Joshua J. Coon - Publications

Affiliations: 
Chemistry University of Wisconsin, Madison, Madison, WI 
Area:
Bioanalytical Chemistry, Mass Spectrometry & Proteomics
Website:
http://www.chem.wisc.edu/users/jcoon

91 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Robinson KP, Jochem A, Johnson SE, Reddy TR, Russell JD, Coon JJ, Pagliarini DJ. Defining intermediates and redundancies in coenzyme Q precursor biosynthesis. The Journal of Biological Chemistry. 100643. PMID 33862086 DOI: 10.1016/j.jbc.2021.100643  1
2021 McKetney J, Panyard DJ, Johnson SC, Carlsson C, Engelman CD, Coon JJ. Pilot proteomic analysis of cerebrospinal fluid in Alzheimer's disease. Proteomics. Clinical Applications. e2000072. PMID 33682374 DOI: 10.1002/prca.202000072  0.56
2021 Steinert ND, Potts GK, Wilson GM, Klamen AM, Lin KH, Hermanson JB, McNally RM, Coon JJ, Hornberger TA. Mapping of the contraction-induced phosphoproteome identifies TRIM28 as a significant regulator of skeletal muscle size and function. Cell Reports. 34: 108796. PMID 33657380 DOI: 10.1016/j.celrep.2021.108796  0.36
2021 He Y, Rashan EH, Linke V, Shishkova E, Hebert AS, Jochem A, Westphall MS, Pagliarini DJ, Overmyer KA, Coon JJ. Multi-Omic Single-Shot Technology for Integrated Proteome and Lipidome Analysis. Analytical Chemistry. PMID 33617230 DOI: 10.1021/acs.analchem.0c04764  1
2020 Brademan DR, Miller IJ, Kwiecien NW, Pagliarini DJ, Westphall MS, Coon JJ, Shishkova E. Argonaut: A Web Platform for Collaborative Multi-omic Data Visualization and Exploration. Patterns (New York, N.Y.). 1. PMID 33154995 DOI: 10.1016/j.patter.2020.100122  1
2020 Overmyer KA, Shishkova E, Miller IJ, Balnis J, Bernstein MN, Peters-Clarke TM, Meyer JG, Quan Q, Muehlbauer LK, Trujillo EA, He Y, Chopra A, Chieng HC, Tiwari A, Judson MA, ... ... Coon JJ, et al. Large-Scale Multi-omic Analysis of COVID-19 Severity. Cell Systems. PMID 33096026 DOI: 10.1016/j.cels.2020.10.003  1
2020 Linke V, Overmyer KA, Miller IJ, Brademan DR, Hutchins PD, Trujillo EA, Reddy TR, Russell JD, Cushing EM, Schueler KL, Stapleton DS, Rabaglia ME, Keller MP, Gatti DM, Keele GR, ... ... Coon JJ, et al. A large-scale genome-lipid association map guides lipid identification. Nature Metabolism. PMID 32958938 DOI: 10.1038/s42255-020-00278-3  0.92
2020 Kurumbang NP, Vera JM, Hebert AS, Coon JJ, Landick R. Heterologous expression of a glycosyl hydrolase and cellular reprogramming enable Zymomonas mobilis growth on cellobiose. Plos One. 15: e0226235. PMID 32797046 DOI: 10.1371/Journal.Pone.0226235  0.8
2020 Overmyer KA, Shishkova E, Miller IJ, Balnis J, Bernstein MN, Peters-Clarke TM, Meyer JG, Quan Q, Muehlbauer LK, Trujillo EA, He Y, Chopra A, Chieng HC, Tiwari A, Judson MA, ... ... Coon JJ, et al. Large-scale Multi-omic Analysis of COVID-19 Severity. Medrxiv : the Preprint Server For Health Sciences. PMID 32743614 DOI: 10.1101/2020.07.17.20156513  1
