| Year |
Citation |
Score |
| 2024 |
King DE, Beard EE, Satusky MJ, Ryde I, George A, Johnson C, Dolan EL, Zhang Y, Zhu W, Wilkins H, Corden E, Murphy SK, Erie D, Gordân R, Meyer JN. TFAM as a sensor of UVC-induced mitochondrial DNA damage. Biorxiv : the Preprint Server For Biology. PMID 39484377 DOI: 10.1101/2024.10.24.620005 |
0.391 |
|
| 2024 |
Erie DA, Weninger KR. Combining single-molecule and structural studies reveals protein and DNA conformations and assemblies that govern DNA mismatch repair. Current Opinion in Structural Biology. 89: 102917. PMID 39260099 DOI: 10.1016/j.sbi.2024.102917 |
0.48 |
|
| 2023 |
Satusky MJ, Johnson CV, Erie DA. RAPID, INEXPENSIVE, SEQUENCE-INDEPENDENT FLUORESCENT LABELING OF PHOSPHOROTHIOATE DNA. Biophysical Journal. PMID 36793216 DOI: 10.1016/j.bpj.2023.02.011 |
0.381 |
|
| 2020 |
Hao P, LeBlanc SJ, Case BC, Elston TC, Hingorani MM, Erie DA, Weninger KR. Recurrent mismatch binding by MutS mobile clamps on DNA localizes repair complexes nearby. Proceedings of the National Academy of Sciences of the United States of America. PMID 32669440 DOI: 10.1073/Pnas.1918517117 |
0.523 |
|
| 2020 |
Bradford KC, Wilkins H, Hao P, Li ZM, Wang B, Burke D, Wu D, Smith AE, Spaller L, Du C, Gauer JW, Chan E, Hsieh P, Weninger KR, Erie DA. Dynamic human MutSα-MutLα complexes compact mismatched DNA. Proceedings of the National Academy of Sciences of the United States of America. PMID 32586954 DOI: 10.1073/Pnas.1918519117 |
0.849 |
|
| 2020 |
Andres SN, Li ZM, Erie DA, Williams RS. Correction: Ctp1 protein-DNA filaments promote DNA bridging and DNA double-strand break repair. The Journal of Biological Chemistry. 295: 896. PMID 31953249 DOI: 10.1074/Jbc.Aac119.012364 |
0.564 |
|
| 2019 |
Qiu R, DeRocco VC, Harris C, Sharma A, Hingorani MM, Erie DA, Weninger KR. Large conformational changes in MutS during DNA scanning, mismatch recognition and repair signaling. The Embo Journal. 38. PMID 30770383 DOI: 10.15252/embj.2019101518 |
0.825 |
|
| 2019 |
Biernat KA, Pellock SJ, Bhatt AP, Bivins MM, Walton WG, Tran BNT, Wei L, Snider MC, Cesmat AP, Tripathy A, Erie DA, Redinbo MR. Structure, function, and inhibition of drug reactivating human gut microbial β-glucuronidases. Scientific Reports. 9: 825. PMID 30696850 DOI: 10.1038/s41598-018-36069-w |
0.481 |
|
| 2019 |
Andres SN, Li ZM, Erie DA, Williams RS. Ctp1 protein-DNA filaments promote DNA Bridging and DNA double-strand break repair. The Journal of Biological Chemistry. PMID 30626735 DOI: 10.1074/Jbc.Ra118.006759 |
0.586 |
|
| 2019 |
Biernat KA, Pellock SJ, Bhatt AP, Bivins MM, Walton WG, Tran BNT, Wei L, Snider MC, Cesmat AP, Tripathy A, Erie DA, Redinbo MR. Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases. Scientific Reports. 9: 825-825. DOI: 10.2210/Pdb6Ed2/Pdb |
0.533 |
|
| 2019 |
Hao P, LeBlanc S, Erie DA, Weninger KR. Untangling DNA Mismatch Repair Complexes with smFRET and Tethered Particle Motion Analysis Biophysical Journal. 116: 77a. DOI: 10.1016/J.Bpj.2018.11.457 |
