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Colin E. Aitken, Ph.D. - Publications

Affiliations: 
2010 Stanford University, Palo Alto, CA 
Area:
the role of RNA in cellular processes and disease
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18/41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Stanciu A, Luo J, Funes L, Galbokke Hewage S, Aitken CE. eIF3 and Its mRNA-Entry-Channel Arm Contribute to the Recruitment of mRNAs With Long 5'-Untranslated Regions. Frontiers in Molecular Biosciences. 8: 787664. PMID 35087868 DOI: 10.3389/fmolb.2021.787664  0.36
2017 Yourik P, Aitken CE, Zhou F, Gupta N, Hinnebusch AG, Lorsch JR. Yeast eIF4A enhances recruitment of mRNAs regardless of their structural complexity. Elife. 6. PMID 29192585 DOI: 10.7554/Elife.31476  0.471
2017 Dong J, Aitken CE, Thakur A, Shin BS, Lorsch JR, Hinnebusch AG. Rps3/uS3 promotes mRNA binding at the 40S ribosome entry channel and stabilizes preinitiation complexes at start codons. Proceedings of the National Academy of Sciences of the United States of America. PMID 28223523 DOI: 10.1073/Pnas.1620569114  0.422
2017 Yourik P, Aitken CE, Zhou F, Gupta N, Hinnebusch AG, Lorsch JR. Author response: Yeast eIF4A enhances recruitment of mRNAs regardless of their structural complexity Elife. DOI: 10.7554/Elife.31476.024  0.365
2016 Aitken CE, Beznosková P, Vlčkova V, Chiu WL, Zhou F, Valášek LS, Hinnebusch AG, Lorsch JR. Eukaryotic translation initiation factor 3 plays distinct roles at the mRNA entry and exit channels of the ribosomal preinitiation complex. Elife. 5. PMID 27782884 DOI: 10.7554/Elife.20934  0.39
2016 Aitken CE, Beznosková P, Vlčkova V, Chiu W, Zhou F, Valášek LS, Hinnebusch AG, Lorsch JR. Author response: Eukaryotic translation initiation factor 3 plays distinct roles at the mRNA entry and exit channels of the ribosomal preinitiation complex Elife. DOI: 10.7554/Elife.20934.027  0.378
2015 Llácer JL, Hussain T, Marler L, Aitken CE, Thakur A, Lorsch JR, Hinnebusch AG, Ramakrishnan V. Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex. Molecular Cell. 59: 399-412. PMID 26212456 DOI: 10.1016/J.Molcel.2015.06.033  0.462
2013 Tsai A, Uemura S, Johansson M, Puglisi EV, Marshall RA, Aitken CE, Korlach J, Ehrenberg M, Puglisi JD. The impact of aminoglycosides on the dynamics of translation elongation. Cell Reports. 3: 497-508. PMID 23416053 DOI: 10.1016/J.Celrep.2013.01.027  0.619
2012 Aitken CE, Lorsch JR. A mechanistic overview of translation initiation in eukaryotes. Nature Structural & Molecular Biology. 19: 568-76. PMID 22664984 DOI: 10.1038/nsmb.2303  0.359
2010 Lucent D, Snow CD, Aitken CE, Pande VS. Non-bulk-like solvent behavior in the ribosome exit tunnel Plos Computational Biology. 6. PMID 20975935 DOI: 10.1371/Journal.Pcbi.1000963  0.416
2010 Aitken CE, Puglisi JD. Following the intersubunit conformation of the ribosome during translation in real time. Nature Structural & Molecular Biology. 17: 793-800. PMID 20562856 DOI: 10.1038/Nsmb.1828  0.629
2010 Uemura S, Aitken CE, Korlach J, Flusberg BA, Turner SW, Puglisi JD. Real-time tRNA transit on single translating ribosomes at codon resolution. Nature. 464: 1012-7. PMID 20393556 DOI: 10.1038/Nature08925  0.646