2020 Vera JM, Ghosh IN, Zhang Y, Hebert AS, Coon JJ, Landick R. Genome-Scale Transcription-Translation Mapping Reveals Features of Zymomonas mobilis Transcription Units and Promoters. Msystems. 5. PMID 32694125 DOI: 10.1128/mSystems.00250-20  0.8
2020 Lemke RAS, Olson SM, Morse K, Karlen SD, Higbee A, Beebe ET, Ralph J, Coon JJ, Fox BG, Donohue TJ. A bacterial biosynthetic pathway for methylated furan fatty acids. The Journal of Biological Chemistry. PMID 32434926 DOI: 10.1074/Jbc.Ra120.013697  0.4
2020 Karlen SD, Fasahati P, Mazaheri M, Serate J, Smith RA, Sirobhushanam S, Chen M, Tymokhin VI, Cass CL, Liu S, Padmakshan D, Xie D, Zhang Y, McGee MA, Russell JD, ... Coon JJ, et al. Assessing the Viability of Recovery of Hydroxycinnamic Acids from Lignocellulosic Biorefinery Alkaline Pretreatment Waste Streams. Chemsuschem. PMID 32285625 DOI: 10.1002/Cssc.202000820  0.92
2020 Leung KK, Wilson GM, Kirkemo LL, Riley NM, Coon JJ, Wells JA. Broad and thematic remodeling of the surfaceome and glycoproteome on isogenic cells transformed with driving proliferative oncogenes. Proceedings of the National Academy of Sciences of the United States of America. PMID 32205440 DOI: 10.1073/Pnas.1917947117  0.68
2020 Qu Y, Dubiak KM, Peuchen EH, Champion MM, Zhang Z, Hebert AS, Wright S, Coon JJ, Huber PW, Dovichi NJ. Quantitative capillary zone electrophoresis-mass spectrometry reveals the N-glycome developmental plan during vertebrate embryogenesis. Molecular Omics. PMID 32149324 DOI: 10.1039/d0mo00005a  0.8
2020 Peters-Clarke T, Quan Q, Brademan D, Hebert AS, Westphall M, Coon JJ. Ribonucleic acid sequence characterization by negative electron transfer dissociation mass spectrometry. Analytical Chemistry. PMID 32091202 DOI: 10.1021/Acs.Analchem.9B05388  0.8
2020 Johnson JM, Hebert AS, Drane QH, Lera RF, Wan J, Weaver BA, Coon JJ, Burkard ME. A Genetic Toggle for Chemical Control of Individual Plk1 Substrates. Cell Chemical Biology. PMID 32017920 DOI: 10.1016/J.Chembiol.2020.01.007  0.8
2020 Karlen SD, Fasahati P, Mazaheri M, Serate J, Smith RA, Sirobhushanam S, Chen M, Tymkhin VI, Cass CL, Liu S, Padmakshan D, Xie D, Zhang Y, McGee MA, Russell JD, ... Coon JJ, et al. Assessing the viability of recovering hydroxycinnamic acids from lignocellulosic biorefinery alkaline pretreatment waste streams. Chemsuschem. PMID 31984673 DOI: 10.1002/cssc.201903345  0.92
2020 Stefely JA, Zhang Y, Freiberger EC, Kwiecien NW, Thomas HE, Davis AM, Lowry ND, Vincent CE, Shishkova E, Clark NA, Medvedovic M, Coon JJ, Pagliarini DJ, Mercer CA. Mass spectrometry proteomics reveals a function for mammalian CALCOCO1 in MTOR-regulated selective autophagy. Autophagy. PMID 31971854 DOI: 10.1080/15548627.2020.1719746  0.6
2019 Zhang Y, Vera JM, Xie D, Serate J, Pohlmann E, Russell JD, Hebert AS, Coon JJ, Sato TK, Landick R. Multiomic Fermentation Using Chemically Defined Synthetic Hydrolyzates Revealed Multiple Effects of Lignocellulose-Derived Inhibitors on Cell Physiology and Xylose Utilization in . Frontiers in Microbiology. 10: 2596. PMID 31787963 DOI: 10.3389/Fmicb.2019.02596  0.92
