Judith E. Kimble - Publications

Affiliations: 
University of Wisconsin, Madison, Madison, WI 
Area:
Molecular Biology, Biochemistry
Website:
https://biochem.wisc.edu/faculty/kimble

166 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Carrick BH, Crittenden SL, Chen F, Linsley M, Woodworth J, Kroll-Conner P, Ferdous AS, Keleş S, Wickens M, Kimble J. PUF partner interactions at a conserved interface shape the RNA-binding landscape and cell fate in Caenorhabditis elegans. Developmental Cell. PMID 38290520 DOI: 10.1016/j.devcel.2024.01.005  0.335
2023 Ferdous AS, Lynch TR, Costa Dos Santos SJ, Kapadia DH, Crittenden SL, Kimble J. LST-1 is a bifunctional regulator that feeds back on Notch-dependent transcription to regulate germline stem cells. Proceedings of the National Academy of Sciences of the United States of America. 120: e2309964120. PMID 37729202 DOI: 10.1073/pnas.2309964120  0.403
2023 Crittenden SL, Seidel HS, Kimble J. Analysis of the C. elegans Germline Stem Cell Pool. Methods in Molecular Biology (Clifton, N.J.). 2677: 1-36. PMID 37464233 DOI: 10.1007/978-1-0716-3259-8_1  0.376
2023 Ferdous AS, Costa Dos Santos SJ, Kanzler CR, Shin H, Carrick BH, Crittenden SL, Wickens M, Kimble J. The in vivo functional significance of PUF hub partnerships in C. elegans germline stem cells. Development (Cambridge, England). PMID 37070766 DOI: 10.1242/dev.201705  0.371
2023 Ferdous AS, Costa Dos Santos SJ, Kanzler CR, Shin H, Carrick BH, Crittenden SL, Wickens M, Kimble J. Functional significance of PUF partnerships in germline stem cells. Biorxiv : the Preprint Server For Biology. PMID 36824876 DOI: 10.1101/2023.02.15.528708  0.354
2022 Lee C, Lynch T, Crittenden SL, Kimble J. Image-Based Single-Molecule Analysis of Notch-Dependent Transcription in Its Natural Context. Methods in Molecular Biology (Clifton, N.J.). 2472: 131-149. PMID 35674897 DOI: 10.1007/978-1-0716-2201-8_11  0.316
2022 Lynch TR, Xue M, Czerniak CW, Lee C, Kimble J. Notch-dependent DNA cis-regulatory elements and their dose-dependent control of C. elegans stem cell self-renewal. Development (Cambridge, England). 149. PMID 35394007 DOI: 10.1242/dev.200332  0.306
2021 Robinson-Thiewes S, Kershner AM, Shin H, Haupt KA, Kroll-Connor P, Kimble J. A sensitized genetic screen to identify regulators of Caenorhabditis elegans germline stem cells. G3 (Bethesda, Md.). PMID 35100350 DOI: 10.1093/g3journal/jkab439  0.761
2021 Robinson-Thiewes S, Dufour B, Martel PO, Lechasseur X, Brou AAD, Roy V, Chen Y, Kimble J, Narbonne P. Non-autonomous regulation of germline stem cell proliferation by somatic MPK-1/MAPK activity in C. elegans. Cell Reports. 35: 109162. PMID 34038716 DOI: 10.1016/j.celrep.2021.109162  0.327
2021 Doenier J, Lynch T, Kimble J, Aoki ST. An improved in vivo tethering assay with single molecule FISH reveals that a nematode Nanos enhances reporter expression and mRNA stability. Rna (New York, N.Y.). PMID 33727224 DOI: 10.1261/rna.078693.121  0.331
2020 Robinson-Thiewes S, McCloskey J, Kimble J. Two classes of active transcription sites and their roles in developmental regulation. Proceedings of the National Academy of Sciences of the United States of America. 117: 26812-26821. PMID 33033228 DOI: 10.1073/pnas.2013163117  0.324
2019 Haupt KA, Law KT, Enright AL, Kanzler CR, Shin H, Wickens M, Kimble J. A PUF Hub Drives Self-Renewal in Germline Stem Cells. Genetics. PMID 31740451 DOI: 10.1534/Genetics.119.302772  0.484
2019 Haupt KA, Enright AL, Ferdous AS, Kershner AM, Shin H, Wickens M, Kimble J. The molecular basis of LST-1 self-renewal activity and its control of stem cell pool size. Development (Cambridge, England). PMID 31515205 DOI: 10.1242/Dev.181644  0.805
2019 Lee C, Shin H, Kimble J. Dynamics of Notch-Dependent Transcriptional Bursting in Its Native Context. Developmental Cell. PMID 31378588 DOI: 10.1016/J.Devcel.2019.07.001  0.401
2019 Crittenden SL, Lee C, Mohanty I, Battula S, Knobel K, Kimble J. Sexual dimorphism of niche architecture and regulation of the germline stem cell pool. Molecular Biology of the Cell. mbcE19030164. PMID 31067147 DOI: 10.1091/Mbc.E19-03-0164  0.403
2019 Preston MA, Porter DF, Chen F, Buter N, Lapointe CP, Keles S, Kimble J, Wickens M. Unbiased screen of RNA tailing activities reveals a poly(UG) polymerase. Nature Methods. PMID 30988468 DOI: 10.1038/S41592-019-0370-6  0.322
2018 Porter DF, Prasad A, Carrick BH, Kroll-Conner P, Wickens M, Kimble J. Towards Identifying Subnetworks from FBF Binding Landscapes in Spermatogenic or Oogenic Germlines. G3 (Bethesda, Md.). PMID 30459181 DOI: 10.1534/G3.118.200300  0.424
2018 Seidel HS, Smith TA, Evans JK, Stamper JQ, Mast TG, Kimble J. C. elegans germ cells divide and differentiate in a folded tissue. Developmental Biology. PMID 30030982 DOI: 10.1016/J.Ydbio.2018.07.013  0.447