0.423 |
|
| 2019 |
LeBlanc SJ, Hao P, Hinds MA, Morgan AN, Gbozah K, Weninger KR, Erie DA. Investigating the Function of Mutl Conformational Changes in Mismatch Repair using smFRET Biophysical Journal. 116: 49a-50a. DOI: 10.1016/J.Bpj.2018.11.311 |
0.355 |
|
| 2018 |
Cannavo E, Johnson D, Andres SN, Kissling VM, Reinert JK, Garcia V, Erie DA, Hess D, Thomä NH, Enchev RI, Peter M, Williams RS, Neale MJ, Cejka P. Regulatory control of DNA end resection by Sae2 phosphorylation. Nature Communications. 9: 4016. PMID 30275497 DOI: 10.1038/S41467-018-06417-5 |
0.532 |
|
| 2018 |
LeBlanc SJ, Gauer JW, Hao P, Case BC, Hingorani MM, Weninger KR, Erie DA. Coordinated protein and DNA conformational changes govern mismatch repair initiation by MutS. Nucleic Acids Research. PMID 30272207 DOI: 10.1093/Nar/Gky865 |
0.851 |
|
| 2018 |
Hayne CK, Yumerefendi H, Cao L, Gauer JW, Lafferty MJ, Kuhlman B, Erie DA, Neher SB. We FRET so You Don't Have To: New Models of the Lipoprotein Lipase Dimer. Biochemistry. PMID 29303250 DOI: 10.1021/Acs.Biochem.7B01009 |
0.762 |
|
| 2018 |
Hao P, LeBlanc S, Erie D, Weninger K. Single Molecule Experiments Reveal Molecular Level Details of MutS-MutL Interactions in DNA Mismatch Activated Sliding Clamp Biophysical Journal. 114: 85a. DOI: 10.1016/J.Bpj.2017.11.508 |
0.474 |
|
| 2017 |
LeBlanc S, Wilkins H, Li Z, Kaur P, Wang H, Erie DA. Using Atomic Force Microscopy to Characterize the Conformational Properties of Proteins and Protein-DNA Complexes That Carry Out DNA Repair. Methods in Enzymology. 592: 187-212. PMID 28668121 DOI: 10.1016/Bs.Mie.2017.04.004 |
0.544 |
|
| 2017 |
Bellendir SP, Rognstad DJ, Morris LP, Zapotoczny G, Walton WG, Redinbo MR, Ramsden DA, Sekelsky J, Erie DA. Substrate preference of Gen endonucleases highlights the importance of branched structures as DNA damage repair intermediates. Nucleic Acids Research. PMID 28369583 DOI: 10.1093/Nar/Gkx214 |
0.617 |
|
| 2017 |
LeBlanc S, Gauer J, Hao P, Walser TY, Weninger K, Erie D. Dynamic Studies of MutS-MutL-DNA Complexes in Mismatch Repair Biophysical Journal. 112: 516a-517a. DOI: 10.1016/J.Bpj.2016.11.2793 |
0.828 |
|
| 2017 |
Hao P, Qiu R, Erie D, Weninger K. Mismatch Repair on the Go: Extending the Mechanical Model of DNA Mismatch Repair through Single Molecule Study Biophysical Journal. 112: 514a-515a. DOI: 10.1016/J.Bpj.2016.11.2782 |
0.514 |
|
| 2017 |
Erie D, Bradford K, Wilkins H, Bower J, Wang Z, Gauer J, Satusky M, Qiu R, Weninger K, Kaur P, Wang H. Single Molecule Fluorescence and Atomic Force Microscopy Studies of DNA Repair Biophysical Journal. 112: 7a. DOI: 10.1016/J.Bpj.2016.11.061 |
0.854 |
|
| 2016 |
Gauer JW, LeBlanc S, Hao P, Qiu R, Case BC, Sakato M, Hingorani MM, Erie DA, Weninger KR. Single-Molecule FRET to Measure Conformational Dynamics of DNA Mismatch Repair Proteins. Methods in Enzymology. 581: 285-315. PMID 27793283 DOI: 10.1016/Bs.Mie.2016.08.012 |
0.832 |
|
| 2016 |