2019 Miller IJ, Peters SR, Overmyer KA, Paulson BR, Westphall MS, Coon JJ. Real-time health monitoring through urine metabolomics. Npj Digital Medicine. 2: 109. PMID 31728416 DOI: 10.1038/s41746-019-0185-y  1
2019 Tatli M, Hebert AS, Coon JJ, Amador-Noguez D. Genome Wide Phosphoproteome Analysis of Under Anaerobic, Aerobic, and N-Fixing Conditions. Frontiers in Microbiology. 10: 1986. PMID 31551951 DOI: 10.3389/Fmicb.2019.01986  0.8
2019 Trujillo EA, Hebert AS, Brademan DR, Coon JJ. Maximizing Tandem MS Acquisition Rates for Shotgun Proteomics. Analytical Chemistry. PMID 31509394 DOI: 10.1021/Acs.Analchem.9B02979  1
2019 Kemis JH, Linke V, Barrett KL, Boehm FJ, Traeger LL, Keller MP, Rabaglia ME, Schueler KL, Stapleton DS, Gatti DM, Churchill GA, Amador-Noguez D, Russell JD, Yandell BS, Broman KW, ... Coon JJ, et al. Genetic determinants of gut microbiota composition and bile acid profiles in mice. Plos Genetics. 15: e1008073. PMID 31465442 DOI: 10.1371/Journal.Pgen.1008073  1
2019 Niemi NM, Wilson GM, Overmyer KA, Vögtle FN, Myketin L, Lohman DC, Schueler KL, Attie AD, Meisinger C, Coon JJ, Pagliarini DJ. Pptc7 is an essential phosphatase for promoting mammalian mitochondrial metabolism and biogenesis. Nature Communications. 10: 3197. PMID 31324765 DOI: 10.1038/S41467-019-11047-6  1
2019 Hutchins PD, Russell JD, Coon JJ. Accelerating Lipidomic Method Development through in silico Simulation. Analytical Chemistry. PMID 31298839 DOI: 10.1021/Acs.Analchem.9B01234  1
2019 Wagner ER, Myers KS, Riley NM, Coon JJ, Gasch AP. PKA and HOG signaling contribute separable roles to anaerobic xylose fermentation in yeast engineered for biofuel production. Plos One. 14: e0212389. PMID 31112537 DOI: 10.1371/Journal.Pone.0212389  0.68
2019 Brademan DR, Riley NM, Kwiecien NW, Coon JJ. Interactive Peptide Spectral Annotator: A Versatile Web-Based Tool for Proteomic Applications. Molecular & Cellular Proteomics : McP. PMID 31088857 DOI: 10.1074/Mcp.Tir118.001209  0.68
2019 Myers KS, Riley NM, MacGilvray ME, Sato TK, McGee M, Heilberger J, Coon JJ, Gasch AP. Rewired cellular signaling coordinates sugar and hypoxic responses for anaerobic xylose fermentation in yeast. Plos Genetics. 15: e1008037. PMID 30856163 DOI: 10.1371/Journal.Pgen.1008037  0.68
2019 Denu RA, Sass MM, Johnson JM, Potts GK, Choudhary A, Coon JJ, Burkard ME. Polo-like kinase 4 maintains centriolar satellite integrity by phosphorylation of centrosomal protein 131 (CEP131). The Journal of Biological Chemistry. PMID 30804208 DOI: 10.1074/Jbc.Ra118.004867  0.36
2019 Martien JI, Hebert AS, Stevenson DM, Regner MR, Khana DB, Coon JJ, Amador-Noguez D. Systems-Level Analysis of Oxygen Exposure in : Implications for Isoprenoid Production. Msystems. 4. PMID 30801024 DOI: 10.1128/mSystems.00284-18  0.8
