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Daniel Jay Klionsky - Publications

2000 Microbiology University of California, Davis, Davis, CA 
 2000- Molecular, Cellular, and Developmental Biology University of Michigan, Ann Arbor, Ann Arbor, MI 
Cell Biology, Microbiology Biology

500 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Hawkins WD, Klionsky DJ. The expanding role of Atg8. Autophagy. 1-2. PMID 34482799 DOI: 10.1080/15548627.2021.1967566  1
2021 Ariosa AR, Lahiri V, Lei Y, Yang Y, Yin Z, Zhang Z, Klionsky DJ. A Perspective on the Role of Autophagy in Cancer. Biochimica Et Biophysica Acta. Molecular Basis of Disease. 166262. PMID 34481059 DOI: 10.1016/j.bbadis.2021.166262  1
2021 Yu B, Yu L, Klionsky DJ. Nutrition acquisition by human immunity, transient overnutrition and the cytokine storm in severe cases of COVID-19. Medical Hypotheses. 155: 110668. PMID 34467856 DOI: 10.1016/j.mehy.2021.110668  0.76
2021 Klionsky DJ, Petroni G, Amaravadi RK, Baehrecke EH, Ballabio A, Boya P, Bravo-San Pedro JM, Cadwell K, Cecconi F, Choi AMK, Choi ME, Chu CT, Codogno P, Colombo MI, Cuervo AM, et al. Autophagy in major human diseases. The Embo Journal. e108863. PMID 34459017 DOI: 10.15252/embj.2021108863  1
2021 Yang Y, Klionsky DJ. An AMPK-ULK1-PIKFYVE signaling axis for PtdIns5P-dependent autophagy regulation upon glucose starvation. Autophagy. 1-2. PMID 34369843 DOI: 10.1080/15548627.2021.1959240  1
2021 Popelka H, Klionsky DJ. Multiple structural rearrangements mediated by high-plasticity regions in Atg3 are key for efficient conjugation of Atg8 to PE during autophagy. Autophagy. 17: 1805-1808. PMID 34338142 DOI: 10.1080/15548627.2021.1954457  1
2021 Deretic V, Klionsky DJ. Not lowering the bar, just providing a step stool. Autophagy. 1-2. PMID 34152930 DOI: 10.1080/15548627.2021.1936360  1
2021 Huang YJ, Klionsky DJ. Yeast mitophagy: Unanswered questions. Biochimica Et Biophysica Acta. General Subjects. 129932. PMID 34022298 DOI: 10.1016/j.bbagen.2021.129932  1
2021 Lahiri V, Klionsky DJ. ATG4-family proteins drive phagophore growth independently of the LC3/GABARAP lipidation system. Autophagy. 17: 1293-1295. PMID 34011239 DOI: 10.1080/15548627.2021.1917284  1
2021 Ajoolabady A, Aslkhodapasandhokmabad H, Libby P, Tuomilehto J, Lip GYH, Penninger JM, Richardson DR, Tang D, Zhou H, Wang S, Klionsky DJ, Kroemer G, Ren J. Ferritinophagy and ferroptosis in the management of metabolic diseases. Trends in Endocrinology and Metabolism: Tem. PMID 34006412 DOI: 10.1016/j.tem.2021.04.010  1
2021 Gatica D, Chiong M, Lavandero S, Klionsky DJ. The role of autophagy in cardiovascular pathology. Cardiovascular Research. PMID 33956077 DOI: 10.1093/cvr/cvab158  1
2021 Wen X, Yang Y, Klionsky DJ. Moments in autophagy and disease: Past and present. Molecular Aspects of Medicine. 100966. PMID 33931245 DOI: 10.1016/j.mam.2021.100966  1
2021 Ajoolabady A, Wang S, Kroemer G, Penninger JM, Uversky VN, Pratico D, Henninger N, Reiter RJ, Bruno A, Joshipura K, Aslkhodapasandhokmabad H, Klionsky DJ, Ren J. Targeting autophagy in ischemic stroke: From molecular mechanisms to clinical therapeutics. Pharmacology & Therapeutics. 107848. PMID 33823204 DOI: 10.1016/j.pharmthera.2021.107848  1
2021 Metur SP, Klionsky DJ. Adaptive immunity at the crossroads of autophagy and metabolism. Cellular & Molecular Immunology. PMID 33785844 DOI: 10.1038/s41423-021-00662-3  1
2021 Ajoolabady A, Wang S, Kroemer G, Klionsky DJ, Uversky VN, Sowers JR, Aslkhodapasandhokmabad H, Bi Y, Ge J, Ren J. ER stress in Cardiometabolic Diseases: from Molecular Mechanisms to Therapeutics. Endocrine Reviews. PMID 33693711 DOI: 10.1210/endrev/bnab006  1
2021 Zhang R, Kang R, Klionsky DJ, Tang D. Ion Channels and Transporters in Autophagy. Autophagy. 1-20. PMID 33657975 DOI: 10.1080/15548627.2021.1885147  1
2021 Klionsky DJ, Abdel-Aziz AK, Abdelfatah S, Abdellatif M, Abdoli A, Abel S, Abeliovich H, Abildgaard MH, Abudu YP, Acevedo-Arozena A, Adamopoulos IE, Adeli K, Adolph TE, Adornetto A, Aflaki E, et al. Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition). Autophagy. 1-382. PMID 33634751 DOI: 10.1080/15548627.2020.1797280  1
2021 Popelka H, Reinhart EF, Padma Metur S, Leary KA, Ragusa MJ, Klionsky DJ. Membrane binding and homodimerization of Atg16 via two distinct protein regions is essential for autophagy in yeast. Journal of Molecular Biology. 166809. PMID 33484718 DOI: 10.1016/j.jmb.2021.166809  1
2021 Feng Y, Ariosa AR, Yang Y, Hu Z, Dengjel J, Klionsky DJ. Downregulation of autophagy by Met30-mediated Atg9 ubiquitination. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33443148 DOI: 10.1073/pnas.2005539118  1
2021 Huang YJ, Klionsky DJ. Did evolution choose Atg11 as the scaffolding platform beyond selective autophagy? Autophagy. 1-2. PMID 33404291 DOI: 10.1080/15548627.2021.1872176  1
2021 Li J, Liu J, Xu Y, Wu R, Chen X, Song X, Zeh H, Kang R, Klionsky DJ, Wang X, Tang D. Tumor Heterogeneity in Autophagy-Dependent Ferroptosis. Autophagy. PMID 33404288 DOI: 10.1080/15548627.2021.1872241  1
2020 Santos MMS, Gatica D, de Azêvedo Silva J, Crovella S, Klionsky DJ, de Morais MA. Incomplete mitophagy in the mevalonate kinase-deficient Saccharomyces cerevisiae and its relation to the MKD-related autoinflammatory disease in humans. Biochimica Et Biophysica Acta. Molecular Basis of Disease. 166053. PMID 33385519 DOI: 10.1016/j.bbadis.2020.166053  1
2020 Domdom MA, Brest P, Grosjean I, Roméo B, Landi MT, Gal J, Klionsky DJ, Hofman P, Mograbi B. A multifactorial score including autophagy for prognosis and care of COVID-19 patients. Autophagy. 16: 2276-2281. PMID 33249989 DOI: 10.1080/15548627.2020.1844433  1
2020 Steinfeld N, Lahiri V, Morrison A, Metur SP, Klionsky DJ, Weisman LS. Elevating PI3P drives select downstream membrane trafficking pathways. Molecular Biology of the Cell. mbcE20030191. PMID 33237833 DOI: 10.1091/mbc.E20-03-0191  1
2020 Li J, Chen X, Kang R, Zeh H, Klionsky DJ, Tang D. Regulation and Function of Autophagy in Pancreatic Cancer. Autophagy. PMID 33161807 DOI: 10.1080/15548627.2020.1847462  1
2020 Delorme-Axford E, Klionsky DJ. Highlights in the fight against COVID-19: does autophagy play a role in SARS-CoV-2 infection? Autophagy. 1-5. PMID 33153403 DOI: 10.1080/15548627.2020.1844940  1
2020 Yang Y, Klionsky DJ. A novel reticulophagy receptor, Epr1: a bridge between the phagophore protein Atg8 and ER transmembrane VAP proteins. Autophagy. 1-2. PMID 33121335 DOI: 10.1080/15548627.2020.1837457  1
2020 Zou B, Liu J, Klionsky DJ, Tang D, Kang R. Extracellular SQSTM1 as an inflammatory mediator. Autophagy. PMID 33111608 DOI: 10.1080/15548627.2020.1843253  1
2020 Metur SP, Klionsky DJ. Autophagy under construction: insights from reconstitution of autophagosome nucleation. Autophagy. 1-2. PMID 33092448 DOI: 10.1080/15548627.2020.1835231  1
2020 Zhou B, Liu J, Zeng L, Zhu S, Wang H, Billiar TR, Kroemer G, Klionsky DJ, Zeh HJ, Jiang J, Tang D, Kang R. Extracellular SQSTM1 mediates bacterial septic death in mice through insulin receptor signalling. Nature Microbiology. PMID 33077977 DOI: 10.1038/s41564-020-00795-7  1
2020 Yin Z, Popelka H, Lei Y, Yang Y, Klionsky DJ. The Roles of Ubiquitin in Mediating Autophagy. Cells. 9. PMID 32887506 DOI: 10.3390/Cells9092025  1
2020 Hawkins WD, Klionsky DJ. Structure of human ATG9A: how holey art thou? Autophagy. 1-3. PMID 32840139 DOI: 10.1080/15548627.2020.1810901  1
2020 Chen X, Li J, Kang R, Klionsky DJ, Tang D. Ferroptosis: Machinery and Regulation. Autophagy. PMID 32804006 DOI: 10.1080/15548627.2020.1810918  1
2020 Tang D, Li J, Zhang R, Kang R, Klionsky DJ. Chloroquine in fighting COVID-19: good, bad, or both? Autophagy. 1-3. PMID 32713288 DOI: 10.1080/15548627.2020.1796014  1
2020 Yin Z, Klionsky DJ. NPC-phagy: selective autophagy of the nuclear pore complexes. Autophagy. 1-2. PMID 32713250 DOI: 10.1080/15548627.2020.1798199  1
2020 Bello-Perez M, Sola I, Novoa B, Klionsky DJ, Falco A. Canonical and Noncanonical Autophagy as Potential Targets for COVID-19. Cells. 9. PMID 32635598 DOI: 10.3390/Cells9071619  0.04
2020 Mijaljica D, Klionsky DJ. Autophagy/virophagy: a "disposal strategy" to combat COVID-19. Autophagy. 1-2. PMID 32578486 DOI: 10.1080/15548627.2020.1782022  0.01
2020 Shojaei S, Suresh M, Klionsky DJ, Labouta HI, Ghavami S. Autophagy and SARS-CoV-2 infection: Apossible smart targeting of the autophagy pathway. Virulence. 11: 805-810. PMID 32567972 DOI: 10.1080/21505594.2020.1780088  0.01
2020 Wen X, Klionsky DJ. Phosphorylation of ULK1 serine 746 dictates ATG5-independent autophagy. Autophagy. 1-2. PMID 32544365 DOI: 10.1080/15548627.2020.1780844  1
2020 Lei Y, Klionsky DJ. Scission, a critical step in autophagosome formation. Autophagy. 1-3. PMID 32544363 DOI: 10.1080/15548627.2020.1779468  1
2020 Bonam SR, Muller S, Bayry J, Klionsky DJ. Autophagy as an emerging target for COVID-19: lessons from an old friend, chloroquine. Autophagy. PMID 32522067 DOI: 10.1080/15548627.2020.1779467  0.04
2020 Brest P, Benzaquen J, Klionsky DJ, Hofman P, Mograbi B. Open questions for harnessing autophagy-modulating drugs in the SARS-CoV-2 war: Hope or Hype? Autophagy. PMID 32521191 DOI: 10.1080/15548627.2020.1779531  1
2020 Gatica D, Wen X, Cheong H, Klionsky DJ. Vac8 determines phagophore assembly site vacuolar localization during nitrogen starvation-induced autophagy. Autophagy. PMID 32508216 DOI: 10.1080/15548627.2020.1776474  1
2020 Delorme-Axford E, Klionsky DJ. The LC3-conjugation machinery specifies cargo loading and secretion of extracellular vesicles. Autophagy. 1-3. PMID 32401566 DOI: 10.1080/15548627.2020.1760057  1
2020 Gatica D, Klionsky DJ. New tricks of an old autophagy regulator: AMPK-dependent regulation of autophagy through CCNY (cyclin Y)-CDK16. Autophagy. 16: 973-974. PMID 32401167 DOI: 10.1080/15548627.2020.1756665  1
2020 Shang D, Wang L, Klionsky DJ, Cheng H, Zhou R. Sex differences in autophagy-mediated diseases: toward precision medicine. Autophagy. PMID 32264724 DOI: 10.1080/15548627.2020.1752511  1
2020 Hawkins WD, Klionsky DJ. A separation that's for the best: coming together at the PAS. Cell Research. PMID 32203129 DOI: 10.1038/S41422-020-0297-6  1
2020 Li C, Zhang Y, Liu J, Kang R, Klionsky DJ, Tang D. Mitochondrial DNA stress triggers autophagy-dependent ferroptotic death. Autophagy. 1-13. PMID 32186434 DOI: 10.1080/15548627.2020.1739447  1
2020 Liu J, Kuang F, Kroemer G, Klionsky DJ, Kang R, Tang D. Autophagy-Dependent Ferroptosis: Machinery and Regulation. Cell Chemical Biology. PMID 32160513 DOI: 10.1016/J.Chembiol.2020.02.005  1
2020 Metur SP, Klionsky DJ. As (and when) you like it: on-demand phospholipid synthesis drives phagophore expansion during autophagy. Autophagy. 1-3. PMID 32097081 DOI: 10.1080/15548627.2020.1732713  1
2020 Shu WJ, Zhao MJ, Klionsky DJ, Du HN. Old factors, new players: transcriptional regulation of autophagy. Autophagy. 1-3. PMID 32054419 DOI: 10.1080/15548627.2020.1728611  1
2020 Yang X, Zhang W, Wen X, Bulinski PJ, Chomchai DA, Arines FM, Liu YY, Sprenger S, Teis D, Klionsky DJ, Li M. TORC1 regulates vacuole membrane composition through ubiquitin- and ESCRT-dependent microautophagy. The Journal of Cell Biology. 219. PMID 32045480 DOI: 10.1083/Jcb.201902127  1
2020 Klionsky DJ. Autophagy participates in, well, just about everything. Cell Death and Differentiation. 27: 831-832. PMID 32034315 DOI: 10.1038/S41418-020-0511-6  0.01
2020 Popelka H, Klionsky DJ. Molecular dynamics simulations reveal how the reticulon-homology domain of the autophagy receptor RETREG1/FAM134B remodels membranes for efficient selective reticulophagy. Autophagy. 1-4. PMID 31996076 DOI: 10.1080/15548627.2020.1719725  1
2020 Dai E, Han L, Liu J, Xie Y, Kroemer G, Klionsky DJ, Zeh HJ, Kang R, Wang J, Tang D. Autophagy-Dependent Ferroptosis Drives Tumor-Associated Macrophage Polarization via Release and Uptake of Oncogenic KRAS Protein. Autophagy. PMID 31920150 DOI: 10.1080/15548627.2020.1714209  1
2020 Yang Y, Klionsky DJ. Autophagy and disease: unanswered questions. Cell Death and Differentiation. PMID 31900427 DOI: 10.1038/S41418-019-0480-9  1
2019 Metur SP, Klionsky DJ. The curious case of polyamines: spermidine drives reversal of B cell senescence. Autophagy. 1-2. PMID 31795807 DOI: 10.1080/15548627.2019.1698210  1
2019 Wen X, Klionsky DJ. At a Glance: A History of Autophagy and Cancer. Seminars in Cancer Biology. PMID 31707087 DOI: 10.1016/J.Semcancer.2019.11.005  1
2019 Qiu Y, Zheng Y, Grace CRR, Liu X, Klionsky DJ, Schulman BA. Allosteric regulation through a switch element in the autophagy E2, Atg3. Autophagy. PMID 31690182 DOI: 10.1080/15548627.2019.1688550  1
2019 Loos B, Klionsky DJ, du Toit A, Hofmeyr JS. ON THE RELEVANCE OF PRECISION AUTOPHAGY FLUX CONTROL - POINTS OF DEPARTURE FOR CLINICAL TRANSLATION. Autophagy. PMID 31679454 DOI: 10.1080/15548627.2019.1687211  1