Harrison JS, Cornett EM, Goldfarb D, DaRosa PA, Li ZM, Yan F, Dickson BM, Guo AH, Cantu DV, Kaustov L, Brown PJ, Arrowsmith CH, Erie DA, Major MB, Klevit RE, et al. Hemi-methylated DNA regulates DNA methylation inheritance through allosteric activation of H3 ubiquitylation by UHRF1. Elife. 5. PMID 27595565 DOI: 10.7554/Elife.17101 |
0.463 |
|
| 2016 |
Kaur P, Wu D, Lin J, Countryman P, Bradford KC, Erie DA, Riehn R, Opresko PL, Wang H. Enhanced electrostatic force microscopy reveals higher-order DNA looping mediated by the telomeric protein TRF2. Scientific Reports. 6: 20513. PMID 26856421 DOI: 10.1038/Srep20513 |
0.573 |
|
| 2016 |
Wu D, Kaur P, Li ZM, Bradford KC, Wang H, Erie DA. Visualizing the Path of DNA through Proteins Using DREEM Imaging. Molecular Cell. PMID 26774284 DOI: 10.1016/J.Molcel.2015.12.012 |
0.542 |
|
| 2016 |
Harrison JS, Cornett EM, Goldfarb D, DaRosa PA, Li ZM, Yan F, Dickson BM, Guo AH, Cantu DV, Kaustov L, Brown PJ, Arrowsmith CH, Erie DA, Major MB, Klevit RE, et al. Author response: Hemi-methylated DNA regulates DNA methylation inheritance through allosteric activation of H3 ubiquitylation by UHRF1 Elife. DOI: 10.7554/Elife.17101.024 |
0.426 |
|
| 2015 |
Vermulst M, Denney AS, Lang MJ, Hung CW, Moore S, Moseley MA, Thompson JW, Madden V, Gauer J, Wolfe KJ, Summers DW, Schleit J, Sutphin GL, Haroon S, Holczbauer A, ... ... Erie DA, et al. Corrigendum: Transcription errors induce proteotoxic stress and shorten cellular lifespan. Nature Communications. 6: 8738. PMID 26465398 DOI: 10.1038/Ncomms9738 |
0.736 |
|
| 2015 |
Kunkel TA, Erie DA. Eukaryotic Mismatch Repair in Relation to DNA Replication. Annual Review of Genetics. PMID 26436461 DOI: 10.1146/Annurev-Genet-112414-054722 |
0.519 |
|
| 2015 |
Vermulst M, Denney AS, Lang MJ, Hung CW, Moore S, Mosely AM, Thompson WJ, Madden V, Gauer J, Wolfe KJ, Summers DW, Schleit J, Sutphin GL, Haroon S, Holczbauer A, ... ... Erie DA, et al. Transcription errors induce proteotoxic stress and shorten cellular lifespan. Nature Communications. 6: 8065. PMID 26304740 DOI: 10.1038/Ncomms9065 |
0.746 |
|
| 2015 |
Qiu R, Sakato M, Sacho EJ, Wilkins H, Zhang X, Modrich P, Hingorani MM, Erie DA, Weninger KR. MutL traps MutS at a DNA mismatch. Proceedings of the National Academy of Sciences of the United States of America. 112: 10914-9. PMID 26283381 DOI: 10.1073/Pnas.1505655112 |
0.844 |
|
| 2014 |
Erie DA, Weninger KR. Single molecule studies of DNA mismatch repair. Dna Repair. 20: 71-81. PMID 24746644 DOI: 10.1016/J.Dnarep.2014.03.007 |
0.579 |
|
| 2014 |
DeRocco VC, Sass LE, Qiu R, Weninger KR, Erie DA. Dynamics of MutS-mismatched DNA complexes are predictive of their repair phenotypes. Biochemistry. 53: 2043-52. PMID 24588663 DOI: 10.1021/Bi401429B |
0.811 |
|
| 2013 |
Archer EJ, Simpson MA, Watts NJ, O'Kane R, Wang B, Erie DA, McPherson A, Weeks KM. Long-range architecture in a viral RNA genome. Biochemistry. 52: 3182-90. PMID 23614526 DOI: 10.1021/Bi4001535 |