2019 Hutchins PD, Russell JD, Coon JJ. Mapping Lipid Fragmentation for Tailored Mass Spectral Libraries. Journal of the American Society For Mass Spectrometry. PMID 30756325 DOI: 10.1007/S13361-018-02125-Y  1
2019 McKetney J, Runde R, Hebert AS, Salamat S, Roy S, Coon JJ. Proteomic atlas of the human brain in Alzheimer's disease. Journal of Proteome Research. PMID 30735395 DOI: 10.1021/Acs.Jproteome.9B00004  0.8
2019 Strekalova E, Malin D, Weisenhorn EMM, Russell JD, Hoelper D, Jain A, Coon JJ, Lewis PW, Cryns VL. S-adenosylmethionine biosynthesis is a targetable metabolic vulnerability of cancer stem cells. Breast Cancer Research and Treatment. PMID 30712196 DOI: 10.1007/S10549-019-05146-7  0.92
2019 Subramanian K, Jochem A, Le Vasseur M, Lewis S, Paulson BR, Reddy TR, Russell JD, Coon JJ, Pagliarini DJ, Nunnari J. Coenzyme Q biosynthetic proteins assemble in a substrate-dependent manner into domains at ER-mitochondria contacts. The Journal of Cell Biology. PMID 30674579 DOI: 10.1083/Jcb.201808044  1
2018 Ghosh IN, Martien J, Hebert AS, Zhang Y, Coon JJ, Amador-Noguez D, Landick R. OptSSeq explores enzyme expression and function landscapes to maximize isobutanol production rate. Metabolic Engineering. PMID 30594629 DOI: 10.1016/J.Ymben.2018.12.008  0.8
2018 Peuchen EH, Cox OF, Sun L, Hebert AS, Coon JJ, Champion MM, Dovichi NJ, Huber PW. Author Correction: Phosphorylation Dynamics Dominate the Regulated Proteome during Early Xenopus Development. Scientific Reports. 8: 17393. PMID 30459361 DOI: 10.1038/S41598-018-35442-Z  0.8
2018 Zhang Z, Hebert A, Westphall M, Qu Y, Coon JJ, Dovichi NJ. Single Shot Capillary Zone Electrophoresis-Mass Spectrometry Produces Over 27,000 Peptide and Nearly 4,400 Protein Identifications by Combining a Very Low-Electroosmosis Coated Capillary, a Third-Generation Electrokinetically-Pumped Sheath-Flow Nanospray Interface, an Orbitrap Fusion Lumos Tribid Mass Spectrometer, and an Advanced Peak Determination Algorithm. Analytical Chemistry. PMID 30179504 DOI: 10.1021/Acs.Analchem.8B02991  0.6
2018 Jha P, McDevitt MT, Gupta R, Quiros PM, Williams EG, Gariani K, Sleiman MB, Diserens L, Jochem A, Ulbrich A, Coon JJ, Auwerx J, Pagliarini DJ. Systems Analyses Reveal Physiological Roles and Genetic Regulators of Liver Lipid Species. Cell Systems. PMID 29909277 DOI: 10.1016/J.Cels.2018.05.016  0.6
2018 Jha P, McDevitt MT, Halilbasic E, Williams EG, Quiros PM, Gariani K, Sleiman MB, Gupta R, Ulbrich A, Jochem A, Coon JJ, Trauner M, Pagliarini DJ, Auwerx J. Genetic Regulation of Plasma Lipid Species and Their Association with Metabolic Phenotypes. Cell Systems. PMID 29909275 DOI: 10.1016/J.Cels.2018.05.009  0.6
2018 Yang S, Vera JM, Grass J, Savvakis G, Moskvin OV, Yang Y, McIlwain SJ, Lyu Y, Zinonos I, Hebert AS, Coon JJ, Bates DM, Sato TK, Brown SD, Himmel ME, et al. Complete genome sequence and the expression pattern of plasmids of the model ethanologen ZM4 and its xylose-utilizing derivatives 8b and 2032. Biotechnology For Biofuels. 11: 125. PMID 29743953 DOI: 10.1186/S13068-018-1116-X  0.8
