| Year |
Citation |
Score |
| 2024 |
Chang HW, Lee EM, Wang Y, Zhou C, Pruss KM, Henrissat S, Chen RY, Kao C, Hibberd MC, Lynn HM, Webber DM, Crane M, Cheng J, Rodionov DA, Arzamasov AA, ... ... Gordon JI, et al. Prevotella copri and microbiota members mediate the beneficial effects of a therapeutic food for malnutrition. Nature Microbiology. PMID 38503977 DOI: 10.1038/s41564-024-01628-7 |
0.315 |
|
| 2023 |
Beller ZW, Wesener DA, Seebeck TR, Guruge JL, Byrne AE, Henrissat S, Terrapon N, Henrissat B, Rodionov DA, Osterman AL, Suarez C, Bacalzo NP, Chen Y, Couture G, Lebrilla CB, ... ... Gordon JI, et al. Inducible CRISPR-targeted "knockdown" of human gut in gnotobiotic mice discloses glycan utilization strategies. Proceedings of the National Academy of Sciences of the United States of America. 120: e2311422120. PMID 37733741 DOI: 10.1073/pnas.2311422120 |
0.354 |
|
| 2023 |
Lawenius L, Cowardin C, Grahnemo L, Scheffler JM, Horkeby K, Engdahl C, Wu J, Vandenput L, Koskela A, Tukkanen J, Coward E, Hveem K, Langhammer A, Abrahamsson S, Gordon JI, et al. Transplantation of gut microbiota from old mice into young healthy mice reduces lean mass but not bone mass. Gut Microbes. 15: 2236755. PMID 37475479 DOI: 10.1080/19490976.2023.2236755 |
0.742 |
|
| 2022 |
Zaydman MA, Little AA, Haro F, Aksianiuk V, Buchser WJ, DiAntonio A, Gordon JI, Milbrandt J, Raman AS. Defining hierarchical protein interaction networks from spectral analysis of bacterial proteomes. Elife. 11. PMID 35976223 DOI: 10.7554/eLife.74104 |
0.454 |
|
| 2022 |
Weagley JS, Zaydman M, Venkatesh S, Sasaki Y, Damaraju N, Yenkin A, Buchser W, Rodionov DA, Osterman A, Ahmed T, Barratt MJ, DiAntonio A, Milbrandt J, Gordon JI. Products of gut microbial Toll/interleukin-1 receptor domain NADase activities in gnotobiotic mice and Bangladeshi children with malnutrition. Cell Reports. 39: 110738. PMID 35476981 DOI: 10.1016/j.celrep.2022.110738 |
0.538 |
|
| 2022 |
Barratt MJ, Nuzhat S, Ahsan K, Frese SA, Arzamasov AA, Sarker SA, Islam MM, Palit P, Islam MR, Hibberd MC, Nakshatri S, Cowardin CA, Guruge JL, Byrne AE, Venkatesh S, ... ... Gordon JI, et al. treatment promotes weight gain in Bangladeshi infants with severe acute malnutrition. Science Translational Medicine. 14: eabk1107. PMID 35417188 DOI: 10.1126/scitranslmed.abk1107 |
0.736 |
|
| 2020 |
Feng L, Raman AS, Hibberd MC, Cheng J, Griffin NW, Peng Y, Leyn SA, Rodionov DA, Osterman AL, Gordon JI. Identifying determinants of bacterial fitness in a model of human gut microbial succession. Proceedings of the National Academy of Sciences of the United States of America. PMID 31969452 DOI: 10.1073/Pnas.1918951117 |
0.309 |
|
| 2019 |
Halatchev IG, O'Donnell D, Hibberd MC, Gordon JI. Applying indirect open-circuit calorimetry to study energy expenditure in gnotobiotic mice harboring different human gut microbial communities. Microbiome. 7: 158. PMID 31831058 DOI: 10.1186/s40168-019-0769-4 |
0.797 |
|
| 2019 |
Wang Y, Chiang IL, Ohara TE, Fujii S, Cheng J, Muegge BD, Ver Heul A, Han ND, Lu Q, Xiong S, Chen F, Lai CW, Janova H, Wu R, Whitehurst CE, ... ... Gordon JI, et al. Long-Term Culture Captures Injury-Repair Cycles of Colonic Stem Cells. Cell. PMID 31708126 DOI: 10.1016/J.Cell.2019.10.015 |
0.772 |
|
| 2019 |
Raman AS, Gehrig JL, Venkatesh S, Chang HW, Hibberd MC, Subramanian S, Kang G, Bessong PO, Lima AAM, Kosek MN, Petri WA, Rodionov DA, Arzamasov AA, Leyn SA, Osterman AL, ... ... Gordon JI, et al. A sparse covarying unit that describes healthy and impaired human gut microbiota development. Science (New York, N.Y.). 365. PMID 31296739 DOI: 10.1126/Science.Aau4735 |
0.5 |
|
| 2019 |
Gehrig JL, Venkatesh S, Chang HW, Hibberd MC, Kung VL, Cheng J, Chen RY, Subramanian S, Cowardin CA, Meier MF, O'Donnell D, Talcott M, Spears LD, Semenkovich CF, Henrissat B, ... ... Gordon JI, et al. Effects of microbiota-directed foods in gnotobiotic animals and undernourished children. Science (New York, N.Y.). 365. PMID 31296738 DOI: 10.1126/Science.Aau4732 |
0.771 |
|
| 2019 |
Cowardin CA, Ahern PP, Kung VL, Hibberd MC, Cheng J, Guruge JL, Sundaresan V, Head RD, Barile D, Mills DA, Barratt MJ, Huq S, Ahmed T, Gordon JI. Mechanisms by which sialylated milk oligosaccharides impact bone biology in a gnotobiotic mouse model of infant undernutrition. Proceedings of the National Academy of Sciences of the United States of America. PMID 31138692 DOI: 10.1073/pnas.1821770116 |
0.763 |
|
| 2018 |
An J, Wang L, Patnode ML, Ridaura VK, Haldeman JM, Stevens RD, Ilkayeva O, Bain JR, Muehlbauer MJ, Glynn EL, Thomas S, Muoio D, Summers SA, Vath JE, Hughes TE, ... Gordon JI, et al. Physiological mechanisms of sustained fumagillin-induced weight loss. Jci Insight. 3. PMID 29515039 DOI: 10.1172/Jci.Insight.99453 |
0.762 |
|
| 2017 |
Mark Welch JL, Hasegawa Y, McNulty NP, Gordon JI, Borisy GG. Spatial organization of a model 15-member human gut microbiota established in gnotobiotic mice. Proceedings of the National Academy of Sciences of the United States of America. 114: E9105-E9114. PMID 29073107 DOI: 10.1073/Pnas.1711596114 |
0.79 |
|
| 2017 |
Mahfuz M, Das S, Mazumder RN, Masudur Rahman M, Haque R, Bhuiyan MMR, Akhter H, Sarker MSA, Mondal D, Muaz SSA, Karim ASMB, Borowitz SM, Moskaluk CA, Barratt MJ, Petri WA, ... Gordon JI, et al. Bangladesh Environmental Enteric Dysfunction (BEED) study: protocol for a community-based intervention study to validate non-invasive biomarkers of environmental enteric dysfunction. Bmj Open. 7: e017768. PMID 28801442 DOI: 10.1136/Bmjopen-2017-017768 |
0.422 |
|
| 2016 |
Semenkovich NP, Planer JD, Ahern PP, Griffin NW, Lin CY, Gordon JI. Impact of the gut microbiota on enhancer accessibility in gut intraepithelial lymphocytes. Proceedings of the National Academy of Sciences of the United States of America. PMID 27911843 DOI: 10.1073/Pnas.1617793113 |
0.33 |
|
| 2016 |
Wagner VE, Dey N, Guruge J, Hsiao A, Ahern PP, Semenkovich NP, Blanton LV, Cheng J, Griffin N, Stappenbeck TS, Ilkayeva O, Newgard CB, Petri W, Haque R, Ahmed T, ... Gordon JI, et al. Effects of a gut pathobiont in a gnotobiotic mouse model of childhood undernutrition. Science Translational Medicine. 8: 366ra164. PMID 27881825 DOI: 10.1126/Scitranslmed.Aah4669 |
0.75 |
|
| 2016 |
Planer JD, Peng Y, Kau AL, Blanton LV, Ndao IM, Tarr PI, Warner BB, Gordon JI. Development of the gut microbiota and mucosal IgA responses in twins and gnotobiotic mice. Nature. 534: 263-6. PMID 27279225 DOI: 10.1038/Nature17940 |
0.323 |
|
| 2015 |
Goyal MS, Venkatesh S, Milbrandt J, Gordon JI, Raichle ME. Feeding the brain and nurturing the mind: Linking nutrition and the gut microbiota to brain development. Proceedings of the National Academy of Sciences of the United States of America. 112: 14105-14112. PMID 26578751 DOI: 10.1073/Pnas.1511465112 |