0.302 |
|
| 2012 |
Qiu R, DeRocco VC, Harris C, Sharma A, Hingorani MM, Erie DA, Weninger KR. Large conformational changes in MutS during DNA scanning, mismatch recognition and repair signalling. The Embo Journal. 31: 2528-40. PMID 22505031 DOI: 10.1038/Emboj.2012.95 |
0.847 |
|
| 2012 |
Geng H, Sakato M, DeRocco V, Yamane K, Du C, Erie DA, Hingorani M, Hsieh P. Biochemical analysis of the human mismatch repair proteins hMutSα MSH2(G674A)-MSH6 and MSH2-MSH6(T1219D). The Journal of Biological Chemistry. 287: 9777-91. PMID 22277660 DOI: 10.1074/Jbc.M111.316919 |
0.809 |
|
| 2011 |
Kennedy SR, Erie DA. Templated nucleoside triphosphate binding to a noncatalytic site on RNA polymerase regulates transcription. Proceedings of the National Academy of Sciences of the United States of America. 108: 6079-84. PMID 21447716 DOI: 10.1073/Pnas.1011274108 |
0.374 |
|
| 2011 |
Fronczek DN, Quammen C, Wang H, Kisker C, Superfine R, Taylor R, Erie DA, Tessmer I. High accuracy FIONA-AFM hybrid imaging. Ultramicroscopy. 111: 350-5. PMID 21329649 DOI: 10.1016/J.Ultramic.2011.01.020 |
0.378 |
|
| 2011 |
Tsai HH, Huang CH, Tessmer I, Erie DA, Chen CW. Linear Streptomyces plasmids form superhelical circles through interactions between their terminal proteins. Nucleic Acids Research. 39: 2165-74. PMID 21109537 DOI: 10.1093/Nar/Gkq1204 |
0.471 |
|
| 2010 |
DeRocco V, Anderson T, Piehler J, Erie DA, Weninger K. Four-color single-molecule fluorescence with noncovalent dye labeling to monitor dynamic multimolecular complexes. Biotechniques. 49: 807-16. PMID 21091445 DOI: 10.2144/000113551 |
0.813 |
|
| 2010 |
Chelico L, Prochnow C, Erie DA, Chen XS, Goodman MF. Structural model for deoxycytidine deamination mechanisms of the HIV-1 inactivation enzyme APOBEC3G. The Journal of Biological Chemistry. 285: 16195-205. PMID 20212048 DOI: 10.1074/Jbc.M110.107987 |
0.387 |
|
| 2010 |
Sass LE, Lanyi C, Weninger K, Erie DA. Single-molecule FRET TACKLE reveals highly dynamic mismatched DNA-MutS complexes. Biochemistry. 49: 3174-90. PMID 20180598 DOI: 10.1021/Bi901871U |
0.84 |
|
| 2009 |
Erie DA, Kennedy SR. Forks, pincers, and triggers: the tools for nucleotide incorporation and translocation in multi-subunit RNA polymerases. Current Opinion in Structural Biology. 19: 708-14. PMID 19913407 DOI: 10.1016/J.Sbi.2009.10.008 |
0.345 |
|
| 2009 |
Weninger KR, Sass LE, DeRocco VC, Anderson T, Erie DA. DNA repair protein dynamics through single-molecule fluorescence Optics Infobase Conference Papers. |
0.804 |
|
| 2008 |
Tessmer I, Yang Y, Zhai J, Du C, Hsieh P, Hingorani MM, Erie DA. Mechanism of MutS searching for DNA mismatches and signaling repair. The Journal of Biological Chemistry. 283: 36646-54. PMID 18854319 DOI: 10.1074/Jbc.M805712200 |
0.592 |
|
| 2008 |
Wong OK, Guthold M, Erie DA, Gelles J. Interconvertible lac repressor-DNA loops revealed by single-molecule experiments. Plos Biology. 6: e232. PMID 18828671 DOI: 10.1371/Journal.Pbio.0060232 |
0.532 |