2010 Aitken CE, Petrov A, Puglisi JD. Single ribosome dynamics and the mechanism of translation. Annual Review of Biophysics. 39: 491-513. PMID 20192783 DOI: 10.1146/Annurev.Biophys.093008.131427  0.7
2009 Marshall RA, Aitken CE, Puglisi JD. GTP hydrolysis by IF2 guides progression of the ribosome into elongation. Molecular Cell. 35: 37-47. PMID 19595714 DOI: 10.1016/J.Molcel.2009.06.008  0.606
2008 Marshall RA, Aitken CE, Dorywalska M, Puglisi JD. Translation at the single-molecule level. Annual Review of Biochemistry. 77: 177-203. PMID 18518820 DOI: 10.1146/Annurev.Biochem.77.070606.101431  0.625
2008 Aitken CE, Marshall RA, Puglisi JD. An oxygen scavenging system for improvement of dye stability in single-molecule fluorescence experiments. Biophysical Journal. 94: 1826-35. PMID 17921203 DOI: 10.1529/Biophysj.107.117689  0.55
2007 McKenna SA, Kim I, Puglisi EV, Lindhout DA, Aitken CE, Marshall RA, Puglisi JD. Purification and characterization of transcribed RNAs using gel filtration chromatography. Nature Protocols. 2: 3270-7. PMID 18079727 DOI: 10.1038/Nprot.2007.480  0.54
2007 McKenna SA, Lindhout DA, Shimoike T, Aitken CE, Puglisi JD. Viral dsRNA inhibitors prevent self-association and autophosphorylation of PKR. Journal of Molecular Biology. 372: 103-13. PMID 17619024 DOI: 10.1016/J.Jmb.2007.06.028  0.551
Low-probability matches (unlikely to be authored by this person)
2015 Llácer JL, Hussain T, Marler L, Aitken CE, Thakur A, Lorsch JR, Hinnebusch AG, Ramakrishnan V. Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex Molecular Cell. DOI: 10.1016/j.molcel.2015.06.033  0.275
2020 Aitken CE, Yoo K, Stanciu A, Luo J. Interrogating the role of eIF3 on the ribosome and across the transcriptome The Faseb Journal. 34: 1-1. DOI: 10.1096/fasebj.2020.34.s1.04005  0.24
2020 Yoo K, Aitken CE. Interrogating the Mechanism of Eukaryotic Initiation Factor 3 (eIF3) through Molecular Dissection The Faseb Journal. 34: 1-1. DOI: 10.1096/fasebj.2020.34.s1.04035  0.221
2022 Stanciu A, Luo J, Funes L, Galbokke Hewage S, Kulkarni SD, Aitken CE. Corrigendum: eIF3 and Its mRNA-Entry-Channel Arm Contribute to the Recruitment of mRNAs With Long 5'-Untranslated Regions. Frontiers in Molecular Biosciences. 9: 896119. PMID 35517854 DOI: 10.3389/fmolb.2022.896119  0.217
2008 Knee KM, Dixit SB, Aitken CE, Ponomarev S, Beveridge DL, Mukerji I. Spectroscopic and molecular dynamics evidence for a sequential mechanism for the A-to-B transition in DNA. Biophysical Journal. 95: 257-72. PMID 18326653 DOI: 10.1529/Biophysj.107.117606  0.147
2020 Aitken CE. Long-Lost Cousins? eIF3 Recognition of the HCV IRES and Cellular mRNAs. Journal of Molecular Biology. 432: 1856-1860. PMID 32171722 DOI: 10.1016/j.jmb.2020.03.006  0.129
2021 Taroni F, Garbolino P, Aitken C. A generalised Bayes' factor formula for evidence evaluation under activity level propositions: Variations around a fibres scenario. Forensic Science International. 322: 110750. PMID 33784544 DOI: 10.1016/j.forsciint.2021.110750  0.12
