Ben E. Black - Publications

Biochemistry and Biophysics University of Pennsylvania, Philadelphia, PA, United States 
centromeric proteins

70 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Gambogi CW, Dawicki-McKenna JM, Logsdon GA, Black BE. The unique kind of human artificial chromosome: Bypassing the requirement for repetitive centromere DNA. Experimental Cell Research. 111978. PMID 32246994 DOI: 10.1016/J.Yexcr.2020.111978  0.76
2019 Allu PK, Dawicki-McKenna JM, Van Eeuwen T, Slavin M, Braitbard M, Xu C, Kalisman N, Murakami K, Black BE. Structure of the Human Core Centromeric Nucleosome Complex. Current Biology : Cb. PMID 31353180 DOI: 10.1016/J.Cub.2019.06.062  0.32
2019 Logsdon GA, Gambogi CW, Liskovykh MA, Barrey EJ, Larionov V, Miga KH, Heun P, Black BE. Human Artificial Chromosomes that Bypass Centromeric DNA. Cell. 178: 624-639.e19. PMID 31348889 DOI: 10.1016/J.Cell.2019.06.006  0.76
2019 Gambogi CW, Black BE. The nucleosomes that mark centromere location on chromosomes old and new. Essays in Biochemistry. 63: 15-27. PMID 31015381 DOI: 10.1042/Ebc20180060  0.32
2019 Barra V, Logsdon GA, Scelfo A, Hoffmann S, Hervé S, Aslanian A, Nechemia-Arbely Y, Cleveland DW, Black BE, Fachinetti D. Phosphorylation of CENP-A on serine 7 does not control centromere function. Nature Communications. 10: 175. PMID 30635586 DOI: 10.1038/S41467-018-08073-1  0.76
2019 Dawicki-McKenna JM, Black BE. Chromosomes: Keeping Centromeric Chromatin Tidy through S Phase. Current Biology : Cb. 29: R35-R37. PMID 30620916 DOI: 10.1016/J.Cub.2018.11.044  0.32
2018 Zasadzińska E, Huang J, Bailey AO, Guo LY, Lee NS, Srivastava S, Wong KA, French BT, Black BE, Foltz DR. Inheritance of CENP-A Nucleosomes during DNA Replication Requires HJURP. Developmental Cell. PMID 30293838 DOI: 10.1016/J.Devcel.2018.09.003  0.36
2018 Logsdon GA, Black BE. The new normal of structure/function studies in the era of CRISPR/Cas9. The Biochemical Journal. 475: 1635-1642. PMID 29764955 DOI: 10.1042/Bcj20170025  0.76
2017 Iwata-Otsubo A, Dawicki-McKenna JM, Akera T, Falk SJ, Chmátal L, Yang K, Sullivan BA, Schultz RM, Lampson MA, Black BE. Expanded Satellite Repeats Amplify a Discrete CENP-A Nucleosome Assembly Site on Chromosomes that Drive in Female Meiosis. Current Biology : Cb. PMID 28756949 DOI: 10.1016/J.Cub.2017.06.069  0.32
2017 Guo LY, Allu PK, Zandarashvili L, McKinley KL, Sekulic N, Dawicki-McKenna JM, Fachinetti D, Logsdon GA, Jamiolkowski RM, Cleveland DW, Cheeseman IM, Black BE. Centromeres are maintained by fastening CENP-A to DNA and directing an arginine anchor-dependent nucleosome transition. Nature Communications. 8: 15775. PMID 28598437 DOI: 10.1038/Ncomms15775  0.76
2017 Nechemia-Arbely Y, Fachinetti D, Miga KH, Sekulic N, Soni GV, Kim DH, Wong AK, Lee AY, Nguyen K, Dekker C, Ren B, Black BE, Cleveland DW. Human centromeric CENP-A chromatin is a homotypic, octameric nucleosome at all cell cycle points. The Journal of Cell Biology. PMID 28235947 DOI: 10.1083/Jcb.201608083  0.76