2018 Aoki ST, Porter DF, Prasad A, Wickens M, Bingman CA, Kimble J. An RNA-Binding Multimer Specifies Nematode Sperm Fate. Cell Reports. 23: 3769-3775. PMID 29949762 DOI: 10.1016/J.Celrep.2018.05.095  0.451
2017 Shin H, Haupt KA, Kershner AM, Kroll-Conner P, Wickens M, Kimble J. SYGL-1 and LST-1 link niche signaling to PUF RNA repression for stem cell maintenance in Caenorhabditis elegans. Plos Genetics. 13: e1007121. PMID 29232700 DOI: 10.1371/Journal.Pgen.1007121  0.8
2017 Crittenden SL, Seidel HS, Kimble J. Analysis of the C. elegans Germline Stem Cell Pool. Methods in Molecular Biology (Clifton, N.J.). 1463: 1-33. PMID 27734344 DOI: 10.1007/978-1-4939-4017-2_1  0.369
2016 Lee C, Sorensen EB, Lynch TR, Kimble J. C. elegans GLP-1/Notch activates transcription in a probability gradient across the germline stem cell pool. Elife. 5. PMID 27705743 DOI: 10.7554/Elife.18370  0.45
2016 Prasad A, Porter DF, Kroll-Conner PL, Mohanty I, Ryan AR, Crittenden SL, Wickens M, Kimble J. The PUF binding landscape in metazoan germ cells. Rna (New York, N.Y.). PMID 27165521 DOI: 10.1261/Rna.055871.116  0.475
2016 Aoki ST, Kershner AM, Bingman CA, Wickens M, Kimble J. PGL germ granule assembly protein is a base-specific, single-stranded RNase. Proceedings of the National Academy of Sciences of the United States of America. PMID 26787882 DOI: 10.1073/Pnas.1524400113  0.769
2016 Lee C, Sorensen EB, Lynch TR, Kimble J. Author response: C. elegans GLP-1/Notch activates transcription in a probability gradient across the germline stem cell pool Elife. DOI: 10.7554/Elife.18370.019  0.408
2016 Sorensen EB, Lee CL, Sorokin E, Groth AC, Kimble J. Abstract IA11:C. elegansGLP-1/Notch signaling: Direct targets and visualization in stem cells Molecular Cancer Research. 14. DOI: 10.1158/1557-3125.Devbiolca15-Ia11  0.764
2015 Noble D, Aoki ST, Ortiz MA, Kim KW, Verheyden JM, Kimble J. Genomic Analyses of Sperm Fate Regulator Targets Reveal a Common Set of Oogenic mRNAs in Caenorhabditis elegans. Genetics. PMID 26564160 DOI: 10.1534/Genetics.115.182592  0.464
2015 Seidel HS, Kimble J. Cell-cycle quiescence maintains C. elegans germline stem cells independent of GLP-1/Notch. Elife. 4. PMID 26551561 DOI: 10.7554/Elife.10832  0.41
2015 Friend K, Brooks HA, Propson NE, Thomson JA, Kimble J. Embryonic Stem Cell Growth Factors Regulate eIF2α Phosphorylation. Plos One. 10: e0139076. PMID 26406898 DOI: 10.1371/Journal.Pone.0139076  0.406
2015 Rhoads TW, Prasad A, Kwiecien NW, Merrill AE, Zawack K, Westphall MS, Schroeder FC, Kimble J, Coon JJ. NeuCode Labeling in Nematodes: Proteomic and Phosphoproteomic Impact of Ascaroside Treatment in Caenorhabditis elegans. Molecular & Cellular Proteomics : McP. 14: 2922-35. PMID 26392051 DOI: 10.1074/Mcp.M115.049684  0.321
2015 Seidel HS, Kimble J. Author response: Cell-cycle quiescence maintains Caenorhabditis elegans germline stem cells independent of GLP-1/Notch Elife. DOI: 10.7554/Elife.10832.027  0.386
2014 Sorokin EP, Gasch AP, Kimble J. Competence for chemical reprogramming of sexual fate correlates with an intersexual molecular signature in Caenorhabditis elegans. Genetics. 198: 561-75. PMID 25146970 DOI: 10.1534/Genetics.114.169409  0.759
2014 Ortiz MA, Noble D, Sorokin EP, Kimble J. A new dataset of spermatogenic vs. oogenic transcriptomes in the nematode Caenorhabditis elegans. G3 (Bethesda, Md.). 4: 1765-72. PMID 25060624 DOI: 10.1534/G3.114.012351  0.765
2014 Byrd DT, Knobel K, Affeldt K, Crittenden SL, Kimble J. A DTC niche plexus surrounds the germline stem cell pool in Caenorhabditis elegans. Plos One. 9: e88372. PMID 24586318 DOI: 10.1371/Journal.Pone.0088372  0.427
2014 Kershner AM, Shin H, Hansen TJ, Kimble J. Discovery of two GLP-1/Notch target genes that account for the role of GLP-1/Notch signaling in stem cell maintenance. Proceedings of the National Academy of Sciences of the United States of America. 111: 3739-44. PMID 24567412 DOI: 10.1073/Pnas.1401861111  0.788
2014 Kimble J, Seidel H. C. elegans germline stem cells and their niche Stembook. PMID 24354021 DOI: 10.3824/Stembook.1.95.1  0.479
2013 Kershner A, Crittenden SL, Friend K, Sorensen EB, Porter DF, Kimble J. Germline stem cells and their regulation in the nematode Caenorhabditis elegans. Advances in Experimental Medicine and Biology. 786: 29-46. PMID 23696350 DOI: 10.1007/978-94-007-6621-1_3  0.804
2013 Morgan CT, Noble D, Kimble J. Mitosis-meiosis and sperm-oocyte fate decisions are separable regulatory events. Proceedings of the National Academy of Sciences of the United States of America. 110: 3411-6. PMID 23401507 DOI: 10.1073/Pnas.1300928110  0.694
2013 LeGendre JB, Campbell ZT, Kroll-Conner P, Anderson P, Kimble J, Wickens M. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. The Journal of Biological Chemistry. 288: 2532-45. PMID 23195953 DOI: 10.1074/Jbc.M112.397349  0.436