2003 Aitken C, Taroni F, Garbolino P. A graphical model for the evaluation of cross-transfer evidence in DNA profiles. Theoretical Population Biology. 63: 179-90. PMID 12689790 DOI: 10.1016/s0040-5809(03)00004-2  0.069
2010 Zadora G, Neocleous T, Aitken C. A two-level model for evidence evaluation in the presence of zeros. Journal of Forensic Sciences. 55: 371-84. PMID 20158591 DOI: 10.1111/J.1556-4029.2009.01316.X  0.056
2013 Ramos D, Gonzalez-Rodriguez J, Zadora G, Aitken C. Information-theoretical assessment of the performance of likelihood ratio computation methods. Journal of Forensic Sciences. 58: 1503-18. PMID 23879526 DOI: 10.1111/1556-4029.12233  0.055
2022 Aitken C, Taroni F, Bozza S. Evidence, probability and relative plausibility. The International Journal of Evidence & Proof. 26: 309-324. PMID 36110308 DOI: 10.1177/13657127221114508  0.054
2014 Wilson A, Aitken C, Sleeman R, Carter J. The evaluation of evidence relating to traces of cocaine on banknotes. Forensic Science International. 236: 67-76. PMID 24529776 DOI: 10.1016/j.forsciint.2013.11.011  0.05
2019 Aitken C, Chang YT, Buzzini P, Zadora G, Massonnet G. The evaluation of evidence for microspectrophotometry data using functional data analysis. Forensic Science International. 305: 110007. PMID 31756683 DOI: 10.1016/j.forsciint.2019.110007  0.044
2005 Taroni F, Bozza S, Aitken C. Decision analysis in forensic science. Journal of Forensic Sciences. 50: 894-905. PMID 16078494  0.034
2017 Aitken C, Nordgaard A. The Roles of Participants' Differing Background Information in the Evaluation of Evidence. Journal of Forensic Sciences. 63: 648-649. PMID 29194595 DOI: 10.1111/1556-4029.13712  0.027
1984 Ritchie JR, Aitken CE. Assessing the impacts of the 1988 Olympic Winter Games: the research program and initial results. Journal of Travel Research. 22: 17-25.  0.026
2017 Aitken C. Contribution by CGG Aitken to discussion of Meuwly et al. (2016). Forensic Science International. 276: 155. PMID 28413153 DOI: 10.1016/j.forsciint.2017.03.012  0.024
2020 Aitken C, Chang YT, Buzzini P, Zadora G, Massonnet G. Letter to the Editor in response to FSI 314 (2020) 110388. Forensic Science International. 316: 110478. PMID 32906062 DOI: 10.1016/j.forsciint.2020.110478  0.024
1985 Ritchie JRB, Aitken CE. Olympulse II - evolving resident attitudes toward the 1988 Olympic Winter Games ( Calgary). Journal of Travel Research. 23: 28-33.  0.022
2013 Aitken C, Gold E. Evidence evaluation for discrete data. Forensic Science International. 230: 147-55. PMID 23522524 DOI: 10.1016/j.forsciint.2013.02.042  0.016
2014 Biedermann A, Hicks T, Taroni F, Champod C, Aitken C. On the use of the likelihood ratio for forensic evaluation: response to Fenton et al. Science & Justice : Journal of the Forensic Science Society. 54: 316-8. PMID 25002051 DOI: 10.1016/j.scijus.2014.04.001  0.014
2018 Aitken C, Nordgaard A, Taroni F, Biedermann A. Commentary: Likelihood Ratio as Weight of Forensic Evidence: A Closer Look. Frontiers in Genetics. 9: 224. PMID 30013593 DOI: 10.3389/fgene.2018.00224  0.012
2019 Aitken C, Mavridis D. Reasoning under uncertainty. Evidence-Based Mental Health. 22: 44-48. PMID 30679196 DOI: 10.1136/ebmental-2018-300074  0.01
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