Jordan E. Burke, Ph.D. - Publications

Affiliations: 
2012 Biochemistry University of Wisconsin, Madison, Madison, WI 
Area:
Biochemistry

11/70 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Warden MS, Cai K, Cornilescu G, Burke JE, Ponniah K, Butcher SE, Pascal SM. Conformational Flexibility in the Enterovirus RNA Replication Platform. Rna (New York, N.Y.). PMID 30578285 DOI: 10.1261/Rna.069476.118  0.657
2018 Slosarek EL, Schuh AL, Pustova I, Johnson A, Bird J, Johnson M, Frankel EB, Bhattacharya N, Hanna MG, Burke JE, Ruhl DA, Quinney K, Block S, Peotter JL, Chapman ER, et al. Pathogenic TFG Mutations Underlying Hereditary Spastic Paraplegia Impair Secretory Protein Trafficking and Axon Fasciculation. Cell Reports. 24: 2248-2260. PMID 30157421 DOI: 10.1016/J.Celrep.2018.07.081  0.559
2015 Cornilescu G, Didychuk AL, Rodgers ML, Michael LA, Burke JE, Montemayor EJ, Hoskins AA, Butcher SE. Structural Analysis of Multi-Helical RNAs by NMR-SAXS/WAXS: Application to the U4/U6 di-snRNA. Journal of Molecular Biology. PMID 26655855 DOI: 10.1016/J.Jmb.2015.11.026  0.677
2015 Au HH, Cornilescu G, Mouzakis KD, Ren Q, Burke JE, Lee S, Butcher SE, Jan E. Global shape mimicry of tRNA within a viral internal ribosome entry site mediates translational reading frame selection. Proceedings of the National Academy of Sciences of the United States of America. PMID 26554019 DOI: 10.1073/Pnas.1512088112  0.665
2015 Manthei KA, Hill MC, Burke JE, Butcher SE, Keck JL. Structural mechanisms of DNA binding and unwinding in bacterial RecQ helicases. Proceedings of the National Academy of Sciences of the United States of America. 112: 4292-7. PMID 25831501 DOI: 10.1073/Pnas.1416746112  0.58
2015 Burke JE, Butcher SE, Brow DA. Spliceosome assembly in the absence of stable U4/U6 RNA pairing. Rna (New York, N.Y.). 21: 923-34. PMID 25762536 DOI: 10.1261/Rna.048421.114  0.747
2012 Burke JE, Butcher SE. Nucleic acid structure characterization by small angle X-ray scattering (SAXS). Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit7.18. PMID 23255205 DOI: 10.1002/0471142700.Nc0718S51  0.664
2012 Burke JE, Sashital DG, Zuo X, Wang YX, Butcher SE. Structure of the yeast U2/U6 snRNA complex. Rna (New York, N.Y.). 18: 673-83. PMID 22328579 DOI: 10.1261/Rna.031138.111  0.78
2012 Burke J, Sashital D, Zuo X, Wang Y, Butcher S. U2/U6 Helix I Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr17972  0.755
2012 Burke J, Sashital D, Zuo X, Wang Y, Butcher S. S. cerevisiae U2/U6 snRNA complex Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr17961  0.742
1990 Lauterbur PC, Burke JE. Richest u.s. Science prize. Science (New York, N.Y.). 249: 1375. PMID 17812160 DOI: 10.1126/science.249.4975.1375-a  0.339
Low-probability matches (unlikely to be authored by this person)
2018 Parsa JY, Boudoukha S, Burke J, Homer C, Madhani HD. Polymerase pausing induced by sequence-specific RNA-binding protein drives heterochromatin assembly. Genes & Development. 32: 953-964. PMID 29967291 DOI: 10.1101/gad.310136.117  0.275
2019 Burke JE, Longhurst AD, Natarajan P, Rao B, Liu J, Sales-Lee J, Mortensen Y, Moresco JJ, Diedrich JK, Yates JR, Madhani HD. A Non-Dicer RNase III and Four Other Novel Factors Required for RNAi-Mediated Transposon Suppression in the Human Pathogenic Yeast Cryptococcus neoformans. G3 (Bethesda, Md.). 9: 2235-2244. PMID 33877344 DOI: 10.1534/g3.119.400330  0.263
2014 Burke JE, Inglis AJ, Perisic O, Masson GR, McLaughlin SH, Rutaganira F, Shokat KM, Williams RL. Structures of PI4KIIIβ complexes show simultaneous recruitment of Rab11 and its effectors. Science (New York, N.Y.). 344: 1035-8. PMID 24876499 DOI: 10.1126/Science.1253397  0.249