|
| 2008 |
Campbell JF, Tessmer I, Thorp HH, Erie DA. Atomic force microscopy studies of DNA-wrapped carbon nanotube structure and binding to quantum dots. Journal of the American Chemical Society. 130: 10648-55. PMID 18627153 DOI: 10.1021/Ja801720C |
0.496 |
|
| 2008 |
Wang H, Tessmer I, Croteau DL, Erie DA, Van Houten B. Functional characterization and atomic force microscopy of a DNA repair protein conjugated to a quantum dot. Nano Letters. 8: 1631-7. PMID 18444686 DOI: 10.1021/Nl080316L |
0.372 |
|
| 2008 |
Chelico L, Sacho EJ, Erie DA, Goodman MF. A model for oligomeric regulation of APOBEC3G cytosine deaminase-dependent restriction of HIV. The Journal of Biological Chemistry. 283: 13780-91. PMID 18362149 DOI: 10.1074/Jbc.M801004200 |
0.826 |
|
| 2008 |
Sacho EJ, Kadyrov FA, Modrich P, Kunkel TA, Erie DA. Direct visualization of asymmetric adenine-nucleotide-induced conformational changes in MutL alpha. Molecular Cell. 29: 112-21. PMID 18206974 DOI: 10.1016/J.Molcel.2007.10.030 |
0.788 |
|
| 2008 |
Brar SS, Sacho EJ, Tessmer I, Croteau DL, Erie DA, Diaz M. Activation-induced deaminase, AID, is catalytically active as a monomer on single-stranded DNA. Dna Repair. 7: 77-87. PMID 17889624 DOI: 10.1016/J.Dnarep.2007.08.002 |
0.851 |
|
| 2008 |
Sacho EJ, Tessmer I, Diaz M, Erie DA. Response to "Is AID a monomer in solution" Dna Repair. 7: 351-352. DOI: 10.1016/J.Dnarep.2007.11.004 |
0.741 |
|
| 2006 |
Lemaire PA, Tessmer I, Craig R, Erie DA, Cole JL. Unactivated PKR exists in an open conformation capable of binding nucleotides. Biochemistry. 45: 9074-84. PMID 16866353 DOI: 10.1021/Bi060567D |
0.337 |
|
| 2006 |
Holmes SF, Santangelo TJ, Cunningham CK, Roberts JW, Erie DA. Kinetic investigation of Escherichia coli RNA polymerase mutants that influence nucleotide discrimination and transcription fidelity. The Journal of Biological Chemistry. 281: 18677-83. PMID 16621791 DOI: 10.1074/Jbc.M600543200 |
0.776 |
|
| 2006 |
Wang H, DellaVecchia MJ, Skorvaga M, Croteau DL, Erie DA, Van Houten B. UvrB domain 4, an autoinhibitory gate for regulation of DNA binding and ATPase activity. The Journal of Biological Chemistry. 281: 15227-37. PMID 16595666 DOI: 10.1074/Jbc.M601476200 |
0.559 |
|
| 2006 |
Lamour V, Hogan BP, Erie DA, Darst SA. Crystal structure of Thermus aquaticus Gfh1, a Gre-factor paralog that inhibits rather than stimulates transcript cleavage. Journal of Molecular Biology. 356: 179-88. PMID 16337964 DOI: 10.1016/J.Jmb.2005.10.083 |
0.693 |
|
| 2005 |
Yang Y, Sass LE, Du C, Hsieh P, Erie DA. Determination of protein-DNA binding constants and specificities from statistical analyses of single molecules: MutS-DNA interactions. Nucleic Acids Research. 33: 4322-34. PMID 16061937 DOI: 10.1093/Nar/Gki708 |
0.838 |
|
| 2005 |
Kunkel TA, Erie DA. DNA mismatch repair. Annual Review of Biochemistry. 74: 681-710. PMID 15952900 DOI: 10.1146/Annurev.Biochem.74.082803.133243 |
0.534 |
|
| 2005 |
