Peter J. Turnbaugh, Ph.D. - Publications

2009 Washington University, Saint Louis, St. Louis, MO 
Microbiology Biology, Ecology Biology, Genetics

86 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Nayak RR, Alexander M, Deshpande I, Stapleton-Gray K, Rimal B, Patterson AD, Ubeda C, Scher JU, Turnbaugh PJ. Methotrexate impacts conserved pathways in diverse human gut bacteria leading to decreased host immune activation. Cell Host & Microbe. PMID 33440172 DOI: 10.1016/j.chom.2020.12.008  1
2020 Zou L, Spanogiannopoulos P, Pieper LM, Chien HC, Cai W, Khuri N, Pottel J, Vora B, Ni Z, Tsakalozou E, Zhang W, Shoichet BK, Giacomini KM, Turnbaugh PJ. Bacterial metabolism rescues the inhibition of intestinal drug absorption by food and drug additives. Proceedings of the National Academy of Sciences of the United States of America. PMID 32571913 DOI: 10.1073/Pnas.1920483117  1
2020 Ang QY, Alexander M, Newman JC, Tian Y, Cai J, Upadhyay V, Turnbaugh JA, Verdin E, Hall KD, Leibel RL, Ravussin E, Rosenbaum M, Patterson AD, Turnbaugh PJ. Ketogenic Diets Alter the Gut Microbiome Resulting in Decreased Intestinal Th17 Cells. Cell. PMID 32437658 DOI: 10.1016/J.Cell.2020.04.027  1
2020 Bisanz JE, Soto-Perez P, Noecker C, Aksenov AA, Lam KN, Kenney GE, Bess EN, Haiser HJ, Kyaw TS, Yu FB, Rekdal VM, Ha CWY, Devkota S, Balskus EP, Dorrestein PC, ... ... Turnbaugh PJ, et al. A Genomic Toolkit for the Mechanistic Dissection of Intractable Human Gut Bacteria. Cell Host & Microbe. PMID 32348781 DOI: 10.1016/J.Chom.2020.04.006  1
2020 Basolo A, Hohenadel M, Ang QY, Piaggi P, Heinitz S, Walter M, Walter P, Parrington S, Trinidad DD, von Schwartzenberg RJ, Turnbaugh PJ, Krakoff J. Effects of underfeeding and oral vancomycin on gut microbiome and nutrient absorption in humans. Nature Medicine. PMID 32235930 DOI: 10.1038/S41591-020-0801-Z  1
2020 Scher JU, Nayak RR, Ubeda C, Turnbaugh PJ, Abramson SB. Pharmacomicrobiomics in inflammatory arthritis: gut microbiome as modulator of therapeutic response. Nature Reviews. Rheumatology. PMID 32157196 DOI: 10.1038/S41584-020-0395-3  1
2020 Maini Rekdal V, Nol Bernadino P, Luescher MU, Kiamehr S, Le C, Bisanz JE, Turnbaugh PJ, Bess EN, Balskus EP. A widely distributed metalloenzyme class enables gut microbial metabolism of host- and diet-derived catechols. Elife. 9. PMID 32067637 DOI: 10.7554/Elife.50845  1
2019 Bess EN, Bisanz JE, Yarza F, Bustion A, Rich BE, Li X, Kitamura S, Waligurski E, Ang QY, Alba DL, Spanogiannopoulos P, Nayfach S, Koliwad SK, Wolan DW, Franke AA, ... Turnbaugh PJ, et al. Genetic basis for the cooperative bioactivation of plant lignans by Eggerthella lenta and other human gut bacteria. Nature Microbiology. PMID 31686027 DOI: 10.1038/S41564-019-0596-1  1
2019 Reese AT, Kartzinel TR, Petrone BL, Turnbaugh PJ, Pringle RM, David LA. Using DNA Metabarcoding To Evaluate the Plant Component of Human Diets: a Proof of Concept. Msystems. 4. PMID 31594830 DOI: 10.1128/mSystems.00458-19  1
2019 Carmody RN, Bisanz JE, Bowen BP, Maurice CF, Lyalina S, Louie KB, Treen D, Chadaideh KS, Maini Rekdal V, Bess EN, Spanogiannopoulos P, Ang QY, Bauer KC, Balon TW, Pollard KS, ... ... Turnbaugh PJ, et al. Cooking shapes the structure and function of the gut microbiome. Nature Microbiology. PMID 31570867 DOI: 10.1038/S41564-019-0569-4  1
2019 Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, ... ... Turnbaugh PJ, et al. Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nature Biotechnology. PMID 31399723 DOI: 10.1038/S41587-019-0252-6  1