2013 Snow JJ, Lee MH, Verheyden J, Kroll-Conner PL, Kimble J. C. elegans FOG-3/Tob can either promote or inhibit germline proliferation, depending on gene dosage and genetic context. Oncogene. 32: 2614-21. PMID 22797076 DOI: 10.1038/Onc.2012.291  0.819
2012 Cha DS, Datla US, Hollis SE, Kimble J, Lee MH. The Ras-ERK MAPK regulatory network controls dedifferentiation in Caenorhabditis elegans germline. Biochimica Et Biophysica Acta. 1823: 1847-55. PMID 22820175 DOI: 10.1016/J.Bbamcr.2012.07.006  0.45
2012 Buckley BA, Burkhart KB, Gu SG, Spracklin G, Kershner A, Fritz H, Kimble J, Fire A, Kennedy S. A nuclear Argonaute promotes multigenerational epigenetic inheritance and germline immortality. Nature. 489: 447-51. PMID 22810588 DOI: 10.1038/Nature11352  0.82
2012 Martynovsky M, Wong MC, Byrd DT, Kimble J, Schwarzbauer JE. mig-38, a novel gene that regulates distal tip cell turning during gonadogenesis in C. elegans hermaphrodites. Developmental Biology. 368: 404-14. PMID 22732572 DOI: 10.1016/J.Ydbio.2012.06.011  0.453
2012 Campbell ZT, Menichelli E, Friend K, Wu J, Kimble J, Williamson JR, Wickens M. Identification of a conserved interface between PUF and CPEB proteins. The Journal of Biological Chemistry. 287: 18854-62. PMID 22496444 DOI: 10.1074/Jbc.M112.352815  0.418
2012 Lander AD, Kimble J, Clevers H, Fuchs E, Montarras D, Buckingham M, Calof AL, Trumpp A, Oskarsson T. What does the concept of the stem cell niche really mean today? Bmc Biology. 10: 19. PMID 22405133 DOI: 10.1186/1741-7007-10-19  0.389
2012 Friend K, Campbell ZT, Cooke A, Kroll-Conner P, Wickens MP, Kimble J. A conserved PUF-Ago-eEF1A complex attenuates translation elongation. Nature Structural & Molecular Biology. 19: 176-83. PMID 22231398 DOI: 10.1038/Nsmb.2214  0.402
2012 Qiu C, Kershner A, Wang Y, Holley CP, Wilinski D, Keles S, Kimble J, Wickens M, Hall TM. Divergence of Pumilio/fem-3 mRNA binding factor (PUF) protein specificity through variations in an RNA-binding pocket. The Journal of Biological Chemistry. 287: 6949-57. PMID 22205700 DOI: 10.1074/Jbc.M111.326264  0.783
2012 Qiu C, Kershner A, Wang Y, Holley CH, Wilinski D, Keles S, Kimble J, Wickens M, Hall TMT. Divergence of PUF protein specificity through variations in an RNA-binding pocket Journal of Biological Chemistry. DOI: 10.2210/Pdb3V71/Pdb  0.771
2011 Seidel HS, Kimble J. The oogenic germline starvation response in C. elegans. Plos One. 6: e28074. PMID 22164230 DOI: 10.1371/Journal.Pone.0028074  0.348
2011 Kimble J. Molecular Regulation of the Mitosis/Meiosis Decision in Multicellular Organisms Cold Spring Harbor Perspectives in Biology. 3. PMID 21646377 DOI: 10.1101/Cshperspect.A002683  0.337
2011 Lee MH, Kim KW, Morgan CT, Morgan DE, Kimble J. Phosphorylation state of a Tob/BTG protein, FOG-3, regulates initiation and maintenance of the Caenorhabditis elegans sperm fate program. Proceedings of the National Academy of Sciences of the United States of America. 108: 9125-30. PMID 21571637 DOI: 10.1073/Pnas.1106027108  0.754
2011 Hinde E, Cardarelli F, Digman MA, Kershner A, Kimble J, Gratton E. The impact of mitotic versus interphase chromatin architecture on the molecular flow of EGFP by pair correlation analysis. Biophysical Journal. 100: 1829-36. PMID 21463597 DOI: 10.1016/J.Bpj.2011.02.024  0.751
2011 Jeong J, Verheyden JM, Kimble J. Cyclin E and Cdk2 control GLD-1, the mitosis/meiosis decision, and germline stem cells in Caenorhabditis elegans. Plos Genetics. 7. PMID 21455289 DOI: 10.1371/Journal.Pgen.1001348  0.472
2011 Snow JJ, Lee M, Kroll-Conner P, Kimble J. FOG-3/Tob can either promote or inhibit proliferation in the Caenorhabditis elegans germline Developmental Biology. 356: 228-229. DOI: 10.1016/J.Ydbio.2011.05.382  0.776
2011 Verheyden JM, Byrd DT, Kimble J. Chemical control of protein stability in C. elegans Developmental Biology. 356: 191. DOI: 10.1016/J.Ydbio.2011.05.244  0.332
2010 Kim KW, Wilson TL, Kimble J. GLD-2/RNP-8 cytoplasmic poly(A) polymerase is a broad-spectrum regulator of the oogenesis program. Proceedings of the National Academy of Sciences of the United States of America. 107: 17445-50. PMID 20855596 DOI: 10.1073/Pnas.1012611107  0.442
2010 Morgan DE, Crittenden SL, Kimble J. The C. elegans adult male germline: stem cells and sexual dimorphism. Developmental Biology. 346: 204-14. PMID 20659446 DOI: 10.1016/J.Ydbio.2010.07.022  0.644
2010 Kershner AM, Kimble J. Genome-wide analysis of mRNA targets for Caenorhabditis elegans FBF, a conserved stem cell regulator. Proceedings of the National Academy of Sciences of the United States of America. 107: 3936-41. PMID 20142496 DOI: 10.1073/Pnas.1000495107  0.802