0.469 |
|
| 2015 |
Wu M, McNulty NP, Rodionov DA, Khoroshkin MS, Griffin NW, Cheng J, Latreille P, Kerstetter RA, Terrapon N, Henrissat B, Osterman AL, Gordon JI. Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides. Science (New York, N.Y.). 350: aac5992. PMID 26430127 DOI: 10.1126/Science.Aac5992 |
0.801 |
|
| 2015 |
Dey N, Wagner VE, Blanton LV, Cheng J, Fontana L, Haque R, Ahmed T, Gordon JI. Regulators of Gut Motility Revealed by a Gnotobiotic Model of Diet-Microbiome Interactions Related to Travel. Cell. 163: 95-107. PMID 26406373 DOI: 10.1016/j.cell.2015.08.059 |
0.325 |
|
| 2015 |
Reyes A, Blanton LV, Cao S, Zhao G, Manary M, Trehan I, Smith MI, Wang D, Virgin HW, Rohwer F, Gordon JI. Gut DNA viromes of Malawian twins discordant for severe acute malnutrition. Proceedings of the National Academy of Sciences of the United States of America. 112: 11941-6. PMID 26351661 DOI: 10.1073/Pnas.1514285112 |
0.536 |
|
| 2015 |
Peterson DA, Planer JD, Guruge JL, Xue L, Downey-Virgin W, Goodman AL, Seedorf H, Gordon JI. Characterizing the interactions between a naturally primed immunoglobulin A and its conserved Bacteroides thetaiotaomicron species-specific epitope in gnotobiotic mice. The Journal of Biological Chemistry. 290: 12630-49. PMID 25795776 DOI: 10.1074/Jbc.M114.633800 |
0.564 |
|
| 2015 |
Kau AL, Planer JD, Liu J, Rao S, Yatsunenko T, Trehan I, Manary MJ, Liu TC, Stappenbeck TS, Maleta KM, Ashorn P, Dewey KG, Houpt ER, Hsieh CS, Gordon JI. Functional characterization of IgA-targeted bacterial taxa from undernourished Malawian children that produce diet-dependent enteropathy. Science Translational Medicine. 7: 276ra24. PMID 25717097 DOI: 10.1126/Scitranslmed.Aaa4877 |
0.807 |
|
| 2014 |
Horton MW, Bodenhausen N, Beilsmith K, Meng D, Muegge BD, Subramanian S, Vetter MM, Vilhjálmsson BJ, Nordborg M, Gordon JI, Bergelson J. Genome-wide association study of Arabidopsis thaliana leaf microbial community. Nature Communications. 5: 5320. PMID 25382143 DOI: 10.1038/Ncomms6320 |
0.809 |
|
| 2014 |
Seedorf H, Griffin NW, Ridaura VK, Reyes A, Cheng J, Rey FE, Smith MI, Simon GM, Scheffrahn RH, Woebken D, Spormann AM, Van Treuren W, Ursell LK, Pirrung M, Robbins-Pianka A, ... ... Gordon JI, et al. Bacteria from diverse habitats colonize and compete in the mouse gut. Cell. 159: 253-66. PMID 25284151 DOI: 10.1016/J.Cell.2014.09.008 |
0.828 |
|
| 2014 |
Hsiao A, Ahmed AM, Subramanian S, Griffin NW, Drewry LL, Petri WA, Haque R, Ahmed T, Gordon JI. Members of the human gut microbiota involved in recovery from Vibrio cholerae infection. Nature. 515: 423-6. PMID 25231861 DOI: 10.1038/Nature13738 |
0.505 |
|
| 2014 |
Subramanian S, Huq S, Yatsunenko T, Haque R, Mahfuz M, Alam MA, Benezra A, DeStefano J, Meier MF, Muegge BD, Barratt MJ, VanArendonk LG, Zhang Q, Province MA, Petri WA, ... ... Gordon JI, et al. Persistent gut microbiota immaturity in malnourished Bangladeshi children. Nature. 510: 417-21. PMID 24896187 DOI: 10.1038/Nature13421 |
0.784 |
|
| 2014 |
Werner JJ, Garcia ML, Perkins SD, Yarasheski KE, Smith SR, Muegge BD, Stadermann FJ, DeRito CM, Floss C, Madsen EL, Gordon JI, Angenent LT. Microbial community dynamics and stability during an ammonia-induced shift to syntrophic acetate oxidation. Applied and Environmental Microbiology. 80: 3375-83. PMID 24657858 DOI: 10.1128/Aem.00166-14 |
0.797 |
|
| 2014 |
Faith JJ, Ahern PP, Ridaura VK, Cheng J, Gordon JI. Identifying gut microbe-host phenotype relationships using combinatorial communities in gnotobiotic mice. Science Translational Medicine. 6: 220ra11. PMID 24452263 DOI: 10.1126/Scitranslmed.3008051 |
0.807 |
|
| 2014 |
TerAvest MA, He Z, Rosenbaum MA, Martens EC, Cotta MA, Gordon JI, Angenent LT. Regulated expression of polysaccharide utilization and capsular biosynthesis loci in biofilm and planktonic Bacteroides thetaiotaomicron during growth in chemostats. Biotechnology and Bioengineering. 111: 165-73. PMID 23996813 DOI: 10.1002/Bit.24994 |
0.315 |
|
| 2013 |
Reyes A, Wu M, McNulty NP, Rohwer FL, Gordon JI. Gnotobiotic mouse model of phage-bacterial host dynamics in the human gut. Proceedings of the National Academy of Sciences of the United States of America. 110: 20236-41. PMID 24259713 DOI: 10.1073/Pnas.1319470110 |
0.832 |
|
| 2013 |
Kashyap PC, Marcobal A, Ursell LK, Smits SA, Sonnenburg ED, Costello EK, Higginbottom SK, Domino SE, Holmes SP, Relman DA, Knight R, Gordon JI, Sonnenburg JL. Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota. Proceedings of the National Academy of Sciences of the United States of America. 110: 17059-64. PMID 24062455 DOI: 10.1073/Pnas.1306070110 |
0.322 |
|
| 2013 |
Ridaura VK, Faith JJ, Rey FE, Cheng J, Duncan AE, Kau AL, Griffin NW, Lombard V, Henrissat B, Bain JR, Muehlbauer MJ, Ilkayeva O, Semenkovich CF, Funai K, Hayashi DK, ... ... Gordon JI, et al. Gut microbiota from twins discordant for obesity modulate metabolism in mice. Science (New York, N.Y.). 341: 1241214. PMID 24009397 DOI: 10.1126/Science.1241214 |
0.784 |
|
| 2013 |
McNulty NP, Wu M, Erickson AR, Pan C, Erickson BK, Martens EC, Pudlo NA, Muegge BD, Henrissat B, Hettich RL, Gordon JI. Effects of diet on resource utilization by a model human gut microbiota containing Bacteroides cellulosilyticus WH2, a symbiont with an extensive glycobiome. Plos Biology. 11: e1001637. PMID 23976882 DOI: 10.1371/Journal.Pbio.1001637 |
0.817 |
|
| 2013 |
Rey FE, Gonzalez MD, Cheng J, Wu M, Ahern PP, Gordon JI. Metabolic niche of a prominent sulfate-reducing human gut bacterium. Proceedings of the National Academy of Sciences of the United States of America. 110: 13582-7. PMID 23898195 DOI: 10.1073/Pnas.1312524110 |
0.302 |
|
| 2013 |
Faith JJ, Guruge JL, Charbonneau M, Subramanian S, Seedorf H, Goodman AL, Clemente JC, Knight R, Heath AC, Leibel RL, Rosenbaum M, Gordon JI. The long-term stability of the human gut microbiota. Science (New York, N.Y.). 341: 1237439. PMID 23828941 DOI: 10.1126/Science.1237439 |
0.536 |
|
| 2013 |
El Kaoutari A, Armougom F, Gordon JI, Raoult D, Henrissat B. The abundance and variety of carbohydrate-active enzymes in the human gut microbiota. Nature Reviews. Microbiology. 11: 497-504. PMID 23748339 DOI: 10.1038/Nrmicro3050 |
0.308 |
|
| 2013 |
Cozen W, Yu G, Gail MH, Ridaura VK, Nathwani BN, Hwang AE, Hamilton AS, Mack TM, Gordon JI, Goedert JJ. Fecal microbiota diversity in survivors of adolescent/young adult Hodgkin lymphoma: a study of twins. British Journal of Cancer. 108: 1163-7. PMID 23443674 DOI: 10.1038/Bjc.2013.60 |
0.771 |
|
| 2013 |