2017 Fachinetti D, Logsdon GA, Abdullah A, Selzer EB, Cleveland DW, Black BE. CENP-A Modifications on Ser68 and Lys124 Are Dispensable for Establishment, Maintenance, and Long-Term Function of Human Centromeres. Developmental Cell. 40: 104-113. PMID 28073008 DOI: 10.1016/J.Devcel.2016.12.014  0.76
2016 Stankovic A, Guo LY, Mata JF, Bodor DL, Cao XJ, Bailey AO, Shabanowitz J, Hunt DF, Garcia BA, Black BE, Jansen LE. A Dual Inhibitory Mechanism Sufficient to Maintain Cell-Cycle-Restricted CENP-A Assembly. Molecular Cell. PMID 28017591 DOI: 10.1016/J.Molcel.2016.11.021  0.36
2016 Avgousti DC, Herrmann C, Kulej K, Pancholi NJ, Sekulic N, Petrescu J, Molden RC, Blumenthal D, Paris AJ, Reyes ED, Ostapchuk P, Hearing P, Seeholzer SH, Worthen GS, Black BE, et al. A core viral protein binds host nucleosomes to sequester immune danger signals. Nature. PMID 27362237 DOI: 10.1038/nature18317  0.96
2016 Smoak EM, Stein P, Schultz RM, Lampson MA, Black BE. Long-Term Retention of CENP-A Nucleosomes in Mammalian Oocytes Underpins Transgenerational Inheritance of Centromere Identity. Current Biology : Cb. PMID 27040782 DOI: 10.1016/J.Cub.2016.02.061  0.96
2016 Falk SJ, Lee J, Sekulic N, Sennett MA, Lee TH, Black BE. CENP-C directs a structural transition of CENP-A nucleosomes mainly through sliding of DNA gyres. Nature Structural & Molecular Biology. PMID 26878239 DOI: 10.1038/Nsmb.3175  0.96
2016 Zaytsev AV, Segura-Peña D, Godzi M, Calderon A, Ballister ER, Stamatov R, Mayo AM, Peterson L, Black BE, Ataullakhanov FI, Lampson MA, Grishchuk EL. Bistability of a coupled Aurora B kinase-phosphatase system in cell division. Elife. 5. PMID 26765564 DOI: 10.7554/Elife.10644  0.96
2015 McKinley KL, Sekulic N, Guo LY, Tsinman T, Black BE, Cheeseman IM. The CENP-L-N Complex Forms a Critical Node in an Integrated Meshwork of Interactions at the Centromere-Kinetochore Interface. Molecular Cell. 60: 886-98. PMID 26698661 DOI: 10.1016/J.Molcel.2015.10.027  0.96
2015 Bailey AO, Panchenko T, Shabanowitz J, Lehman SM, Bai DL, Hunt DF, Black BE, Foltz DR. Identification of the posttranslational modifications present in centromeric chromatin. Molecular & Cellular Proteomics : McP. PMID 26685127 DOI: 10.1074/Mcp.M115.053710  0.96
2015 Dawicki-McKenna JM, Langelier MF, DeNizio JE, Riccio AA, Cao CD, Karch KR, McCauley M, Steffen JD, Black BE, Pascal JM. PARP-1 Activation Requires Local Unfolding of an Autoinhibitory Domain. Molecular Cell. PMID 26626480 DOI: 10.1016/J.Molcel.2015.10.013  0.96
2015 Wei S, Falk SJ, Black BE, Lee TH. A novel hybrid single molecule approach reveals spontaneous DNA motion in the nucleosome. Nucleic Acids Research. PMID 26013809 DOI: 10.1093/Nar/Gkv549  0.96
2015 Falk SJ, Guo LY, Sekulic N, Smoak EM, Mani T, Logsdon GA, Gupta K, Jansen LE, Van Duyne GD, Vinogradov SA, Lampson MA, Black BE. Chromosomes. CENP-C reshapes and stabilizes CENP-A nucleosomes at the centromere. Science (New York, N.Y.). 348: 699-703. PMID 25954010 DOI: 10.1126/Science.1259308  0.96