2019 Yin Z, Liu X, Ariosa A, Huang H, Jin M, Karbstein K, Klionsky DJ. Psp2, a novel regulator of autophagy that promotes autophagy-related protein translation. Cell Research. PMID 31666677 DOI: 10.1038/S41422-019-0246-4  1
2019 Wen X, Klionsky DJ. How bacteria can block xenophagy: an insight from . Autophagy. 1-2. PMID 31530078 DOI: 10.1080/15548627.2019.1666580  1
2019 Zheng L, Shu WJ, Li YM, Mari M, Yan C, Wang D, Yin ZH, Jiang W, Zhou Y, Okamoto K, Reggiori F, Klionsky DJ, Song Z, Du HN. The Paf1 complex transcriptionally regulates the mitochondrial-anchored protein Atg32 leading to activation of mitophagy. Autophagy. PMID 31525119 DOI: 10.1080/15548627.2019.1668228  1
2019 Yang Y, Klionsky DJ. A novel role of UBQLNs (ubiquilins) in regulating autophagy, MTOR signaling and v-ATPase function. Autophagy. 1-2. PMID 31516068 DOI: 10.1080/15548627.2019.1665293  1
2019 Wen X, Gatica D, Yin Z, Hu Z, Dengjel J, Klionsky DJ. The Spt4 component of the Spt4-Spt5 transcription factor complex negatively regulates the expression of . Autophagy. PMID 31462158 DOI: 10.1080/15548627.2019.1659573  1
2019 Liu J, Yang M, Kang R, Klionsky DJ, Tang D. Autophagic Degradation of the Circadian Clock Regulator Promotes Ferroptosis. Autophagy. PMID 31441366 DOI: 10.1080/15548627.2019.1659623  1
2019 Zheng Y, Qiu Y, Grace CRR, Liu X, Klionsky DJ, Schulman BA. A switch element in the autophagy E2 Atg3 mediates allosteric regulation across the lipidation cascade. Nature Communications. 10: 3600. PMID 31399562 DOI: 10.1038/S41467-019-11435-Y  1
2019 Delorme-Axford E, Popelka H, Klionsky DJ. TEX264 is a major receptor for mammalian reticulophagy. Autophagy. 1-5. PMID 31362563 DOI: 10.1080/15548627.2019.1646540  1
2019 Yang M, Chen P, Liu J, Zhu S, Kroemer G, Klionsky DJ, Lotze MT, Zeh HJ, Kang R, Tang D. Clockophagy is a novel selective autophagy process favoring ferroptosis. Science Advances. 5: eaaw2238. PMID 31355331 DOI: 10.1126/Sciadv.Aaw2238  1
2019 Gatica D, Damasio A, Pascual C, Klionsky DJ, Ragusa MJ, Popelka H. The carboxy terminus of yeast Atg13 binds phospholipid membrane via motifs that overlap with the Vac8-interacting domain. Autophagy. 1-14. PMID 31352862 DOI: 10.1080/15548627.2019.1648117  1
2019 Xu X, Shang D, Cheng H, Klionsky DJ, Zhou R. Gene essentiality of : dosage effect and autophagy regulation in retinal photoreceptors. Autophagy. PMID 31345090 DOI: 10.1080/15548627.2019.1647023  1
2019 Hartley S, Klionsky DJ. Found art: the yeast vacuole. Autophagy. 1-7. PMID 31305202 DOI: 10.1080/15548627.2019.1638208  0.01
2019 Klionsky DJ. The "found-art vacuole"-people learn in different ways. Autophagy. 1-2. PMID 31238790 DOI: 10.1080/15548627.2019.1630225  0.01
2019 Deretic V, Prossnitz E, Burge M, Campen MJ, Cannon J, Liu KJ, Hall P, Sklar LA, Allers L, Mariscal L, Garcia SA, Baehrecke EH, Behrends C, Cecconi F, Codogno P, ... ... Klionsky DJ, et al. Autophagy, Inflammation, and Metabolism (AIM) Center in its second year. Autophagy. PMID 31234750 DOI: 10.1080/15548627.2019.1634444  1
2019 Klionsky DJ. 2020 Is not that far away, which means it is time for the new guidelines. Autophagy. 15: 1129. PMID 31149865 DOI: 10.1080/15548627.2019.1624415  0.01
2019 Liu X, Jin M, Yao Z, Bernard A, Klionsky DJ. Bidirectional roles of Dhh1 in regulating autophagy. Autophagy. PMID 31116636 DOI: 10.1080/15548627.2019.1621632  1
2019 Lei Y, Klionsky DJ. UIM-UDS: a new interface between ATG8 and its interactors. Cell Research. PMID 31110250 DOI: 10.1038/S41422-019-0179-Y  1
2019 Liu X, Yao Z, Jin M, Namkoong S, Yin Z, Lee JH, Klionsky DJ. Dhh1 promotes autophagy-related protein translation during nitrogen starvation. Plos Biology. 17: e3000219. PMID 30973873 DOI: 10.1371/Journal.Pbio.3000219  1
2019 Lahiri V, Hawkins WD, Klionsky DJ. Watch What You (Self-) Eat: Autophagic Mechanisms that Modulate Metabolism. Cell Metabolism. 29: 803-826. PMID 30943392 DOI: 10.1016/J.Cmet.2019.03.003  1
2019 Gatica D, Hu G, Zhang N, Williamson PR, Klionsky DJ. The Pat1-Lsm complex prevents 3' to 5' degradation of a specific subset of ATG mRNAs during nitrogen starvation-induced autophagy. Autophagy. 1-2. PMID 30885034 DOI: 10.1080/15548627.2019.1587262  1
2019 Zhou B, Liu J, Kang R, Klionsky DJ, Kroemer G, Tang D. Ferroptosis Is a Type of Autophagy-Dependent Cell Death. Seminars in Cancer Biology. PMID 30880243 DOI: 10.1016/J.Semcancer.2019.03.002  1
2019 Gatica D, Klionsky DJ. Towards understanding mRNA-binding protein specificity: lessons from post-transcriptional regulation of ATG mRNA during nitrogen starvation-induced autophagy. Current Genetics. PMID 30783742 DOI: 10.1007/S00294-019-00943-5  1
2019 Zhou XJ, Klionsky DJ, Zhang H. Podocytes and autophagy: A potential therapeutic target in lupus nephritis. Autophagy. PMID 30755075 DOI: 10.1080/15548627.2019.1580512  0.48
2019 Wang F, Gatica D, Ying ZX, Peterson LF, Kim PK, Bernard D, Saiya-Cork K, Wang S, Kaminski MS, Chang AE, Phillips T, Klionsky DJ, Malek SN. Follicular lymphoma-associated mutations in vacuolar ATPase ATP6V1B2 activate autophagic flux and MTOR. The Journal of Clinical Investigation. PMID 30720463 DOI: 10.1172/Jci98288  1
2019 Lahiri V, Klionsky DJ. Spatially distinct pools of TORC1 balance protein homeostasis. Autophagy. PMID 30696339 DOI: 10.1080/15548627.2019.1575162  1
2019 Memisoglu G, Eapen VV, Yang Y, Klionsky DJ, Haber JE. PP2C phosphatases promote autophagy by dephosphorylation of the Atg1 complex. Proceedings of the National Academy of Sciences of the United States of America. PMID 30655342 DOI: 10.1073/Pnas.1817078116  1
2019 Klionsky DJ. Teaching the telephone book. Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology. 47: 106. PMID 30548376 DOI: 10.1002/Bmb.21193  0.01
2019 Gatica D, Hu G, Liu X, Zhang N, Williamson PR, Klionsky DJ. The Pat1-Lsm Complex Stabilizes ATG mRNA during Nitrogen Starvation-Induced Autophagy. Molecular Cell. 73: 314-324.e4. PMID 30527663 DOI: 10.1016/J.Molcel.2018.11.002  1
2019 Qiao Y, Choi JE, Vo JN, Tien JC, Wang L, Xiao L, Simko SA, Delekta AD, Hodge NB, Desai P, Juckette K, Xu A, Su F, Wang R, Cao X, ... ... Klionsky DJ, et al. Abstract 4153: Therapeutic targeting autophagy to sensitize cancer immunotherapy in various cancer types Cancer Research. 79: 4153-4153. DOI: 10.1158/1538-7445.Am2019-4153  1
2018 Liu X, Wen X, Klionsky DJ. ER-mitochondria contacts are required for pexophagy in . Contact (Thousand Oaks (Ventura County, Calif.)). 2. PMID 30859155 DOI: 10.1177/2515256418821584  1
2018 Liu X, Klionsky DJ. Regulation of JMY's actin nucleation activity by TTC5/STRAP and LC3 during autophagy. Autophagy. PMID 30593260 DOI: 10.1080/15548627.2018.1564417  1
2018 Delorme-Axford E, Klionsky DJ. On the edge of degradation: Autophagy regulation by RNA decay. Wiley Interdisciplinary Reviews. Rna. e1522. PMID 30560575 DOI: 10.1002/Wrna.1522  1
2018 Parzych KR, Klionsky DJ. Vacuolar hydrolysis and efflux: current knowledge and unanswered questions. Autophagy. 1-16. PMID 30422029 DOI: 10.1080/15548627.2018.1545821  1
2018 Delorme-Axford E, Klionsky DJ. Inflammatory-dependent Sting activation induces antiviral autophagy to limit zika virus in the Drosophila brain. Autophagy. PMID 30354937 DOI: 10.1080/15548627.2018.1539585  1
2018 Klionsky DJ. MAP1A/BLC3? Now I am really confused. Autophagy. 14: 2033-2034. PMID 30296899 DOI: 10.1080/15548627.2018.1528810  0.01
2018 Kang R, Xie Y, Zeh HJ, Klionsky DJ, Tang D. Mitochondrial Quality Control Mediated by PINK1 and PRKN: Links to Iron Metabolism and Tumor Immunity. Autophagy. PMID 30252570 DOI: 10.1080/15548627.2018.1526611  1
2018 Popelka H, Klionsky DJ. Structural basis for extremely strong binding affinity of giant ankyrins to LC3/GABARAP and its application in the inhibition of autophagy. Autophagy. 14: 1847-1849. PMID 30231788 DOI: 10.1080/15548627.2018.1522884  1
2018 Mohammadinejad R, Moosavi MA, Tavakol S, Vardar DÖ, Hosseini A, Rahmati M, Dini L, Hussain S, Mandegary A, Klionsky DJ. Necrotic, apoptotic and autophagic cell fates triggered by nanoparticles. Autophagy. PMID 30160607 DOI: 10.1080/15548627.2018.1509171  0.01
2018 Kang R, Zhu S, Zeh HJ, Klionsky DJ, Tang D. BECN1 is a New Driver of Ferroptosis. Autophagy. PMID 30145930 DOI: 10.1080/15548627.2018.1513758  1
2018 Klionsky DJ. Why do we need to regulate autophagy (and how can we do it)? A cartoon depiction. Autophagy. PMID 30129812 DOI: 10.1080/15548627.2018.1511218  0.01
2018 Li C, Zhang Y, Cheng X, Yuan H, Zhu S, Liu J, Wen Q, Xie Y, Liu J, Kroemer G, Klionsky DJ, Lotze MT, Zeh HJ, Kang R, Tang D. PINK1 and PARK2 Suppress Pancreatic Tumorigenesis through Control of Mitochondrial Iron-Mediated Immunometabolism. Developmental Cell. PMID 30100261 DOI: 10.1016/J.Devcel.2018.07.012  1
2018 Jin M, Klionsky DJ. Finding a ribophagy receptor. Autophagy. 1-2. PMID 30067425 DOI: 10.1080/15548627.2018.1483672  1
2018 Yao Z, Klionsky DJ. Plasmodium protein UIS3 protects the parasite from autophagy clearance. Autophagy. 1-2. PMID 30067422 DOI: 10.1080/15548627.2018.1483671  1
2018 Khoriaty R, Hesketh GG, Bernard A, Weyand AC, Mellacheruvu D, Zhu G, Hoenerhoff MJ, McGee B, Everett L, Adams EJ, Zhang B, Saunders TL, Nesvizhskii AI, Klionsky DJ, Shavit JA, et al. Functions of the COPII gene paralogs SEC23A and SEC23B are interchangeable in vivo. Proceedings of the National Academy of Sciences of the United States of America. PMID 30065114 DOI: 10.1073/Pnas.1805784115  1
2018 Song X, Zhu S, Chen P, Hou W, Wen Q, Liu J, Xie Y, Liu J, Klionsky DJ, Kroemer G, Lotze MT, Zeh HJ, Kang R, Tang D. AMPK-Mediated BECN1 Phosphorylation Promotes Ferroptosis by Directly Blocking System X Activity. Current Biology : Cb. PMID 30057310 DOI: 10.1016/J.Cub.2018.05.094  1
2018 Sewell JC, Klionsky DJ. The phagophore in four dimensions-a study in wood. Autophagy. PMID 30009664 DOI: 10.1080/15548627.2018.1493315  0.01
2018 Yao J, Qiu Y, Frontera E, Jia L, Khan NW, Klionsky DJ, Ferguson TA, Thompson DA, Zacks DN. Inhibiting autophagy reduces retinal degeneration caused by protein misfolding. Autophagy. PMID 29940785 DOI: 10.1080/15548627.2018.1463121  1
2018 Deretic V, Prossnitz E, Burge M, Campen MJ, Cannon J, Liu KJ, Sklar LA, Allers L, Garcia SA, Baehrecke EH, Behrends C, Cecconi F, Codogno P, Chen GC, Elazar Z, ... ... Klionsky DJ, et al. Autophagy, Inflammation, and Metabolism (AIM) Center of Biomedical Research Excellence: supporting the next generation of autophagy researchers and fostering international collaborations. Autophagy. PMID 29938597 DOI: 10.1080/15548627.2018.1465784  1
2018 Lahiri V, Klionsky DJ. CCPG1 is a noncanonical autophagy cargo receptor essential for reticulophagy and pancreatic ER proteostasis. Autophagy. PMID 29911925 DOI: 10.1080/15548627.2018.1467199  1
2018 Popelka H, Klionsky DJ, Ragusa MJ. An atypical BAR domain protein in autophagy. Autophagy. 1-2. PMID 29799763 DOI: 10.1080/15548627.2018.1445915  1
2018 Klionsky DJ. Why do we need autophagy? A cartoon depiction. Autophagy. 1-4. PMID 29782213 DOI: 10.1080/15548627.2018.1446628  0.01
2018 van Beek N, Klionsky DJ, Reggiori F. Genetic aberrations in macroautophagy genes leading to diseases. Biochimica Et Biophysica Acta. PMID 29524522 DOI: 10.1016/J.Bbamcr.2018.03.002  1
2018 Parzych KR, Ariosa A, Mari M, Klionsky DJ. A newly characterized vacuolar serine carboxypeptidase, Atg42/Ybr139w, is required for normal vacuole function and the terminal steps of autophagy in the yeast. Molecular Biology of the Cell. PMID 29514932 DOI: 10.1091/Mbc.E17-08-0516  1
2018 Gatica D, Lahiri V, Klionsky DJ. Cargo recognition and degradation by selective autophagy. Nature Cell Biology. 20: 233-242. PMID 29476151 DOI: 10.1038/S41556-018-0037-Z  1
2018 Delorme-Axford E, Abernathy E, Lennemann NJ, Bernard A, Ariosa A, Coyne CB, Kirkegaard K, Klionsky DJ. The Exoribonuclease Xrn1 Is a Post-Transcriptional Negative Regulator of Autophagy. Autophagy. 1-47. PMID 29465287 DOI: 10.1080/15548627.2018.1441648  1
2018 Delorme-Axford E, Klionsky DJ. Transcriptional and post-transcriptional regulation of autophagy in the yeast Saccharomyces cerevisiae. The Journal of Biological Chemistry. PMID 29371397 DOI: 10.1074/Jbc.R117.804641  1
2018 Galluzzi L, Vitale I, Aaronson SA, Abrams JM, Adam D, Agostinis P, Alnemri ES, Altucci L, Amelio I, Andrews DW, Annicchiarico-Petruzzelli M, Antonov AV, Arama E, Baehrecke EH, Barlev NA, ... ... Klionsky DJ, et al. Molecular mechanisms of cell death: recommendations of the Nomenclature Committee on Cell Death 2018. Cell Death and Differentiation. PMID 29362479 DOI: 10.1038/S41418-017-0012-4  1
2018 Bucci MD, Weisenhorn E, Haws S, Yao Z, Zimmerman G, Gannon M, Taggart J, Lee T, Klionsky DJ, Russell J, Coon J, Eide DJ. An Autophagy-Independent Role for ATG41 in Sulfur Metabolism During Zinc Deficiency. Genetics. PMID 29321173 DOI: 10.1534/Genetics.117.300679  1
2018 Deretic V, Klionsky DJ. Autophagy and inflammation: a special review issue. Autophagy. 1-4. PMID 29304718 DOI: 10.1080/15548627.2017.1412229  1