2010 Morgan CT, Lee MH, Kimble J. Chemical reprogramming of Caenorhabditis elegans germ cell fate. Nature Chemical Biology. 6: 102-4. PMID 20081824 DOI: 10.1038/Nchembio.282  0.697
2010 Cinquin O, Crittenden SL, Morgan DE, Kimble J. Progression from a stem cell-like state to early differentiation in the C. elegans germ line. Proceedings of the National Academy of Sciences of the United States of America. 107: 2048-53. PMID 20080700 DOI: 10.1073/Pnas.0912704107  0.636
2010 Morgan DE, Crittenden SL, Kimble J. Germline stem cells and sexual identity in C. elegans adults Developmental Biology. 344: 414. DOI: 10.1016/J.Ydbio.2010.05.028  0.587
2009 Byrd DT, Kimble J. Scratching the niche that controls Caenorhabditis elegans germline stem cells. Seminars in Cell & Developmental Biology. 20: 1107-13. PMID 19765664 DOI: 10.1016/J.Semcdb.2009.09.005  0.457
2009 Kim KW, Nykamp K, Suh N, Bachorik JL, Wang L, Kimble J. Antagonism between GLD-2 binding partners controls gamete sex. Developmental Cell. 16: 723-33. PMID 19460348 DOI: 10.1016/J.Devcel.2009.04.002  0.8
2009 Chesney MA, Lam N, Morgan DE, Phillips BT, Kimble J. C. elegans HLH-2/E/Daughterless controls key regulatory cells during gonadogenesis. Developmental Biology. 331: 14-25. PMID 19376107 DOI: 10.1016/J.Ydbio.2009.04.015  0.741
2009 King RS, Maiden SL, Hawkins NC, Kidd AR, Kimble J, Hardin J, Walston TD. The N- or C-terminal domains of DSH-2 can activate the C. elegans Wnt/beta-catenin asymmetry pathway. Developmental Biology. 328: 234-44. PMID 19298786 DOI: 10.1016/J.Ydbio.2009.01.017  0.783
2009 Suh N, Crittenden SL, Goldstrohm A, Hook B, Thompson B, Wickens M, Kimble J. FBF and its dual control of gld-1 expression in the Caenorhabditis elegans germline. Genetics. 181: 1249-60. PMID 19221201 DOI: 10.1534/Genetics.108.099440  0.731
2008 Stumpf CR, Kimble J, Wickens M. A Caenorhabditis elegans PUF protein family with distinct RNA binding specificity. Rna (New York, N.Y.). 14: 1550-7. PMID 18579869 DOI: 10.1261/Rna.1095908  0.383
2008 Nykamp K, Lee MH, Kimble J. C. elegans La-related protein, LARP-1, localizes to germline P bodies and attenuates Ras-MAPK signaling during oogenesis. Rna (New York, N.Y.). 14: 1378-89. PMID 18515547 DOI: 10.1261/Rna.1066008  0.433
2008 Crittenden SL, Kimble J. Analysis of the C. elegans germline stem cell region. Methods of Molecular Biology. 1463: 27-44. PMID 18370049 DOI: 10.1007/978-1-60327-214-8_2  0.475
2007 Lee MH, Hook B, Pan G, Kershner AM, Merritt C, Seydoux G, Thomson JA, Wickens M, Kimble J. Conserved regulation of MAP kinase expression by PUF RNA-binding proteins. Plos Genetics. 3: e233. PMID 18166083 DOI: 10.1371/Journal.Pgen.0030233  0.821
2007 Kimble J, Crittenden SL. Controls of germline stem cells, entry into meiosis, and the sperm/oocyte decision in Caenorhabditis elegans. Annual Review of Cell and Developmental Biology. 23: 405-433. PMID 17506698 DOI: 10.1146/Annurev.Cellbio.23.090506.123326  0.515
2007 Kimble J, Page DC. The mysteries of sexual identity. The germ cell's perspective. Science (New York, N.Y.). 316: 400-1. PMID 17446389 DOI: 10.1126/Science.1142109  0.385
2007 Phillips BT, Kidd AR, King R, Hardin J, Kimble J. Reciprocal asymmetry of SYS-1/beta-catenin and POP-1/TCF controls asymmetric divisions in Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America. 104: 3231-6. PMID 17296929 DOI: 10.1073/Pnas.0611507104  0.795
2007 Lamont LB, Kimble J. Developmental expression of FOG-1/CPEB protein and its control in the Caenorhabditis elegans hermaphrodite germ line. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 236: 871-9. PMID 17279572 DOI: 10.1002/Dvdy.21081  0.82
2007 Thompson B, Wickens M, Kimble J. 19 Translational Control in Development Cold Spring Harbor Monograph Archive. 48: 507-544. DOI: 10.1101/087969767.48.507  0.681
2006 Hesselson D, Kimble J. Growth control by EGF repeats of the C. elegans Fibulin-1C isoform. The Journal of Cell Biology. 175: 217-23. PMID 17043142 DOI: 10.1083/Jcb.200608061  0.69
2006 Suh N, Jedamzik B, Eckmann CR, Wickens M, Kimble J. The GLD-2 poly(A) polymerase activates gld-1 mRNA in the Caenorhabditis elegans germ line. Proceedings of the National Academy of Sciences of the United States of America. 103: 15108-12. PMID 17012378 DOI: 10.1073/Pnas.0607050103  0.651
2006 Morrison SJ, Kimble J. Asymmetric and symmetric stem-cell divisions in development and cancer. Nature. 441: 1068-74. PMID 16810241 DOI: 10.1038/Nature04956  0.372
2006 Crittenden SL, Leonhard KA, Byrd DT, Kimble J. Cellular analyses of the mitotic region in the Caenorhabditis elegans adult germ line. Molecular Biology of the Cell. 17: 3051-61. PMID 16672375 DOI: 10.1091/Mbc.E06-03-0170  0.425