2015 Logsdon GA, Barrey EJ, Bassett EA, DeNizio JE, Guo LY, Panchenko T, Dawicki-McKenna JM, Heun P, Black BE. Both tails and the centromere targeting domain of CENP-A are required for centromere establishment. The Journal of Cell Biology. 208: 521-31. PMID 25713413 DOI: 10.1083/Jcb.201412011  0.96
2014 Bodor DL, Mata JF, Sergeev M, David AF, Salimian KJ, Panchenko T, Cleveland DW, Black BE, Shah JV, Jansen LE. The quantitative architecture of centromeric chromatin. Elife. 3: e02137. PMID 25027692 DOI: 10.7554/Elife.02137  0.76
2014 Geiss CP, Keramisanou D, Sekulic N, Scheffer MP, Black BE, Frangakis AS. CENP-A arrays are more condensed than canonical arrays at low ionic strength. Biophysical Journal. 106: 875-82. PMID 24559990 DOI: 10.1016/J.Bpj.2014.01.005  0.96
2014 DeNizio JE, Elsässer SJ, Black BE. DAXX co-folds with H3.3/H4 using high local stability conferred by the H3.3 variant recognition residues. Nucleic Acids Research. 42: 4318-31. PMID 24493739 DOI: 10.1093/Nar/Gku090  0.96
2014 Bodor DL, Mata JF, Sergeev M, David AF, Salimian KJ, Panchenko T, Cleveland DW, Black BE, Shah JV, Jansen LET. The quantitative architecture of centromeric chromatin Elife. 2014. DOI: 10.7554/eLife.02137  0.96
2013 Falk SJ, Black BE. Centromeric chromatin and the pathway that drives its propagation. Biochimica Et Biophysica Acta. 1819: 313-21. PMID 24459733 DOI: 10.1016/j.bbagrm.2011.11.002  0.96
2013 Karch KR, Denizio JE, Black BE, Garcia BA. Identification and interrogation of combinatorial histone modifications. Frontiers in Genetics. 4: 264. PMID 24391660 DOI: 10.3389/Fgene.2013.00264  0.96
2013 D'Arcy S, Martin KW, Panchenko T, Chen X, Bergeron S, Stargell LA, Black BE, Luger K. Chaperone Nap1 shields histone surfaces used in a nucleosome and can put H2A-H2B in an unconventional tetrameric form. Molecular Cell. 51: 662-77. PMID 23973327 DOI: 10.1016/J.Molcel.2013.07.015  0.96
2013 Bailey AO, Panchenko T, Sathyan KM, Petkowski JJ, Pai PJ, Bai DL, Russell DH, Macara IG, Shabanowitz J, Hunt DF, Black BE, Foltz DR. Posttranslational modification of CENP-A influences the conformation of centromeric chromatin. Proceedings of the National Academy of Sciences of the United States of America. 110: 11827-32. PMID 23818633 DOI: 10.1073/Pnas.1300325110  0.96
2013 Hasson D, Panchenko T, Salimian KJ, Salman MU, Sekulic N, Alonso A, Warburton PE, Black BE. The octamer is the major form of CENP-A nucleosomes at human centromeres. Nature Structural & Molecular Biology. 20: 687-95. PMID 23644596 DOI: 10.1038/Nsmb.2562  0.96
2013 Earnshaw WC, Allshire RC, Black BE, Bloom K, Brinkley BR, Brown W, Cheeseman IM, Choo KH, Copenhaver GP, Deluca JG, Desai A, Diekmann S, Erhardt S, Fitzgerald-Hayes M, Foltz D, et al. Esperanto for histones: CENP-A, not CenH3, is the centromeric histone H3 variant. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 21: 101-6. PMID 23580138 DOI: 10.1007/S10577-013-9347-Y  0.96