Tessmer I, Moore T, Lloyd RG, Wilson A, Erie DA, Allen S, Tendler SJ. AFM studies on the role of the protein RdgC in bacterial DNA recombination. Journal of Molecular Biology. 350: 254-62. PMID 15923011 DOI: 10.1016/J.Jmb.2005.04.043 |
0.579 |
|
| 2005 |
Brenowitz M, Erie DA, Chance MR. Catching RNA polymerase in the act of binding: intermediates in transcription illuminated by synchrotron footprinting. Proceedings of the National Academy of Sciences of the United States of America. 102: 4659-60. PMID 15781859 DOI: 10.1073/Pnas.0501152102 |
0.425 |
|
| 2004 |
Dwyer C, Vicci L, Poulton J, Erie D, Superfine R, Washburn S, Taylor RM. The design of DNA self-assembled computing circuitry Ieee Transactions On Very Large Scale Integration (Vlsi) Systems. 12: 1214-1220. DOI: 10.1109/Tvlsi.2004.836322 |
0.401 |
|
| 2003 |
Holmes SF, Foster JE, Erie DA. Kinetics of multisubunit RNA polymerases: experimental methods and data analysis. Methods in Enzymology. 371: 71-81. PMID 14712692 DOI: 10.1016/S0076-6879(03)71005-2 |
0.786 |
|
| 2003 |
Wang H, Yang Y, Schofield MJ, Du C, Fridman Y, Lee SD, Larson ED, Drummond JT, Alani E, Hsieh P, Erie DA. DNA bending and unbending by MutS govern mismatch recognition and specificity. Proceedings of the National Academy of Sciences of the United States of America. 100: 14822-7. PMID 14634210 DOI: 10.1073/Pnas.2433654100 |
0.585 |
|
| 2003 |
Holmes SF, Erie DA. Downstream DNA sequence effects on transcription elongation. Allosteric binding of nucleoside triphosphates facilitates translocation via a ratchet motion. The Journal of Biological Chemistry. 278: 35597-608. PMID 12813036 DOI: 10.1074/Jbc.M304496200 |
0.803 |
|
| 2003 |
Yang Y, Wang H, Erie DA. Quantitative characterization of biomolecular assemblies and interactions using atomic force microscopy. Methods (San Diego, Calif.). 29: 175-87. PMID 12606223 DOI: 10.1016/S1046-2023(02)00308-0 |
0.363 |
|
| 2003 |
Bao KK, Wang H, Miller JK, Erie DA, Skalka AM, Wong I. Functional oligomeric state of avian sarcoma virus integrase. The Journal of Biological Chemistry. 278: 1323-7. PMID 12446721 DOI: 10.1074/Jbc.C200550200 |
0.382 |
|
| 2002 |
Drotschmann K, Hall MC, Shcherbakova PV, Wang H, Erie DA, Brownewell FR, Kool ET, Kunkel TA. DNA binding properties of the yeast Msh2-Msh6 and Mlh1-Pms1 heterodimers. Biological Chemistry. 383: 969-75. PMID 12222686 DOI: 10.1515/Bc.2002.103 |
0.573 |
|
| 2002 |
Erie DA. The many conformational states of RNA polymerase elongation complexes and their roles in the regulation of transcription. Biochimica Et Biophysica Acta. 1577: 224-39. PMID 12213654 DOI: 10.1016/S0167-4781(02)00454-2 |
0.379 |
|
| 2002 |
Xue Y, Ratcliff GC, Wang H, Davis-Searles PR, Gray MD, Erie DA, Redinbo MR. A minimal exonuclease domain of WRN forms a hexamer on DNA and possesses both 3'- 5' exonuclease and 5'-protruding strand endonuclease activities. Biochemistry. 41: 2901-12. PMID 11863428 DOI: 10.1021/Bi0157161 |
0.823 |
|
| 2002 |
