and distinct systemic signaling for N supply vs. demand. Proceedings of the National Academy of Sciences of the United States of America. 108: 18524-9. PMID 22025711 DOI: 10.1073/Pnas.1108684108  0.828
2011 Widiez T, El Kafafi el S, Girin T, Berr A, Ruffel S, Krouk G, Vayssières A, Shen WH, Coruzzi GM, Gojon A, Lepetit M. High nitrogen insensitive 9 (HNI9)-mediated systemic repression of root NO3- uptake is associated with changes in histone methylation. Proceedings of the National Academy of Sciences of the United States of America. 108: 13329-34. PMID 21788519 DOI: 10.1073/Pnas.1017863108  0.839
2011 Krouk G, Ruffel S, Gutiérrez RA, Gojon A, Crawford NM, Coruzzi GM, Lacombe B. A framework integrating plant growth with hormones and nutrients. Trends in Plant Science. 16: 178-82. PMID 21393048 DOI: 10.1016/J.Tplants.2011.02.004  0.839
2011 Gojon A, Krouk G, Perrine-Walker F, Laugier E. Nitrate transceptor(s) in plants. Journal of Experimental Botany. 62: 2299-308. PMID 21239382 DOI: 10.1093/Jxb/Erq419  0.498
2010 Krouk G, Mirowski P, LeCun Y, Shasha DE, Coruzzi GM. Predictive network modeling of the high-resolution dynamic plant transcriptome in response to nitrate. Genome Biology. 11: R123. PMID 21182762 DOI: 10.1186/Gb-2010-11-12-R123  0.789
2010 Obertello M, Krouk G, Katari MS, Runko SJ, Coruzzi GM. Modeling the global effect of the basic-leucine zipper transcription factor 1 (bZIP1) on nitrogen and light regulation in Arabidopsis. Bmc Systems Biology. 4: 111. PMID 20704717 DOI: 10.1186/1752-0509-4-111  0.825
2010 Krouk G, Lacombe B, Bielach A, Perrine-Walker F, Malinska K, Mounier E, Hoyerova K, Tillard P, Leon S, Ljung K, Zazimalova E, Benkova E, Nacry P, Gojon A. Nitrate-regulated auxin transport by NRT1.1 defines a mechanism for nutrient sensing in plants. Developmental Cell. 18: 927-37. PMID 20627075 DOI: 10.1016/J.Devcel.2010.05.008  0.494
2010 Krouk G, Crawford NM, Coruzzi GM, Tsay YF. Nitrate signaling: adaptation to fluctuating environments. Current Opinion in Plant Biology. 13: 266-73. PMID 20093067 DOI: 10.1016/J.Pbi.2009.12.003  0.794
2010 Ruffel S, Krouk G, Coruzzi GM. A systems view of responses to nutritional cues in Arabidopsis: toward a paradigm shift for predictive network modeling. Plant Physiology. 152: 445-52. PMID 19939945 DOI: 10.1104/Pp.109.148502  0.821
2009 Nero D, Krouk G, Tranchina D, Coruzzi GM. A system biology approach highlights a hormonal enhancer effect on regulation of genes in a nitrate responsive "biomodule". Bmc Systems Biology. 3: 59. PMID 19500399 DOI: 10.1186/1752-0509-3-59  0.826
2009 Krouk G, Tranchina D, Lejay L, Cruikshank AA, Shasha D, Coruzzi GM, Gutiérrez RA. A systems approach uncovers restrictions for signal interactions regulating genome-wide responses to nutritional cues in Arabidopsis. Plos Computational Biology. 5: e1000326. PMID 19300494 DOI: 10.1371/Journal.Pcbi.1000326  0.843
2008 Krouk G, Gutiérrez R, Gifford M, Birnbaum K, Shasha G, Coruzzi G. A systems approach to nitrogen regulatory networks and the Virtual Plant Comparative Biochemistry and Physiology Part a: Molecular & Integrative Physiology. 150: S46. DOI: 10.1016/J.Cbpa.2008.04.024  0.765
2006 Krouk G, Tillard P, Gojon A. Regulation of the high-affinity NO3- uptake system by NRT1.1-mediated NO3- demand signaling in Arabidopsis. Plant Physiology. 142: 1075-86. PMID 16998085 DOI: 10.1104/Pp.106.087510  0.528
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