2013 Bodor DL, Valente LP, Mata JF, Black BE, Jansen LE. Assembly in G1 phase and long-term stability are unique intrinsic features of CENP-A nucleosomes. Molecular Biology of the Cell. 24: 923-32. PMID 23363600 DOI: 10.1091/Mbc.E13-01-0034  0.96
2012 Skinner JJ, Lim WK, Bédard S, Black BE, Englander SW. Protein hydrogen exchange: testing current models. Protein Science : a Publication of the Protein Society. 21: 987-95. PMID 22544567 DOI: 10.1002/Pro.2082  0.96
2012 Skinner JJ, Lim WK, Bédard S, Black BE, Englander SW. Protein dynamics viewed by hydrogen exchange. Protein Science : a Publication of the Protein Society. 21: 996-1005. PMID 22544544 DOI: 10.1002/Pro.2081  0.96
2012 Sekulic N, Black BE. Molecular underpinnings of centromere identity and maintenance. Trends in Biochemical Sciences. 37: 220-9. PMID 22410197 DOI: 10.1016/J.Tibs.2012.01.003  0.96
2012 Bassett EA, DeNizio J, Barnhart-Dailey MC, Panchenko T, Sekulic N, Rogers DJ, Foltz DR, Black BE. HJURP uses distinct CENP-A surfaces to recognize and to stabilize CENP-A/histone H4 for centromere assembly. Developmental Cell. 22: 749-62. PMID 22406139 DOI: 10.1016/J.Devcel.2012.02.001  0.96
2011 Panchenko T, Sorensen TC, Woodcock CL, Kan ZY, Wood S, Resch MG, Luger K, Englander SW, Hansen JC, Black BE. Replacement of histone H3 with CENP-A directs global nucleosome array condensation and loosening of nucleosome superhelical termini. Proceedings of the National Academy of Sciences of the United States of America. 108: 16588-93. PMID 21949362 DOI: 10.1073/Pnas.1113621108  0.96
2011 Barnhart MC, Kuich PH, Stellfox ME, Ward JA, Bassett EA, Black BE, Foltz DR. HJURP is a CENP-A chromatin assembly factor sufficient to form a functional de novo kinetochore. The Journal of Cell Biology. 194: 229-43. PMID 21768289 DOI: 10.1083/Jcb.201012017  0.96
2011 Salimian KJ, Ballister ER, Smoak EM, Wood S, Panchenko T, Lampson MA, Black BE. Feedback control in sensing chromosome biorientation by the Aurora B kinase. Current Biology : Cb. 21: 1158-65. PMID 21723127 DOI: 10.1016/J.Cub.2011.06.015  0.96
2011 Hansen JC, Wexler BB, Rogers DJ, Hite KC, Panchenko T, Ajith S, Black BE. DNA binding restricts the intrinsic conformational flexibility of methyl CpG binding protein 2 (MeCP2). The Journal of Biological Chemistry. 286: 18938-48. PMID 21467044 DOI: 10.1074/Jbc.M111.234609  0.96
2011 Black BE, Cleveland DW. Epigenetic centromere propagation and the nature of CENP-a nucleosomes. Cell. 144: 471-9. PMID 21335232 DOI: 10.1016/J.Cell.2011.02.002  0.96
2010 Black BE, Jansen LE, Foltz DR, Cleveland DW. Centromere identity, function, and epigenetic propagation across cell divisions. Cold Spring Harbor Symposia On Quantitative Biology. 75: 403-18. PMID 21467140 DOI: 10.1101/Sqb.2010.75.038  0.96
2010 Sekulic N, Bassett EA, Rogers DJ, Black BE. The structure of (CENP-A-H4)(2) reveals physical features that mark centromeres. Nature. 467: 347-51. PMID 20739937 DOI: 10.1038/Nature09323  0.96