Hogan BP, Hartsch T, Erie DA. Transcript cleavage by Thermus thermophilus RNA polymerase. Effects of GreA and anti-GreA factors. The Journal of Biological Chemistry. 277: 967-75. PMID 11606592 DOI: 10.1074/Jbc.M108737200 |
0.684 |
|
| 2002 |
Dwyer C, Guthold M, Falvo M, Washburn S, Superfine R, Erie D. DNA-functionalized single-walled carbon nanotubes Nanotechnology. 13: 601-604. DOI: 10.1088/0957-4484/13/5/311 |
0.403 |
|
| 2002 |
Batalia MA, Protozanova E, Macgregor RB, Erie DA. Self-Assembly of Frayed Wires and Frayed-Wire Networks: Nanoconstruction with Multistranded DNA Nano Letters. 2: 269-274. DOI: 10.1021/Nl015672H |
0.402 |
|
| 2002 |
Wang H, Yang Y, Erie DA. Atomic force microscopy studies of initiation steps of DNA mismatch repair Microscopy and Microanalysis. 8: 762-763. |
0.362 |
|
| 2001 |
Guthold M, Erie DA. Single-molecule study reveals a complex E. coli RNA polymerase. Chembiochem : a European Journal of Chemical Biology. 2: 167-70. PMID 11828441 DOI: 10.1002/1439-7633(20010302)2:3<167::Aid-Cbic167>3.0.Co;2-S |
0.327 |
|
| 2001 |
Hall MC, Wang H, Erie DA, Kunkel TA. High affinity cooperative DNA binding by the yeast Mlh1-Pms1 heterodimer. Journal of Molecular Biology. 312: 637-47. PMID 11575920 DOI: 10.1006/Jmbi.2001.4958 |
0.567 |
|
| 2001 |
Foster JE, Holmes SF, Erie DA. Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation. Cell. 106: 243-52. PMID 11511351 DOI: 10.1016/S0092-8674(01)00420-2 |
0.76 |
|
| 2001 |
Ratcliff GC, Erie DA. A novel single-molecule study to determine protein--protein association constants. Journal of the American Chemical Society. 123: 5632-5. PMID 11403593 DOI: 10.1021/Ja005750N |
0.774 |
|
| 2001 |
Davis-Searles PR, Saunders AJ, Erie DA, Winzor DJ, Pielak GJ. Interpreting the effects of small uncharged solutes on protein-folding equilibria. Annual Review of Biophysics and Biomolecular Structure. 30: 271-306. PMID 11340061 DOI: 10.1146/Annurev.Biophys.30.1.271 |
0.329 |
|
| 2000 |
Xue Y, Hogan BP, Erie DA. Purification and initial characterization of RNA polymerase from Thermus thermophilus strain HB8. Biochemistry. 39: 14356-62. PMID 11087385 DOI: 10.1021/Bi0012538 |
0.738 |
|
| 2000 |
Saunders AJ, Davis-Searles PR, Allen DL, Pielak GJ, Erie DA. Osmolyte-induced changes in protein conformational equilibria. Biopolymers. 53: 293-307. PMID 10685050 DOI: 10.1002/(Sici)1097-0282(20000405)53:4<293::Aid-Bip2>3.0.Co;2-T |
0.346 |
|
| 1999 |
Guthold M, Falvo M, Matthews WG, Paulson S, Mullin J, Lord S, Erie D, Washburn S, Superfine R, Brooks FP, Taylor RM. Investigation and modification of molecular structures with the nanoManipulator. Journal of Molecular Graphics & Modelling. 17: 187-97. PMID 10736776 DOI: 10.1016/S1093-3263(99)00030-3 |
0.338 |
|
| 1999 |
Erie D, Ratcliff G, Guthold M, Bullock V, Pliske M, Superfine R, Taylor R. Scanning Force Microscopy and Nanomangulation: Studies of Dna and Proteins Involved in Dna Repair Microscopy and Microanalysis. 5: 1004-1005. DOI: 10.1017/S1431927600018341 |