Smith MI, Yatsunenko T, Manary MJ, Trehan I, Mkakosya R, Cheng J, Kau AL, Rich SS, Concannon P, Mychaleckyj JC, Liu J, Houpt E, Li JV, Holmes E, Nicholson J, ... ... Gordon JI, et al. Gut microbiomes of Malawian twin pairs discordant for kwashiorkor. Science (New York, N.Y.). 339: 548-54. PMID 23363771 DOI: 10.1126/Science.1229000 |
0.797 |
|
| 2013 |
Lim ES, Reyes A, Antonio M, Saha D, Ikumapayi UN, Adeyemi M, Stine OC, Skelton R, Brennan DC, Mkakosya RS, Manary MJ, Gordon JI, Wang D. Discovery of STL polyomavirus, a polyomavirus of ancestral recombinant origin that encodes a unique T antigen by alternative splicing. Virology. 436: 295-303. PMID 23276405 DOI: 10.1016/J.Virol.2012.12.005 |
0.48 |
|
| 2013 |
Lim ES, Reyes A, Antonio M, Saha D, Ikumapayi UN, Adeyemi M, Stine OC, Skelton R, Brennan DC, Mkakosya RS, Manary MJ, Gordon JI, Wang D. Corrigendum to "Discovery of STL polyomavirus, a polyomavirus of ancestral recombinant origin that encodes a unique T antigen by alternative splicing" [Virology 436 (2) (2013) 295-303] Virology. 439: 163-164. DOI: 10.1016/J.Virol.2013.01.016 |
0.434 |
|
| 2012 |
Lozupone CA, Stombaugh JI, Gordon JI, Jansson JK, Knight R. Diversity, stability and resilience of the human gut microbiota. Nature. 489: 220-30. PMID 22972295 DOI: 10.1038/Nature11550 |
0.31 |
|
| 2012 |
Reyes A, Semenkovich NP, Whiteson K, Rohwer F, Gordon JI. Going viral: next-generation sequencing applied to phage populations in the human gut. Nature Reviews. Microbiology. 10: 607-17. PMID 22864264 DOI: 10.1038/Nrmicro2853 |
0.534 |
|
| 2012 |
Siebrasse EA, Reyes A, Lim ES, Zhao G, Mkakosya RS, Manary MJ, Gordon JI, Wang D. Identification of MW polyomavirus, a novel polyomavirus in human stool. Journal of Virology. 86: 10321-6. PMID 22740408 DOI: 10.1128/Jvi.01210-12 |
0.503 |
|
| 2012 |
Yatsunenko T, Rey FE, Manary MJ, Trehan I, Dominguez-Bello MG, Contreras M, Magris M, Hidalgo G, Baldassano RN, Anokhin AP, Heath AC, Warner B, Reeder J, Kuczynski J, Caporaso JG, ... ... Gordon JI, et al. Human gut microbiome viewed across age and geography. Nature. 486: 222-7. PMID 22699611 DOI: 10.1038/Nature11053 |
0.802 |
|
| 2012 |
Lozupone C, Faust K, Raes J, Faith JJ, Frank DN, Zaneveld J, Gordon JI, Knight R. Identifying genomic and metabolic features that can underlie early successional and opportunistic lifestyles of human gut symbionts. Genome Research. 22: 1974-84. PMID 22665442 DOI: 10.1101/Gr.138198.112 |
0.313 |
|
| 2012 |
Wei X, Yang Z, Rey FE, Ridaura VK, Davidson NO, Gordon JI, Semenkovich CF. Fatty acid synthase modulates intestinal barrier function through palmitoylation of mucin 2. Cell Host & Microbe. 11: 140-52. PMID 22341463 DOI: 10.1016/J.Chom.2011.12.006 |
0.784 |
|
| 2011 |
Martens EC, Lowe EC, Chiang H, Pudlo NA, Wu M, McNulty NP, Abbott DW, Henrissat B, Gilbert HJ, Bolam DN, Gordon JI. Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts. Plos Biology. 9: e1001221. PMID 22205877 DOI: 10.1371/Journal.Pbio.1001221 |
0.808 |
|
| 2011 |
Goodman AL, Wu M, Gordon JI. Identifying microbial fitness determinants by insertion sequencing using genome-wide transposon mutant libraries Nature Protocols. 6: 1969-1980. PMID 22094732 DOI: 10.1038/Nprot.2011.417 |
0.5 |
|
| 2011 |
McNulty NP, Yatsunenko T, Hsiao A, Faith JJ, Muegge BD, Goodman AL, Henrissat B, Oozeer R, Cools-Portier S, Gobert G, Chervaux C, Knights D, Lozupone CA, Knight R, Duncan AE, ... ... Gordon JI, et al. The impact of a consortium of fermented milk strains on the gut microbiome of gnotobiotic mice and monozygotic twins. Science Translational Medicine. 3: 106ra106. PMID 22030749 DOI: 10.1126/Scitranslmed.3002701 |
0.807 |
|
| 2011 |
Kau AL, Ahern PP, Griffin NW, Goodman AL, Gordon JI. Human nutrition, the gut microbiome and the immune system. Nature. 474: 327-36. PMID 21677749 DOI: 10.1038/Nature10213 |
0.539 |
|
| 2011 |
Muegge BD, Kuczynski J, Knights D, Clemente JC, González A, Fontana L, Henrissat B, Knight R, Gordon JI. Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans Science. 332: 970-974. PMID 21596990 DOI: 10.1126/Science.1198719 |
0.822 |
|
| 2011 |
Faith JJ, McNulty NP, Rey FE, Gordon JI. Predicting a human gut microbiota's response to diet in gnotobiotic mice. Science (New York, N.Y.). 333: 101-4. PMID 21596954 DOI: 10.1126/Science.1206025 |
0.795 |
|
| 2011 |
Yilmaz P, Kottmann R, Field D, Knight R, Cole JR, Amaral-Zettler L, Gilbert JA, Karsch-Mizrachi I, Johnston A, Cochrane G, Vaughan R, Hunter C, Park J, Morrison N, Rocca-Serra P, ... ... Gordon JI, et al. Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications. Nature Biotechnology. 29: 415-20. PMID 21552244 DOI: 10.1038/Nbt.1823 |
0.772 |
|
| 2011 |
Jumpertz R, Le DS, Turnbaugh PJ, Trinidad C, Bogardus C, Gordon JI, Krakoff J. Energy-balance studies reveal associations between gut microbes, caloric load, and nutrient absorption in humans. The American Journal of Clinical Nutrition. 94: 58-65. PMID 21543530 DOI: 10.3945/Ajcn.110.010132 |
0.596 |
|
| 2011 |
Benjdia A, Martens EC, Gordon JI, Berteau O. Sulfatases and a radical S-adenosyl-L-methionine (AdoMet) enzyme are key for mucosal foraging and fitness of the prominent human gut symbiont, Bacteroides thetaiotaomicron. The Journal of Biological Chemistry. 286: 25973-82. PMID 21507958 DOI: 10.1074/jbc.M111.228841 |
0.345 |
|
| 2011 |
Gonzalez A, Stombaugh J, Lozupone C, Turnbaugh PJ, Gordon JI, Knight R. The mind-body-microbial continuum. Dialogues in Clinical Neuroscience. 13: 55-62. PMID 21485746 |
0.591 |
|
| 2011 |
Goodman AL, Kallstrom G, Faith JJ, Reyes A, Moore A, Dantas G, Gordon JI. Extensive personal human gut microbiota culture collections characterized and manipulated in gnotobiotic mice Proceedings of the National Academy of Sciences of the United States of America. 108: 6252-6257. PMID 21436049 DOI: 10.1073/Pnas.1102938108 |
0.693 |
|
| 2010 |
Turnbaugh PJ, Henrissat B, Gordon JI. Viewing the human microbiome through three-dimensional glasses: integrating structural and functional studies to better define the properties of myriad carbohydrate-active enzymes. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1261-4. PMID 20944220 DOI: 10.1107/S1744309110029088 |
0.613 |
|
| 2010 |
Garrett WS, Gallini CA, Yatsunenko T, Michaud M, DuBois A, Delaney ML, Punit S, Karlsson M, Bry L, Glickman JN, Gordon JI, Onderdonk AB, Glimcher LH. Enterobacteriaceae act in concert with the gut microbiota to induce spontaneous and maternally transmitted colitis. Cell Host & Microbe. 8: 292-300. PMID 20833380 DOI: 10.1016/J.Chom.2010.08.004 |
0.802 |
|
| 2010 |
Goodman AL, Gordon JI. Our unindicted coconspirators: Human metabolism from a microbial perspective Cell Metabolism. 12: 111-116. PMID 20674856 DOI: 10.1016/J.Cmet.2010.07.001 |
0.522 |
|
| 2010 |