2006 Lam N, Chesney MA, Kimble J. Wnt signaling and CEH-22/tinman/Nkx2.5 specify a stem cell niche in C. elegans. Current Biology : Cb. 16: 287-95. PMID 16461282 DOI: 10.1016/J.Cub.2005.12.015  0.657
2006 Thompson BE, Lamont LB, Kimble J. Germ-line induction of the Caenorhabditis elegans vulva. Proceedings of the National Academy of Sciences of the United States of America. 103: 620-5. PMID 16407099 DOI: 10.1073/Pnas.0510264103  0.796
2006 Chesney MA, Kidd AR, Kimble J. gon-14 functions with class B and class C synthetic multivulva genes to control larval growth in Caenorhabditis elegans. Genetics. 172: 915-28. PMID 16322520 DOI: 10.1534/Genetics.105.048751  0.805
2006 Lee MH, Hook B, Lamont LB, Wickens M, Kimble J. LIP-1 phosphatase controls the extent of germline proliferation in Caenorhabditis elegans. The Embo Journal. 25: 88-96. PMID 16319922 DOI: 10.1038/Sj.Emboj.7600901  0.833
2005 Kimble J, Crittenden SL. Germline proliferation and its control. Wormbook. 1-14. PMID 18050413 DOI: 10.1895/Wormbook.1.13.1  0.517
2005 Tilmann C, Kimble J. Cyclin D regulation of a sexually dimorphic asymmetric cell division Developmental Cell. 9: 489-499. PMID 16198291 DOI: 10.1016/J.Devcel.2005.09.004  0.366
2005 Bachorik JL, Kimble J. Redundant control of the Caenorhabditis elegans sperm/oocyte switch by PUF-8 and FBF-1, two distinct PUF RNA-binding proteins. Proceedings of the National Academy of Sciences of the United States of America. 102: 10893-7. PMID 16037210 DOI: 10.1073/Pnas.0504593102  0.83
2005 Thompson BE, Bernstein DS, Bachorik JL, Petcherski AG, Wickens M, Kimble J. Dose-dependent control of proliferation and sperm specification by FOG-1/CPEB. Development (Cambridge, England). 132: 3471-81. PMID 16000383 DOI: 10.1242/Dev.01921  0.811
2005 Kidd AR, Miskowski JA, Siegfried KR, Sawa H, Kimble J. A beta-catenin identified by functional rather than sequence criteria and its role in Wnt/MAPK signaling. Cell. 121: 761-72. PMID 15935762 DOI: 10.1016/J.Cell.2005.03.029  0.785
2004 Hesselson D, Newman C, Kim KW, Kimble J. GON-1 and fibulin have antagonistic roles in control of organ shape. Current Biology : Cb. 14: 2005-10. PMID 15556862 DOI: 10.1016/J.Cub.2004.11.006  0.713
2004 Lamont LB, Crittenden SL, Bernstein D, Wickens M, Kimble J. FBF-1 and FBF-2 regulate the size of the mitotic region in the C. elegans germline. Developmental Cell. 7: 697-707. PMID 15525531 DOI: 10.1016/J.Devcel.2004.09.013  0.819
2004 Eckmann CR, Crittenden SL, Suh N, Kimble J. GLD-3 and control of the mitosis/meiosis decision in the germline of Caenorhabditis elegans. Genetics. 168: 147-60. PMID 15454534 DOI: 10.1534/Genetics.104.029264  0.613
2004 Wang L, Kimble J, Wickens M. Tissue-specific modification of gld-2 mRNA in C. elegans: likely C-to-U editing. Rna (New York, N.Y.). 10: 1444-8. PMID 15317977 DOI: 10.1261/Rna.7570804  0.61
2004 Mathies LD, Schvarzstein M, Morphy KM, Blelloch R, Spence AM, Kimble J. TRA-1/GLI controls development of somatic gonadal precursors in C. elegans. Development (Cambridge, England). 131: 4333-43. PMID 15294864 DOI: 10.1242/Dev.01288  0.483
2004 Kwak JE, Wang L, Ballantyne S, Kimble J, Wickens M. Mammalian GLD-2 homologs are poly(A) polymerases. Proceedings of the National Academy of Sciences of the United States of America. 101: 4407-12. PMID 15070731 DOI: 10.1073/Pnas.0400779101  0.611
2004 Siegfried KR, Kidd AR, Chesney MA, Kimble J. The sys-1 and sys-3 genes cooperate with Wnt signaling to establish the proximal-distal axis of the Caenorhabditis elegans gonad. Genetics. 166: 171-86. PMID 15020416 DOI: 10.1534/Genetics.166.1.171  0.81
2004 Chang W, Tilmann C, Thoemke K, Markussen FH, Mathies LD, Kimble J, Zarkower D. A forkhead protein controls sexual identity of the C. elegans male somatic gonad. Development (Cambridge, England). 131: 1425-36. PMID 14993191 DOI: 10.1242/Dev.01012  0.411
2003 Crittenden SL, Eckmann CR, Wang L, Bernstein DS, Wickens M, Kimble J. Regulation of the mitosis/meiosis decision in the Caenorhabditis elegans germline. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 358: 1359-62. PMID 14511482 DOI: 10.1098/Rstb.2003.1333  0.7
2003 Mathies LD, Henderson ST, Kimble J. The C. elegans Hand gene controls embryogenesis and early gonadogenesis. Development (Cambridge, England). 130: 2881-92. PMID 12756172 DOI: 10.1242/Dev.00483  0.466
2002 Haag ES, Wang S, Kimble J. Rapid coevolution of the nematode sex-determining genes fem-3 and tra-2. Current Biology : Cb. 12: 2035-41. PMID 12477393 DOI: 10.1016/S0960-9822(02)01333-7  0.417
2002 Eckmann CR, Kraemer B, Wickens M, Kimble J. GLD-3, a bicaudal-C homolog that inhibits FBF to control germline sex determination in C. elegans. Developmental Cell. 3: 697-710. PMID 12431376 DOI: 10.1016/S1534-5807(02)00322-2  0.469