2018 Esnault S, Hebert AS, Jarjour NN, Coon JJ, Mosher DF. Proteomic and Phospho-proteomic Changes Induced by Prolonged Activation of Human Eosinophils with IL-3. Journal of Proteome Research. PMID 29706072 DOI: 10.1021/Acs.Jproteome.8B00057  0.8
2018 Hutchins PD, Russell JD, Coon JJ. LipiDex: An Integrated Software Package for High-Confidence Lipid Identification. Cell Systems. PMID 29705063 DOI: 10.1016/J.Cels.2018.03.011  1
2018 Turton KB, Wilkerson EM, Hebert AS, Fogerty FJ, Schira HM, Botros FE, Coon JJ, Mosher DF. Expression of novel "LOCGEF" isoforms of ARHGEF18 in eosinophils. Journal of Leukocyte Biology. PMID 29601110 DOI: 10.1002/Jlb.2Ma1017-418Rr  0.8
2018 Rhoads TW, Burhans MS, Chen VB, Hutchins PD, Rush MJP, Clark JP, Stark JL, McIlwain SJ, Eghbalnia HR, Pavelec DM, Ong IM, Denu JM, Markley JL, Coon JJ, Colman RJ, et al. Caloric Restriction Engages Hepatic RNA Processing Mechanisms in Rhesus Monkeys. Cell Metabolism. 27: 677-688.e5. PMID 29514073 DOI: 10.1016/J.Cmet.2018.01.014  0.72
2018 Mitok KA, Freiberger EC, Schueler KL, Rabaglia ME, Stapleton DS, Kwiecien NW, Malec PA, Hebert AS, Broman AT, Kennedy RT, Keller MP, Coon JJ, Attie AD. Islet proteomics reveals genetic variation in dopamine production resulting in altered insulin secretion. The Journal of Biological Chemistry. PMID 29496998 DOI: 10.1074/Jbc.Ra117.001102  1
2018 Kontur WS, Bingman CA, Olmsted CN, Wassarman DR, Ulbrich A, Gall DL, Smith RW, Yusko LM, Fox BG, Noguera DR, Coon JJ, Donohue TJ. uses a Nu-class glutathione-S-transferase as a glutathione lyase in breaking the β-aryl ether bond of lignin. The Journal of Biological Chemistry. PMID 29449375 DOI: 10.1074/Jbc.Ra117.001268  0.6
2018 Lee JH, Mand MR, Kao CH, Zhou Y, Ryu SW, Richards AL, Coon JJ, Paull TT. ATM directs DNA damage responses and proteostasis via genetically separable pathways. Science Signaling. 11. PMID 29317520 DOI: 10.1126/Scisignal.Aan5598  0.36
2017 Lapointe CP, Stefely JA, Jochem A, Hutchins PD, Wilson GM, Kwiecien NW, Coon JJ, Wickens M, Pagliarini DJ. Multi-omics Reveal Specific Targets of the RNA-Binding Protein Puf3p and Its Orchestration of Mitochondrial Biogenesis. Cell Systems. PMID 29248374 DOI: 10.1016/J.Cels.2017.11.012  0.72
2017 Veling MT, Reidenbach AG, Freiberger EC, Kwiecien NW, Hutchins PD, Drahnak MJ, Jochem A, Ulbrich A, Rush MJP, Russell JD, Coon JJ, Pagliarini DJ. Multi-omic Mitoprotease Profiling Defines a Role for Oct1p in Coenzyme Q Production. Molecular Cell. 68: 970-977.e11. PMID 29220658 DOI: 10.1016/J.Molcel.2017.11.023  1
2017 Vakirlis NN, Hebert AS, Opulente DA, Achaz G, Hittinger CT, Fischer G, Coon JJ, Lafontaine I. A molecular portrait of de novo genes in yeasts. Molecular Biology and Evolution. PMID 29220506 DOI: 10.1093/Molbev/Msx315  0.8