Faith JJ, Rey FE, O'Donnell D, Karlsson M, McNulty NP, Kallstrom G, Goodman AL, Gordon JI. Creating and characterizing communities of human gut microbes in gnotobiotic mice Isme Journal. 4: 1094-1098. PMID 20664551 DOI: 10.1038/Ismej.2010.110 |
0.809 |
|
| 2010 |
Reyes A, Haynes M, Hanson N, Angly FE, Heath AC, Rohwer F, Gordon JI. Viruses in the faecal microbiota of monozygotic twins and their mothers. Nature. 466: 334-8. PMID 20631792 DOI: 10.1038/Nature09199 |
0.569 |
|
| 2010 |
Costello EK, Gordon JI, Secor SM, Knight R. Postprandial remodeling of the gut microbiota in Burmese pythons. The Isme Journal. 4: 1375-85. PMID 20520652 DOI: 10.1038/Ismej.2010.71 |
0.351 |
|
| 2010 |
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Peña AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, et al. QIIME allows analysis of high-throughput community sequencing data. Nature Methods. 7: 335-6. PMID 20383131 DOI: 10.1038/Nmeth.F.303 |
0.769 |
|
| 2010 |
Turnbaugh PJ, Quince C, Faith JJ, McHardy AC, Yatsunenko T, Niazi F, Affourtit J, Egholm M, Henrissat B, Knight R, Gordon JI. Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins. Proceedings of the National Academy of Sciences of the United States of America. 107: 7503-8. PMID 20363958 DOI: 10.1073/Pnas.1002355107 |
0.795 |
|
| 2009 |
Turnbaugh PJ, Ridaura VK, Faith JJ, Rey FE, Knight R, Gordon JI. The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice. Science Translational Medicine. 1: 6ra14. PMID 20368178 DOI: 10.1126/Scitranslmed.3000322 |
0.828 |
|
| 2009 |
Goodman AL, McNulty NP, Zhao Y, Leip D, Mitra RD, Lozupone CA, Knight R, Gordon JI. Identifying genetic determinants needed to establish a human gut symbiont in its habitat. Cell Host & Microbe. 6: 279-89. PMID 19748469 DOI: 10.1016/J.Chom.2009.08.003 |
0.827 |
|
| 2009 |
Giannakis M, Bäckhed HK, Chen SL, Faith JJ, Wu M, Guruge JL, Engstrand L, Gordon JI. Response of gastric epithelial progenitors to Helicobacter pylori Isolates obtained from Swedish patients with chronic atrophic gastritis. The Journal of Biological Chemistry. 284: 30383-94. PMID 19723631 DOI: 10.1074/Jbc.M109.052738 |
0.543 |
|
| 2009 |
Marco ML, Peters TH, Bongers RS, Molenaar D, van Hemert S, Sonnenburg JL, Gordon JI, Kleerebezem M. Lifestyle of Lactobacillus plantarum in the mouse caecum. Environmental Microbiology. 11: 2747-57. PMID 19638173 DOI: 10.1111/J.1462-2920.2009.02001.X |
0.34 |
|
| 2009 |
Crawford PA, Crowley JR, Sambandam N, Muegge BD, Costello EK, Hamady M, Knight R, Gordon JI. Regulation of myocardial ketone body metabolism by the gut microbiota during nutrient deprivation. Proceedings of the National Academy of Sciences of the United States of America. 106: 11276-81. PMID 19549860 DOI: 10.1073/Pnas.0902366106 |
0.808 |
|
| 2009 |
Turnbaugh PJ, Gordon JI. The core gut microbiome, energy balance and obesity. The Journal of Physiology. 587: 4153-8. PMID 19491241 DOI: 10.1113/Jphysiol.2009.174136 |
0.582 |
|
| 2009 |
Mahowald MA, Rey FE, Seedorf H, Turnbaugh PJ, Fulton RS, Wollam A, Shah N, Wang C, Magrini V, Wilson RK, Cantarel BL, Coutinho PM, Henrissat B, Crock LW, Russell A, ... ... Gordon JI, et al. Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla. Proceedings of the National Academy of Sciences of the United States of America. 106: 5859-64. PMID 19321416 DOI: 10.1073/Pnas.0901529106 |
0.822 |
|
| 2009 |
Turnbaugh PJ, Hamady M, Yatsunenko T, Cantarel BL, Duncan A, Ley RE, Sogin ML, Jones WJ, Roe BA, Affourtit JP, Egholm M, Henrissat B, Heath AC, Knight R, Gordon JI. A core gut microbiome in obese and lean twins. Nature. 457: 480-4. PMID 19043404 DOI: 10.1038/Nature07540 |
0.821 |
|
| 2008 |
Martens EC, Chiang HC, Gordon JI. Mucosal glycan foraging enhances fitness and transmission of a saccharolytic human gut bacterial symbiont. Cell Host & Microbe. 4: 447-57. PMID 18996345 DOI: 10.1016/J.Chom.2008.09.007 |
0.599 |
|
| 2008 |
Samuel BS, Shaito A, Motoike T, Rey FE, Backhed F, Manchester JK, Hammer RE, Williams SC, Crowley J, Yanagisawa M, Gordon JI. Effects of the gut microbiota on host adiposity are modulated by the short-chain fatty-acid binding G protein-coupled receptor, Gpr41. Proceedings of the National Academy of Sciences of the United States of America. 105: 16767-72. PMID 18931303 DOI: 10.1073/Pnas.0808567105 |
0.749 |
|
| 2008 |
Ley RE, Lozupone CA, Hamady M, Knight R, Gordon JI. Worlds within worlds: evolution of the vertebrate gut microbiota. Nature Reviews. Microbiology. 6: 776-88. PMID 18794915 DOI: 10.1038/Nrmicro1978 |
0.336 |
|
| 2008 |
Turnbaugh PJ, Gordon JI. An invitation to the marriage of metagenomics and metabolomics. Cell. 134: 708-13. PMID 18775300 DOI: 10.1016/J.Cell.2008.08.025 |
0.574 |
|
| 2008 |
Ley RE, Hamady M, Lozupone C, Turnbaugh PJ, Ramey RR, Bircher JS, Schlegel ML, Tucker TA, Schrenzel MD, Knight R, Gordon JI. Evolution of mammals and their gut microbes. Science (New York, N.Y.). 320: 1647-51. PMID 18497261 DOI: 10.1126/Science.1155725 |
0.637 |
|
| 2008 |
Turnbaugh PJ, Bäckhed F, Fulton L, Gordon JI. Diet-induced obesity is linked to marked but reversible alterations in the mouse distal gut microbiome. Cell Host & Microbe. 3: 213-23. PMID 18407065 DOI: 10.1016/J.Chom.2008.02.015 |
0.593 |
|
| 2008 |
Giannakis M, Chen SL, Karam SM, Engstrand L, Gordon JI. Helicobacter pylori evolution during progression from chronic atrophic gastritis to gastric cancer and its impact on gastric stem cells. Proceedings of the National Academy of Sciences of the United States of America. 105: 4358-63. PMID 18332421 DOI: 10.1073/Pnas.0800668105 |
0.548 |
|
| 2008 |
Zaneveld J, Turnbaugh PJ, Lozupone C, Ley RE, Hamady M, Gordon JI, Knight R. Host-bacterial coevolution and the search for new drug targets. Current Opinion in Chemical Biology. 12: 109-14. PMID 18280814 DOI: 10.1016/J.Cbpa.2008.01.015 |
0.59 |
|
| 2007 |
Peterson DA, McNulty NP, Guruge JL, Gordon JI. IgA response to symbiotic bacteria as a mediator of gut homeostasis. Cell Host & Microbe. 2: 328-39. PMID 18005754 DOI: 10.1016/j.chom.2007.09.013 |
0.788 |
|
| 2007 |
Turnbaugh PJ, Ley RE, Hamady M, Fraser-Liggett CM, Knight R, Gordon JI. The human microbiome project. Nature. 449: 804-10. PMID 17943116 DOI: 10.1038/Nature06244 |
0.559 |
|
| 2007 |
Xu J, Mahowald MA, Ley RE, Lozupone CA, Hamady M, Martens EC, Henrissat B, Coutinho PM, Minx P, Latreille P, Cordum H, Van Brunt A, Kim K, Fulton RS, Fulton LA, ... ... Gordon JI, et al. Evolution of symbiotic bacteria in the distal human intestine. Plos Biology. 5: e156. PMID 17579514 DOI: 10.1371/Journal.Pbio.0050156 |
0.777 |
|
| 2007 |
Samuel BS, Hansen EE, Manchester JK, Coutinho PM, Henrissat B, Fulton R, Latreille P, Kim K, Wilson RK, Gordon JI. Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut Proceedings of the National Academy of Sciences of the United States of America. 104: 10643-10648. PMID 17563350 DOI: 10.1073/Pnas.0704189104 |