2010 Bassett EA, Wood S, Salimian KJ, Ajith S, Foltz DR, Black BE. Epigenetic centromere specification directs aurora B accumulation but is insufficient to efficiently correct mitotic errors. The Journal of Cell Biology. 190: 177-85. PMID 20643881 DOI: 10.1083/Jcb.201001035  0.96
2009 Sekulic N, Black BE. A reader for centromeric chromatin. Nature Cell Biology. 11: 793-5. PMID 19568265 DOI: 10.1038/Ncb0709-793  0.96
2009 Panchenko T, Black BE. The epigenetic basis for centromere identity. Progress in Molecular and Subcellular Biology. 48: 1-32. PMID 19521810 DOI: 10.1007/978-3-642-00182-6_1  0.96
2009 Foltz DR, Jansen LE, Bailey AO, Yates JR, Bassett EA, Wood S, Black BE, Cleveland DW. Centromere-specific assembly of CENP-a nucleosomes is mediated by HJURP. Cell. 137: 472-84. PMID 19410544 DOI: 10.1016/J.Cell.2009.02.039  0.96
2008 Skinner JJ, Wood S, Shorter J, Englander SW, Black BE. The Mad2 partial unfolding model: regulating mitosis through Mad2 conformational switching. The Journal of Cell Biology. 183: 761-8. PMID 19029339 DOI: 10.1083/Jcb.200808122  0.96
2008 Black BE, Bassett EA. The histone variant CENP-A and centromere specification. Current Opinion in Cell Biology. 20: 91-100. PMID 18226513 DOI: 10.1016/J.Ceb.2007.11.007  0.96
2007 Conde e Silva N, Black BE, Sivolob A, Filipski J, Cleveland DW, Prunell A. CENP-A-containing nucleosomes: easier disassembly versus exclusive centromeric localization. Journal of Molecular Biology. 370: 555-73. PMID 17524417 DOI: 10.1016/J.Jmb.2007.04.064  0.96
2007 Black BE, Brock MA, Bédard S, Woods VL, Cleveland DW. An epigenetic mark generated by the incorporation of CENP-A into centromeric nucleosomes. Proceedings of the National Academy of Sciences of the United States of America. 104: 5008-13. PMID 17360341 DOI: 10.1073/Pnas.0700390104  0.96
2007 Jansen LE, Black BE, Foltz DR, Cleveland DW. Propagation of centromeric chromatin requires exit from mitosis. The Journal of Cell Biology. 176: 795-805. PMID 17339380 DOI: 10.1083/Jcb.200701066  0.96
2007 Black BE, Jansen LE, Maddox PS, Foltz DR, Desai AB, Shah JV, Cleveland DW. Centromere identity maintained by nucleosomes assembled with histone H3 containing the CENP-A targeting domain. Molecular Cell. 25: 309-22. PMID 17244537 DOI: 10.1016/J.Molcel.2006.12.018  0.96
2006 Foltz DR, Jansen LE, Black BE, Bailey AO, Yates JR, Cleveland DW. The human CENP-A centromeric nucleosome-associated complex. Nature Cell Biology. 8: 458-69. PMID 16622419 DOI: 10.1038/Ncb1397  0.96
2006 Gioeli D, Black BE, Gordon V, Spencer A, Kesler CT, Eblen ST, Paschal BM, Weber MJ. Stress kinase signaling regulates androgen receptor phosphorylation, transcription, and localization. Molecular Endocrinology (Baltimore, Md.). 20: 503-15. PMID 16282370 DOI: 10.1210/Me.2005-0351  0.96
2005 Afshar N, Black BE, Paschal BM. Retrotranslocation of the chaperone calreticulin from the endoplasmic reticulum lumen to the cytosol. Molecular and Cellular Biology. 25: 8844-53. PMID 16199864 DOI: 10.1128/Mcb.25.20.8844-8853.2005  0.96