2017 Reidenbach AG, Kemmerer ZA, Aydin D, Jochem A, McDevitt MT, Hutchins PD, Stark JL, Stefely JA, Reddy T, Hebert AS, Wilkerson EM, Johnson IE, Bingman CA, Markley JL, Coon JJ, et al. Conserved Lipid and Small-Molecule Modulation of COQ8 Reveals Regulation of the Ancient Kinase-like UbiB Family. Cell Chemical Biology. PMID 29198567 DOI: 10.1016/J.Chembiol.2017.11.001  0.8
2017 Riley NM, Coon JJ. The Role of Electron Transfer Dissociation in Modern Proteomics. Analytical Chemistry. PMID 29172454 DOI: 10.1021/Acs.Analchem.7B04810  0.68
2017 Peuchen EH, Cox OF, Sun L, Hebert AS, Coon JJ, Champion MM, Dovichi NJ, Huber PW. Phosphorylation Dynamics Dominate the Regulated Proteome during Early Xenopus Development. Scientific Reports. 7: 15647. PMID 29142207 DOI: 10.1038/S41598-017-15936-Y  0.8
2017 Mosher DF, Wilkerson EM, Turton KB, Hebert AS, Coon JJ. Proteomics of Eosinophil Activation. Frontiers in Medicine. 4: 159. PMID 29034237 DOI: 10.3389/Fmed.2017.00159  0.8
2017 Diaz JE, Morgan CW, Minogue CE, Hebert AS, Coon JJ, Wells JA. A Split-Abl Kinase for Direct Activation in Cells. Cell Chemical Biology. PMID 28919041 DOI: 10.1016/J.Chembiol.2017.08.007  0.8
2017 Hewitt KJ, Katsumura KR, Matson DR, Devadas P, Tanimura N, Hebert AS, Coon JJ, Kim JS, Dewey CN, Keles S, Hao S, Paulson RF, Bresnick EH. GATA Factor-Regulated Samd14 Enhancer Confers Red Blood Cell Regeneration and Survival in Severe Anemia. Developmental Cell. 42: 213-225.e4. PMID 28787589 DOI: 10.1016/J.Devcel.2017.07.009  0.8
2017 Mondal A, Dawson AR, Potts GK, Freiberger EC, Baker SF, Moser LA, Bernard KA, Coon JJ, Mehle A. Influenza virus recruits host protein kinase C to control assembly and activity of its replication machinery. Elife. 6. PMID 28758638 DOI: 10.7554/Elife.26910  0.36
2017 Chung J, Wittig JG, Ghamari A, Maeda M, Dailey TA, Bergonia H, Kafina MD, Coughlin EE, Minogue CE, Hebert AS, Li L, Kaplan J, Lodish HF, Bauer DE, Orkin SH, ... ... Coon JJ, et al. Erythropoietin signaling regulates heme biosynthesis. Elife. 6. PMID 28553927 DOI: 10.7554/Elife.24767  0.8
2017 Shishkova E, Zeng H, Liu F, Kwiecien NW, Hebert AS, Coon JJ, Xu W. Global mapping of CARM1 substrates defines enzyme specificity and substrate recognition. Nature Communications. 8: 15571. PMID 28537268 DOI: 10.1038/Ncomms15571  0.8
2017 Guo X, Niemi NM, Hutchins PD, Condon SG, Jochem A, Ulbrich A, Higbee AJ, Russell JD, Senes A, Coon JJ, Pagliarini DJ. Ptc7p Dephosphorylates Select Mitochondrial Proteins to Enhance Metabolic Function. Cell Reports. 18: 307-313. PMID 28076776 DOI: 10.1016/J.Celrep.2016.12.049  1
2016 Sato TK, Tremaine M, Parreiras LS, Hebert AS, Myers KS, Higbee AJ, Sardi M, McIlwain SJ, Ong IM, Breuer RJ, Narasimhan RA, McGee MA, Dickinson Q, La Reau A, Xie D, ... ... Coon JJ, et al. Correction: Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae. Plos Genetics. 12: e1006447. PMID 27828955 DOI: 10.1371/journal.pgen.1006447  0.8