0.756 |
|
| 2007 |
Reigstad CS, Hultgren SJ, Gordon JI. Functional genomic studies of uropathogenic Escherichia coli and host urothelial cells when intracellular bacterial communities are assembled. The Journal of Biological Chemistry. 282: 21259-67. PMID 17504765 DOI: 10.1074/Jbc.M611502200 |
0.784 |
|
| 2007 |
Rawls JF, Mahowald MA, Goodman AL, Trent CM, Gordon JI. In vivo imaging and genetic analysis link bacterial motility and symbiosis in the zebrafish gut. Proceedings of the National Academy of Sciences of the United States of America. 104: 7622-7. PMID 17456593 DOI: 10.1073/Pnas.0702386104 |
0.814 |
|
| 2007 |
Bäckhed F, Crawford PA, O'Donnell D, Gordon JI. Postnatal lymphatic partitioning from the blood vasculature in the small intestine requires fasting-induced adipose factor. Proceedings of the National Academy of Sciences of the United States of America. 104: 606-11. PMID 17202268 DOI: 10.1073/Pnas.0605957104 |
0.572 |
|
| 2006 |
Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, Gordon JI. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature. 444: 1027-31. PMID 17183312 DOI: 10.1038/Nature05414 |
0.78 |
|
| 2006 |
Ley RE, Turnbaugh PJ, Klein S, Gordon JI. Microbial ecology: human gut microbes associated with obesity. Nature. 444: 1022-3. PMID 17183309 DOI: 10.1038/4441022A |
0.547 |
|
| 2006 |
Sonnenburg JL, Chen CT, Gordon JI. Genomic and metabolic studies of the impact of probiotics on a model gut symbiont and host. Plos Biology. 4: e413. PMID 17132046 DOI: 10.1371/Journal.Pbio.0040413 |
0.329 |
|
| 2006 |
Rawls JF, Mahowald MA, Ley RE, Gordon JI. Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection. Cell. 127: 423-33. PMID 17055441 DOI: 10.1016/J.Cell.2006.08.043 |
0.768 |
|
| 2006 |
Bjursell MK, Martens EC, Gordon JI. Functional genomic and metabolic studies of the adaptations of a prominent adult human gut symbiont, Bacteroides thetaiotaomicron, to the suckling period. The Journal of Biological Chemistry. 281: 36269-79. PMID 16968696 DOI: 10.1074/jbc.M606509200 |
0.331 |
|
| 2006 |
Ippolito JE, Merritt ME, Bäckhed F, Moulder KL, Mennerick S, Manchester JK, Gammon ST, Piwnica-Worms D, Gordon JI. Linkage between cellular communications, energy utilization, and proliferation in metastatic neuroendocrine cancers. Proceedings of the National Academy of Sciences of the United States of America. 103: 12505-10. PMID 16895983 DOI: 10.1073/Pnas.0605207103 |
0.585 |
|
| 2006 |
Oh JD, Kling-Bäckhed H, Giannakis M, Xu J, Fulton RS, Fulton LA, Cordum HS, Wang C, Elliott G, Edwards J, Mardis ER, Engstrand LG, Gordon JI. The complete genome sequence of a chronic atrophic gastritis Helicobacter pylori strain: evolution during disease progression. Proceedings of the National Academy of Sciences of the United States of America. 103: 9999-10004. PMID 16788065 DOI: 10.1073/Pnas.0603784103 |
0.546 |
|
| 2006 |
Samuel BS, Gordon JI. A humanized gnotobiotic mouse model of host-archaeal-bacterial mutualism. Proceedings of the National Academy of Sciences of the United States of America. 103: 10011-6. PMID 16782812 DOI: 10.1073/Pnas.0602187103 |
0.714 |
|
| 2006 |
Gill SR, Pop M, Deboy RT, Eckburg PB, Turnbaugh PJ, Samuel BS, Gordon JI, Relman DA, Fraser-Liggett CM, Nelson KE. Metagenomic analysis of the human distal gut microbiome. Science (New York, N.Y.). 312: 1355-9. PMID 16741115 DOI: 10.1126/Science.1124234 |
0.784 |
|
| 2006 |
Sonnenburg ED, Sonnenburg JL, Manchester JK, Hansen EE, Chiang HC, Gordon JI. A hybrid two-component system protein of a prominent human gut symbiont couples glycan sensing in vivo to carbohydrate metabolism. Proceedings of the National Academy of Sciences of the United States of America. 103: 8834-9. PMID 16735464 DOI: 10.1073/Pnas.0603249103 |
0.577 |
|
| 2006 |
Chen SL, Hung CS, Xu J, Reigstad CS, Magrini V, Sabo A, Blasiar D, Bieri T, Meyer RR, Ozersky P, Armstrong JR, Fulton RS, Latreille JP, Spieth J, Hooton TM, ... ... Gordon JI, et al. Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach. Proceedings of the National Academy of Sciences of the United States of America. 103: 5977-82. PMID 16585510 DOI: 10.1073/Pnas.0600938103 |
0.776 |
|
| 2006 |
Giannakis M, Stappenbeck TS, Mills JC, Leip DG, Lovett M, Clifton SW, Ippolito JE, Glasscock JI, Arumugam M, Brent MR, Gordon JI. Molecular properties of adult mouse gastric and intestinal epithelial progenitors in their niches. The Journal of Biological Chemistry. 281: 11292-300. PMID 16464855 DOI: 10.1074/Jbc.M512118200 |
0.796 |
|
| 2006 |
Oh JD, Kling-Bäckhed H, Giannakis M, Engstrand LG, Gordon JI. Interactions between gastric epithelial stem cells and Helicobacter pylori in the setting of chronic atrophic gastritis. Current Opinion in Microbiology. 9: 21-7. PMID 16406776 DOI: 10.1016/J.Mib.2005.12.013 |
0.522 |
|
| 2006 |
Zhang X, Stappenbeck TS, White AC, Lavine KJ, Gordon JI, Ornitz DM. Reciprocal epithelial-mesenchymal FGF signaling is required for cecal development. Development (Cambridge, England). 133: 173-80. PMID 16308329 DOI: 10.1242/Dev.02175 |
0.618 |
|
| 2006 |
Bäckhed F, Ley RE, Sonnenburg JL, Gordon JI. The human intestinal microbiota and its relationship to energy balance Scandinavian Journal of Food and Nutrition. 50: 121-123. DOI: 10.1080/17482970601066546 |
0.323 |
|
| 2005 |
Crawford PA, Gordon JI. Microbial regulation of intestinal radiosensitivity. Proceedings of the National Academy of Sciences of the United States of America. 102: 13254-9. PMID 16129828 DOI: 10.1073/Pnas.0504830102 |
0.601 |
|
| 2005 |
Ley RE, Bäckhed F, Turnbaugh P, Lozupone CA, Knight RD, Gordon JI. Obesity alters gut microbial ecology. Proceedings of the National Academy of Sciences of the United States of America. 102: 11070-5. PMID 16033867 DOI: 10.1073/Pnas.0504978102 |
0.611 |
|
| 2005 |
Ippolito JE, Xu J, Jain S, Moulder K, Mennerick S, Crowley JR, Townsend RR, Gordon JI. An integrated functional genomics and metabolomics approach for defining poor prognosis in human neuroendocrine cancers. Proceedings of the National Academy of Sciences of the United States of America. 102: 9901-6. PMID 15998737 DOI: 10.1073/Pnas.0500756102 |
0.599 |
|
| 2005 |
Sonnenburg JL, Xu J, Leip DD, Chen CH, Westover BP, Weatherford J, Buhler JD, Gordon JI. Glycan foraging in vivo by an intestine-adapted bacterial symbiont. Science (New York, N.Y.). 307: 1955-9. PMID 15790854 DOI: 10.1126/Science.1109051 |
0.306 |
|
| 2005 |
Bäckhed F, Ley RE, Sonnenburg JL, Peterson DA, Gordon JI. Host-bacterial mutualism in the human intestine. Science (New York, N.Y.). 307: 1915-20. PMID 15790844 DOI: 10.1126/Science.1104816 |