2002 Rudel D, Kimble J. Evolution of discrete Notch-like receptors from a distant gene duplication in Caenorhabditis. Evolution & Development. 4: 319-333. PMID 12356262 DOI: 10.1046/J.1525-142X.2002.02027.X  0.791
2002 Wang L, Eckmann CR, Kadyk LC, Wickens M, Kimble J. A regulatory cytoplasmic poly(A) polymerase in Caenorhabditis elegans. Nature. 419: 312-6. PMID 12239571 DOI: 10.1038/Nature01039  0.653
2002 Belfiore M, Mathies LD, Pugnale P, Moulder G, Barstead R, Kimble J, Puoti A. The MEP-1 zinc-finger protein acts with MOG DEAH box proteins to control gene expression via the fem-3 3' untranslated region in Caenorhabditis elegans. Rna (New York, N.Y.). 8: 725-39. PMID 12088146 DOI: 10.1017/S1355838202028595  0.492
2002 Crittenden SL, Bernstein DS, Bachorik JL, Thompson BE, Gallegos M, Petcherski AG, Moulder G, Barstead R, Wickens M, Kimble J. A conserved RNA-binding protein controls germline stem cells in Caenorhabditis elegans. Nature. 417: 660-3. PMID 12050669 DOI: 10.1038/Nature754  0.809
2002 Wickens M, Bernstein DS, Kimble J, Parker R. A PUF family portrait: 3'UTR regulation as a way of life. Trends in Genetics : Tig. 18: 150-7. PMID 11858839 DOI: 10.1016/S0168-9525(01)02616-6  0.431
2002 Siegfried KR, Kimble J. POP-1 controls axis formation during early gonadogenesis in C. elegans. Development (Cambridge, England). 129: 443-53. PMID 11807036  0.737
2001 Wickens M, Bernstein D, Crittenden S, Luitjens C, Kimble J. PUF proteins and 3'UTR regulation in the Caenorhabditis elegans germ line. Cold Spring Harbor Symposia On Quantitative Biology. 66: 337-43. PMID 12762036 DOI: 10.1101/Sqb.2001.66.337  0.374
2001 Wang S, Kimble J. The TRA‐1 transcription factor binds TRA‐2 to regulate sexual fates in Caenorhabditis elegans The Embo Journal. 20: 1363-1372. PMID 11250902 DOI: 10.1093/Emboj/20.6.1363  0.424
2001 Miskowski J, Li Y, Kimble J. The sys-1 gene and sexual dimorphism during gonadogenesis in Caenorhabditis elegans. Developmental Biology. 230: 61-73. PMID 11161562 DOI: 10.1006/Dbio.2000.9998  0.403
2001 Jin SW, Kimble J, Ellis RE. Regulation of cell fate in Caenorhabditis elegans by a novel cytoplasmic polyadenylation element binding protein. Developmental Biology. 229: 537-53. PMID 11150246 DOI: 10.1006/Dbio.2000.9993  0.541
2000 Friedman L, Anna-Arriola SS, Hodgkin J, Kimble J. gon-4, a Cell Lineage Regulator Required for Gonadogenesis in Caenorhabditis elegans Developmental Biology. 228: 350-362. PMID 11112335 DOI: 10.1006/Dbio.2000.9944  0.699
2000 Luitjens C, Gallegos M, Kraemer B, Kimble J, Wickens M. CPEB proteins control two key steps in spermatogenesis in C. elegans. Genes & Development. 14: 2596-609. PMID 11040214 DOI: 10.1101/Gad.831700  0.515
2000 Huang K, Johnson KD, Petcherski AG, Vandergon T, Mosser EA, Copeland NG, Jenkins NA, Kimble J, Bresnick EH. A HECT domain ubiquitin ligase closely related to the mammalian protein WWP1 is essential for Caenorhabditis elegans embryogenesis. Gene. 252: 137-45. PMID 10903445 DOI: 10.1016/S0378-1119(00)00216-X  0.802
2000 Petcherski AG, Kimble J. Mastermind is a putative activator for Notch [1] Current Biology. 10. PMID 10898989 DOI: 10.1016/S0960-9822(00)00577-7  0.753
2000 Petcherski AG, Kimble J. LAG-3 is a putative transcriptional activator in the C. elegans Notch pathway Nature. 405: 364-368. PMID 10830967 DOI: 10.1038/35012645  0.814
2000 Friedman L, Higgin JJ, Moulder G, Barstead R, Raines RT, Kimble J. Prolyl 4-hydroxylase is required for viability and morphogenesis in Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America. 97: 4736-41. PMID 10781079 DOI: 10.1073/Pnas.97.9.4736  0.65
2000 Puoti A, Kimble J. The hermaphrodite sperm/oocyte switch requires the Caenorhabditis elegans homologs of PRP2 and PRP22. Proceedings of the National Academy of Sciences of the United States of America. 97: 3276-81. PMID 10737793 DOI: 10.1073/Pnas.97.7.3276  0.427
2000 Chen PJ, Singal A, Kimble J, Ellis RE. A novel member of the tob family of proteins controls sexual fate in Caenorhabditis elegans germ cells. Developmental Biology. 217: 77-90. PMID 10625537 DOI: 10.1006/Dbio.1999.9521  0.508
1999 Blelloch R, Anna-Arriola SS, Gao D, Li Y, Hodgkin J, Kimble J. The gon-1 gene is required for gonadal morphogenesis in Caenorhabditis elegans. Developmental Biology. 216: 382-393. PMID 10588887 DOI: 10.1006/Dbio.1999.9491  0.41
1999 Blelloch R, Newman C, Kimble J. Control Of Cell Migration During Caenorhabditis Elegans Development Current Opinion in Cell Biology. 11: 608-613. PMID 10508660 DOI: 10.1016/S0955-0674(99)00028-9  0.373
1999 Kraemer B, Crittenden S, Gallegos M, Moulder G, Barstead R, Kimble J, Wickens M. NANOS-3 and FBF proteins physically interact to control the sperm-oocyte switch in Caenorhabditis elegans. Current Biology : Cb. 9: 1009-18. PMID 10508609 DOI: 10.1016/S0960-9822(99)80449-7  0.475