2019 Burke JE, Longhurst AD, Natarajan P, Rao B, Liu J, Sales-Lee J, Mortensen Y, Moresco JJ, Diedrich JK, Yates JR, Madhani HD. A Non-Dicer RNase III and Four Other Novel Factors Required for RNAi-Mediated Transposon Suppression in the Human Pathogenic Yeast . G3 (Bethesda, Md.). PMID 31092606 DOI: 10.1534/G3.119.400330  0.247
2015 Rostislavleva K, Soler N, Ohashi Y, Zhang L, Pardon E, Burke JE, Masson GR, Johnson C, Steyaert J, Ktistakis NT, Williams RL. Structure and flexibility of the endosomal Vps34 complex reveals the basis of its function on membranes. Science (New York, N.Y.). 350: aac7365. PMID 26450213 DOI: 10.1126/Science.Aac7365  0.219
2018 Burke JE, Longhurst AD, Merkurjev D, Sales-Lee J, Rao B, Moresco JJ, Yates JR, Li JJ, Madhani HD. Spliceosome Profiling Visualizes Operations of a Dynamic RNP at Nucleotide Resolution. Cell. 173: 1014-1030.e17. PMID 29727661 DOI: 10.1016/J.Cell.2018.03.020  0.2
2016 Fowler ML, McPhail JA, Jenkins ML, Masson GR, Rutaganira FU, Shokat KM, Williams RL, Burke JE. Using hydrogen deuterium exchange mass spectrometry to engineer optimized constructs for crystallization of protein complexes: Case study of PI4KIIIβ with Rab11. Protein Science : a Publication of the Protein Society. 25: 826-39. PMID 26756197 DOI: 10.1002/Pro.2879  0.182
2016 Masson GR, Burke JE, Williams RL. Methods in the Study of PTEN Structure: X-Ray Crystallography and Hydrogen Deuterium Exchange Mass Spectrometry. Methods in Molecular Biology (Clifton, N.J.). 1388: 215-30. PMID 27033079 DOI: 10.1007/978-1-4939-3299-3_14  0.179
2013 Vadas O, Dbouk HA, Shymanets A, Perisic O, Burke JE, Abi Saab WF, Khalil BD, Harteneck C, Bresnick AR, Nürnberg B, Backer JM, Williams RL. Molecular determinants of PI3Kγ-mediated activation downstream of G-protein-coupled receptors (GPCRs). Proceedings of the National Academy of Sciences of the United States of America. 110: 18862-7. PMID 24190998 DOI: 10.1073/Pnas.1304801110  0.153
2013 Burke JE, Perisic O, Williams RL. Allosteric activation of PI3Kα by oncogenic mutations. Oncotarget. 4: 180-1. PMID 23563630 DOI: 10.18632/Oncotarget.913  0.15
2018 Kops AB, Burke JE, Guthrie C. Brr6 Plays a Role in Gene Recruitment and Transcriptional Regulation at the Nuclear envelope. Molecular Biology of the Cell. mbcE18040258. PMID 30133335 DOI: 10.1091/Mbc.E18-04-0258  0.143
2008 Hsu YH, Burke JE, Stephens DL, Deems RA, Li S, Asmus KM, Woods VL, Dennis EA. Calcium binding rigidifies the C2 domain and the intradomain interaction of GIVA phospholipase A2 as revealed by hydrogen/deuterium exchange mass spectrometry. The Journal of Biological Chemistry. 283: 9820-7. PMID 18211893 DOI: 10.1074/Jbc.M708143200  0.139
2015 Clarke JH, Giudici ML, Burke JE, Williams RL, Maloney DJ, Marugan J, Irvine RF. The function of phosphatidylinositol 5-phosphate 4-kinase γ (PI5P4Kγ) explored using a specific inhibitor that targets the PI5P-binding site. The Biochemical Journal. 466: 359-67. PMID 25495341 DOI: 10.1042/Bj20141333  0.137
2009 Hsu YH, Burke JE, Li S, Woods VL, Dennis EA. Localizing the membrane binding region of Group VIA Ca2+-independent phospholipase A2 using peptide amide hydrogen/deuterium exchange mass spectrometry. The Journal of Biological Chemistry. 284: 23652-61. PMID 19556238 DOI: 10.1074/Jbc.M109.021857  0.135
2012 Burke JE, Perisic O, Masson GR, Vadas O, Williams RL. Oncogenic mutations mimic and enhance dynamic events in the natural activation of phosphoinositide 3-kinase p110α (PIK3CA). Proceedings of the National Academy of Sciences of the United States of America. 109: 15259-64. PMID 22949682 DOI: 10.1073/Pnas.1205508109  0.132