0.334 |
|
| 2005 |
Pull SL, Doherty JM, Mills JC, Gordon JI, Stappenbeck TS. Activated macrophages are an adaptive element of the colonic epithelial progenitor niche necessary for regenerative responses to injury. Proceedings of the National Academy of Sciences of the United States of America. 102: 99-104. PMID 15615857 DOI: 10.1073/Pnas.0405979102 |
0.677 |
|
| 2004 |
Bäckhed F, Ding H, Wang T, Hooper LV, Koh GY, Nagy A, Semenkovich CF, Gordon JI. The gut microbiota as an environmental factor that regulates fat storage. Proceedings of the National Academy of Sciences of the United States of America. 101: 15718-23. PMID 15505215 DOI: 10.1073/Pnas.0407076101 |
0.658 |
|
| 2004 |
Rawls JF, Samuel BS, Gordon JI. Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota. Proceedings of the National Academy of Sciences of the United States of America. 101: 4596-601. PMID 15070763 DOI: 10.1073/Pnas.0400706101 |
0.755 |
|
| 2004 |
Syder AJ, Karam SM, Mills JC, Ippolito JE, Ansari HR, Farook V, Gordon JI. A transgenic mouse model of metastatic carcinoma involving transdifferentiation of a gastric epithelial lineage progenitor to a neuroendocrine phenotype. Proceedings of the National Academy of Sciences of the United States of America. 101: 4471-6. PMID 15070742 DOI: 10.1073/Pnas.0307983101 |
0.794 |
|
| 2004 |
Björkholm B, Guruge J, Karlsson M, O'Donnell D, Engstrand L, Falk P, Gordon J. Gnotobiotic transgenic mice reveal that transmission of Helicobacter pylori is facilitated by loss of acid-producing parietal cells in donors and recipients. Microbes and Infection. 6: 213-20. PMID 14998521 DOI: 10.1016/J.Micinf.2003.11.008 |
0.368 |
|
| 2004 |
Xu J, Chiang HC, Bjursell MK, Gordon JI. Message from a human gut symbiont: sensitivity is a prerequisite for sharing. Trends in Microbiology. 12: 21-8. PMID 14700548 DOI: 10.1016/J.Tim.2003.11.007 |
0.598 |
|
| 2003 |
Mills JC, Andersson N, Stappenbeck TS, Chen CC, Gordon JI. Molecular characterization of mouse gastric zymogenic cells. The Journal of Biological Chemistry. 278: 46138-45. PMID 12963718 DOI: 10.1074/Jbc.M308385200 |
0.655 |
|
| 2003 |
Xu J, Gordon JI. Honor thy symbionts. Proceedings of the National Academy of Sciences of the United States of America. 100: 10452-9. PMID 12923294 DOI: 10.1073/pnas.1734063100 |
0.353 |
|
| 2003 |
Gordon JI, Stappenbeck TS, Hooper LV. Response from Jeffrey I. Gordon et al.: Commensal bacteria make a difference. Trends in Microbiology. 11: 150-1. PMID 12706987 DOI: 10.1016/S0966-842X(03)00044-1 |
0.75 |
|
| 2003 |
Xu J, Bjursell MK, Himrod J, Deng S, Carmichael LK, Chiang HC, Hooper LV, Gordon JI. A genomic view of the human-Bacteroides thetaiotaomicron symbiosis. Science (New York, N.Y.). 299: 2074-6. PMID 12663928 DOI: 10.1126/Science.1080029 |
0.75 |
|
| 2003 |
Syder AJ, Oh JD, Guruge JL, O'Donnell D, Karlsson M, Mills JC, Björkholm BM, Gordon JI. The impact of parietal cells on Helicobacter pylori tropism and host pathology: an analysis using gnotobiotic normal and transgenic mice. Proceedings of the National Academy of Sciences of the United States of America. 100: 3467-72. PMID 12629225 DOI: 10.1073/Pnas.0230380100 |
0.741 |
|
| 2003 |
Stappenbeck TS, Mills JC, Gordon JI. Molecular features of adult mouse small intestinal epithelial progenitors. Proceedings of the National Academy of Sciences of the United States of America. 100: 1004-9. PMID 12552106 DOI: 10.1073/Pnas.242735899 |
0.68 |
|
| 2003 |
Hooper LV, Stappenbeck TS, Hong CV, Gordon JI. Angiogenins: a new class of microbicidal proteins involved in innate immunity. Nature Immunology. 4: 269-73. PMID 12548285 DOI: 10.1038/Ni888 |
0.776 |
|
| 2002 |
Stappenbeck TS, Hooper LV, Gordon JI. Developmental regulation of intestinal angiogenesis by indigenous microbes via Paneth cells. Proceedings of the National Academy of Sciences of the United States of America. 99: 15451-5. PMID 12432102 DOI: 10.1073/Pnas.202604299 |
0.781 |
|
| 2002 |
Stappenbeck TS, Hooper LV, Manchester JK, Wong MH, Gordon JI. Laser capture microdissection of mouse intestine: characterizing mRNA and protein expression, and profiling intermediary metabolism in specified cell populations. Methods in Enzymology. 356: 167-96. PMID 12418197 DOI: 10.1016/S0076-6879(02)56932-9 |
0.746 |
|
| 2002 |
Mills JC, Andersson N, Hong CV, Stappenbeck TS, Gordon JI. Molecular characterization of mouse gastric epithelial progenitor cells. Proceedings of the National Academy of Sciences of the United States of America. 99: 14819-24. PMID 12409607 DOI: 10.1073/Pnas.192574799 |
0.663 |
|
| 2002 |
Hu Y, Ippolito JE, Garabedian EM, Humphrey PA, Gordon JI. Molecular characterization of a metastatic neuroendocrine cell cancer arising in the prostates of transgenic mice. The Journal of Biological Chemistry. 277: 44462-74. PMID 12228243 DOI: 10.1074/Jbc.M205784200 |
0.784 |
|
| 2002 |
Mysorekar IU, Lorenz RG, Gordon JI. A gnotobiotic transgenic mouse model for studying interactions between small intestinal enterocytes and intraepithelial lymphocytes. The Journal of Biological Chemistry. 277: 37811-9. PMID 12138109 DOI: 10.1074/Jbc.M205300200 |
0.618 |
|
| 2002 |
Björkholm BM, Guruge JL, Oh JD, Syder AJ, Salama N, Guillemin K, Falkow S, Nilsson C, Falk PG, Engstrand L, Gordon JI. Colonization of germ-free transgenic mice with genotyped Helicobacter pylori strains from a case-control study of gastric cancer reveals a correlation between host responses and HsdS components of type I restriction-modification systems. The Journal of Biological Chemistry. 277: 34191-7. PMID 12105196 DOI: 10.1074/Jbc.M203613200 |
0.736 |
|
| 2002 |
Hooper LV, Midtvedt T, Gordon JI. How host-microbial interactions shape the nutrient environment of the mammalian intestine. Annual Review of Nutrition. 22: 283-307. PMID 12055347 DOI: 10.1146/annurev.nutr.22.011602.092259 |
0.677 |
|
| 2002 |
Song SK, Qu Z, Garabedian EM, Gordon JI, Milbrandt J, Ackerman JJ. Improved magnetic resonance imaging detection of prostate cancer in a transgenic mouse model. Cancer Research. 62: 1555-8. PMID 11888935 |
0.758 |
|
| 2002 |
Kopan R, Lee J, Lin MH, Syder AJ, Kesterson J, Crutchfield N, Li CR, Wu W, Books J, Gordon JI. Genetic mosaic analysis indicates that the bulb region of coat hair follicles contains a resident population of several active multipotent epithelial lineage progenitors. Developmental Biology. 242: 44-57. PMID 11795939 DOI: 10.1006/Dbio.2001.0516 |
0.707 |
|
| 2002 |
Jacobsen CM, Narita N, Bielinska M, Syder AJ, Gordon JI, Wilson DB. Genetic mosaic analysis reveals that GATA-4 is required for proper differentiation of mouse gastric epithelium. Developmental Biology. 241: 34-46. PMID 11784093 DOI: 10.1006/Dbio.2001.0424 |