1999 Blelloch R, Kimble J. Control of organ shape by a secreted metalloprotease in the nematode Caenorhabditis elegans Nature. 399: 586-590. PMID 10376599 DOI: 10.1038/21196  0.433
1999 Puoti A, Kimble J. The Caenorhabditis elegans sex determination gene mog-1 encodes a member of the DEAH-Box protein family. Molecular and Cellular Biology. 19: 2189-97. PMID 10022905 DOI: 10.1128/Mcb.19.3.2189  0.472
1998 Kuwabara PE, Okkema PG, Kimble J. Germ-line regulation of the Caenorhabditis elegans sex-determining gene tra-2. Developmental Biology. 204: 251-62. PMID 9851857 DOI: 10.1006/Dbio.1998.9062  0.751
1998 Gallegos M, Ahringer J, Crittenden S, Kimble J. Repression by the 3' UTR of fem-3, a sex-determining gene, relies on a ubiquitous mog-dependent control in Caenorhabditis elegans. The Embo Journal. 17: 6337-47. PMID 9799241 DOI: 10.1093/Emboj/17.21.6337  0.433
1998 Kimble J, Henderson S, Crittenden S. Notch/LIN-12 signaling: transduction by regulated protein slicing Trends in Biochemical Sciences. 23: 353-357. PMID 9787642 DOI: 10.1016/S0968-0004(98)01263-8  0.36
1998 Horner MA, Quintin S, Domeier ME, Kimble J, Labouesse M, Mango SE. pha-4, an HNF-3 homolog, specifies pharyngeal organ identity in Caenorhabditis elegans Genes and Development. 12: 1947-1952. PMID 9649499 DOI: 10.1101/Gad.12.13.1947  0.405
1998 Hodgkin J, Horvitz HR, Jasny BR, Kimble J. C. elegans: Sequence to biology Science. 282: 2011. DOI: 10.1126/Science.282.5396.2011  0.323
1997 Kimble J, Simpson P. The LIN-12/notch signaling pathway and its regulation Annual Review of Cell and Developmental Biology. 13: 333-361. PMID 9442877 DOI: 10.1146/Annurev.Cellbio.13.1.333  0.368
1997 Zhang B, Gallegos M, Puoti A, Durkin E, Fields S, Kimble J, Wickens MP. A conserved RNA-binding protein that regulates sexual fates in the C. elegans hermaphrodite germ line. Nature. 390: 477-84. PMID 9393998 DOI: 10.1038/37297  0.454
1997 Henderson ST, Gao D, Christensen S, Kimble J. Functional domains of LAG-2, a putative signaling ligand for LIN-12 and GLP-1 receptors in Caenorhabditis elegans. Molecular Biology of the Cell. 8: 1751-62. PMID 9307971 DOI: 10.1091/Mbc.8.9.1751  0.39
1997 Panganiban G, Irvine SM, Lowe C, Roehl H, Corley LS, Sherbon B, Grenier JK, Fallon JF, Kimble J, Walker M, Wray GA, Swalla BJ, Martindale MQ, Carroll SB. The origin and evolution of animal appendages. Proceedings of the National Academy of Sciences of the United States of America. 94: 5162-6. PMID 9144208 DOI: 10.1073/Pnas.94.10.5162  0.323
1997 Crittenden SL, Rudel D, Binder J, Evans TC, Kimble J. Genes required for GLP-1 asymmetry in the early Caenorhabditis elegans embryo Developmental Biology. 181: 36-46. PMID 9015263 DOI: 10.1006/Dbio.1996.8413  0.803
1997 Puoti A, Gallegos M, Zhang B, Wickens MP, Kimble J. Controls Of Cell Fate And Pattern By 3' Untranslated Regions : The Caenorhabditis Elegans Sperm/Oocyte Decision Cold Spring Harbor Symposia On Quantitative Biology. 62: 19-24. DOI: 10.1101/Sqb.1997.062.01.005  0.363
1997 Anderson P, Kimble J. mRNA and Translation Cold Spring Harbor Monograph Archive. 33: 185-208. DOI: 10.1101/087969532.33.185  0.358
1996 Wickens M, Goodwin EB, Kimble J, Strickland S, Hentze MW. 15 Translational Control of Developmental Decisions Cold Spring Harbor Monograph Archive. 30: 295-370. DOI: 10.1101/087969458.30.411  0.446
1996 Roehl H, Bosenberg M, Blelloch R, Kimble J. Roles of the RAM and ANK domains in signaling by the C. elegans GLP-1 receptor. The Embo Journal. 15: 7002-7012. DOI: 10.1002/J.1460-2075.1996.Tb01092.X  0.362
1995 Gao D, Kimble J. APX-1 can substitute for its homolog LAG-2 to direct cell interactions throughout Caenorhabditis elegans development Proceedings of the National Academy of Sciences of the United States of America. 92: 9839-9842. PMID 7568229 DOI: 10.1073/Pnas.92.21.9839  0.412
1994 Evans TC, Crittenden SL, Kodoyianni V, Kimble J. Translational control of maternal glp-1 mRNA establishes an asymmetry in the C. elegans embryo Cell. 77: 183-194. PMID 8168128 DOI: 10.1016/0092-8674(94)90311-5  0.399
1994 Evans TC, Crittenden SL, Kodoyianni V, Kimble J. Translational control of maternal glp-1 mRNA establishes an asymmetry in the C, elegans embryo Trends in Genetics. 10: 264. DOI: 10.1016/0168-9525(90)90005-Q  0.34
1993 Goodwin EB, Okkema PG, Evans TC, Kimble J. Translational regulation of tra-2 by its 3′ untranslated region controls sexual identity in C. elegans Cell. 75: 329-339. PMID 8402916 DOI: 10.1016/0092-8674(93)80074-O  0.766
1993 Roehl H, Kimble J. Control of cell fate in C. elegans by a GLP-1 peptide consisting primarily of ankyrin repeats Nature. 364: 632-635. PMID 8350921 DOI: 10.1038/364632A0  0.445