2016 Shishkova E, Hebert AS, Coon JJ. Now, More Than Ever, Proteomics Needs Better Chromatography. Cell Systems. 3: 321-324. PMID 27788355 DOI: 10.1016/J.Cels.2016.10.007  0.8
2016 Weisenhorn EM, Van't Erve TJ, Riley NM, Hess JR, Raife TJ, Coon JJ. Multi-omics evidence for inheritance of energy pathways in red blood cells. Molecular & Cellular Proteomics : McP. PMID 27777340 DOI: 10.1182/Blood.V128.22.3838.3838  0.68
2016 Sato TK, Tremaine M, Parreiras LS, Hebert AS, Myers KS, Higbee AJ, Sardi M, McIlwain SJ, Ong IM, Breuer RJ, Avanasi Narasimhan R, McGee MA, Dickinson Q, La Reau A, Xie D, ... ... Coon JJ, et al. Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae. Plos Genetics. 12: e1006372. PMID 27741250 DOI: 10.1371/Journal.Pgen.1006372  0.8
2016 Kuang MC, Hutchins PD, Russell JD, Coon JJ, Hittinger CT. Ongoing resolution of duplicate gene functions shapes the diversification of a metabolic network. Elife. 5. PMID 27690225 DOI: 10.7554/Elife.19027  1
2016 Stefely JA, Kwiecien NW, Freiberger EC, Richards AL, Jochem A, Rush MJ, Ulbrich A, Robinson KP, Hutchins PD, Veling MT, Guo X, Kemmerer ZA, Connors KJ, Trujillo EA, Sokol J, ... ... Coon JJ, et al. Mitochondrial protein functions elucidated by multi-omic mass spectrometry profiling. Nature Biotechnology. PMID 27669165 DOI: 10.1038/Nbt.3683  1
2016 Xue L, Blythe EE, Freiberger EC, Mamrosh J, Hebert AS, Reitsma JM, Hess S, Coon JJ, Deshaies RJ. VCP-adaptor interactions are exceptionally dynamic and subject to differential modulation by a VCP inhibitor. Molecular & Cellular Proteomics : McP. PMID 27406709 DOI: 10.1074/Mcp.M116.061036  0.8
2016 Baughman JM, Rose CM, Kolumam G, Webster JD, Wilkerson EM, Merrill AE, Rhoads TW, Noubade R, Katavolos P, Lesch J, Stapleton DS, Rabaglia ME, Schueler KL, Asuncion R, Domeyer M, ... ... Coon JJ, et al. NeuCode Proteomics Reveals Bap1 Regulation of Metabolism. Cell Reports. 16: 583-595. PMID 27373151 DOI: 10.1016/J.Celrep.2016.05.096  1
2016 McIlwain SJ, Peris D, Sardi M, Moskvin OV, Zhan F, Myers KS, Riley NM, Buzzell A, Parreiras LS, Ong IM, Landick R, Coon JJ, Gasch AP, Sato TK, Hittinger CT. Genome Sequence and Analysis of a Stress-Tolerant, Wild-Derived Strain of Saccharomyces cerevisiae Used in Biofuels Research. G3 (Bethesda, Md.). 6: 1757-66. PMID 27172212 DOI: 10.1534/G3.116.029389  0.68
2016 Lera RF, Potts GK, Suzuki A, Johnson JM, Salmon ED, Coon JJ, Burkard ME. Decoding Polo-like kinase 1 signaling along the kinetochore-centromere axis. Nature Chemical Biology. PMID 27043190 DOI: 10.1038/Nchembio.2060  0.36
2016 Horton JL, Martin OJ, Lai L, Riley NM, Richards AL, Vega RB, Leone TC, Pagliarini DJ, Muoio DM, Bedi KC, Margulies KB, Coon JJ, Kelly DP. Mitochondrial protein hyperacetylation in the failing heart. Jci Insight. 2. PMID 26998524 DOI: 10.1172/Jci.Insight.84897  0.68