2019 Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, ... ... Turnbaugh PJ, et al. Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nature Biotechnology. PMID 31341288 DOI: 10.1038/S41587-019-0209-9  1
2019 Maini Rekdal V, Bess EN, Bisanz JE, Turnbaugh PJ, Balskus EP. Discovery and inhibition of an interspecies gut bacterial pathway for Levodopa metabolism. Science (New York, N.Y.). 364. PMID 31196984 DOI: 10.1126/Science.Aau6323  1
2019 Chagwedera DN, Ang QY, Bisanz JE, Leong YA, Ganeshan K, Cai J, Patterson AD, Turnbaugh PJ, Chawla A. Nutrient Sensing in CD11c Cells Alters the Gut Microbiota to Regulate Food Intake and Body Mass. Cell Metabolism. PMID 31130466 DOI: 10.1016/J.Cmet.2019.05.002  1
2019 Rekdal VM, Bernadino PN, Luescher MU, Kiamehr S, Le C, Bisanz JE, Turnbaugh PJ, Bess EN, Balskus EP. Author response: A widely distributed metalloenzyme class enables gut microbial metabolism of host- and diet-derived catechols Elife. DOI: 10.7554/Elife.50845.Sa2  1
2019 Lozupone CA, Turnbaugh P. Decision letter: Adjusting for age improves identification of gut microbiome alterations in multiple diseases Elife. DOI: 10.7554/Elife.50240.Sa1  1
2019 Turnbaugh P, Quince C, Gibbons S. Decision letter: Consistent and correctable bias in metagenomic sequencing experiments Elife. DOI: 10.7554/Elife.46923.026  1
2018 Bisanz JE, Spanogiannopoulos P, Pieper LM, Bustion AE, Turnbaugh PJ. How to determine the role of the microbiome in drug disposition. Drug Metabolism and Disposition: the Biological Fate of Chemicals. PMID 30111623 DOI: 10.1124/Dmd.118.083402  1
2018 Balskus EP, Turnbaugh PJ, Wolan DW. Announcement of 2019 Keystone Symposia Conference: "Microbiome: Chemical Mechanisms and Biological Consequences". Msystems. 3. PMID 30057942 DOI: 10.1128/mSystems.00115-18  1
2018 Koppel N, Bisanz JE, Pandelia ME, Turnbaugh PJ, Balskus EP. Discovery and characterization of a prevalent human gut bacterial enzyme sufficient for the inactivation of a family of plant toxins. Elife. 7. PMID 29761785 DOI: 10.7554/Elife.33953  1
2018 Spanogiannopoulos P, Turnbaugh PJ. Broad collateral damage of drugs against the gut microbiome. Nature Reviews. Gastroenterology & Hepatology. PMID 29752457 DOI: 10.1038/S41575-018-0028-3  1
2018 Zhang L, Carmody RN, Kalariya HM, Duran RM, Moskal K, Poulev A, Kuhn P, Tveter KM, Turnbaugh PJ, Raskin I, Roopchand DE. Grape proanthocyanidin-induced intestinal bloom of Akkermansia muciniphila is dependent on its baseline abundance and precedes activation of host genes related to metabolic health. The Journal of Nutritional Biochemistry. 56: 142-151. PMID 29571008 DOI: 10.1016/J.Jnutbio.2018.02.009  1
2018 Fuks G, Elgart M, Amir A, Zeisel A, Turnbaugh PJ, Soen Y, Shental N. Combining 16S rRNA gene variable regions enables high-resolution microbial community profiling. Microbiome. 6: 17. PMID 29373999 DOI: 10.1186/S40168-017-0396-X  1
2018 Koppel N, Bisanz JE, Pandelia M, Turnbaugh PJ, Balskus EP. Author response: Discovery and characterization of a prevalent human gut bacterial enzyme sufficient for the inactivation of a family of plant toxins Elife. DOI: 10.7554/Elife.33953.044  1
2016 Bokulich NA, Rideout JR, Mercurio WG, Shiffer A, Wolfe B, Maurice CF, Dutton RJ, Turnbaugh PJ, Knight R, Caporaso JG. mockrobiota: a Public Resource for Microbiome Bioinformatics Benchmarking. Msystems. 1. PMID 27822553 DOI: 10.1128/mSystems.00062-16  1