2013 Walser R, Burke JE, Gogvadze E, Bohnacker T, Zhang X, Hess D, Küenzi P, Leitges M, Hirsch E, Williams RL, Laffargue M, Wymann MP. PKCβ phosphorylates PI3Kγ to activate it and release it from GPCR control. Plos Biology. 11: e1001587. PMID 23824069 DOI: 10.1371/Journal.Pbio.1001587  0.132
2008 Burke JE, Karbarz MJ, Deems RA, Li S, Woods VL, Dennis EA. Interaction of group IA phospholipase A2 with metal ions and phospholipid vesicles probed with deuterium exchange mass spectrometry. Biochemistry. 47: 6451-9. PMID 18500818 DOI: 10.1021/Bi8000962  0.131
2008 Burke JE, Hsu YH, Deems RA, Li S, Woods VL, Dennis EA. A phospholipid substrate molecule residing in the membrane surface mediates opening of the lid region in group IVA cytosolic phospholipase A2. The Journal of Biological Chemistry. 283: 31227-36. PMID 18753135 DOI: 10.1074/Jbc.M804492200  0.13
1968 Burke JE, Kays TH, Kulp JL, Twersky V. Scattering by two-component random distributions of spheres. Applied Optics. 7: 2392-400. PMID 20069011 DOI: 10.1364/AO.7.002392  0.129
2009 Burke JE, Babakhani A, Gorfe AA, Kokotos G, Li S, Woods VL, McCammon JA, Dennis EA. Location of inhibitors bound to group IVA phospholipase A2 determined by molecular dynamics and deuterium exchange mass spectrometry. Journal of the American Chemical Society. 131: 8083-91. PMID 19459633 DOI: 10.1021/Ja900098Y  0.124
2012 Dbouk HA, Vadas O, Shymanets A, Burke JE, Salamon RS, Khalil BD, Barrett MO, Waldo GL, Surve C, Hsueh C, Perisic O, Harteneck C, Shepherd PR, Harden TK, Smrcka AV, et al. G protein-coupled receptor-mediated activation of p110β by Gβγ is required for cellular transformation and invasiveness. Science Signaling. 5: ra89. PMID 23211529 DOI: 10.1126/Scisignal.2003264  0.117
2016 Rutaganira FU, Fowler ML, McPhail JA, Gelman MA, Nguyen K, Xiong A, Dornan GL, Tavshanjian B, Glenn JS, Shokat KM, Burke JE. Design and Structural Characterization of Potent and Selective Inhibitors of Phosphatidylinositol 4 Kinase IIIβ. Journal of Medicinal Chemistry. 59: 1830-9. PMID 26885694 DOI: 10.1021/Acs.Jmedchem.5B01311  0.114
2015 Masson GR, Perisic O, Burke JE, Williams RL. The intrinsically disordered tails of PTEN and PTEN-L have distinct roles in regulating substrate specificity and membrane activity. The Biochemical Journal. PMID 26527737 DOI: 10.1042/Bj20150931  0.113
2011 Vadas O, Burke JE, Zhang X, Berndt A, Williams RL. Structural basis for activation and inhibition of class I phosphoinositide 3-kinases. Science Signaling. 4: re2. PMID 22009150 DOI: 10.1126/Scisignal.2002165  0.109
2011 Burke JE, Vadas O, Berndt A, Finegan T, Perisic O, Williams RL. Dynamics of the phosphoinositide 3-kinase p110δ interaction with p85α and membranes reveals aspects of regulation distinct from p110α. Structure (London, England : 1993). 19: 1127-37. PMID 21827948 DOI: 10.1016/J.Str.2011.06.003  0.106
1947 BURKE JE, SMITH CS. The formation of uranium hydride. Journal of the American Chemical Society. 69: 2500-2. PMID 20268307  0.103
2013 Cao J, Burke JE, Dennis EA. Using hydrogen/deuterium exchange mass spectrometry to define the specific interactions of the phospholipase A2 superfamily with lipid substrates, inhibitors, and membranes. The Journal of Biological Chemistry. 288: 1806-13. PMID 23209293 DOI: 10.1074/Jbc.R112.421909  0.096
2013 Burke JE, Williams RL. Dynamic steps in receptor tyrosine kinase mediated activation of class IA phosphoinositide 3-kinases (PI3K) captured by H/D exchange (HDX-MS). Advances in Biological Regulation. 53: 97-110. PMID 23194976 DOI: 10.1016/J.Jbior.2012.09.005  0.092