0.719 |
|
| 2002 |
Mysorekar IU, Mulvey MA, Hultgren SJ, Gordon JI. Molecular regulation of urothelial renewal and host defenses during infection with uropathogenic Escherichia coli. The Journal of Biological Chemistry. 277: 7412-9. PMID 11744708 DOI: 10.1074/Jbc.M110560200 |
0.602 |
|
| 2002 |
Hooper LV, Mills JC, Roth KA, Stappenbeck TS, Wong MH, Gordon JI. 29 Combining gnotobiotic mouse models with functional genomics to define the impact of the microflora on host physiology Methods in Microbiology. 31: 559-589. DOI: 10.1016/S0580-9517(02)31030-4 |
0.705 |
|
| 2001 |
Mills JC, Syder AJ, Hong CV, Guruge JL, Raaii F, Gordon JI. A molecular profile of the mouse gastric parietal cell with and without exposure to Helicobacter pylori. Proceedings of the National Academy of Sciences of the United States of America. 98: 13687-92. PMID 11717430 DOI: 10.1073/Pnas.231332398 |
0.721 |
|
| 2001 |
Farazi TA, Waksman G, Gordon JI. The biology and enzymology of protein N-myristoylation. The Journal of Biological Chemistry. 276: 39501-4. PMID 11527981 DOI: 10.1074/Jbc.R100042200 |
0.64 |
|
| 2001 |
Farazi TA, Manchester JK, Waksman G, Gordon JI. Pre-steady-state kinetic studies of Saccharomyces cerevisiae myristoylCoA:protein N-myristoyltransferase mutants identify residues involved in catalysis. Biochemistry. 40: 9177-86. PMID 11478885 DOI: 10.1021/Bi0107997 |
0.657 |
|
| 2001 |
Farazi TA, Waksman G, Gordon JI. Structures of Saccharomyces cerevisiae N-myristoyltransferase with bound myristoylCoA and peptide provide insights about substrate recognition and catalysis. Biochemistry. 40: 6335-43. PMID 11371195 DOI: 10.1021/Bi0101401 |
0.655 |
|
| 2001 |
Hooper LV, Gordon JI. Commensal host-bacterial relationships in the gut. Science (New York, N.Y.). 292: 1115-8. PMID 11352068 DOI: 10.1126/science.1058709 |
0.304 |
|
| 2001 |
Hooper LV, Gordon JI. Glycans as legislators of host-microbial interactions: spanning the spectrum from symbiosis to pathogenicity. Glycobiology. 11: 1R-10R. PMID 11287395 DOI: 10.1093/glycob/11.2.1R |
0.303 |
|
| 2001 |
Fütterer K, Murray CL, Bhatnagar RS, Gokel GW, Gordon JI, Waksman G. Crystallographic phasing of myristoyl-CoA-protein N-myristoyltransferase using an iodinated analog of myristoyl-CoA. Acta Crystallographica. Section D, Biological Crystallography. 57: 393-400. PMID 11223516 DOI: 10.1107/S090744490100052X |
0.531 |
|
| 2001 |
Hooper LV, Wong MH, Thelin A, Hansson L, Falk PG, Gordon JI. Molecular analysis of commensal host-microbial relationships in the intestine. Science (New York, N.Y.). 291: 881-4. PMID 11157169 DOI: 10.1126/science.291.5505.881 |
0.349 |
|
| 2001 |
Bhatnagar RS, Ashrafi K, Fütterer K, Waksman G, Gordon JI. 9 Biology and enzymology of protein N-myristoylation Enzymes. 21: 241-290. DOI: 10.1016/S1874-6047(01)80022-6 |
0.699 |
|
| 2001 |
Syder AJ, Gordon JI. Nearly Twenty Years after Barry Marshall's Big Gulp Cell. 107: 282-284. DOI: 10.1016/S0092-8674(01)00560-8 |
0.742 |
|
| 2000 |
Farazi TA, Manchester JK, Gordon JI. Transient-state kinetic analysis of Saccharomyces cerevisiae myristoylCoA:protein N-myristoyltransferase reveals that a step after chemical transformation is rate limiting. Biochemistry. 39: 15807-16. PMID 11123906 DOI: 10.1021/Bi002074T |
0.652 |
|
| 2000 |
Falk PG, Syder AJ, Guruge JL, Kirschner D, Blaser MJ, Gordon JI. Theoretical and experimental approaches for studying factors defining the Helicobacter pylori-host relationship. Trends in Microbiology. 8: 321-9. PMID 10878767 DOI: 10.1016/S0966-842X(00)01780-7 |
0.727 |
|
| 1999 |
Bhatnagar RS, Fütterer K, Waksman G, Gordon JI. The structure of myristoyl-CoA:protein N-myristoyltransferase. Biochimica Et Biophysica Acta. 1441: 162-72. PMID 10570244 DOI: 10.1016/S1388-1981(99)00155-9 |
0.548 |
|
| 1999 |
Ashrafi K, Sinclair D, Gordon JI, Guarente L. Passage through stationary phase advances replicative aging in Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences of the United States of America. 96: 9100-5. PMID 10430902 DOI: 10.1073/Pnas.96.16.9100 |
0.558 |
|
| 1999 |
Syder AJ, Guruge JL, Li Q, Hu Y, Oleksiewicz CM, Lorenz RG, Karam SM, Falk PG, Gordon JI. Helicobacter pylori attaches to NeuAc alpha 2,3Gal beta 1,4 glycoconjugates produced in the stomach of transgenic mice lacking parietal cells. Molecular Cell. 3: 263-74. PMID 10198629 DOI: 10.1016/S1097-2765(00)80454-2 |
0.711 |
|
| 1998 |
Stappenbeck TS, Wong MH, Saam JR, Mysorekar IU, Gordon JI. Notes from some crypt watchers: regulation of renewal in the mouse intestinal epithelium. Current Opinion in Cell Biology. 10: 702-9. PMID 9914172 DOI: 10.1016/S0955-0674(98)80110-5 |
0.748 |
|
| 1998 |
Garabedian EM, Humphrey PA, Gordon JI. A transgenic mouse model of metastatic prostate cancer originating from neuroendocrine cells. Proceedings of the National Academy of Sciences of the United States of America. 95: 15382-7. PMID 9860977 DOI: 10.1073/Pnas.95.26.15382 |
0.764 |
|
| 1998 |
Bhatnagar RS, Fütterer K, Farazi TA, Korolev S, Murray CL, Jackson-Machelski E, Gokel GW, Gordon JI, Waksman G. Structure of N-myristoyltransferase with bound myristoylCoA and peptide substrate analogs. Nature Structural Biology. 5: 1091-7. PMID 9846880 DOI: 10.1038/4202 |
0.739 |
|
| 1998 |
Ashrafi K, Farazi TA, Gordon JI. A role for Saccharomyces cerevisiae fatty acid activation protein 4 in regulating protein N-myristoylation during entry into stationary phase. The Journal of Biological Chemistry. 273: 25864-74. PMID 9748261 DOI: 10.1074/Jbc.273.40.25864 |
0.759 |
|
| 1998 |
Hooper LV, Bry L, Falk PG, Gordon JI. Host-microbial symbiosis in the mammalian intestine: exploring an internal ecosystem. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 20: 336-43. PMID 9619105 DOI: 10.1002/(SICI)1521-1878(199804)20:4<336::AID-BIES10>3.0.CO;2-3 |
0.308 |
|
| 1998 |
Falk PG, Hooper LV, Midtvedt T, Gordon JI. Creating and Maintaining the Gastrointestinal Ecosystem: What We Know and Need To Know from Gnotobiology Microbiology and Molecular Biology Reviews. 62: 1157-1170. DOI: 10.1128/mmbr.62.4.1157-1170.1998 |
0.327 |
|
| 1997 |
Bhatnagar RS, Gordon JI. Understanding covalent modifications of proteins by lipids: where cell biology and biophysics mingle. Trends in Cell Biology. 7: 14-20. PMID 17708893 DOI: 10.1016/S0962-8924(97)10044-7 |
0.539 |
|
| 1997 |
Garabedian EM, Roberts LJ, McNevin MS, Gordon JI. Examining the role of Paneth cells in the small intestine by lineage ablation in transgenic mice. The Journal of Biological Chemistry. 272: 23729-40. PMID 9295317 DOI: 10.1074/Jbc.272.38.23729 |
0.796 |
|
| 1997 |
Bhatnagar RS, Schall OF, Jackson-Machelski E, Sikorski JA, Devadas B, Gokel GW, Gordon JI. Titration calorimetric analysis of AcylCoA recognition by myristoylCoA:protein N-myristoyltransferase. Biochemistry. 36: 6700-8. PMID 9184150 DOI: 10.1021/Bi970311V |