2016 Nayak RR, Turnbaugh PJ. Mirror, mirror on the wall: which microbiomes will help heal them all? Bmc Medicine. 14: 72. PMID 27146150 DOI: 10.1186/S12916-016-0622-6  1
2016 Spanogiannopoulos P, Bess EN, Carmody RN, Turnbaugh PJ. The microbial pharmacists within us: a metagenomic view of xenobiotic metabolism. Nature Reviews. Microbiology. PMID 26972811 DOI: 10.1038/Nrmicro.2016.17  1
2016 Spanogiannopoulos P, Turnbaugh PJ. Metabolism of anticancer drugs by the human gut microbiome Toxicology Letters. 259. DOI: 10.1016/J.Toxlet.2016.07.683  1
2015 Jumpertz von Schwartzenberg R, Turnbaugh PJ. Siri, What Should I Eat? Cell. 163: 1051-2. PMID 26590412 DOI: 10.1016/J.Cell.2015.11.012  1
2015 Maurice CF, Cl Knowles S, Ladau J, Pollard KS, Fenton A, Pedersen AB, Turnbaugh PJ. Marked seasonal variation in the wild mouse gut microbiota. The Isme Journal. PMID 26023870 DOI: 10.1038/Ismej.2015.53  1
2015 David LA, Weil A, Ryan ET, Calderwood SB, Harris JB, Chowdhury F, Begum Y, Qadri F, LaRocque RC, Turnbaugh PJ. Gut microbial succession follows acute secretory diarrhea in humans. Mbio. 6: e00381-15. PMID 25991682 DOI: 10.1128/Mbio.00381-15  1
2015 Martínez-del Campo A, Bodea S, Hamer HA, Marks JA, Haiser HJ, Turnbaugh PJ, Balskus EP. Characterization and detection of a widely distributed gene cluster that predicts anaerobic choline utilization by human gut bacteria. Mbio. 6. PMID 25873372 DOI: 10.1128/Mbio.00042-15  1
2015 Roopchand DE, Carmody RN, Kuhn P, Moskal K, Rojas-Silva P, Turnbaugh PJ, Raskin I. Dietary Polyphenols Promote Growth of the Gut Bacterium Akkermansia muciniphila and Attenuate High-Fat Diet-Induced Metabolic Syndrome. Diabetes. 64: 2847-58. PMID 25845659 DOI: 10.2337/Db14-1916  1
2015 Perron GG, Whyte L, Turnbaugh PJ, Goordial J, Hanage WP, Dantas G, Desai MM. Functional characterization of bacteria isolated from ancient arctic soil exposes diverse resistance mechanisms to modern antibiotics. Plos One. 10: e0069533. PMID 25807523 DOI: 10.1371/Journal.Pone.0069533  1
2015 Carmody RN, Gerber GK, Luevano JM, Gatti DM, Somes L, Svenson KL, Turnbaugh PJ. Diet dominates host genotype in shaping the murine gut microbiota. Cell Host & Microbe. 17: 72-84. PMID 25532804 DOI: 10.1016/J.Chom.2014.11.010  1
2015 Maurice CF, CL Knowles S, Ladau J, Pollard KS, Fenton A, Pedersen AB, Turnbaugh PJ. Marked seasonal variation in the wild mouse gut microbiota Isme Journal. DOI: 10.1038/ismej.2015.53  1
2014 Pickard JM, Maurice CF, Kinnebrew MA, Abt MC, Schenten D, Golovkina TV, Bogatyrev SR, Ismagilov RF, Pamer EG, Turnbaugh PJ, Chervonsky AV. Rapid fucosylation of intestinal epithelium sustains host-commensal symbiosis in sickness. Nature. 514: 638-41. PMID 25274297 DOI: 10.1038/Nature13823  1
2014 Patterson AD, Turnbaugh PJ. Microbial determinants of biochemical individuality and their impact on toxicology and pharmacology. Cell Metabolism. 20: 761-8. PMID 25156450 DOI: 10.1016/J.Cmet.2014.07.002  1
2014 Carmody RN, Turnbaugh PJ. Host-microbial interactions in the metabolism of therapeutic and diet-derived xenobiotics. The Journal of Clinical Investigation. 124: 4173-81. PMID 25105361 DOI: 10.1172/Jci72335  1
2014 Haiser HJ, Seim KL, Balskus EP, Turnbaugh PJ. Mechanistic insight into digoxin inactivation by Eggerthella lenta augments our understanding of its pharmacokinetics. Gut Microbes. 5: 233-8. PMID 24637603 DOI: 10.4161/Gmic.27915  1