2017 Gatica D, Klionsky DJ. New insights into MTORC1 amino acid sensing and activation. Biotarget. 1. PMID 30159546 DOI: 10.21037/biotarget.2017.04.01  1
2017 Delorme-Axford E, Klionsky DJ. Secretory autophagy holds the key to lysozyme secretion during bacterial infection of the intestine. Autophagy. 1-9. PMID 29157080 DOI: 10.1080/15548627.2017.1401425  1
2017 Popelka H, Damasio A, Hinshaw JE, Klionsky DJ, Ragusa MJ. Structure and function of yeast Atg20, a sorting nexin that facilitates autophagy induction. Proceedings of the National Academy of Sciences of the United States of America. PMID 29114050 DOI: 10.1073/Pnas.1708367114  1
2017 Liu X, Klionsky DJ. Regulation of autophagic lysosome reformation by kinesin 1, clathrin and phosphatidylinositol-4,5-bisphosphate. Autophagy. 0. PMID 28980869 DOI: 10.1080/15548627.2017.1386821  1
2017 Kondratskyi A, Kondratska K, Skryma R, Klionsky DJ, Prevarskaya N. Ion channels in the regulation of autophagy. Autophagy. 0. PMID 28980859 DOI: 10.1080/15548627.2017.1384887  0.01
2017 Nanji T, Liu X, Chew LH, Li FK, Biswas M, Yu ZQ, Lu S, Dong MQ, Du LL, Klionsky DJ, Yip CK. Conserved and unique features of the fission yeast core Atg1 complex. Autophagy. 0. PMID 28976798 DOI: 10.1080/15548627.2017.1382782  1
2017 Klionsky DJ. Education is the Only Business Where the Customer is Satisfied with Less of the Product. Journal of Microbiology & Biology Education. 18. PMID 28861139 DOI: 10.1128/Jmbe.V18I2.1358  0.01
2017 Wen X, Klionsky DJ. BRD4 is a newly characterized transcriptional regulator that represses autophagy and lysosomal function. Autophagy. 0. PMID 28837371 DOI: 10.1080/15548627.2017.1364334  1
2017 Klionsky DJ. The puncta enigma. Autophagy. 0. PMID 28806150 DOI: 10.1080/15548627.2017.1349043  0.01
2017 Feng Y, Klionsky DJ. Receptors make the pathway choice for protein degradation. Autophagy. 0. PMID 28796567 DOI: 10.1080/15548627.2017.1356553  1
2017 Jin M, Fuller GG, Han T, Yao Y, Alessi AF, Freeberg MA, Roach NP, Moresco JJ, Karnovsky A, Baba M, Yates JR, Gitler AD, Inoki K, Klionsky DJ, Kim JK. Glycolytic Enzymes Coalesce in G Bodies under Hypoxic Stress. Cell Reports. 20: 895-908. PMID 28746874 DOI: 10.1016/J.Celrep.2017.06.082  1
2017 Feng Y, Klionsky DJ. Autophagy regulates DNA repair through SQSTM1/p62. Autophagy. 13: 995-996. PMID 28650265 DOI: 10.1080/15548627.2017.1317427  1
2017 Lahiri V, Klionsky DJ. Functional impairment in RHOT1/Miro1 degradation and mitophagy is a shared feature in familial and sporadic Parkinson disease. Autophagy. 0. PMID 28598233 DOI: 10.1080/15548627.2017.1327512  1
2017 Ariosa AR, Klionsky DJ. A novel role for a glycolytic pathway kinase in regulating autophagy has implications in cancer therapy. Autophagy. 0. PMID 28537472 DOI: 10.1080/15548627.2017.1321723  1
2017 Loos B, Klionsky DJ, Wong E. Augmenting brain metabolism to increase macro- and chaperone-mediated autophagy for decreasing neuronal proteotoxicity and aging. Progress in Neurobiology. PMID 28502807 DOI: 10.1016/J.Pneurobio.2017.05.001  1
2017 Yao Z, Liu X, Klionsky DJ. MitoPho8Δ60 Assay as a Tool to Quantitatively Measure Mitophagy Activity. Methods in Molecular Biology (Clifton, N.J.). PMID 28324486 DOI: 10.1007/7651_2017_12  1
2017 Yin Z, Klionsky DJ. HS1BP3 provides a novel mechanism of negative autophagy regulation through membrane lipids. Autophagy. 0. PMID 28323521 DOI: 10.1080/15548627.2017.1305534  1
2017 Füllgrabe J, Lynch-Day MA, Heldring N, Li W, Struijk RB, Ma Q, Hermanson O, Rosenfeld MG, Klionsky DJ, Joseph B. Corrigendum: The histone H4 lysine 16 acetyltransferase hMOF regulates the outcome of autophagy. Nature. PMID 28297710 DOI: 10.1038/Nature22027  1
2017 Lahiri V, Klionsky DJ. PHB2/prohibitin 2: An inner membrane mitophagy receptor. Cell Research. PMID 28220775 DOI: 10.1038/Cr.2017.23  1
2017 Klionsky DJ. Does relevancy matter? Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology. PMID 28220642 DOI: 10.1002/Bmb.21052  0.01
2017 Geng J, Klionsky DJ. Direct quantification of autophagic flux by a single molecule-based probe. Autophagy. 0. PMID 28165866 DOI: 10.1080/15548627.2017.1280646  1
2017 Eapen VV, Waterman DP, Bernard A, Schiffmann N, Sayas E, Kamber R, Lemos B, Memisoglu G, Ang J, Mazella A, Chuartzman SG, Loewith RJ, Schuldiner M, Denic V, Klionsky DJ, et al. A pathway of targeted autophagy is induced by DNA damage in budding yeast. Proceedings of the National Academy of Sciences of the United States of America. PMID 28154131 DOI: 10.1073/Pnas.1614364114  1
2017 Popelka H, Klionsky DJ. The molecular mechanism of Atg13 function in autophagy induction: What is hidden behind the data? Autophagy. 0. PMID 28118060 DOI: 10.1080/15548627.2016.1277312  1
2017 Feng Y, Klionsky DJ. Autophagic membrane delivery through ATG9. Cell Research. PMID 28072404 DOI: 10.1038/Cr.2017.4  1
2016 Yin Z, Pascual C, Klionsky DJ. Autophagy: machinery and regulation. Microbial Cell (Graz, Austria). 3: 588-596. PMID 28357331 DOI: 10.15698/Mic2016.12.546  1
2016 Levine B, Klionsky DJ. Autophagy wins the 2016 Nobel Prize in Physiology or Medicine: Breakthroughs in baker's yeast fuel advances in biomedical research. Proceedings of the National Academy of Sciences of the United States of America. PMID 28039434 DOI: 10.1073/Pnas.1619876114  1
2016 Mao K, Klionsky DJ. Xenophagy: A battlefield between host and microbe, and a possible avenue for cancer treatment. Autophagy. 0. PMID 28026986 DOI: 10.1080/15548627.2016.1267075  1
2016 Klionsky DJ. Blame it on Southern, but it's a western blot. Autophagy. 0. PMID 27893304 DOI: 10.1080/15548627.2016.1255382  0.01
2016 Sasaki T, Lian S, Khan A, Llop JR, Samuelson AV, Chen W, Klionsky DJ, Kishi S. Autolysosome biogenesis and developmental senescence are regulated by both Spns1 and v-ATPase. Autophagy. 0. PMID 27875093 DOI: 10.1080/15548627.2016.1256934  1
2016 Xu Z, Klionsky DJ. The AMPK-SKP2-CARM1 axis links nutrient sensing to transcriptional and epigenetic regulation of autophagy. Annals of Translational Medicine. 4: S7. PMID 27867975 DOI: 10.21037/Atm.2016.08.68  1
2016 Hu G, McQuiston T, Bernard A, Park YD, Qiu J, Vural A, Zhang N, Waterman SR, Blewett NH, Myers TG, Kehrl JH, Uzel G, Klionsky DJ, Williamson PR. Tor-dependent post-transcriptional regulation of autophagy: Implications for cancer therapeutics. Molecular & Cellular Oncology. 3: e1078923. PMID 27857968 DOI: 10.1080/23723556.2015.1078923  1
2016 Kang R, Zeng L, Xie Y, Yan Z, Zhou B, Cao L, Klionsky DJ, Tracey KJ, Li J, Wang H, Billiar TR, Jiang J, Tang D. A Novel PINK1- and PARK2-dependent Protective Neuroimmune Pathway in Lethal Sepsis. Autophagy. 0. PMID 27754761 DOI: 10.1080/15548627.2016.1239678  1
2016 Yao J, Jia L, Feathers K, Lin C, Khan NW, Klionsky DJ, Ferguson TA, Zacks DN. Autophagy-mediated catabolism of visual transduction proteins prevents retinal degeneration. Autophagy. 0. PMID 27753525 DOI: 10.1080/15548627.2016.1238553  1
2016 Yao Z, Klionsky DJ. An unconventional pathway for mitochondrial protein degradation. Autophagy. 0. PMID 27686525 DOI: 10.1080/15548627.2016.1235127  1
2016 Ariosa AR, Klionsky DJ. Autophagy core machinery: overcoming spatial barriers in neurons. Journal of Molecular Medicine (Berlin, Germany). PMID 27544281 DOI: 10.1007/S00109-016-1461-9  1
2016 Xu Z, Klionsky DJ. Autophagy promotes cell motility by driving focal adhesion turnover. Autophagy. 0. PMID 27483986 DOI: 10.1080/15548627.2016.1212791  1
2016 Saera-Vila A, Kish PE, Louie KW, Grzegorski SJ, Klionsky DJ, Kahana A. Autophagy Regulates Cytoplasmic Remodeling During Cell Reprogramming in a Zebrafish Model of Muscle Regeneration. Autophagy. 0. PMID 27467399 DOI: 10.1080/15548627.2016.1207015  0.01
2016 Grose C, Klionsky DJ. Alternative autophagy, brefeldin A and viral trafficking pathways. Autophagy. 0. PMID 27439673 DOI: 10.1080/15548627.2016.1203489  0.01
2016 Chakrabarti M, Klionsky DJ, Ray SK. miR-30e Blocks Autophagy and Acts Synergistically with Proanthocyanidin for Inhibition of AVEN and BIRC6 to Increase Apoptosis in Glioblastoma Stem Cells and Glioblastoma SNB19 Cells. Plos One. 11: e0158537. PMID 27388765 DOI: 10.1371/Journal.Pone.0158537  1
2016 Ying ZX, Jin M, Peterson LF, Bernard D, Saiya-Cork K, Yildiz M, Wang S, Kaminski M, Chang A, Klionsky DJ, Malek S. Recurrent mutations in the MTOR regulator RRAGC in follicular lymphoma. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 27267853 DOI: 10.1158/1078-0432.Ccr-16-0609  1
2016 Wen X, Klionsky DJ. The proteasome subunit RPN10 functions as a specific receptor for degradation of the 26S proteasome by macroautophagy in Arabidopsis. Autophagy. 1-2. PMID 27159576 DOI: 10.1080/15548627.2016.1171949  1
2016 Codogno P, Klionsky DJ. Opening new doors in autophagy research: Patrice Codogno. Autophagy. 1-6. PMID 27158743 DOI: 10.1080/15548627.2016.1170267  1
2016 Burmeister M, Lee JH, Schulman BA, Yapici Z, Tolun A, Juhasz G, Li JZ, Klionsky DJ. A role of autophagy in spinocerebellar ataxia-rare exception or general principle? Autophagy. 0. PMID 27105143 DOI: 10.1080/15548627.2016.1170266  1
2016 Feng Y, Klionsky DJ. Downregulation of autophagy through CUL3-KLHL20 mediated turnover of the ULK1 and PIK3C3/VPS34 complexes. Autophagy. 0. PMID 27096860 DOI: 10.1080/15548627.2016.1173802  1
2016 Feng Y, Backues SK, Baba M, Heo JM, Harper JW, Klionsky DJ. Phosphorylation of Atg9 regulates movement to the phagophore assembly site and the rate of autophagosome formation. Autophagy. 12: 648-58. PMID 27050455 DOI: 10.1080/15548627.2016.1157237  1
2016 Wen X, Klionsky DJ. Autophagy is a key factor in maintaining the regenerative capacity of muscle stem cells by promoting quiescence and preventing senescence. Autophagy. 12: 617-618. PMID 27050452 DOI: 10.1080/15548627.2016.1158373  1
2016 Klionsky DJ. Seeking punctuation clarity-that is, the proper use of the hyphen and dashes-for publishing in Autophagy. Autophagy. 12: 449-50. PMID 27046248 DOI: 10.1080/15548627.2016.1155016  1
2016 Liu X, Klionsky DJ. The Atg17-Atg31-Atg29 complex and Atg11 regulate autophagosome-vacuole fusion. Autophagy. 0. PMID 26986547 DOI: 10.1080/15548627.2016.1162364  1
2016 Klionsky DJ. Developing a set of guidelines for your research field: a practical approach. Molecular Biology of the Cell. 27: 733-8. PMID 26915690 DOI: 10.1091/Mbc.E15-09-0618  1
2016 Wen X, Klionsky DJ. An overview of macroautophagy in yeast. Journal of Molecular Biology. PMID 26908221 DOI: 10.1016/J.Jmb.2016.02.021  1
2016 Klionsky DJ, Abdelmohsen K, Abe A, Abedin J, Abeliovich H, Arozena AA, Adachi H, Adams CM, Adams PD, Adeli K, Adhihetty PJ, Adler SG, Agam G, Agarwal R, Aghi MK, et al. Erratum to: Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) (Autophagy, 12, 1, 1-222, 10.1080/15548627.2015.1100356 Autophagy. 12: 443-443. PMID 26902590 DOI: 10.1080/15548627.2016.1147886  1
2016 Klionsky DJ. Stepping back from the guidelines: Where do we stand? Autophagy. 12: 223-224. PMID 26902583 DOI: 10.1080/15548627.2016.1139264  1
2016 Kim M, Sandford E, Gatica D, Qiu Y, Liu X, Zheng Y, Schulman BA, Xu J, Semple I, Ro SH, Kim B, Mavioglu RN, Tolun A, Jipa A, Takats S, ... ... Klionsky DJ, et al. Mutation in ATG5 reduces autophagy and leads to ataxia with developmental delay. Elife. 5. PMID 26812546 DOI: 10.7554/Elife.12245  1
2016 Liu X, Mao K, Yu AY, Omairi-Nasser A, Austin J, Glick BS, Yip CK, Klionsky DJ. The Atg17-Atg31-Atg29 Complex Coordinates with Atg11 to Recruit the Vam7 SNARE and Mediate Autophagosome-Vacuole Fusion. Current Biology : Cb. PMID 26774783 DOI: 10.1016/J.Cub.2015.11.054  1
2016 Kim M, Sandford E, Gatica D, Qiu Y, Liu X, Zheng Y, Schulman BA, Xu J, Semple I, Ro S, Kim B, Mavioglu RN, Tolun A, Jipa A, Takats S, ... ... Klionsky DJ, et al. Author response: Mutation in ATG5 reduces autophagy and leads to ataxia with developmental delay Elife. DOI: 10.7554/Elife.12245.017  1
2015 Hu G, McQuiston T, Bernard A, Park YD, Qiu J, Vural A, Zhang N, Waterman SR, Blewett NH, Myers TG, Kehrl JH, Uzel G, Klionsky DJ, Williamson PR. The role of transcriptional 'futile cycles' in autophagy and microbial pathogenesis. Microbial Cell (Graz, Austria). 2: 302-304. PMID 28357306 DOI: 10.15698/Mic2015.08.221  1
2015 Griswold EN, Klionsky DJ. Lifeguard Final Exam-Encouraging the Use of Active Learning. Journal of Microbiology & Biology Education. 16: 133-5. PMID 26753019 DOI: 10.1128/Jmbe.V16I2.945  1
2015 Bernard A, Jin M, Xu Z, Klionsky DJ. A large-scale analysis of autophagy-related gene expression identifies new regulators of autophagy. Autophagy. 11: 2114-2122. PMID 26649943 DOI: 10.1080/15548627.2015.1099796  1
2015 Hu G, McQuiston T, Bernard A, Park YD, Qiu J, Vural A, Zhang N, Waterman SR, Blewett NH, Myers TG, Maraia RJ, Kehrl JH, Uzel G, Klionsky DJ, Williamson PR. TOR-dependent Post-transcriptional Regulation of Autophagy. Autophagy. 0. PMID 26569496 DOI: 10.1080/15548627.2015.1091142  1