2009 Burke JE, Dennis EA. Phospholipase A2 biochemistry. Cardiovascular Drugs and Therapy / Sponsored by the International Society of Cardiovascular Pharmacotherapy. 23: 49-59. PMID 18931897 DOI: 10.1007/S10557-008-6132-9  0.078
2016 Dornan GL, McPhail JA, Burke JE. Type III phosphatidylinositol 4 kinases: structure, function, regulation, signalling and involvement in disease. Biochemical Society Transactions. 44: 260-6. PMID 26862213 DOI: 10.1042/BST20150219  0.074
1982 Burke JE, Roath S, Ackery D, Wyeth P. The comparison of 8-hydroxyquinoline, tropolone, and acetylacetone as mediators in the labelling of polymorphonuclear leucocytes with indium-111: a functional study. European Journal of Nuclear Medicine. 7: 73-6. PMID 6806102  0.074
1986 Snyder JR, Burke JE. Systems analysis of schools of allied health using Leavitt's Organizational Model: a meta-analysis. Journal of Allied Health. 15: 153-61. PMID 3721995  0.072
2019 Brimacombe CA, Burke JE, Parsa JY, Catania S, O'Meara TR, Witchley JN, Burrack LS, Madhani HD, Noble SM. A natural histone H2A variant lacking the Bub1 phosphorylation site and regulated depletion of centromeric histone CENP-A foster evolvability in Candida albicans. Plos Biology. 17: e3000331. PMID 31226107 DOI: 10.1371/Journal.Pbio.3000331  0.072
2009 Prévost N, Mitsios JV, Kato H, Burke JE, Dennis EA, Shimizu T, Shattil SJ. Group IVA cytosolic phospholipase A2 (cPLA2alpha) and integrin alphaIIbbeta3 reinforce each other's functions during alphaIIbbeta3 signaling in platelets. Blood. 113: 447-57. PMID 18840708 DOI: 10.1182/Blood-2008-06-162032  0.071
2010 Kokotos G, Hsu YH, Burke JE, Baskakis C, Kokotos CG, Magrioti V, Dennis EA. Potent and selective fluoroketone inhibitors of group VIA calcium-independent phospholipase A2. Journal of Medicinal Chemistry. 53: 3602-10. PMID 20369880 DOI: 10.1021/Jm901872V  0.066
2016 Ziemba BP, Burke JE, Masson G, Williams RL, Falke JJ. Regulation of PI3K by PKC and MARCKS: Single-Molecule Analysis of a Reconstituted Signaling Pathway. Biophysical Journal. 110: 1811-25. PMID 27119641 DOI: 10.1016/J.Bpj.2016.03.001  0.066
2020 Catania S, Dumesic PA, Pimentel H, Nasif A, Stoddard CI, Burke JE, Diedrich JK, Cook S, Shea T, Geinger E, Lintner R, Yates JR, Hajkova P, Narlikar GJ, Cuomo CA, et al. Evolutionary Persistence of DNA Methylation for Millions of Years after Ancient Loss of a De Novo Methyltransferase. Cell. PMID 31955845 DOI: 10.1016/J.Cell.2019.12.012  0.062
1946 BURKE JE. The physician's job in the school health program. The Journal of School Health. 16: 287-9. PMID 20288721  0.058
2009 Burke JE, Dennis EA. Phospholipase A2 structure/function, mechanism, and signaling. Journal of Lipid Research. 50: S237-42. PMID 19011112 DOI: 10.1194/Jlr.R800033-Jlr200  0.055
2015 Burke JE, Williams RL. Synergy in activating class I PI3Ks. Trends in Biochemical Sciences. 40: 88-100. PMID 25573003 DOI: 10.1016/J.Tibs.2014.12.003  0.055
2013 D'Angelo G, Uemura T, Chuang CC, Polishchuk E, Santoro M, Ohvo-Rekilä H, Sato T, Di Tullio G, Varriale A, D'Auria S, Daniele T, Capuani F, Johannes L, Mattjus P, Monti M, ... ... Burke JE, et al. Vesicular and non-vesicular transport feed distinct glycosylation pathways in the Golgi. Nature. 501: 116-20. PMID 23913272 DOI: 10.1038/Nature12423  0.052
2015 Vadas O, Burke JE. Probing the dynamic regulation of peripheral membrane proteins using hydrogen deuterium exchange-MS (HDX-MS). Biochemical Society Transactions. 43: 773-86. PMID 26517882 DOI: 10.1042/BST20150065  0.049
2020 Catania S, Dumesic PA, Pimentel H, Nasif A, Stoddard CI, Burke JE, Diedrich JK, Cooke S, Shea T, Gienger E, Lintner R, Yates JR, Hajkova P, Narlikar GJ, Cuomo CA, et al. Evolutionary Persistence of DNA Methylation for Millions of Years after Ancient Loss of a De Novo Methyltransferase. Cell. 180: 816. PMID 32084344 DOI: 10.1016/j.cell.2020.02.006  0.048