2014 Ursell LK, Haiser HJ, Van Treuren W, Garg N, Reddivari L, Vanamala J, Dorrestein PC, Turnbaugh PJ, Knight R. The intestinal metabolome: an intersection between microbiota and host. Gastroenterology. 146: 1470-6. PMID 24631493 DOI: 10.1053/J.Gastro.2014.03.001  1
2014 David LA, Maurice CF, Carmody RN, Gootenberg DB, Button JE, Wolfe BE, Ling AV, Devlin AS, Varma Y, Fischbach MA, Biddinger SB, Dutton RJ, Turnbaugh PJ. Diet rapidly and reproducibly alters the human gut microbiome. Nature. 505: 559-63. PMID 24336217 DOI: 10.1038/Nature12820  1
2014 Ravel J, Blaser MJ, Braun J, Brown E, Bushman FD, Chang EB, Davies J, Dewey KG, Dinan T, Dominguez-Bello M, Erdman SE, Finlay BB, Garrett WS, Huffnagle GB, Huttenhower C, ... ... Turnbaugh PJ, et al. Human microbiome science: Vision for the future, Bethesda, MD, July 24 to 26, 2013 Microbiome. 2. DOI: 10.1186/2049-2618-2-16  1
2013 Amir A, Zeisel A, Zuk O, Elgart M, Stern S, Shamir O, Turnbaugh PJ, Soen Y, Shental N. High-resolution microbial community reconstruction by integrating short reads from multiple 16S rRNA regions. Nucleic Acids Research. 41: e205. PMID 24214960 DOI: 10.1093/Nar/Gkt1070  1
2013 Maurice CF, Turnbaugh PJ. Quantifying and identifying the active and damaged subsets of indigenous microbial communities Methods in Enzymology. 531: 91-107. PMID 24060117 DOI: 10.1016/B978-0-12-407863-5.00005-8  1
2013 Haiser HJ, Gootenberg DB, Chatman K, Sirasani G, Balskus EP, Turnbaugh PJ. Predicting and manipulating cardiac drug inactivation by the human gut bacterium Eggerthella lenta. Science (New York, N.Y.). 341: 295-8. PMID 23869020 DOI: 10.1126/Science.1235872  1
2013 Devkota S, Turnbaugh PJ. Cancer: An acidic link. Nature. 499: 37-8. PMID 23803768 DOI: 10.1038/Nature12404  1
2013 Brown J, de Vos WM, DiStefano PS, Doré J, Huttenhower C, Knight R, Lawley TD, Raes J, Turnbaugh P. Translating the human microbiome. Nature Biotechnology. 31: 304-8. PMID 23563424 DOI: 10.1038/Nbt.2543  1
2013 Maurice CF, Turnbaugh PJ. Quantifying the metabolic activities of human-associated microbial communities across multiple ecological scales. Fems Microbiology Reviews. 37: 830-48. PMID 23550823 DOI: 10.1111/1574-6976.12022  1
2013 Liou AP, Paziuk M, Luevano JM, Machineni S, Turnbaugh PJ, Kaplan LM. Conserved shifts in the gut microbiota due to gastric bypass reduce host weight and adiposity. Science Translational Medicine. 5: 178ra41. PMID 23536013 DOI: 10.1126/Scitranslmed.3005687  1
2013 Maurice CF, Haiser HJ, Turnbaugh PJ. Xenobiotics shape the physiology and gene expression of the active human gut microbiome Cell. 152: 39-50. PMID 23332745 DOI: 10.1016/J.Cell.2012.10.052  1
2013 Haiser HJ, Turnbaugh PJ. Developing a metagenomic view of xenobiotic metabolism. Pharmacological Research. 69: 21-31. PMID 22902524 DOI: 10.1016/J.Phrs.2012.07.009  1
2012 Liou AP, Turnbaugh PJ. Antibiotic exposure promotes fat gain. Cell Metabolism. 16: 408-10. PMID 23040064 DOI: 10.1016/J.Cmet.2012.09.009  1
2012 Carmody RN, Turnbaugh PJ. Gut microbes make for fattier fish. Cell Host & Microbe. 12: 259-61. PMID 22980321 DOI: 10.1016/J.Chom.2012.08.006  1
2012 Dutton RJ, Turnbaugh PJ. Taking a metagenomic view of human nutrition. Current Opinion in Clinical Nutrition and Metabolic Care. 15: 448-54. PMID 22878238 DOI: 10.1097/Mco.0B013E3283561133  1
2012 Turnbaugh PJ. Microbiology: fat, bile and gut microbes. Nature. 487: 47-8. PMID 22763552 DOI: 10.1038/487047A  1
2012 Haiser HJ, Turnbaugh PJ. Is it time for a metagenomic basis of therapeutics? Science (New York, N.Y.). 336: 1253-5. PMID 22674325 DOI: 10.1126/Science.1224396  1