2015 Delorme-Axford E, Klionsky DJ. A missing piece of the puzzle: Atg11 functions as a scaffold to activate Atg1 for selective autophagy. Autophagy. 11: 2139-41. PMID 26566077 DOI: 10.1080/15548627.2015.1116672  1
2015 Yao Z, Delorme-Axford E, Backues SK, Klionsky DJ. Atg41/Icy2 regulates autophagosome formation. Autophagy. 0. PMID 26565778 DOI: 10.1080/15548627.2015.1107692  1
2015 Popelka H, Klionsky DJ. Analysis of the native conformation of the LIR/AIM motif in the Atg8/LC3/GABARAP-binding proteins. Autophagy. 11: 2153-9. PMID 26565669 DOI: 10.1080/15548627.2015.1111503  1
2015 Jin M, Klionsky DJ. The amino acid transporter SLC38A9 regulates MTORC1 and autophagy. Autophagy. 11: 1709-10. PMID 26506891 DOI: 10.1080/15548627.2015.1084461  1
2015 Cheong H, Klionsky DJ. mTORC1 maintains metabolic balance. Cell Research. 25: 1085-6. PMID 26358187 DOI: 10.1038/Cr.2015.107  1
2015 Popelka H, Klionsky DJ. One step closer to understanding mammalian macroautophagy initiation: Interplay of 2 HORMA architectures in the ULK1 complex. Autophagy. 11: 1953-1955. PMID 26325630 DOI: 10.1080/15548627.2015.1087635  1
2015 van den Berg H, Klionsky DJ. Wouter G van Doorn, December 13, 1951--May 16, 2015. Autophagy. 11: 1197. PMID 26273908 DOI: 10.1080/15548627.2015.1062962  0.01
2015 Liu X, Klionsky DJ. The TP53INP2/DOR protein chaperones deacetylated nuclear LC3 to the cytoplasm to promote macroautophagy. Autophagy. 0. PMID 26213321 DOI: 10.1080/15548627.2015.1074373  1
2015 Griswold EN, Klionsky DJ. …But is it an improvement? Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology. 43: 301-2. PMID 26173430 DOI: 10.1002/Bmb.20880  1
2015 Popelka H, Klionsky DJ. Post-translationally-modified structures in the autophagy machinery: an integrative perspective. The Febs Journal. 282: 3474-88. PMID 26108642 DOI: 10.1111/Febs.13356  1
2015 Hu G, McQuiston T, Bernard A, Park YD, Qiu J, Vural A, Zhang N, Waterman SR, Blewett NH, Myers TG, Maraia RJ, Kehrl JH, Uzel G, Klionsky DJ, Williamson PR. A conserved mechanism of TOR-dependent RCK-mediated mRNA degradation regulates autophagy. Nature Cell Biology. PMID 26098573 DOI: 10.1038/Ncb3189  1
2015 Yao J, Jia L, Khan N, Lin C, Mitter SK, Boulton ME, Dunaief JL, Klionsky DJ, Guan JL, Thompson DA, Zacks DN. Deletion of autophagy inducer RB1CC1 results in degeneration of the retinal pigment epithelium. Autophagy. 11: 939-53. PMID 26075877 DOI: 10.1080/15548627.2015.1041699  1
2015 Gatica D, Klionsky DJ. TOS-sing aside the glycolytic role of HK2/hexokinase-II to activate autophagy. Autophagy. 11: 865-6. PMID 26075875 DOI: 10.1080/15548627.2015.1042196  1
2015 Yao Z, Klionsky DJ. The symphony of autophagy and calcium signaling. Autophagy. 0. PMID 26046237 DOI: 10.1080/15548627.2015.1058475  1
2015 Chew LH, Lu S, Liu X, Li FK, Yu AY, Klionsky DJ, Dong MQ, Yip CK. Molecular interactions of the Saccharomyces cerevisiae Atg1 complex provide insights into assembly and regulatory mechanisms. Autophagy. 11: 891-905. PMID 25998554 DOI: 10.1080/15548627.2015.1040972  1
2015 Griswold EN, Klionsky DJ. Letter to the editor. Journal of Microbiology & Biology Education. 16: 5. PMID 25949750 DOI: 10.1128/jmbe.v16i1.910  1
2015 Bernard A, Klionsky DJ. Toward an understanding of autophagosome-lysosome fusion: The unsuspected role of ATG14. Autophagy. 11: 583-4. PMID 25920502 DOI: 10.1080/15548627.2015.1029220  1
2015 Klionsky DJ. Autophagy: research topic, painting, poem, dance…: The combination of art and information can enhance the enjoyment and effectiveness of learning. Embo Reports. 16: 547-52. PMID 25838538 DOI: 10.15252/Embr.201540400  1
2015 Ariosa AR, Klionsky DJ. Long-distance autophagy. Autophagy. 11: 193-4. PMID 25831012 DOI: 10.1080/15548627.2015.1009790  1
2015 Griswold EN, Klionsky DJ. Not learning how to ride a bike: The lecture approach. Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology. 43: 210. PMID 25787694 DOI: 10.1002/Bmb.20854  1
2015 Feng Y, Yao Z, Klionsky DJ. How to control self-digestion: transcriptional, post-transcriptional, and post-translational regulation of autophagy. Trends in Cell Biology. 25: 354-63. PMID 25759175 DOI: 10.1016/J.Tcb.2015.02.002  1
2015 Bernard A, Klionsky DJ. Rph1 mediates the nutrient-limitation signaling pathway leading to transcriptional activation of autophagy. Autophagy. 11: 718-9. PMID 25751780 DOI: 10.1080/15548627.2015.1018503  1
2015 Crumrine BM, Klionsky DJ. Quiltophagy--autophagy as folk art. Autophagy. 11: 195-9. PMID 25714985 DOI: 10.1080/15548627.2015.1017196  1
2015 Bernard A, Jin M, González-Rodríguez P, Füllgrabe J, Delorme-Axford E, Backues SK, Joseph B, Klionsky DJ. Rph1/KDM4 mediates nutrient-limitation signaling that leads to the transcriptional induction of autophagy. Current Biology : Cb. 25: 546-55. PMID 25660547 DOI: 10.1016/J.Cub.2014.12.049  1
2015 Gatica D, Chiong M, Lavandero S, Klionsky DJ. Molecular mechanisms of autophagy in the cardiovascular system. Circulation Research. 116: 456-67. PMID 25634969 DOI: 10.1161/Circresaha.114.303788  1
2015 Klionsky DJ. A few key points about figure presentation. Autophagy. 11: 1-8. PMID 25607738 DOI: 10.1080/15548627.2014.996046  1
2015 Delorme-Axford E, Guimaraes RS, Reggiori F, Klionsky DJ. The yeast Saccharomyces cerevisiae: an overview of methods to study autophagy progression. Methods (San Diego, Calif.). 75: 3-12. PMID 25526918 DOI: 10.1016/J.Ymeth.2014.12.008  1
2015 Guimaraes RS, Delorme-Axford E, Klionsky DJ, Reggiori F. Assays for the biochemical and ultrastructural measurement of selective and nonselective types of autophagy in the yeast Saccharomyces cerevisiae. Methods (San Diego, Calif.). 75: 141-50. PMID 25484341 DOI: 10.1016/J.Ymeth.2014.11.023  1
2015 Xie Y, Kang R, Sun X, Zhong M, Huang J, Klionsky DJ, Tang D. Posttranslational modification of autophagy-related proteins in macroautophagy. Autophagy. 11: 28-45. PMID 25484070 DOI: 10.4161/15548627.2014.984267  1
2015 Backues SK, Orban DP, Bernard A, Singh K, Cao Y, Klionsky DJ. Atg23 and Atg27 act at the early stages of Atg9 trafficking in S. cerevisiae. Traffic (Copenhagen, Denmark). 16: 172-90. PMID 25385507 DOI: 10.1111/Tra.12240  1
2015 Galluzzi L, Bravo-San Pedro JM, Vitale I, Aaronson SA, Abrams JM, Adam D, Alnemri ES, Altucci L, Andrews D, Annicchiarico-Petruzzelli M, Baehrecke EH, Bazan NG, Bertrand MJ, Bianchi K, Blagosklonny MV, ... ... Klionsky DJ, et al. Essential versus accessory aspects of cell death: recommendations of the NCCD 2015. Cell Death and Differentiation. 22: 58-73. PMID 25236395 DOI: 10.1038/Cdd.2014.137  1
2015 Gramatikoff K, Nguyen A, Cuervo AM, Klionsky D. From misfolding to autophagy and disease F1000research. 6. DOI: 10.7490/F1000Research.1097460.1  1
2015 Liu X, Klionsky DJ. Autophagy and Immunity Autophagy, Infection, and the Immune Response. 1-17. DOI: 10.1002/9781118677551.ch1  1
2014 Orban DP, Klionsky DJ. CUET-ting edge research. Autophagy. 10: 2097-8. PMID 25590262 DOI: 10.4161/15548627.2014.995012  1
2014 Ochaba J, Lukacsovich T, Csikos G, Zheng S, Margulis J, Salazar L, Mao K, Lau AL, Yeung SY, Humbert S, Saudou F, Klionsky DJ, Finkbeiner S, Zeitlin SO, Marsh JL, et al. Potential function for the Huntingtin protein as a scaffold for selective autophagy. Proceedings of the National Academy of Sciences of the United States of America. 111: 16889-94. PMID 25385587 DOI: 10.1073/Pnas.1420103111  1
2014 Klionsky DJ. Coming soon to a journal near you — the updated guidelines for the use and interpretation of assays for monitoring autophagy. Autophagy. 10: 1691. PMID 25208091 DOI: 10.4161/Auto.36187  1
2014 Klionsky DJ. Following your interests: the importance of good mentors. Nature Cell Biology. 16: 823. PMID 25174817 DOI: 10.1038/Ncb3033  1
2014 An Z, Tassa A, Thomas C, Zhong R, Xiao G, Fotedar R, Tu BP, Klionsky DJ, Levine B. Autophagy is required for G₁/G₀ quiescence in response to nitrogen starvation in Saccharomyces cerevisiae. Autophagy. 10: 1702-11. PMID 25126732 DOI: 10.4161/Auto.32122  1
2014 Jin M, Klionsky DJ. Transcriptional regulation of ATG9 by the Pho23-Rpd3 complex modulates the frequency of autophagosome formation. Autophagy. 10: 1681-2. PMID 25046109 DOI: 10.4161/Auto.29641  1
2014 Klionsky DJ, Thorburn A. Clinical research and Autophagy. Autophagy. 10: 1357-8. PMID 24991837 DOI: 10.4161/Auto.29159  1
2014 Sasaki T, Lian S, Qi J, Bayliss PE, Carr CE, Johnson JL, Guha S, Kobler P, Catz SD, Gill M, Jia K, Klionsky DJ, Kishi S. Aberrant autolysosomal regulation is linked to the induction of embryonic senescence: differential roles of Beclin 1 and p53 in vertebrate Spns1 deficiency. Plos Genetics. 10: e1004409. PMID 24967584 DOI: 10.1371/Journal.Pgen.1004409  1
2014 Jin M, Klionsky DJ. Regulation of autophagy: modulation of the size and number of autophagosomes. Febs Letters. 588: 2457-63. PMID 24928445 DOI: 10.1016/J.Febslet.2014.06.015  1
2014 Jin M, He D, Backues SK, Freeberg MA, Liu X, Kim JK, Klionsky DJ. Transcriptional regulation by Pho23 modulates the frequency of autophagosome formation. Current Biology : Cb. 24: 1314-22. PMID 24881874 DOI: 10.1016/J.Cub.2014.04.048  1
2014 Popelka H, Uversky VN, Klionsky DJ. Identification of Atg3 as an intrinsically disordered polypeptide yields insights into the molecular dynamics of autophagy-related proteins in yeast. Autophagy. 10: 1093-104. PMID 24879155 DOI: 10.4161/Auto.28616  1
2014 Klionsky DJ. Citing recent declines in the discovery of new ATG genes, some scientists now suggest that the end of autophagy research may be within sight. Autophagy. 10: 715-6. PMID 24714412 DOI: 10.4161/Auto.28813  1
2014 Klionsky DJ, Schulman BA. Dynamic regulation of macroautophagy by distinctive ubiquitin-like proteins. Nature Structural & Molecular Biology. 21: 336-45. PMID 24699082 DOI: 10.1038/Nsmb.2787  1
2014 Lee WW, Klionsky DJ. Macromusophagy: A solo piano musical representation of macroautophagy. Autophagy. 10: 721-35. PMID 24675240 DOI: 10.4161/Auto.27965  1
2014 Klionsky DJ, Eskelinen EL, Deretic V. Autophagosomes, phagosomes, autolysosomes, phagolysosomes, autophagolysosomes... wait, I'm confused. Autophagy. 10: 549-51. PMID 24657946 DOI: 10.4161/Auto.28448  1
2014 Jin N, Mao K, Jin Y, Tevzadze G, Kauffman EJ, Park S, Bridges D, Loewith R, Saltiel AR, Klionsky DJ, Weisman LS. Roles for PI(3,5)P2 in nutrient sensing through TORC1. Molecular Biology of the Cell. 25: 1171-85. PMID 24478451 DOI: 10.1091/Mbc.E14-01-0021  1
2014 Mao K, Liu X, Feng Y, Klionsky DJ. The progression of peroxisomal degradation through autophagy requires peroxisomal division. Autophagy. 10: 652-61. PMID 24451165 DOI: 10.4161/Auto.27852  1
2014 Miller-Fleming L, Cheong H, Antas P, Klionsky DJ. Detection of Saccharomyces cerevisiae Atg13 by western blot. Autophagy. 10: 514-7. PMID 24430166 DOI: 10.4161/Auto.27707  1
2014 Feng Y, He D, Yao Z, Klionsky DJ. The machinery of macroautophagy. Cell Research. 24: 24-41. PMID 24366339 DOI: 10.1038/Cr.2013.168  1
2014 Klionsky DJ, Eskelinen EL. The vacuole versus the lysosome: when size matters. Autophagy. 10: 185-7. PMID 24343261 DOI: 10.4161/Auto.27367  1
2014 Füllgrabe J, Klionsky DJ, Joseph B. The return of the nucleus: transcriptional and epigenetic control of autophagy. Nature Reviews. Molecular Cell Biology. 15: 65-74. PMID 24326622 DOI: 10.1038/Nrm3716  1
2014 Varga M, Sass M, Papp D, Takács-Vellai K, Kobolak J, Dinnyés A, Klionsky DJ, Vellai T. Autophagy is required for zebrafish caudal fin regeneration Cell Death and Differentiation. 21: 547-556. PMID 24317199 DOI: 10.1038/Cdd.2013.175  1
2014 Belaid A, Ndiaye PD, Cerezo M, Cailleteau L, Brest P, Klionsky DJ, Carle GF, Hofman P, Mograbi B. Autophagy and SQSTM1 on the RHOA(d) again: emerging roles of autophagy in the degradation of signaling proteins. Autophagy. 10: 201-8. PMID 24300375 DOI: 10.4161/Auto.27198  1
2014 Backues SK, Chen D, Ruan J, Xie Z, Klionsky DJ. Estimating the size and number of autophagic bodies by electron microscopy. Autophagy. 10: 155-64. PMID 24270884 DOI: 10.4161/Auto.26856  1
2014 Bernard A, Klionsky DJ. Defining the membrane precursor supporting the nucleation of the phagophore. Autophagy. 10: 1-2. PMID 24257021 DOI: 10.4161/Auto.27242  1
2014 Kyrychenko VO, Nagibin VS, Tumanovska LV, Pashevin DO, Gurianova VL, Moibenko AA, Dosenko VE, Klionsky DJ. Knockdown of PSMB7 induces autophagy in cardiomyocyte cultures: possible role in endoplasmic reticulum stress. Pathobiology : Journal of Immunopathology, Molecular and Cellular Biology. 81: 8-14. PMID 23969338 DOI: 10.1159/000350704  0.01
2014 Parzych KR, Klionsky DJ. An overview of autophagy: morphology, mechanism, and regulation. Antioxidants & Redox Signaling. 20: 460-73. PMID 23725295 DOI: 10.1089/Ars.2013.5371  1
2014 Wang K, Klionsky DJ. Molecular Process and Physiological Significance of Mitophagy Autophagy: Cancer, Other Pathologies, Inflammation, Immunity, Infection, and Aging. 4: 49-63. DOI: 10.1016/B978-0-12-405528-5.00002-X  1