1993 Graham PL, Schedl T, Kimble J. More mog genes that influence the switch from spermatogenesis to oogenesis in the hermaphrodite germ line of Caenorhabditis elegans. Developmental Genetics. 14: 471-484. PMID 8111975 DOI: 10.1002/Dvg.1020140608  0.409
1992 Kuwabara PE, Okkema PG, Kimble J. tra-2 encodes a membrane protein and may mediate cell communication in the Caenorhabditis elegans sex determination pathway. Molecular Biology of the Cell. 3: 461-73. PMID 1498366 DOI: 10.1091/Mbc.3.4.461  0.773
1992 Kodoyianni V, Maine EM, Kimble J. Molecular basis of loss-of-function mutations in the glp-1 gene of Caenorhabditis elegans Molecular Biology of the Cell. 3: 1199-1213. PMID 1457827 DOI: 10.1091/Mbc.3.11.1199  0.35
1992 Kuwabara PE, Kimble J. Molecular genetics of sex determination in C. elegans. Trends in Genetics. 8: 164-168. PMID 1369741 DOI: 10.1016/0168-9525(92)90218-S  0.349
1992 Kimble J, Crittenden S, Lambie E, Kodoyianni V, Mango S, Troemel E. Regulation of induction by GLP1, a localized cell surface receptor in Caenorhabditis elegans Cold Spring Harbor Symposia On Quantitative Biology. 57: 401-408. PMID 1339675 DOI: 10.1101/Sqb.1992.057.01.045  0.322
1992 Ahringer J, Rosenquist TA, Lawson DN, Kimble J. The Caenorhabditis elegans sex determining gene fem-3 is regulated post-transcriptionally. The Embo Journal. 11: 2303-2310. DOI: 10.1002/J.1460-2075.1992.Tb05289.X  0.436
1991 Mango SE, Maine EM, Kimble J. Carboxy-terminal truncation activates glp-1 protein to specify vulval fates in Caenorhabditis elegans Nature. 352: 811-815. PMID 1881436 DOI: 10.1038/352811A0  0.412
1991 Lambie EJ, Kimble J. Genetic Control Of Cell Interactions In Nematode Development Annual Review of Genetics. 25: 411-436. PMID 1812813 DOI: 10.1146/Annurev.Ge.25.120191.002211  0.375
1991 Ahringer J, Kimble J. Control of the sperm-oocyte switch in Caenorhabditis elegans hermaphrodites by the fem-3 3' untranslated region. Nature. 349: 346-8. PMID 1702880 DOI: 10.1038/349346A0  0.481
1991 Okkema PG, Kimble J. Molecular analysis of tra-2, a sex determining gene in C.elegans. The Embo Journal. 10: 171-176. DOI: 10.1002/J.1460-2075.1991.Tb07933.X  0.75
1990 Maine EM, Kimble J. Genetic control of cell communication in C. elegans development Bioessays. 12: 265-271. PMID 2201294 DOI: 10.1002/Bies.950120604  0.373
1989 Austin J, Kimble J. Transcript analysis of glp-1 and lin-12, homologous genes required for cell interactions during development of C. elegans. Cell. 58: 565-571. PMID 2758467 DOI: 10.1016/0092-8674(89)90437-6  0.461
1988 Rosenquist TA, Kimble J. Molecular cloning and transcript analysis of fem-3, a sex-determination gene in Caenorhabditis elegans. Genes & Development. 2: 606-616. PMID 3384333 DOI: 10.1101/Gad.2.5.606  0.401
1988 Kimble J. Genetic control of sex determination in the germ line of Caenorhabditis elegans. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 322: 11-8. PMID 2907794 DOI: 10.1098/Rstb.1988.0110  0.357
1988 Sulston J, Horvitz HR, Kimble J. APPENDIX 3 Cell Lineage Cold Spring Harbor Monograph Archive. 17: 457-489. DOI: 10.1101/087969307.17.457  0.628
1988 Kimble J, Ward S. 7 Germ-line Development and Fertilization Cold Spring Harbor Monograph Archive. 17: 191-213. DOI: 10.1101/087969307.17.191  0.424
1987 Austin J, Kimble J. glp-1 Is required in the germ line for regulation of the decision between mitosis and meiosis in C. elegans Cell. 51: 589-599. PMID 3677168 DOI: 10.1016/0092-8674(87)90128-0  0.414
1987 Kimble J. Genetic Control of Sex Determination in the Germ Line of C. elegans Results and Problems in Cell Differentiation. 15: 117-128. PMID 3317585 DOI: 10.1007/978-3-540-47184-4_3  0.381
1984 Kimble J, Edgar L, Hirsh D. Specification of male development in Caenorhabditis elegans: the fem genes. Developmental Biology. 105: 234-9. PMID 6468762 DOI: 10.1016/0012-1606(84)90279-3  0.611
1983 Kimble J, Sharrock WJ. Tissue-specific synthesis of yolk proteins in Caenorhabditis elegans Developmental Biology. 96: 189-196. PMID 6825952 DOI: 10.1016/0012-1606(83)90322-6  0.371
1982 Kimble J, Hodgkin J, Smith T, Smith J. Suppression of an amber mutation by microinjection of suppressor tRNA in C. elegans Nature. 299: 456-458. PMID 7121584 DOI: 10.1038/299456A0  0.353
1981 Kimble J. Alterations in cell lineage following laser ablation of cells in the somatic gonad of Caenorhabditis elegans Developmental Biology. 87: 286-300. PMID 7286433 DOI: 10.1016/0012-1606(81)90152-4  0.39
1981 Kimble JE, White JG. On the control of germ cell development in Caenorhabditis elegans. Developmental Biology. 81: 208-19. PMID 7202837 DOI: 10.1016/0012-1606(81)90284-0  0.424
1981 Kimble JE. Strategies for control of pattern formation in Caenorhabditis elegans. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 295: 539-51. PMID 6117910 DOI: 10.1098/Rstb.1981.0159  0.397
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