2012 Greenblum S, Turnbaugh PJ, Borenstein E. Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease. Proceedings of the National Academy of Sciences of the United States of America. 109: 594-9. PMID 22184244 DOI: 10.1073/Pnas.1116053109  1
2011 Reshef DN, Reshef YA, Finucane HK, Grossman SR, McVean G, Turnbaugh PJ, Lander ES, Mitzenmacher M, Sabeti PC. Detecting novel associations in large data sets. Science (New York, N.Y.). 334: 1518-24. PMID 22174245 DOI: 10.1126/Science.1205438  1
2011 Babayan SA, Allen JE, Bradley JE, Geuking MB, Graham AL, Grencis RK, Kaufman J, McCoy KD, Paterson S, Smith KG, Turnbaugh PJ, Viney ME, Maizels RM, Pedersen AB. Wild immunology: converging on the real world. Annals of the New York Academy of Sciences. 1236: 17-29. PMID 22032399 DOI: 10.1111/J.1749-6632.2011.06251.X  1
2011 Turnbaugh PJ, Stintzi A. Human health and disease in a microbial world. Frontiers in Microbiology. 2: 190. PMID 21954396 DOI: 10.3389/Fmicb.2011.00190  1
2011 Jumpertz R, Le DS, Turnbaugh PJ, Trinidad C, Bogardus C, Gordon JI, Krakoff J. Energy-balance studies reveal associations between gut microbes, caloric load, and nutrient absorption in humans. The American Journal of Clinical Nutrition. 94: 58-65. PMID 21543530 DOI: 10.3945/Ajcn.110.010132  1
2011 Swanson KS, Suchodolski JS, Turnbaugh PJ. Companion animals symposium: Microbes and health Journal of Animal Science. 89: 1496-1497. PMID 21521817 DOI: 10.2527/Jas.2011-3873  1
2011 Gonzalez A, Stombaugh J, Lozupone C, Turnbaugh PJ, Gordon JI, Knight R. The mind-body-microbial continuum. Dialogues in Clinical Neuroscience. 13: 55-62. PMID 21485746  1
2011 Patil KR, Haider P, Pope PB, Turnbaugh PJ, Morrison M, Scheffer T, McHardy AC. Taxonomic metagenome sequence assignment with structured output models. Nature Methods. 8: 191-2. PMID 21358620 DOI: 10.1038/Nmeth0311-191  1
2011 Quince C, Lanzen A, Davenport RJ, Turnbaugh PJ. Removing noise from pyrosequenced amplicons. Bmc Bioinformatics. 12: 38. PMID 21276213 DOI: 10.1186/1471-2105-12-38  1
2011 Gootenberg DB, Turnbaugh PJ. Companion animals symposium: Humanized animal models of the microbiome Journal of Animal Science. 89: 1531-1537. PMID 20833767 DOI: 10.2527/Jas.2010-3371  1
2011 Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Lozupone CA, Turnbaugh PJ, Fierer N, Knight R. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. Proceedings of the National Academy of Sciences of the United States of America. 108: 4516-22. PMID 20534432 DOI: 10.1073/Pnas.1000080107  1
2010 Turnbaugh PJ, Henrissat B, Gordon JI. Viewing the human microbiome through three-dimensional glasses: integrating structural and functional studies to better define the properties of myriad carbohydrate-active enzymes. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1261-4. PMID 20944220 DOI: 10.1107/S1744309110029088  1
2010 Peterson DA, Turnbaugh PJ. A microbe-dependent viral key to Crohn's box. Science Translational Medicine. 2: 43ps39. PMID 20686177 DOI: 10.1126/Scitranslmed.3001422  1
2010 Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Peña AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, ... ... Turnbaugh PJ, et al. QIIME allows analysis of high-throughput community sequencing data. Nature Methods. 7: 335-6. PMID 20383131 DOI: 10.1038/Nmeth.F.303  1