2013 Campanella M, Klionsky DJ. Keeping the engine clean: a mitophagy task for cellular physiology. Autophagy. 9: 1647. PMID 24162014 DOI: 10.4161/Auto.26915  1
2013 Mao K, Chew LH, Yip CK, Klionsky DJ. The role of Atg29 phosphorylation in PAS assembly. Autophagy. 9: 2178-9. PMID 24141181 DOI: 10.4161/Auto.26740  1
2013 Kovács AL, Klionsky DJ. A pioneer in the field of autophagy microscopy: Attila L Kovács. Autophagy. 9: 1908-21. PMID 24135977 DOI: 10.4161/Auto.26613  1
2013 Wang K, Jin M, Liu X, Klionsky DJ. Proteolytic processing of Atg32 by the mitochondrial i-AAA protease Yme1 regulates mitophagy. Autophagy. 9: 1828-36. PMID 24025448 DOI: 10.4161/Auto.26281  1
2013 Mao K, Klionsky DJ. Mitochondrial fission facilitates mitophagy in Saccharomyces cerevisiae. Autophagy. 9: 1900-1. PMID 24025250 DOI: 10.4161/Auto.25804  1
2013 Mao K, Klionsky DJ. Participation of mitochondrial fission during mitophagy. Cell Cycle (Georgetown, Tex.). 12: 3131-2. PMID 24013417 DOI: 10.4161/Cc.26352  1
2013 Belaid A, Ndiaye PD, Klionsky DJ, Hofman P, Mograbi B. Signalphagy: scheduled signal termination by macroautophagy. Autophagy. 9: 1629-30. PMID 24004837 DOI: 10.4161/Auto.25880  1
2013 Chew LH, Setiaputra D, Klionsky DJ, Yip CK. Structural characterization of the Saccharomyces cerevisiae autophagy regulatory complex Atg17-Atg31-Atg29. Autophagy. 9: 1467-74. PMID 23939028 DOI: 10.4161/Auto.25687  1
2013 Füllgrabe J, Klionsky DJ, Joseph B. Histone post-translational modifications regulate autophagy flux and outcome. Autophagy. 9: 1621-3. PMID 23934085 DOI: 10.4161/Auto.25803  1
2013 Füllgrabe J, Lynch-Day MA, Heldring N, Li W, Struijk RB, Ma Q, Hermanson O, Rosenfeld MG, Klionsky DJ, Joseph B. The histone H4 lysine 16 acetyltransferase hMOF regulates the outcome of autophagy. Nature. 500: 468-71. PMID 23863932 DOI: 10.1038/Nature12313  1
2013 Mao K, Chew LH, Inoue-Aono Y, Cheong H, Nair U, Popelka H, Yip CK, Klionsky DJ. Atg29 phosphorylation regulates coordination of the Atg17-Atg31-Atg29 complex with the Atg11 scaffold during autophagy initiation. Proceedings of the National Academy of Sciences of the United States of America. 110: E2875-84. PMID 23858448 DOI: 10.1073/Pnas.1300064110  1
2013 Loos B, Engelbrecht AM, Lockshin RA, Klionsky DJ, Zakeri Z. The variability of autophagy and cell death susceptibility: Unanswered questions. Autophagy. 9: 1270-85. PMID 23846383 DOI: 10.4161/Auto.25560  1
2013 Mao K, Wang K, Liu X, Klionsky DJ. The scaffold protein Atg11 recruits fission machinery to drive selective mitochondria degradation by autophagy. Developmental Cell. 26: 9-18. PMID 23810512 DOI: 10.1016/J.Devcel.2013.05.024  1
2013 Klionsky DJ, Codogno P. The mechanism and physiological function of macroautophagy. Journal of Innate Immunity. 5: 427-33. PMID 23774579 DOI: 10.1159/000351979  1
2013 Reggiori F, Klionsky DJ. Autophagic processes in yeast: mechanism, machinery and regulation. Genetics. 194: 341-61. PMID 23733851 DOI: 10.1534/Genetics.112.149013  1
2013 Belaid A, Cerezo M, Chargui A, Corcelle-Termeau E, Pedeutour F, Giuliano S, Ilie M, Rubera I, Tauc M, Barale S, Bertolotto C, Brest P, Vouret-Craviari V, Klionsky DJ, Carle GF, et al. Autophagy plays a critical role in the degradation of active RHOA, the control of cell cytokinesis, and genomic stability. Cancer Research. 73: 4311-22. PMID 23704209 DOI: 10.1158/0008-5472.Can-12-4142  1
2013 Bernard A, Klionsky DJ. Autophagosome formation: tracing the source. Developmental Cell. 25: 116-7. PMID 23639440 DOI: 10.1016/J.Devcel.2013.04.004  1
2013 Thompson DA, Klionsky DJ. Autophagy and gene therapy combine in the treatment of liver disease. Autophagy. 9: 945-6. PMID 23590992 DOI: 10.4161/Auto.24475  1
2013 Bernard A, Popelka H, Klionsky DJ. A unique hairpin-type tail-anchored SNARE starts to solve a long-time puzzle. Autophagy. 9: 813-4. PMID 23575358 DOI: 10.4161/Auto.24359  1
2013 Klionsky DJ. Ancient autophagy. Autophagy. 9: 445-6. PMID 23388466 DOI: 10.4161/auto.23907  1
2013 Kaiser SE, Qiu Y, Coats JE, Mao K, Klionsky DJ, Schulman BA. Structures of Atg7-Atg3 and Atg7-Atg10 reveal noncanonical mechanisms of E2 recruitment by the autophagy E1. Autophagy. 9: 778-80. PMID 23388412 DOI: 10.4161/Auto.23644  1
2013 Jin M, Liu X, Klionsky DJ. SnapShot: Selective autophagy. Cell. 152: 368-368.e2. PMID 23332767 DOI: 10.1016/J.Cell.2013.01.004  1
2013 Klionsky DJ. Finding autophagy: it's a question of how you look at it. Autophagy. 9: 267. PMID 23322216 DOI: 10.4161/Auto.23483  1
2013 Deffieu M, Bhatia-Kiššová I, Salin B, Klionsky DJ, Pinson B, Manon S, Camougrand N. Increased levels of reduced cytochrome b and mitophagy components are required to trigger nonspecific autophagy following induced mitochondrial dysfunction. Journal of Cell Science. 126: 415-26. PMID 23230142 DOI: 10.1242/Jcs.103713  0.01
2013 Klionsky DJ. Why just eat in, when you can also eat out? Autophagy. 9: 119. PMID 23159909 DOI: 10.4161/Auto.22915  1
2013 Klionsky DJ. The intense gravitational attraction of autophagy Autophagy. 9: 1127-1128. DOI: 10.4161/Auto.25572  1
2013 Belaid A, N'diaye PD, Cerezo M, Brest P, Klionsky DJ, Carle GF, Hofman P, Mograbi B. Abstract A224: Autophagy and SQSTM1 on the RHOA(d) again. Molecular Cancer Therapeutics. 12. DOI: 10.1158/1535-7163.Targ-13-A224  1
2012 Kaiser SE, Mao K, Taherbhoy AM, Yu S, Olszewski JL, Duda DM, Kurinov I, Deng A, Fenn TD, Klionsky DJ, Schulman BA. Noncanonical E2 recruitment by the autophagy E1 revealed by Atg7-Atg3 and Atg7-Atg10 structures. Nature Structural & Molecular Biology. 19: 1242-9. PMID 23142976 DOI: 10.1038/Nsmb.2415  1
2012 Wang K, Yang Z, Liu X, Mao K, Nair U, Klionsky DJ. Phosphatidylinositol 4-kinases are required for autophagic membrane trafficking. The Journal of Biological Chemistry. 287: 37964-72. PMID 22977244 DOI: 10.1074/Jbc.M112.371591  1
2012 Klionsky DJ, Abdalla FC, Abeliovich H, Abraham RT, Acevedo-Arozena A, Adeli K, Agholme L, Agnello M, Agostinis P, Aguirre-Ghiso JA, Ahn HJ, Ait-Mohamed O, Ait-Si-Ali S, Akematsu T, Akira S, et al. Guidelines for the use and interpretation of assays for monitoring autophagy. Autophagy. 8: 445-544. PMID 22966490 DOI: 10.4161/Auto.19496  1
2012 Backues SK, Lynch-Day MA, Klionsky DJ. The Ume6-Sin3-Rpd3 complex regulates ATG8 transcription to control autophagosome size. Autophagy. 8: 1835-6. PMID 22960621 DOI: 10.4161/Auto.21845  1
2012 Klionsky DJ. Look people, "Atg" is an abbreviation for "autophagy-related." That's it. Autophagy. 8: 1281-2. PMID 22889836 DOI: 10.4161/Auto.21812  1
2012 Mijaljica D, Nazarko TY, Brumell JH, Huang WP, Komatsu M, Prescott M, Simonsen A, Yamamoto A, Zhang H, Klionsky DJ, Devenish RJ. Receptor protein complexes are in control of autophagy. Autophagy. 8: 1701-5. PMID 22874568 DOI: 10.4161/Auto.21332  1
2012 Klionsky DJ, Bruford EA, Cherry JM, Hodgkin J, Laulederkind SJ, Singer AG. In the beginning there was babble... Autophagy. 8: 1165-7. PMID 22836666 DOI: 10.4161/Auto.20665  0.08
2012 Klionsky DJ. A human autophagy interaction network. Autophagy. 8: 439-41. PMID 22781101 DOI: 10.4161/Auto.19926  1
2012 Cebollero E, van der Vaart A, Zhao M, Rieter E, Klionsky DJ, Helms JB, Reggiori F. Phosphatidylinositol-3-phosphate clearance plays a key role in autophagosome completion. Current Biology : Cb. 22: 1545-53. PMID 22771041 DOI: 10.1016/J.Cub.2012.06.029  1
2012 Klionsky DJ, Bergamini E. Searching for the fountain of autophagy-dependent youth: Ettore Bergamini Autophagy. 8: 1169-1174. PMID 22739129 DOI: 10.4161/Auto.20788  1
2012 Bartholomew CR, Suzuki T, Du Z, Backues SK, Jin M, Lynch-Day MA, Umekawa M, Kamath A, Zhao M, Xie Z, Inoki K, Klionsky DJ. Ume6 transcription factor is part of a signaling cascade that regulates autophagy. Proceedings of the National Academy of Sciences of the United States of America. 109: 11206-10. PMID 22733735 DOI: 10.1073/Pnas.1200313109  1
2012 Backues SK, Klionsky DJ. Atg11: a Rab-dependent, coiled-coil membrane protein that acts as a tether for autophagy. Autophagy. 8: 1275-8. PMID 22717525 DOI: 10.4161/Auto.21153  1
2012 Yen WL, Klionsky DJ. Proteinase protection of prApe1 as a tool to monitor Cvt vesicle/autophagosome biogenesis. Autophagy. 8: 1245-9. PMID 22653261 DOI: 10.4161/Auto.20916  1
2012 Devenish RJ, Klionsky DJ. Autophagy: mechanism and physiological relevance 'brewed' from yeast studies. Frontiers in Bioscience (Scholar Edition). 4: 1354-63. PMID 22652877 DOI: 10.2741/S337  1
2012 Yu ZQ, Ni T, Hong B, Wang HY, Jiang FJ, Zou S, Chen Y, Zheng XL, Klionsky DJ, Liang Y, Xie Z. Dual roles of Atg8-PE deconjugation by Atg4 in autophagy. Autophagy. 8: 883-92. PMID 22652539 DOI: 10.4161/Auto.19652  1
2012 Klionsky DJ. The autophagy community. Autophagy. 8: 1003. PMID 22647354 DOI: 10.4161/Auto.20666  1
2012 Nair U, Yen WL, Mari M, Cao Y, Xie Z, Baba M, Reggiori F, Klionsky DJ. A role for Atg8-PE deconjugation in autophagosome biogenesis. Autophagy. 8: 780-93. PMID 22622160 DOI: 10.4161/Auto.19385  1
2012 Shimada Y, Klionsky DJ. Autophagy contributes to lysosomal storage disorders. Autophagy. 8: 715-6. PMID 22617443 DOI: 10.4161/Auto.19920  1
2012 Umekawa M, Klionsky DJ. The Cytoplasm-to-Vacuole Targeting Pathway: A Historical Perspective. International Journal of Cell Biology. 2012: 142634. PMID 22481942 DOI: 10.1155/2012/142634  1
2012 Lynch-Day MA, Mao K, Wang K, Zhao M, Klionsky DJ. The role of autophagy in Parkinson's disease. Cold Spring Harbor Perspectives in Medicine. 2: a009357. PMID 22474616 DOI: 10.1101/Cshperspect.A009357  1
2012 Umekawa M, Klionsky DJ. Ksp1 kinase regulates autophagy via the target of rapamycin complex 1 (TORC1) pathway Journal of Biological Chemistry. 287: 16300-16310. PMID 22447937 DOI: 10.1074/Jbc.M112.344952  1
2012 Klionsky DJ, Hurley JH. Self-eating with your fingers. Cell Research. 22: 783-5. PMID 22410794 DOI: 10.1038/Cr.2012.39  1
2012 Klionsky DJ, Saltiel AR. Autophagy works out. Cell Metabolism. 15: 273-4. PMID 22405064 DOI: 10.1016/J.Cmet.2012.02.008  1
2012 Takahashi R, Miller JH, Klionsky DJ. SNARE Dance: A musical interpretation of Atg9 transport to the tubulovesicular cluster Autophagy. 8: 294-296. PMID 22361578 DOI: 10.4161/Auto.19327  1
2012 Klionsky DJ. Protocols, toolboxes and resource papers Autophagy. 8: 291. PMID 22301999 DOI: 10.4161/Auto.19460  1
2012 Klionsky DJ. Do you want to read about a biochemic and genetical analysis of the physiologic role of the autophagical process? No Autophagy. 8: 153-154. PMID 22248717 DOI: 10.4161/Auto.8.2.18503  1
2012 Klionsky DJ, Saltiel AR. Autophagy works out Cell Metabolism. 15: 273-274. DOI: 10.1016/j.cmet.2012.02.008  1
2011 Klionsky DJ, Bartholomew CR. Quick Quiz - Is it Really Recall? Journal of Microbiology & Biology Education. 12: 78-9. PMID 23653753 DOI: 10.1128/Jmbe.V12I1.291  1
2011 Nair U, Klionsky DJ. Activation of autophagy is required for muscle homeostasis during physical exercise Autophagy. 7: 1405-1406. PMID 22082869 DOI: 10.4161/Auto.7.12.18315  1
2011 Bass A, Sauer D, Klionsky DJ. A PCR analysis of the ubiquitin-like conjugation systems in macroautophagy. Autophagy. 7: 1410-4. PMID 22024756 DOI: 10.4161/Auto.7.12.16991  0.01
2011 Mao K, Klionsky DJ. MAPKs regulate mitophagy in Saccharomyces cerevisiae. Autophagy. 7: 1564-5. PMID 22024747 DOI: 10.4161/Auto.7.12.17971  1
2011 Nair U, Klionsky DJ. Autophagosome biogenesis requires SNAREs Autophagy. 7: 1570-1572. PMID 22024744 DOI: 10.4161/Auto.7.12.18001  1
2011 Klionsky DJ, Baehrecke EH, Brumell JH, Chu CT, Codogno P, Cuervo AM, Debnath J, Deretic V, Elazar Z, Eskelinen EL, Finkbeiner S, Fueyo-Margareto J, Gewirtz D, Jäättelä M, Kroemer G, et al. A comprehensive glossary of autophagy-related molecules and processes (2nd edition). Autophagy. 7: 1273-94. PMID 21997368 DOI: 10.4161/Auto.7.11.17661  1
2011 Klionsky DJ. For the last time, it is GFP-Atg8, not Atg8-GFP (and the same goes for LC3) Autophagy. 7: 1093-1094. PMID 21993240 DOI: 10.4161/Auto.7.10.15492  1
2011 Nair U, Jotwani A, Geng J, Gammoh N, Richerson D, Yen WL, Griffith J, Nag S, Wang K, Moss T, Baba M, McNew JA, Jiang X, Reggiori F, Melia TJ, ... Klionsky DJ, et al. SNARE proteins are required for macroautophagy. Cell. 146: 290-302. PMID 21784249 DOI: 10.1016/J.Cell.2011.06.022  1
2011 Taylor RW, Qi JY, Talaga AK, Ma TP, Pan L, Bartholomew CR, Klionsky DJ, Moens CB, Gamse JT. Asymmetric inhibition of Ulk2 causes left-right differences in habenular neuropil formation. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 9869-78. PMID 21734278 DOI: 10.1523/Jneurosci.0435-11.2011  1
2011 Klionsky DJ, Nemchenko A. There is more to autophagy than induction: Regulating the roller coaster Autophagy. 7: 801-802. PMID 21636971 DOI: 10.4161/Auto.7.8.16609  1
2011 Mao K, Wang K, Zhao M, Xu T, Klionsky DJ. Two MAPK-signaling pathways are required for mitophagy in Saccharomyces cerevisiae. The Journal of Cell Biology. 193: 755-67. PMID 21576396 DOI: 10.1083/Jcb.201102092  1