2012 Close J, Heidebrecht R, Hendrix J, Li C, Munoz B, Surdi L, Kattar S, Tempest P, Moses P, Geng X, Hughes B, Smotrov N, Moxham C, Chapnick J, Kariv I, ... ... Burke JE, et al. Lead optimization of 4,4-biaryl piperidine amides as γ-secretase inhibitors. Bioorganic & Medicinal Chemistry Letters. 22: 3203-7. PMID 22483609 DOI: 10.1016/J.Bmcl.2012.03.038  0.037
1946 BURKE JE. The future of the school health program; the school physician's responsibility. The Journal of School Health. 16: 219. PMID 20288714  0.037
1990 Burke JE. Dental research. What priority in the academic environment? Dental Clinics of North America. 34: 155-7. PMID 2295356  0.03
1988 Love LD, Burke JE. Preliminary evaluation of the apical seal of root canals filled with a Teflon-base material. Endodontics & Dental Traumatology. 4: 278-81. PMID 3271681  0.028
1994 Burke JE, Lanzi GL. Early management of civilian gunshot wounds to the face. The Journal of Trauma. 37: 514. PMID 8083923  0.027
1999 Schulman KA, Berlin JA, Harless W, Kerner JF, Sistrunk S, Gersh BJ, Dubé R, Taleghani CK, Burke JE, Williams S, Eisenberg JM, Escarce JJ. The effect of race and sex on physicians' recommendations for cardiac catheterization. The New England Journal of Medicine. 340: 618-26. PMID 10029647 DOI: 10.1056/Nejm199902253400806  0.021
1978 Gerathewohl SJ, Brown EL, Burke JE, Kimball KA, Lowe WF, Stackhouse SP. Inflight measurement of pilot workload: a panel discussion. Aviation, Space, and Environmental Medicine. 49: 810-22. PMID 656009  0.018
2013 Burke JE, Williams RL. Connecting with an old partner in a new way. Cancer Cell. 23: 559-61. PMID 23680139 DOI: 10.1016/J.Ccr.2013.04.023  0.017
1987 Covey PC, Burke JE. Research and the mission of schools of allied health. Journal of Allied Health. 16: 1-5. PMID 3558099  0.016
2003 Evenson KR, Eyler AA, Wilcox S, Thompson JL, Burke JE. Test-retest reliability of a questionnaire on physical activity and its correlates among women from diverse racial and ethnic groups. American Journal of Preventive Medicine. 25: 15-22. PMID 14499805 DOI: 10.1016/S0749-3797(03)00160-0  0.013
2004 Bahram R, Burke JE, Lanzi GL. Head and neck injury from a leopard attack: case report and review of the literature. Journal of Oral and Maxillofacial Surgery : Official Journal of the American Association of Oral and Maxillofacial Surgeons. 62: 247-9. PMID 14762761  0.01
1997 Carson K, Burke JE, Nick S. Changing roles in case management: some reflections. Continuum (Society For Social Work Administrators in Health Care). 17: 1, 3-9. PMID 10173860  0.01
1996 Munk SA, Lai RK, Burke JE, Arasasingham PN, Kharlamb AB, Manlapaz CA, Padillo EU, Wijono MK, Hasson DW, Wheeler LA, Garst ME. Synthesis and pharmacologic evaluation of 2-endo-amino-3-exo-isopropylbicyclo[2.2.1]heptane: a potent imidazoline1 receptor specific agent. Journal of Medicinal Chemistry. 39: 1193-5. PMID 8632424 DOI: 10.1021/jm960012o  0.01
1992 Lanzi GL, Burke JE. Surgical repair of a craniofacial trauma patient: a case report. Journal of the New Jersey Dental Association. 63: 21-4. PMID 1625003  0.01
1988 Haber-Cohen A, Burke JE. Systemic lupus erythematosus circulating anticoagulant: report of a case. Journal of Oral and Maxillofacial Surgery : Official Journal of the American Association of Oral and Maxillofacial Surgeons. 46: 688-9. PMID 3135371  0.01
1968 Burke JE. Ceramics today. Science (New York, N.Y.). 161: 1205-12. PMID 17744644 DOI: 10.1126/science.161.3847.1205  0.01
Hide low-probability matches.