2010 Turnbaugh PJ, Quince C, Faith JJ, McHardy AC, Yatsunenko T, Niazi F, Affourtit J, Egholm M, Henrissat B, Knight R, Gordon JI. Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins. Proceedings of the National Academy of Sciences of the United States of America. 107: 7503-8. PMID 20363958 DOI: 10.1073/Pnas.1002355107  1
2009 Turnbaugh PJ, Ridaura VK, Faith JJ, Rey FE, Knight R, Gordon JI. The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice. Science Translational Medicine. 1: 6ra14. PMID 20368178 DOI: 10.1126/Scitranslmed.3000322  1
2009 Turnbaugh PJ, Gordon JI. The core gut microbiome, energy balance and obesity. The Journal of Physiology. 587: 4153-8. PMID 19491241 DOI: 10.1113/Jphysiol.2009.174136  1
2009 Mahowald MA, Rey FE, Seedorf H, Turnbaugh PJ, Fulton RS, Wollam A, Shah N, Wang C, Magrini V, Wilson RK, Cantarel BL, Coutinho PM, Henrissat B, Crock LW, Russell A, et al. Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla. Proceedings of the National Academy of Sciences of the United States of America. 106: 5859-64. PMID 19321416 DOI: 10.1073/Pnas.0901529106  1
2009 Turnbaugh PJ, Hamady M, Yatsunenko T, Cantarel BL, Duncan A, Ley RE, Sogin ML, Jones WJ, Roe BA, Affourtit JP, Egholm M, Henrissat B, Heath AC, Knight R, Gordon JI. A core gut microbiome in obese and lean twins. Nature. 457: 480-4. PMID 19043404 DOI: 10.1038/Nature07540  1
2008 Turnbaugh PJ, Gordon JI. An invitation to the marriage of metagenomics and metabolomics. Cell. 134: 708-13. PMID 18775300 DOI: 10.1016/J.Cell.2008.08.025  1
2008 Ley RE, Hamady M, Lozupone C, Turnbaugh PJ, Ramey RR, Bircher JS, Schlegel ML, Tucker TA, Schrenzel MD, Knight R, Gordon JI. Evolution of mammals and their gut microbes. Science (New York, N.Y.). 320: 1647-51. PMID 18497261 DOI: 10.1126/Science.1155725  1
2008 Turnbaugh PJ, Bäckhed F, Fulton L, Gordon JI. Diet-induced obesity is linked to marked but reversible alterations in the mouse distal gut microbiome. Cell Host & Microbe. 3: 213-23. PMID 18407065 DOI: 10.1016/J.Chom.2008.02.015  1
2008 Zaneveld J, Turnbaugh PJ, Lozupone C, Ley RE, Hamady M, Gordon JI, Knight R. Host-bacterial coevolution and the search for new drug targets. Current Opinion in Chemical Biology. 12: 109-14. PMID 18280814 DOI: 10.1016/J.Cbpa.2008.01.015  1
2007 Turnbaugh PJ, Ley RE, Hamady M, Fraser-Liggett CM, Knight R, Gordon JI. The human microbiome project. Nature. 449: 804-10. PMID 17943116 DOI: 10.1038/Nature06244  1
2006 Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, Gordon JI. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature. 444: 1027-31. PMID 17183312 DOI: 10.1038/Nature05414  1
2006 Ley RE, Turnbaugh PJ, Klein S, Gordon JI. Microbial ecology: human gut microbes associated with obesity. Nature. 444: 1022-3. PMID 17183309 DOI: 10.1038/4441022A  1
2006 Gill SR, Pop M, Deboy RT, Eckburg PB, Turnbaugh PJ, Samuel BS, Gordon JI, Relman DA, Fraser-Liggett CM, Nelson KE. Metagenomic analysis of the human distal gut microbiome. Science (New York, N.Y.). 312: 1355-9. PMID 16741115 DOI: 10.1126/Science.1124234  1
2005 Gertz J, Riles L, Turnbaugh P, Ho SW, Cohen BA. Discovery, validation, and genetic dissection of transcription factor binding sites by comparative and functional genomics. Genome Research. 15: 1145-52. PMID 16077013 DOI: 10.1101/Gr.3859605  1
2005 Ley RE, Bäckhed F, Turnbaugh P, Lozupone CA, Knight RD, Gordon JI. Obesity alters gut microbial ecology. Proceedings of the National Academy of Sciences of the United States of America. 102: 11070-5. PMID 16033867 DOI: 10.1073/Pnas.0504978102  1
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