2011 Nyfeler B, Bergman P, Triantafellow E, Wilson CJ, Zhu Y, Radetich B, Finan PM, Klionsky DJ, Murphy LO. Relieving autophagy and 4EBP1 from rapamycin resistance. Molecular and Cellular Biology. 31: 2867-76. PMID 21576371 DOI: 10.1128/Mcb.05430-11  1
2011 Mao K, Klionsky DJ. AMPK activates autophagy by phosphorylating ULK1. Circulation Research. 108: 787-8. PMID 21454792 DOI: 10.1161/Res.0B013E3182194C29  1
2011 Klionsky DJ, Meijer AJ. From the urea cycle to autophagy: Alfred J. Meijer Autophagy. 7: 805-813. PMID 21389787 DOI: 10.4161/Auto.7.8.15192  1
2011 Yuga M, Gomi K, Klionsky DJ, Shintani T. Aspartyl aminopeptidase is imported from the cytoplasm to the vacuole by selective autophagy in Saccharomyces cerevisiae. The Journal of Biological Chemistry. 286: 13704-13. PMID 21343297 DOI: 10.1074/Jbc.M110.173906  1
2011 Meijer AJ, Klionsky DJ. Vps34 is a phosphatidylinositol 3-kinase, not a phosphoinositide 3-kinase Autophagy. 7: 563-564. PMID 21278489 DOI: 10.4161/Auto.7.6.14873  1
2011 Klionsky DJ. The autophagosome is overrated! Autophagy. 7: 353-354. PMID 21258205 DOI: 10.4161/Auto.7.4.14730  1
2011 Wang K, Klionsky DJ. Mitochondria removal by autophagy Autophagy. 7: 297-300. PMID 21252623 DOI: 10.4161/Auto.7.3.14502  1
2011 Chen Y, Klionsky DJ. The regulation of autophagy - Unanswered questions Journal of Cell Science. 124: 161-170. PMID 21187343 DOI: 10.1242/Jcs.064576  1
2011 Thumm M, Klionsky DJ. New thoughts regarding Atg8 and ubiquitination Autophagy. 7: 125-126. PMID 21160277 DOI: 10.4161/Auto.7.2.14428  1
2011 Shahnazari S, Namolovan A, Klionsky DJ, Brumell JH. A role for diacylglycerol in antibacterial autophagy. Autophagy. 7: 331-3. PMID 21079417 DOI: 10.4161/Auto.7.3.14045  1
2011 Huang J, Birmingham CL, Shahnazari S, Shiu J, Zheng YT, Smith AC, Campellone KG, Heo WD, Gruenheid S, Meyer T, Welch MD, Ktistakis NT, Kim PK, Klionsky DJ, Brumell JH. Antibacterial autophagy occurs at PI(3)P-enriched domains of the endoplasmic reticulum and requires Rab1 GTPase. Autophagy. 7: 17-26. PMID 20980813 DOI: 10.4161/Auto.7.1.13840  1
2011 Backues SK, Klionsky DJ. Autophagy gets in on the regulatory act. Journal of Molecular Cell Biology. 3: 76-7. PMID 20947614 DOI: 10.1093/Jmcb/Mjq033  1
2011 Klionsky DJ. Taking the plunge Autophagy. 7: 1. DOI: 10.4161/Auto.7.1.14130  1
2011 Oreshko NI, Klionsky DM. New techniques for the processing and analysis of telemetry and trajectory information on the basis of achievements in the realm of time-frequency analysis and wavelet theory Pattern Recognition and Image Analysis. 21: 731-739. DOI: 10.1134/S1054661811040134  1
2011 Zhao M, Klionsky DJ. AMPK-dependent phosphorylation of ULK1 induces autophagy Cell Metabolism. 13: 119-120. DOI: 10.1016/J.Cmet.2011.01.009  1
2010 Klionsky DJ, Seglen PO. The Norse god of autophagy Autophagy. 6: 1017-1031. PMID 20814236 DOI: 10.4161/Auto.6.8.13092  1
2010 Yang Z, Klionsky DJ. Eaten alive: A history of macroautophagy Nature Cell Biology. 12: 814-822. PMID 20811353 DOI: 10.1038/Ncb0910-814  1
2010 Geng J, Klionsky DJ. The Golgi as a potential membrane source for autophagy Autophagy. 6: 950-951. PMID 20729630 DOI: 10.4161/Auto.6.7.13009  1
2010 Shahnazari S, Yen WL, Birmingham CL, Shiu J, Namolovan A, Zheng YT, Nakayama K, Klionsky DJ, Brumell JH. A diacylglycerol-dependent signaling pathway contributes to regulation of antibacterial autophagy. Cell Host & Microbe. 8: 137-46. PMID 20674539 DOI: 10.1016/J.Chom.2010.07.002  1
2010 Munakata N, Klionsky DJ. "Autophagy suite": Atg9 cycling in the cytoplasm to vacuole targeting pathway Autophagy. 6: 679-685. PMID 20543572 DOI: 10.4161/Auto.6.6.12396  1
2010 Brest P, Corcelle EA, Cesaro A, Chargui A, Belaïd A, Klionsky DJ, Vouret-Craviari V, Hebuterne X, Hofman P, Mograbi B. Autophagy and Crohn's disease: at the crossroads of infection, inflammation, immunity, and cancer. Current Molecular Medicine. 10: 486-502. PMID 20540703 DOI: 10.2174/156652410791608252  1
2010 He C, Klionsky DJ. Analyzing autophagy in zebrafish Autophagy. 6: 642-644. PMID 20495344 DOI: 10.4161/Auto.6.5.12092  1
2010 Kanki T, Klionsky DJ. The molecular mechanism of mitochondria autophagy in yeast: MicroReview Molecular Microbiology. 75: 795-800. PMID 20487284 DOI: 10.1111/J.1365-2958.2009.07035.X  1
2010 Klionsky DJ, Codogno P, Cuervo AM, Deretic V, Elazar Z, Fueyo-Margareto J, Gewirtz DA, Kroemer G, Levine B, Mizushima N, Rubinsztein DC, Thumm M, Tooze SA. A comprehensive glossary of autophagy-related molecules and processes. Autophagy. 6: 438-48. PMID 20484971 DOI: 10.4161/Auto.6.4.12244  1
2010 Klionsky DJ. The molecular machinery of autophagy and its role in physiology and disease Seminars in Cell and Developmental Biology. 21: 663. PMID 20430106 DOI: 10.1016/J.Semcdb.2010.04.005  1
2010 Lynch-Day MA, Bhandari D, Menon S, Huang J, Cai H, Bartholomew CR, Brumell JH, Ferro-Novick S, Klionsky DJ. Trs85 directs a Ypt1 GEF, TRAPPIII, to the phagophore to promote autophagy. Proceedings of the National Academy of Sciences of the United States of America. 107: 7811-6. PMID 20375281 DOI: 10.1073/Pnas.1000063107  1
2010 Klionsky D. Daniel Klionsky: A full plate for autophagy. Interview by Ben Short The Journal of Cell Biology. 189: 8-9. PMID 20368614 DOI: 10.1083/jcb.1891pi  1
2010 Inoue Y, Klionsky DJ. Regulation of macroautophagy in Saccharomyces cerevisiae Seminars in Cell and Developmental Biology. 21: 664-670. PMID 20359542 DOI: 10.1016/J.Semcdb.2010.03.009  1
2010 Geng J, Klionsky DJ. Determining Atg protein stoichiometry at the phagophore assembly site by fluorescence microscopy Autophagy. 6: 144-147. PMID 20131413 DOI: 10.4161/Auto.6.1.10249  1
2010 Dice JF, Klionsky DJ. Artophagy: The art of autophagy - Macroautophagy Autophagy. 6: 320-321. PMID 20118653 DOI: 10.4161/Auto.6.3.11263  1
2010 Klionsky DJ, Lane JD. Alternative macroautophagy. Autophagy. 6: 201. PMID 20083899 DOI: 10.4161/auto.6.2.11151  1
2010 Yen WL, Shintani T, Nair U, Cao Y, Richardson BC, Li Z, Hughson FM, Baba M, Klionsky DJ. The conserved oligomeric Golgi complex is involved in double-membrane vesicle formation during autophagy. The Journal of Cell Biology. 188: 101-14. PMID 20065092 DOI: 10.1083/Jcb.200904075  1
2010 Yang Z, Klionsky DJ. Mammalian autophagy: Core molecular machinery and signaling regulation Current Opinion in Cell Biology. 22: 124-131. PMID 20034776 DOI: 10.1016/J.Ceb.2009.11.014  1
2010 Thevissen K, Yen WL, Carmona-Gutierrez D, Idkowiak-Baldys J, Aerts AM, François IE, Madeo F, Klionsky DJ, Hannun YA, Cammue BP. Skn1 and Ipt1 negatively regulate autophagy in Saccharomyces cerevisiae. Fems Microbiology Letters. 303: 163-8. PMID 20030721 DOI: 10.1111/J.1574-6968.2009.01869.X  1
2010 Vellai T, Klionsky DJ. A second report from the EMBO conference on autophagy: Mechanism, regulation and selectivity of autophagy Autophagy. 6: 197-198. PMID 20026910 DOI: 10.4161/Auto.6.1.10819  1
2010 Goodsell DS, Klionsky DJ. Artophagy: The art of autophagy - The Cvt pathway Autophagy. 6: 3-6. PMID 20023390 DOI: 10.4161/Auto.6.1.10812  1
2010 Klionsky DJ. What were you thinking? Do not manipulate those data Autophagy. 6: 1007-1008. DOI: 10.4161/Auto.6.8.13698  1
2010 Klionsky DJ. An autophagy glossary Autophagy. 6: 437. DOI: 10.4161/Auto.6.4.12243  1
2010 Klionsky DJ. J. Fred "Paulo" dice: In memoriam Autophagy. 6: 319. DOI: 10.4161/Auto.6.3.11225  1
2010 Klionsky DJ. Artophagy Autophagy. 6: 1-2. DOI: 10.4161/auto.6.1.10811  1
2010 Klionsky DJ. The Autophagy Connection Developmental Cell. 19: 11-12. DOI: 10.1016/J.Devcel.2010.07.005  1
2009 Klionsky DJ. A report from the EMBO conference on autophagy Autophagy. 5: 1235-1239. PMID 19901526 DOI: 10.4161/Auto.5.8.10480  1
2009 Yang Z, Klionsky DJ. An overview of the molecular mechanism of autophagy Current Topics in Microbiology and Immunology. 335: 1-32. PMID 19802558 DOI: 10.1007/978-3-642-00302-8_1  1
2009 Kanki T, Wang K, Baba M, Bartholomew CR, Lynch-Day MA, Du Z, Geng J, Mao K, Yang Z, Yen WL, Klionsky DJ. A genomic screen for yeast mutants defective in selective mitochondria autophagy. Molecular Biology of the Cell. 20: 4730-8. PMID 19793921 DOI: 10.1091/Mbc.E09-03-0225  1
2009 Kanki T, Klionsky DJ. Atg32 is a tag for mitochondria degradation in yeast Autophagy. 5: 1201-1202. PMID 19736522 DOI: 10.4161/Auto.5.8.9747  1
2009 Klionsky DJ. Putting the upper-division cart before the introductory horse Cbe Life Sciences Education. 8: 155-156. PMID 19723806 DOI: 10.1187/Cbe.09-05-0030  1
2009 He C, Klionsky DJ. Regulation mechanisms and signaling pathways of autophagy Annual Review of Genetics. 43: 67-93. PMID 19653858 DOI: 10.1146/Annurev-Genet-102808-114910  1
2009 Kanki T, Klionsky DJ. Mitochondrial abnormalities drive cell death in Wolfram syndrome 2 Cell Research. 19: 922-923. PMID 19648948 DOI: 10.1038/Cr.2009.94  1
2009 Klionsky DJ, Dice JF. Chaperone-mediated autophagy: The heretofore untold story of J. Fred "Paulo" Dice Autophagy. 5: 1079-1084. PMID 19617700 DOI: 10.4161/Auto.5.8.9476  1
2009 Rubinsztein DC, Cuervo AM, Ravikumar B, Sarkar S, Korolchuk V, Kaushik S, Klionsky DJ. In search of an "autophagomometer". Autophagy. 5: 585-9. PMID 19411822 DOI: 10.4161/Auto.5.5.8823  1
2009 Galluzzi L, Aaronson SA, Abrams J, Alnemri ES, Andrews DW, Baehrecke EH, Bazan NG, Blagosklonny MV, Blomgren K, Borner C, Bredesen DE, Brenner C, Castedo M, Cidlowski JA, Ciechanover A, ... ... Klionsky DJ, et al. Guidelines for the use and interpretation of assays for monitoring cell death in higher eukaryotes. Cell Death and Differentiation. 16: 1093-107. PMID 19373242 DOI: 10.1038/Cdd.2009.44  1
2009 Klionsky DJ. Crohn's disease, autophagy, and the paneth cell New England Journal of Medicine. 360: 1785-1786. PMID 19369659 DOI: 10.1056/Nejmcibr0810347  1
2009 Klionsky DJ. A work in progress Autophagy. 5: 289. PMID 19242107 DOI: 10.4161/auto.5.3.8180  1
2009 He C, Bartholomew CR, Zhou W, Klionsky DJ. Assaying autophagic activity in transgenic GFP-Lc3 and GFP-Gabarap zebrafish embryos. Autophagy. 5: 520-6. PMID 19221467 DOI: 10.4161/Auto.5.4.7768  1
2009 Klionsky DJ. Autophagy in mammalian systems, Part B. Preface Methods in Enzymology. 452. PMID 19200871 DOI: 10.1016/S0076-6879(08)03631-8  1
2009 Klionsky DJ. Crohn disease and autophagy Autophagy. 5: 139. PMID 19139633 DOI: 10.4161/Auto.5.2.7677  1
2009 Xie Z, Nair U, Geng J, Szefler MB, Rothman ED, Klionsky DJ. Indirect estimation of the area density of Atg8 on the phagophore. Autophagy. 5: 217-20. PMID 19088501 DOI: 10.4161/Auto.5.2.7201  1
2009 Klionsky DJ. Looking ahead: Online protocols Autophagy. 5: 757. DOI: 10.4161/Auto.9357  1
2009 Klionsky DJ. Location, location, location? No. catalog number Autophagy. 5: 441. DOI: 10.4161/Auto.5.4.8509  1
2009 Klionsky DJ. Preface Methods in Enzymology. 451. DOI: 10.1016/S0076-6879(08)03631-8  1
2008 Noda T, Klionsky DJ. The quantitative Pho8Delta60 assay of nonspecific autophagy Methods in Enzymology. 451: 33-42. PMID 19185711 DOI: 10.1016/S0076-6879(08)03203-5  1
2008 Cheong H, Klionsky DJ. Biochemical methods to monitor autophagy-related processes in yeast Methods in Enzymology. 451: 1-26. PMID 19185709 DOI: 10.1016/S0076-6879(08)03201-1  1
2008 Klionsky DJ, Deter RL. In the autophagy trenches: The early research career of Russell L. Deter Autophagy. 4: 978-981. PMID 18971633 DOI: 10.4161/Auto.6961  1
2008 Cao Y, Klionsky DJ. New insights into autophagy using a multiple knockout strain Autophagy. 4: 1073-1075. PMID 18971623 DOI: 10.4161/Auto.6962  1
2008 Yen WL, Klionsky DJ. How to live long and prosper: Autophagy, mitochondria, and aging Physiology. 23: 248-262. PMID 18927201 DOI: 10.1152/Physiol.00013.2008  1
2008 Kanki T, Klionsky DJ. Mitophagy in yeast occurs through a selective mechanism Journal of Biological Chemistry. 283: 32386-32393. PMID 18818209 DOI: 10.1074/Jbc.M802403200  1
2008 Klionsky DJ. The quiz factor Cbe Life Sciences Education. 7: 265-266. PMID 18765744 DOI: 10.1187/Cbe.08-02-0009  1
2008 Klionsky DJ, Elazar Z, Seglen PO, Rubinsztein DC. Does bafilomycin A1 block the fusion of autophagosomes with lysosomes? Autophagy. 4: 849-50. PMID 18758232 DOI: 10.4161/Auto.6845  1
2008 Geng J, Klionsky DJ. Quantitative regulation of vesicle formation in yeast nonspecific autophagy Autophagy. 4: 955-957. PMID 18758231 DOI: 10.4161/Auto.6791  1
2008 Geng J, Klionsky DJ. The Atg8 and Atg12 ubiquitin-like conjugation systems in macroautophagy. 'Protein Modifications: Beyond the Usual Suspects' Review Series Embo Reports. 9: 859-864. PMID 18704115 DOI: 10.1038/Embor.2008.163  1
2008 Klionsky DJ. Autophagy revisited: A conversation with Christian de Duve Autophagy. 4: 740-743. PMID 18567941 DOI: 10.4161/Auto.6398  1
2008 Klionsky DJ. How we do business (or, why does it take other journals so long to review your paper?) Autophagy. 4: 551-554. PMID 18552552 DOI: 10.4161/Auto.6376  1