2004 Black BE, Paschal BM. Intranuclear organization and function of the androgen receptor. Trends in Endocrinology and Metabolism: Tem. 15: 411-7. PMID 15519887 DOI: 10.1016/J.Tem.2004.09.006  0.96
2004 Black BE, Foltz DR, Chakravarthy S, Luger K, Woods VL, Cleveland DW. Structural determinants for generating centromeric chromatin. Nature. 430: 578-82. PMID 15282608 DOI: 10.1038/Nature02766  0.96
2004 Black BE, Vitto MJ, Gioeli D, Spencer A, Afshar N, Conaway MR, Weber MJ, Paschal BM. Transient, ligand-dependent arrest of the androgen receptor in subnuclear foci alters phosphorylation and coactivator interactions. Molecular Endocrinology (Baltimore, Md.). 18: 834-50. PMID 14684849 DOI: 10.1210/Me.2003-0145  0.96
2002 Holaska JM, Black BE, Rastinejad F, Paschal BM. Ca2+-dependent nuclear export mediated by calreticulin. Molecular and Cellular Biology. 22: 6286-97. PMID 12167720 DOI: 10.1128/Mcb.22.17.6286-6297.2002  0.96
2001 Black BE, Holaska JM, Rastinejad F, Paschal BM. DNA binding domains in diverse nuclear receptors function as nuclear export signals. Current Biology : Cb. 11: 1749-58. PMID 11719216 DOI: 10.1016/S0960-9822(01)00537-1  0.96
2001 Lévesque L, Guzik B, Guan T, Coyle J, Black BE, Rekosh D, Hammarskjöld ML, Paschal BM. RNA export mediated by tap involves NXT1-dependent interactions with the nuclear pore complex. The Journal of Biological Chemistry. 276: 44953-62. PMID 11579093 DOI: 10.1074/Jbc.M106558200  0.96
2001 Guzik BW, Levesque L, Prasad S, Bor YC, Black BE, Paschal BM, Rekosh D, Hammarskjöld ML. NXT1 (p15) is a crucial cellular cofactor in TAP-dependent export of intron-containing RNA in mammalian cells. Molecular and Cellular Biology. 21: 2545-54. PMID 11259602 DOI: 10.1128/Mcb.21.7.2545-2554.2001  0.96
2001 Black BE, Holaska JM, Lévesque L, Ossareh-Nazari B, Gwizdek C, Dargemont C, Paschal BM. NXT1 is necessary for the terminal step of Crm1-mediated nuclear export. The Journal of Cell Biology. 152: 141-55. PMID 11149927 DOI: 10.1083/Jcb.152.1.141  0.96
2001 Holaska JM, Black BE, Love DC, Hanover JA, Leszyk J, Paschal BM. Calreticulin Is a receptor for nuclear export. The Journal of Cell Biology. 152: 127-40. PMID 11149926 DOI: 10.1083/Jcb.152.1.127  0.96
2000 Ossareh-Nazari B, Maison C, Black BE, Lévesque L, Paschal BM, Dargemont C. RanGTP-binding protein NXT1 facilitates nuclear export of different classes of RNA in vitro. Molecular and Cellular Biology. 20: 4562-71. PMID 10848583 DOI: 10.1128/Mcb.20.13.4562-4571.2000  0.96
2000 Steggerda SM, Black BE, Paschal BM. Monoclonal antibodies to NTF2 inhibit nuclear protein import by preventing nuclear translocation of the GTPase Ran. Molecular Biology of the Cell. 11: 703-19. PMID 10679025 DOI: 10.1091/Mbc.11.2.703  0.96
1999 Black BE, Lévesque L, Holaska JM, Wood TC, Paschal BM. Identification of an NTF2-related factor that binds Ran-GTP and regulates nuclear protein export. Molecular and Cellular Biology. 19: 8616-24. PMID 10567585 DOI: 10.1128/Mcb.19.12.8616  0.96
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