0.551 |
|
| 1996 |
Wong MH, Hermiston ML, Syder AJ, Gordon JI. Forced expression of the tumor suppressor adenomatosis polyposis coli protein induces disordered cell migration in the intestinal epithelium. Proceedings of the National Academy of Sciences of the United States of America. 93: 9588-93. PMID 8790374 DOI: 10.1073/Pnas.93.18.9588 |
0.73 |
|
| 1995 |
Hermiston ML, Gordon J. In vivo analysis of cadherin function in the mouse intestinal epithelium: essential roles in adhesion, maintenance of differentiation, and regulation of programmed cell death. Journal of Cell Biology. 129: 489-506. PMID 7721948 DOI: 10.1083/Jcb.129.2.489 |
0.35 |
|
| 1995 |
Bhatnagar RS, Gordon JI. Thermodynamic studies of myristoyl-CoA: protein N-myristoyltransferase using isothermal titration calorimetry. Methods in Enzymology. 250: 467-86. PMID 7651172 DOI: 10.1016/0076-6879(95)50091-X |
0.54 |
|
| 1994 |
Bhatnagar RS, Jackson-Machelski E, McWherter CA, Gordon JI. Isothermal titration calorimetric studies of Saccharomyces cerevisiae myristoyl-CoA:protein N-myristoyltransferase. Determinants of binding energy and catalytic discrimination among acyl-CoA and peptide ligands. The Journal of Biological Chemistry. 269: 11045-53. PMID 8157630 |
0.536 |
|
| 1994 |
Rubin DC, Swietlicki E, Gordon JI. Use of isografts to study proliferation and differentiation programs of mouse stomach epithelia. The American Journal of Physiology. 267: G27-39. PMID 8048529 DOI: 10.1152/Ajpgi.1994.267.1.G27 |
0.317 |
|
| 1994 |
Falk P, Roth KA, Gordon JI. Lectins are sensitive tools for defining the differentiation programs of mouse gut epithelial cell lineages. The American Journal of Physiology. 266: G987-1003. PMID 8023947 DOI: 10.1152/Ajpgi.1994.266.6.G987 |
0.384 |
|
| 1994 |
Johnson DR, Bhatnagar RS, Knoll LJ, Gordon JI. Genetic and biochemical studies of protein N-myristoylation. Annual Review of Biochemistry. 63: 869-914. PMID 7979256 DOI: 10.1146/Annurev.Bi.63.070194.004253 |
0.539 |
|
| 1993 |
Falk P, Roth KA, Borén T, Westblom TU, Gordon JI, Normark S. An in vitro adherence assay reveals that Helicobacter pylori exhibits cell lineage-specific tropism in the human gastric epithelium. Proceedings of the National Academy of Sciences of the United States of America. 90: 2035-9. PMID 8383333 DOI: 10.1073/Pnas.90.5.2035 |
0.309 |
|
| 1992 |
Duronio RJ, Gordon JI, Boguski MS. Comparative analysis of the beta transducin family with identification of several new members including PWP1, a nonessential gene of Saccharomyces cerevisiae that is divergently transcribed from NMT1. Proteins. 13: 41-56. PMID 1594577 DOI: 10.1002/Prot.340130105 |
0.56 |
|
| 1992 |
Duronio RJ, Knoll LJ, Gordon JI. Isolation of a Saccharomyces cerevisiae long chain fatty acyl:CoA synthetase gene (FAA1) and assessment of its role in protein N-myristoylation. The Journal of Cell Biology. 117: 515-29. PMID 1572893 DOI: 10.1083/Jcb.117.3.515 |
0.567 |
|
| 1992 |
Duronio RJ, Reed SI, Gordon JI. Mutations of human myristoyl-CoA:protein N-myristoyltransferase cause temperature-sensitive myristic acid auxotrophy in Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences of the United States of America. 89: 4129-33. PMID 1570339 DOI: 10.1073/Pnas.89.9.4129 |
0.571 |
|
| 1992 |
Roth KA, Cohn SM, Rubin DC, Trahair JF, Neutra MR, Gordon JI. Regulation of gene expression in gastric epithelial cell populations of fetal, neonatal, and adult transgenic mice. The American Journal of Physiology. 263: G186-97. PMID 1514630 DOI: 10.1152/Ajpgi.1992.263.2.G186 |
0.342 |
|
| 1992 |
Roth KA, Kim S, Gordon JI. Immunocytochemical studies suggest two pathways for enteroendocrine cell differentiation in the colon. The American Journal of Physiology. 263: G174-80. PMID 1514628 DOI: 10.1152/Ajpgi.1992.263.2.G174 |
0.341 |
|
| 1991 |
Duronio RJ, Rudnick DA, Johnson RL, Johnson DR, Gordon JI. Myristic acid auxotrophy caused by mutation of S. cerevisiae myristoyl-CoA:protein N-myristoyltransferase. The Journal of Cell Biology. 113: 1313-30. PMID 2045414 DOI: 10.1083/Jcb.113.6.1313 |
0.534 |
|
| 1991 |
Bryant ML, Ratner L, Duronio RJ, Kishore NS, Devadas B, Adams SP, Gordon JI. Incorporation of 12-methoxydodecanoate into the human immunodeficiency virus 1 gag polyprotein precursor inhibits its proteolytic processing and virus production in a chronically infected human lymphoid cell line. Proceedings of the National Academy of Sciences of the United States of America. 88: 2055-9. PMID 2006142 DOI: 10.1073/Pnas.88.6.2055 |
0.531 |
|
| 1991 |
Hansbrough JR, Lublin DM, Roth KA, Birkenmeier EA, Gordon JI. Expression of a liver fatty acid binding protein/human decay-accelerating factor/HLA-B44 chimeric gene in transgenic mice. The American Journal of Physiology. 260: G929-39. PMID 1711781 DOI: 10.1152/Ajpgi.1991.260.6.G929 |
0.391 |
|
| 1990 |
Duronio RJ, Jackson-Machelski E, Heuckeroth RO, Olins PO, Devine CS, Yonemoto W, Slice LW, Taylor SS, Gordon JI. Protein N-myristoylation in Escherichia coli: reconstitution of a eukaryotic protein modification in bacteria. Proceedings of the National Academy of Sciences of the United States of America. 87: 1506-10. PMID 2406721 DOI: 10.1073/Pnas.87.4.1506 |
0.567 |
|
| 1990 |
Duronio RJ, Rudnick DA, Johnson RL, Linder ME, Gordon JI. Reconstitution of protein N-myristoylation in Escherichia coli Methods. 1: 253-263. DOI: 10.1016/S1046-2023(05)80325-1 |
0.547 |
|
| 1989 |
Duronio RJ, Towler DA, Heuckeroth RO, Gordon JI. Disruption of the yeast N-myristoyl transferase gene causes recessive lethality. Science (New York, N.Y.). 243: 796-800. PMID 2644694 DOI: 10.1126/Science.2644694 |
0.577 |
|
| 1980 |
Wiskocil R, Bensky P, Dower W, Goldberger RF, Gordon JI, Deeley RG. Coordinate regulation of two estrogen-dependent genes in avian liver Proceedings of the National Academy of Sciences of the United States of America. 77: 4474-4478. PMID 6933498 |
0.613 |
|
| 1978 |
Burns ATH, Deeley RG, Gordon JI, Udell DS, Mullinix KP, Goldberger RF. Primary induction of vitellogenin mRNA in the rooster by 17β-estradiol Proceedings of the National Academy of Sciences of the United States of America. 75: 1815-1819. PMID 273910 DOI: 10.1073/Pnas.75.4.1815 |
0.589 |
|
| 1976 |
Mullinix KP, Wetekam W, Deeley RG, Gordon JI, Meyers M, Kent KA, Goldberger RF. Induction of vitellogenin synthesis by estrogen in avian liver: relationship between level of vitellogenin mRNA and vitellogenin synthesis Proceedings of the National Academy of Sciences of the United States of America. 73: 1442-1446. PMID 1064017 DOI: 10.1073/Pnas.73.5.1442 |
0.58 |
|
| Show low-probability matches. |