2008 Cheong H, Klionsky DJ. Dual role of Atg1 in regulation of autophagy-specific PAS assembly in Saccharomyces cerevisiae Autophagy. 4: 724-726. PMID 18552550 DOI: 10.4161/Auto.6375  1
2008 Deretic V, Klionsky DJ. How cells clean house. Scientific American. 298: 74-81. PMID 18444328 DOI: 10.1038/Scientificamerican0508-74  1
2008 Legakis JE, Klionsky DJ. Analysis of autophagosome membrane cycling by fluorescence microscopy. Methods in Molecular Biology (Clifton, N.J.). 445: 135-45. PMID 18425448 DOI: 10.1007/978-1-59745-157-4_9  1
2008 Monastyrska I, He C, Geng J, Hoppe AD, Li Z, Klionsky DJ. Arp2 links autophagic machinery with the actin cytoskeleton. Molecular Biology of the Cell. 19: 1962-75. PMID 18287533 DOI: 10.1091/Mbc.E07-09-0892  1
2008 Klionsky DJ, Abeliovich H, Agostinis P, Agrawal DK, Aliev G, Askew DS, Baba M, Baehrecke EH, Bahr BA, Ballabio A, Bamber BA, Bassham DC, Bergamini E, Bi X, Biard-Piechaczyk M, et al. Guidelines for the use and interpretation of assays for monitoring autophagy in higher eukaryotes. Autophagy. 4: 151-75. PMID 18188003 DOI: 10.4161/Auto.5338  1
2008 Klionsky DJ. Getting into the flow Autophagy. 4: 139-140. PMID 18188002 DOI: 10.4161/Auto.5475  1
2008 Klionsky DJ. Achieve fame and (save your lab a) fortune! Autophagy. 4: 977. DOI: 10.4161/Auto.7137  1
2008 Klionsky DJ. A reagent forum Autophagy. 4: 739. DOI: 10.4161/Auto.6635  1
2008 Legakis JE, Klionsky DJ. Analysis of autophagosome membrane cycling by fluorescence microscopy Methods in Molecular Biology. 445: 135-145. DOI: 10.1007/978-1-59745-157-4_9  1
2007 Klionsky DJ. Monitoring autophagy in yeast: The Pho8Δ60 assay Methods in Molecular Biology. 390: 363-371. PMID 17951700 DOI: 10.1007/978-1-59745-466-7_24  1
2007 Xie Z, Klionsky DJ. Autophagosome formation: Core machinery and adaptations Nature Cell Biology. 9: 1102-1109. PMID 17909521 DOI: 10.1038/Ncb1007-1102  1
2007 Cao Y, Klionsky DJ. Physiological functions of Atg6/Beclin 1: A unique autophagy-related protein Cell Research. 17: 839-849. PMID 17893711 DOI: 10.1038/Cr.2007.78  1
2007 Klionsky DJ. Autophagy: From phenomenology to molecular understanding in less than a decade Nature Reviews Molecular Cell Biology. 8: 931-937. PMID 17712358 DOI: 10.1038/Nrm2245  1
2007 Yorimitsu T, Zaman S, Broach JR, Klionsky DJ. Protein kinase A and Sch9 cooperatively regulate induction of autophagy in Saccharomyces cerevisiae. Molecular Biology of the Cell. 18: 4180-9. PMID 17699586 DOI: 10.1091/Mbc.E07-05-0485  1
2007 Huang J, Klionsky DJ. Autophagy and human disease Cell Cycle. 6: 1837-1849. PMID 17671424 DOI: 10.4161/Cc.6.15.4511  1
2007 Yorimitsu T, Klionsky DJ. Eating the endoplasmic reticulum: quality control by autophagy Trends in Cell Biology. 17: 279-285. PMID 17481899 DOI: 10.1016/J.Tcb.2007.04.005  1
2007 Legakis JE, Yen WL, Klionsky DJ. A cycling protein complex required for selective autophagy. Autophagy. 3: 422-32. PMID 17426440 DOI: 10.4161/Auto.4129  1
2007 Rubinsztein DC, Gestwicki JE, Murphy LO, Klionsky DJ. Potential therapeutic applications of autophagy. Nature Reviews. Drug Discovery. 6: 304-12. PMID 17396135 DOI: 10.1038/Nrd2272  1
2007 He C, Klionsky DJ. Atg9 trafficking in autophagy-related pathways Autophagy. 3: 271-274. PMID 17329962 DOI: 10.4161/Auto.3912  1
2007 Mizushima N, Klionsky DJ. Protein turnover via autophagy: Implications for metabolism Annual Review of Nutrition. 27: 19-40. PMID 17311494 DOI: 10.1146/Annurev.Nutr.27.061406.093749  1
2007 Yen WL, Klionsky DJ. Atg27 is a second transmembrane cycling protein Autophagy. 3: 254-256. PMID 17297289 DOI: 10.4161/Auto.3823  1
2007 Yorimitsu T, Klionsky DJ. Endoplasmic reticulum stress: A new pathway to induce aytophagy Autophagy. 3: 160-162. PMID 17204854 DOI: 10.4161/Auto.3653  1
2007 Yang Z, Klionsky DJ. Permeases recycle amino acids resulting from autophagy Autophagy. 3: 149-150. PMID 17204852 DOI: 10.4161/Auto.3631  1
2007 Klionsky DJ. The importance of diversity Autophagy. 3: 83-84. PMID 17204843 DOI: 10.4161/Auto.3709  1
2007 Tal R, Winter G, Ecker N, Klionsky DJ, Abeliovich H. Aup1p, a yeast mitochondrial protein phosphatase homolog, is required for efficient stationary phase mitophagy and cell survival. The Journal of Biological Chemistry. 282: 5617-24. PMID 17166847 DOI: 10.1074/Jbc.M605940200  1
2007 Yen WL, Legakis JE, Nair U, Klionsky DJ. Atg27 is required for autophagy-dependent cycling of Atg9. Molecular Biology of the Cell. 18: 581-93. PMID 17135291 DOI: 10.1091/Mbc.E06-07-0612  1
2007 Cao Y, Klionsky DJ. Atg26 is not involved in autophagy-related pathways in Saccharomyces cerevisiae Autophagy. 3: 17-20. PMID 17012830 DOI: 10.4161/Auto.3371  1
2007 Klionsky DJ. Forward to the past Autophagy. 3: 541. DOI: 10.4161/Auto.5072  1
2007 Klionsky DJ. Looking back on two years of Autophagy Autophagy. 3: 1-3. DOI: 10.4161/Auto.3413  1
2006 He C, Song H, Yorimitsu T, Monastyrska I, Yen WL, Legakis JE, Klionsky DJ. Recruitment of Atg9 to the preautophagosomal structure by Atg11 is essential for selective autophagy in budding yeast. The Journal of Cell Biology. 175: 925-35. PMID 17178909 DOI: 10.1083/Jcb.200606084  1
2006 He C, Klionsky DJ. Autophagy and neurodegeneration Acs Chemical Biology. 1: 211-213. PMID 17163674 DOI: 10.1021/Cb600182H  1
2006 Monastyrska I, Klionsky DJ. Autophagy in organelle homeostasis: Peroxisome turnover Molecular Aspects of Medicine. 27: 483-494. PMID 16973210 DOI: 10.1016/J.Mam.2006.08.004  1
2006 Klionsky DJ. Let's not forget about non-specific autophagy Autophagy. 2: 257. PMID 16880729 DOI: 10.4161/Auto.3199  1
2006 Monastyrska I, Shintani T, Klionsky DJ, Reggiori F. Atg11 directs autophagosome cargoes to the PAS along actin cables. Autophagy. 2: 119-21. PMID 16874092 DOI: 10.4161/Auto.2.2.2298  1
2006 Klionsky DJ. What can we learn from trypanosomes? Autophagy. 2: 63-64. PMID 16874079 DOI: 10.4161/Auto.2.2.2418  1
2006 Klionsky DJ, Kumar A. A systems biology approach to learning autophagy. Autophagy. 2: 12-23. PMID 16874048 DOI: 10.4161/Auto.2227  1
2006 Reggiori F, Klionsky DJ. Atg9 sorting from mitochondria is impaired in early secretion and VFT-complex mutants in Saccharomyces cerevisiae Journal of Cell Science. 119: 2903-2911. PMID 16787937 DOI: 10.1242/Jcs.03047  1
2006 Klionsky DJ. Good riddance to bad rubbish Nature. 441: 819-820. PMID 16778876 DOI: 10.1038/441819A  1
2006 Klionsky DJ. How selective is autophagy? Autophagy. 2: 151-152. DOI: 10.4161/Auto.2785  1
2006 Legakis JE, Klionsky DJ. Overview of Autophagy Autophagy in Immunity and Infection: a Novel Immune Effector. 1-17. DOI: 10.1002/352760880X.ch1  1
2006 Klionsky DJ. Learning about autophagy Autophagy. 2: 1.  1
2005 Towns R, Kabeya Y, Yoshimori T, Guo C, Shangguan Y, Hong S, Kaplan M, Klionsky DJ, Wiley JW. Sera from patients with type 2 diabetes and neuropathy induce autophagy and colocalization with mitochondria in SY5Y cells. Autophagy. 1: 163-70. PMID 16874076 DOI: 10.4161/Auto.1.3.2068  0.12
2005 Reggiori F, Shintani T, Nair U, Klionsky DJ. Atg9 cycles between mitochondria and the pre-autophagosomal structure in yeasts. Autophagy. 1: 101-9. PMID 16874040 DOI: 10.4161/Auto.1.2.1840  1
2005 Klionsky DJ. The correct way to monitor autophagy in higher eukaryotes Autophagy. 1: 65. PMID 16874029 DOI: 10.4161/Auto.1.2.1899  1
2005 Yorimitsu T, Klionsky DJ. Autophagy: Molecular machinery for self-eating Cell Death and Differentiation. 12: 1542-1552. PMID 16247502 DOI: 10.1038/Sj.Cdd.4401765  1
2005 Nair U, Klionsky DJ. Molecular mechanisms and regulation of specific and nonspecific autophagy pathways in yeast Journal of Biological Chemistry. 280: 41785-41788. PMID 16230342 DOI: 10.1074/Jbc.R500016200  1
2005 Reggiori F, Monastyrska I, Shintani T, Klionsky DJ. The actin cytoskeleton is required for selective types of autophagy, but not nonspecific autophagy, in the yeast Saccharomyces cerevisiae. Molecular Biology of the Cell. 16: 5843-56. PMID 16221887 DOI: 10.1091/Mbc.E05-07-0629  1
2005 Reggiori F, Klionsky DJ. Autophagosomes: Biogenesis from scratch? Current Opinion in Cell Biology. 17: 415-422. PMID 15978794 DOI: 10.1016/J.Ceb.2005.06.007  1
2005 Cheong H, Yorimitsu T, Reggiori F, Legakis JE, Wang CW, Klionsky DJ. Atg17 regulates the magnitude of the autophagic response. Molecular Biology of the Cell. 16: 3438-53. PMID 15901835 DOI: 10.1091/Mbc.E04-10-0894  1
2005 Yorimitsu T, Klionsky DJ. Atg11 links cargo to the vesicle-forming machinery in the cytoplasm to vacuole targeting pathway Molecular Biology of the Cell. 16: 1593-1605. PMID 15659643 DOI: 10.1091/Mbc.E04-11-1035  1
2005 Klionsky DJ. The molecular machinery of autophagy: Unanswered questions Journal of Cell Science. 118: 7-18. PMID 15615779 DOI: 10.1242/Jcs.01620  1
2004 Lodish HF, Rodriguez RK, Klionsky DJ. Points of view: lectures: can't learn with them, can't learn without them Cell Biology Education [Electronic Resource]. 3: 202-211. PMID 15592591 DOI: 10.1187/Cbe.04-07-0055  1
2004 Shintani T, Klionsky DJ. Autophagy in health and disease: a double-edged sword. Science (New York, N.Y.). 306: 990-5. PMID 15528435 DOI: 10.1126/Science.1099993  1
2004 Klionsky DJ. Regulated self-cannibalism Nature. 430: 31-32. PMID 15343317 DOI: 10.1038/431031A  1
2004 Strømhaug PE, Reggiori F, Guan J, Wang CW, Klionsky DJ. Atg21 is a phosphoinositide binding protein required for efficient lipidation and localization of Atg8 during uptake of aminopeptidase I by selective autophagy. Molecular Biology of the Cell. 15: 3553-66. PMID 15155809 DOI: 10.1091/Mbc.E04-02-0147  1
2004 Shintani T, Klionsky DJ. Cargo proteins facilitate the formation of transport vesicles in the cytoplasm to vacuole targeting pathway. The Journal of Biological Chemistry. 279: 29889-94. PMID 15138258 DOI: 10.1074/Jbc.M404399200  1
2004 Levine B, Klionsky DJ. Development by self-digestion: Molecular mechanisms and biological functions of autophagy Developmental Cell. 6: 463-477. PMID 15068787 DOI: 10.1016/S1534-5807(04)00099-1  1
2004 Budovskaya YV, Stephan JS, Reggiori F, Klionsky DJ, Herman PK. The Ras/cAMP-dependent protein kinase signaling pathway regulates an early step of the autophagy process in Saccharomyces cerevisiae. The Journal of Biological Chemistry. 279: 20663-71. PMID 15016820 DOI: 10.1074/Jbc.M400272200  1
2004 Reggiori F, Wang CW, Nair U, Shintani T, Abeliovich H, Klionsky DJ. Early stages of the secretory pathway, but not endosomes, are required for Cvt vesicle and autophagosome assembly in Saccharomyces cerevisiae. Molecular Biology of the Cell. 15: 2189-204. PMID 15004240 DOI: 10.1091/Mbc.E03-07-0479  1
2004 Reggiori F, Tucker KA, Stromhaug PE, Klionsky DJ. The Atg1-Atg13 complex regulates Atg9 and Atg23 retrieval transport from the pre-autophagosomal structure. Developmental Cell. 6: 79-90. PMID 14723849 DOI: 10.1016/S1534-5807(03)00402-7  1
2004 Klionsky DJ. Talking biology: Learning outside the book - And the lecture Cell Biology Education. 3: 204-211. DOI: 10.1187/Cbe.04-07-0055  1
2003 Wang CW, Stromhaug PE, Kauffman EJ, Weisman LS, Klionsky DJ. Yeast homotypic vacuole fusion requires the Ccz1-Mon1 complex during the tethering/docking stage. The Journal of Cell Biology. 163: 973-85. PMID 14662743 DOI: 10.1083/Jcb.200308071  1
2003 Klionsky DJ, Cregg JM, Dunn WA, Emr SD, Sakai Y, Sandoval IV, Sibirny A, Subramani S, Thumm M, Veenhuis M, Ohsumi Y. A unified nomenclature for yeast autophagy-related genes. Developmental Cell. 5: 539-45. PMID 14536056 DOI: 10.1016/S1534-5807(03)00296-X  1
2003 Wang CW, Klionsky DJ. The molecular mechanism of autophagy. Molecular Medicine (Cambridge, Mass.). 9: 65-76. PMID 12865942 DOI: 10.1007/Bf03402040  1
2003 Abeliovich H, Zhang C, Dunn WA, Shokat KM, Klionsky DJ. Chemical genetic analysis of Apg1 reveals a non-kinase role in the induction of autophagy. Molecular Biology of the Cell. 14: 477-90. PMID 12589048 DOI: 10.1091/Mbc.E02-07-0413  1
2003 Reggiori F, Wang CW, Stromhaug PE, Shintani T, Klionsky DJ. Vps51 is part of the yeast Vps fifty-three tethering complex essential for retrograde traffic from the early endosome and Cvt vesicle completion. The Journal of Biological Chemistry. 278: 5009-20. PMID 12446664 DOI: 10.1074/Jbc.M210436200  1
2002 Huang WP, Klionsky DJ. Autophagy in yeast: A review of the molecular machinery Cell Structure and Function. 27: 409-420. PMID 12576634 DOI: 10.1247/Csf.27.409  1
2002 Shintani T, Huang WP, Stromhaug PE, Klionsky DJ. Mechanism of cargo selection in the cytoplasm to vacuole targeting pathway. Developmental Cell. 3: 825-37. PMID 12479808 DOI: 10.1016/S1534-5807(02)00373-8  1
2002 Reggiori F, Klionsky DJ. Autophagy in the eukaryotic cell Eukaryotic Cell. 1: 11-21. PMID 12455967 DOI: 10.1128/Ec.01.1.11-21.2002  1
2002 Khalfan WA, Klionsky DJ. Molecular machinery required for autophagy and the cytoplasm to vacuole targeting (Cvt) pathway in S. cerevisiae. Current Opinion in Cell Biology. 14: 468-75. PMID 12383798 DOI: 10.1016/S0955-0674(02)00343-5  1