0.827 |
|
| 1999 |
Guthold M, Matthews G, Negishi A, Taylor RM, Erie D, Brooks FP, Superfine R. Quantitative manipulation of DNA and viruses with the nanomanipulator scanning force microscope Surface and Interface Analysis. 27: 437-443. DOI: 10.1002/(Sici)1096-9918(199905/06)27:5/6<437::Aid-Sia505>3.0.Co;2-N |
0.372 |
|
| 1998 |
Davis-Searles PR, Morar AS, Saunders AJ, Erie DA, Pielak GJ. Sugar-induced molten-globule model. Biochemistry. 37: 17048-53. PMID 9836600 DOI: 10.1021/Bi981364V |
0.319 |
|
| 1998 |
Ratcliff GC, Erie DA, Superfine R. Photothermal modulation for oscillating mode atomic force microscopy in solution Applied Physics Letters. 72: 1911-1913. DOI: 10.1063/1.121224 |
0.744 |
|
| 1994 |
Erie DA, Yang G, Schultz HC, Bustamante C. DNA bending by Cro protein in specific and nonspecific complexes: implications for protein site recognition and specificity. Science (New York, N.Y.). 266: 1562-6. PMID 7985026 DOI: 10.1126/Science.7985026 |
0.606 |
|
| 1994 |
Guthold M, Bezanilla M, Erie DA, Jenkins B, Hansma HG, Bustamante C. Following the assembly of RNA polymerase-DNA complexes in aqueous solutions with the scanning force microscope. Proceedings of the National Academy of Sciences of the United States of America. 91: 12927-31. PMID 7809148 DOI: 10.1073/Pnas.91.26.12927 |
0.644 |
|
| 1994 |
Bustamante C, Erie DA, Keller D. Biochemical and structural applications of scanning force microscopy Current Opinion in Structural Biology. 4: 750-760. DOI: 10.1016/S0959-440X(94)90175-9 |
0.487 |
|
| 1993 |
Erie DA, Breslauer KJ, Olson WK. A Monte Carlo method for generating structures of short single-stranded DNA sequences. Biopolymers. 33: 75-105. PMID 8427940 DOI: 10.1002/Bip.360330109 |
0.692 |
|
| 1993 |
Erie DA, Suri AK, Breslauer KJ, Jones RA, Olson WK. Theoretical predictions of DNA hairpin loop conformations: correlations with thermodynamic and spectroscopic data. Biochemistry. 32: 436-54. PMID 8422353 DOI: 10.1021/Bi00053A008 |
0.72 |
|
| 1993 |
Erie DA, Hajiseyedjavadi O, Young MC, von Hippel PH. Multiple RNA polymerase conformations and GreA: control of the fidelity of transcription. Science (New York, N.Y.). 262: 867-73. PMID 8235608 DOI: 10.1126/Science.8235608 |
0.576 |
|
| 1992 |
Erie DA, Yager TD, von Hippel PH. The single-nucleotide addition cycle in transcription: a biophysical and biochemical perspective. Annual Review of Biophysics and Biomolecular Structure. 21: 379-415. PMID 1381976 DOI: 10.1146/Annurev.Bb.21.060192.002115 |
0.554 |
|
| 1989 |
Erie DA, Jones RA, Olson WK, Sinha NK, Breslauer KJ. Melting behavior of a covalently closed, single-stranded, circular DNA. Biochemistry. 28: 268-73. PMID 2706250 DOI: 10.1021/Bi00427A037 |
0.748 |
|
| 1987 |
Erie D, Sinha N, Olson W, Jones R, Breslauer K. A dumbbell-shaped, double-hairpin structure of DNA: A thermodynamic investigation Biochemistry. 26: 7150-7159. PMID 3427065 DOI: 10.1021/Bi00396A042 |
0.691 |
|
| Show low-probability matches. |