2002 Wang CW, Stromhaug PE, Shima J, Klionsky DJ. The Ccz1-Mon1 protein complex is required for the late step of multiple vacuole delivery pathways. The Journal of Biological Chemistry. 277: 47917-27. PMID 12364329 DOI: 10.1074/Jbc.M208191200  1
2002 Nice DC, Sato TK, Stromhaug PE, Emr SD, Klionsky DJ. Cooperative binding of the cytoplasm to vacuole targeting pathway proteins, Cvt13 and Cvt20, to phosphatidylinositol 3-phosphate at the pre-autophagosomal structure is required for selective autophagy. The Journal of Biological Chemistry. 277: 30198-207. PMID 12048214 DOI: 10.1074/Jbc.M204736200  1
2002 Kim J, Huang WP, Stromhaug PE, Klionsky DJ. Convergence of multiple autophagy and cytoplasm to vacuole targeting components to a perivacuolar membrane compartment prior to de Novo vesicle formation Journal of Biological Chemistry. 277: 763-773. PMID 11675395 DOI: 10.1074/Jbc.M109134200  1
2001 Guan J, Stromhaug PE, George MD, Habibzadegah-Tari P, Bevan A, Dunn WA, Klionsky DJ. Cvt18/Gsa12 is required for cytoplasm-to-vacuole transport, pexophagy, and autophagy in Saccharomyces cerevisiae and Pichia pastoris. Molecular Biology of the Cell. 12: 3821-38. PMID 11739783 DOI: 10.1091/Mbc.12.12.3821  1
2001 Abeliovich H, Klionsky DJ. Autophagy in yeast: Mechanistic insights and physiological function Microbiology and Molecular Biology Reviews. 65: 463-479. PMID 11528006 DOI: 10.1128/Mmbr.65.3.463-479.2001  1
2001 Stromhaug PE, Klionsky DJ. Approaching the molecular mechanism of autophagy Traffic. 2: 524-531. PMID 11489210 DOI: 10.1034/J.1600-0854.2001.20802.X  1
2001 Scott SV, Guan J, Hutchins MU, Kim J, Klionsky DJ. Cvt19 is a receptor for the cytoplasm-to-vacuole targeting pathway. Molecular Cell. 7: 1131-41. PMID 11430817 DOI: 10.1016/S1097-2765(01)00263-5  1
2001 Wang CW, Kim J, Huang WP, Abeliovich H, Stromhaug PE, Dunn WA, Klionsky DJ. Apg2 is a novel protein required for the cytoplasm to vacuole targeting, autophagy, and pexophagy pathways. The Journal of Biological Chemistry. 276: 30442-51. PMID 11382760 DOI: 10.1074/Jbc.M102342200  1
2001 Kim J, Kamada Y, Stromhaug PE, Guan J, Hefner-Gravink A, Baba M, Scott SV, Ohsumi Y, Dunn WA, Klionsky DJ. Cvt9/Gsa9 functions in sequestering selective cytosolic cargo destined for the vacuole. The Journal of Cell Biology. 153: 381-96. PMID 11309418 DOI: 10.1083/Jcb.153.2.381  1
2001 Hutchins MU, Klionsky DJ. Vacuolar localization of oligomeric alpha-mannosidase requires the cytoplasm to vacuole targeting and autophagy pathway components in Saccharomyces cerevisiae. The Journal of Biological Chemistry. 276: 20491-8. PMID 11264288 DOI: 10.1074/Jbc.M101150200  1
2001 Kim J, Huang WP, Klionsky DJ. Membrane recruitment of Aut7p in the autophagy and cytoplasm to vacuole targeting pathways requires Aut1p, Aut2p, and the autophagy conjugation complex Journal of Cell Biology. 152: 51-64. PMID 11149920 DOI: 10.1083/Jcb.152.1.51  1
2001 Teter SA, Eggerton KP, Scott SV, Kim J, Fischer AM, Klionsky DJ. Degradation of lipid vesicles in the yeast vacuole requires function of Cvt17, a putative lipase. The Journal of Biological Chemistry. 276: 2083-7. PMID 11085977 DOI: 10.1074/Jbc.C000739200  1
2000 Klionsky DJ, Emr SD. Autophagy as a regulated pathway of cellular degradation. Science (New York, N.Y.). 290: 1717-21. PMID 11099404 DOI: 10.1126/Science.290.5497.1717  1
2000 Abeliovich H, Dunn WA, Kim J, Klionsky DJ. Dissection of autophagosome biogenesis into distinct nucleation and expansion steps Journal of Cell Biology. 151: 1025-1033. PMID 11086004 DOI: 10.1083/Jcb.151.5.1025  1
2000 Kim J, Klionsky DJ. Autophagy, cytoplasm-to-vacuole targeting pathway, and pexophagy in yeast and mammalian cells Annual Review of Biochemistry. 69: 303-342. PMID 10966461 DOI: 10.1146/Annurev.Biochem.69.1.303  1
2000 Teter SA, Klionsky DJ. Transport of proteins to the yeast vacuole: Autophagy, cytoplasm-to-vacuole targeting, and role of the vacuole in degradation Seminars in Cell and Developmental Biology. 11: 173-179. PMID 10906274 DOI: 10.1006/Scdb.2000.0163  1
2000 Scott SV, Nice DC, Nau JJ, Weisman LS, Kamada Y, Keizer-Gunnink I, Funakoshi T, Veenhuis M, Ohsumi Y, Klionsky DJ. Apg13p and Vac8p are part of a complex of phosphoproteins that are required for cytoplasm to vacuole targeting. The Journal of Biological Chemistry. 275: 25840-9. PMID 10837477 DOI: 10.1074/Jbc.M002813200  1
2000 Kim J, Scott SV, Klionsky DJ. Alternative protein sorting pathways International Review of Cytology. 198: 153-201. PMID 10804463 DOI: 10.1016/S0074-7696(00)98005-7  1
2000 George MD, Baba M, Scott SV, Mizushima N, Garrison BS, Ohsumi Y, Klionsky DJ. Apg5p functions in the sequestration step in the cytoplasm-to-vacuole targeting and macroautophagy pathways. Molecular Biology of the Cell. 11: 969-82. PMID 10712513 DOI: 10.1091/Mbc.11.3.969  1
2000 Huang WP, Scott SV, Kim J, Klionsky DJ. The itinerary of a vesicle component, Aut7p/Cvt5p, terminates in the yeast vacuole via the autophagy/Cvt pathways Journal of Biological Chemistry. 275: 5845-5851. PMID 10681575 DOI: 10.1074/Jbc.275.8.5845  1
2000 Noda T, Kim J, Huang WP, Baba M, Tokunaga C, Ohsumi Y, Klionsky DJ. Apg9p/Cvt7p is an integral membrane protein required for transport vesicle formation in the Cvt and autophagy pathways Journal of Cell Biology. 148: 465-479. PMID 10662773 DOI: 10.1083/Jcb.148.3.465  1
1999 Klionsky DJ, Ohsumi Y. Vacuolar import of proteins and organelles from the cytoplasm Annual Review of Cell and Developmental Biology. 15: 1-32. PMID 10611955 DOI: 10.1146/Annurev.Cellbio.15.1.1  1
1999 Hutchins MU, Veenhuis M, Klionsky DJ. Peroxisome degradation in Saccharomyces cerevisiae is dependent on machinery of macroautophagy and the Cvt pathway. Journal of Cell Science. 112: 4079-87. PMID 10547367  1
1999 Teter SA, Klionsky DJ. How to get a folded protein across a membrane Trends in Cell Biology. 9: 428-431. PMID 10511706 DOI: 10.1016/S0962-8924(99)01652-9  1
1999 Kim J, Dalton VM, Eggerton KP, Scott SV, Klionsky DJ. Apg7p/Cvt2p is required for the cytoplasm-to-vacuole targeting, macroautophagy, and peroxisome degradation pathways Molecular Biology of the Cell. 10: 1337-1351. PMID 10233148 DOI: 10.1091/Mbc.10.5.1337  1
1999 Klionsky DJ, Tomashek JJ. An interactive exercise to learn eukaryotic cell structure & organelle function American Biology Teacher. 61: 539-542. DOI: 10.2307/4450758  1
1998 Scott SV, Klionsky DJ. Delivery of proteins and organelles to the vacuole from the cytoplasm Current Opinion in Cell Biology. 10: 523-529. PMID 9719874 DOI: 10.1016/S0955-0674(98)80068-9  1
1998 Klionsky DJ. Nonclassical protein sorting to the yeast vacuole Journal of Biological Chemistry. 273: 10807-10810. PMID 9556549 DOI: 10.1074/Jbc.273.18.10807  1
1997 Matoba S, Morano KA, Klionsky DJ, Kim K, Ogrydziak DM. Dipeptidyl aminopeptidase processing and biosynthesis of alkaline extracellular protease from Yarrowia lipolytica Microbiology. 143: 3263-3272. PMID 9353927 DOI: 10.1099/00221287-143-10-3263  1
1997 Tomashek JJ, Graham LA, Hutchins MU, Stevens TH, Klionsky DJ. V1-situated stalk subunits of the yeast vacuolar proton-translocating ATPase. The Journal of Biological Chemistry. 272: 26787-93. PMID 9334266 DOI: 10.1074/Jbc.272.42.26787  1
1997 Tomashek JJ, Garrison BS, Klionsky DJ. Reconstitution in vitro of the V1 complex from the yeast vacuolar proton-translocating ATPase. Assembly recapitulates mechanism. The Journal of Biological Chemistry. 272: 16618-23. PMID 9195975 DOI: 10.1074/Jbc.272.26.16618  1
1997 Kim J, Scott SV, Oda MN, Klionsky DJ. Transport of a large oligomeric protein by the cytoplasm to vacuole protein targeting pathway Journal of Cell Biology. 137: 609-618. PMID 9151668 DOI: 10.1083/Jcb.137.3.609  1
1997 Klionsky DJ. Protein transport from the cytoplasm into the vacuole Journal of Membrane Biology. 157: 105-115. PMID 9151652 DOI: 10.1007/S002329900220  1
1996 Nelson N, Klionsky DJ. Vacuolar H+-ATPase: From mammals to yeast and back Experientia. 52: 1101-1110. PMID 8988252 DOI: 10.1007/Bf01952108  1
1996 Scott SV, Hefner-Gravink A, Morano KA, Noda T, Ohsumi Y, Klionsky DJ. Cytoplasm-to-vacuole targeting and autophagy employ the same machinery to deliver proteins to the yeast vacuole Proceedings of the National Academy of Sciences of the United States of America. 93: 12304-12308. PMID 8901576 DOI: 10.1073/Pnas.93.22.12304  1
1996 Wang YX, Zhao H, Harding TM, Gomes de Mesquita DS, Woldringh CL, Klionsky DJ, Munn AL, Weisman LS. Multiple classes of yeast mutants are defective in vacuole partitioning yet target vacuole proteins correctly. Molecular Biology of the Cell. 7: 1375-89. PMID 8885233 DOI: 10.1091/Mbc.7.9.1375  1
1996 Alizadeh P, Klionsky DJ. Purification and biochemical characterization of the ATH1 gene product, vacuolar acid trehalase, from Saccharomyces cerevisiae. Febs Letters. 391: 273-8. PMID 8764988 DOI: 10.1016/0014-5793(96)00751-X  1
1996 Harding TM, Hefner-Gravink A, Thumm M, Klionsky DJ. Genetic and phenotypic overlap between autophagy and the cytoplasm to vacuole protein targeting pathway Journal of Biological Chemistry. 271: 17621-17624. PMID 8663607 DOI: 10.1074/Jbc.271.30.17621  1
1996 Kim J, Alizadeh P, Harding T, Hefner-Gravink A, Klionsky DJ. Disruption of the yeast ATH1 gene confers better survival after dehydration, freezing, and ethanol shock: Potential commercial applications Applied and Environmental Microbiology. 62: 1563-1569. PMID 8633854 DOI: 10.1128/Aem.62.5.1563-1569.1996  1
1996 Tomashek JJ, Sonnenburg JL, Artimovich JM, Klionsky DJ. Resolution of subunit interactions and cytoplasmic subcomplexes of the yeast vacuolar proton-translocating ATPase Journal of Biological Chemistry. 271: 10397-10404. PMID 8626613 DOI: 10.1074/Jbc.271.17.10397  1
1995 Scott SV, Klionsky DJ. In vitro reconstitution of cytoplasm to vacuole protein targeting in yeast Journal of Cell Biology. 131: 1727-1735. PMID 8557740 DOI: 10.1083/Jcb.131.6.1727  1
1995 Harding TM, Morano KA, Scott SV, Klionsky DJ. Isolation and characterization of yeast mutants in the cytoplasm to vacuole protein targeting pathway Journal of Cell Biology. 131: 591-602. PMID 7593182 DOI: 10.1083/Jcb.131.3.591  1
1994 Morano KA, Klionsky DJ. Differential effects of compartment deacidification on the targeting of membrane and soluble proteins to the vacuole in yeast Journal of Cell Science. 107: 2813-2824. PMID 7876349  1
1992 Klionsky DJ, Nelson H, Nelson N. Compartment acidification is required for efficient sorting of proteins to the vacuole in Saccharomyces cerevisiae Journal of Biological Chemistry. 267: 3416-3422. PMID 1531340  1
1992 Klionsky DJ, Cueva R, Yaver DS. Aminopeptidase I of Saccharomyces cerevisiae is localized to the vacuole independent of the secretory pathway Journal of Cell Biology. 119: 287-299. PMID 1400574 DOI: 10.1083/Jcb.119.2.287  1
1990 Klionsky DJ, Herman PK, Emr SD. The fungal vacuole: Composition, function, and biogenesis Microbiological Reviews. 54: 266-292. PMID 2215422 DOI: 10.1128/Mmbr.54.3.266-292.1990  1
1990 Klionsky DJ, Emr SD. A new class of lysosomal/vacuolar protein sorting signals Journal of Biological Chemistry. 265: 5349-5352. PMID 2180925  1
1988 Klionsky DJ, Banta LM, Emr SD. Intracellular sorting and processing of a yeast vacuolar hydrolase: proteinase A propeptide contains vacuolar targeting information Molecular and Cellular Biology. 8: 2105-2116. PMID 3290649 DOI: 10.1128/Mcb.8.5.2105  1
1988 Robinson JS, Klionsky DJ, Banta LM, Emr SD. Protein sorting in Saccharomyces cerevisiae: Isolation of mutants defective in the delivery and processing of multiple vacuolar hydrolases Molecular and Cellular Biology. 8: 4936-4948. PMID 3062374 DOI: 10.1128/Mcb.8.11.4936  1
1988 Banta LM, Robinson JS, Klionsky DJ, Emr SD. Organelle assembly in yeast: characterization of yeast mutants defective in vacuolar biogenesis and protein sorting Journal of Cell Biology. 107: 1369-1383. PMID 3049619 DOI: 10.1083/Jcb.107.4.1369  1
1987 Bedwell DM, Klionsky DJ, Emr SD. The yeast F1-ATPase beta subunit precursor contains functionally redundant mitochondrial protein import information Molecular and Cellular Biology. 7: 4038-4047. PMID 2893254 DOI: 10.1128/Mcb.7.11.4038  1
1986 Klionsky DJ, Skalnik DG, Simoni RD. Differential translation of the genes encoding the protontranslocating ATPase of Escherichia coli Journal of Biological Chemistry. 261: 8096-8099. PMID 2873137  1
1985 Aris JP, Klionsky DJ, Simoni RD. The F0 subunits of the Escherichia coli F1F0-ATP synthase are sufficient to form a functional proton pore Journal of Biological Chemistry. 260: 11207-11215. PMID 2863271  1
1985 Klionsky DJ, Simoni RD. Assembly of a functional F1 of the proton-translocating ATPase of Escherichia coli Journal of Biological Chemistry. 260: 11200-11206. PMID 2863270  1
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