2015 Huang M, Hebert AS, Coon JJ, Hull CM. Protein Composition of Infectious Spores Reveals Novel Sexual Development and Germination Factors in Cryptococcus. Plos Genetics. 11: e1005490. PMID 26313153 DOI: 10.1371/Journal.Pgen.1005490  0.8
2015 Annis DS, Ma H, Balas DM, Kumfer KT, Sandbo N, Potts GK, Coon JJ, Mosher DF. Absence of Vitamin K-Dependent γ-Carboxylation in Human Periostin Extracted from Fibrotic Lung or Secreted from a Cell Line Engineered to Optimize γ-Carboxylation. Plos One. 10: e0135374. PMID 26273833 DOI: 10.1371/Journal.Pone.0135374  0.4
2015 Venkateshwaran M, Jayaraman D, Chabaud M, Genre A, Balloon AJ, Maeda J, Forshey K, den Os D, Kwiecien NW, Coon JJ, Barker DG, Ané JM. A role for the mevalonate pathway in early plant symbiotic signaling. Proceedings of the National Academy of Sciences of the United States of America. 112: 9781-6. PMID 26199419 DOI: 10.1073/Pnas.1413762112  0.68
2015 Nguyen HT, Shaffer CJ, Ledvina AR, Coon JJ, Ture?ek F. Serine effects on collision-induced dissociation and photodissociation of peptide cation radicals of the z (+•) -type. International Journal of Mass Spectrometry. 378: 20-30. PMID 26005367 DOI: 10.1016/J.Ijms.2014.06.028  0.8
2014 Brumbaugh J, Russell JD, Yu P, Westphall MS, Coon JJ, Thomson JA. NANOG Is Multiply Phosphorylated and Directly Modified by ERK2 and CDK1 In Vitro. Stem Cell Reports. 2: 18-25. PMID 28039751 DOI: 10.1016/j.stemcr.2013.12.005  0.92
2014 Kebede MA, Oler AT, Gregg T, Balloon AJ, Johnson A, Mitok K, Rabaglia M, Schueler K, Stapleton D, Thorstenson C, Wrighton L, Floyd BJ, Richards O, Raines S, Eliceiri K, ... ... Coon JL, et al. SORCS1 is necessary for normal insulin secretory granule biogenesis in metabolically stressed β cells. The Journal of Clinical Investigation. 124: 4240-56. PMID 25157818 DOI: 10.1172/JCI74072  1
2014 Bhatnagar S, Soni MS, Wrighton LS, Hebert AS, Zhou AS, Paul PK, Gregg T, Rabaglia ME, Keller MP, Coon JJ, Attie AD. Phosphorylation and degradation of tomosyn-2 de-represses insulin secretion. The Journal of Biological Chemistry. 289: 25276-86. PMID 25002582 DOI: 10.1074/Jbc.M114.575985  1
2014 Ulbrich A, Merrill AE, Hebert AS, Westphall MS, Keller MP, Attie AD, Coon JJ. Neutron-encoded protein quantification by peptide carbamylation. Journal of the American Society For Mass Spectrometry. 25: 6-9. PMID 24178922 DOI: 10.1007/S13361-013-0765-Z  1
2013 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, et al. Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation. The Journal of Biological Chemistry. 288: 26209-19. PMID 23864654 DOI: 10.1074/Jbc.M113.483396  1
2012 Grimsrud PA, Carson JJ, Hebert AS, Hubler SL, Niemi NM, Bailey DJ, Jochem A, Stapleton DS, Keller MP, Westphall MS, Yandell BS, Attie AD, Coon JJ, Pagliarini DJ. A quantitative map of the liver mitochondrial phosphoproteome reveals posttranslational control of ketogenesis. Cell Metabolism. 16: 672-83. PMID 23140645 DOI: 10.1016/J.Cmet.2012.10.004  1
2009 Zürbig P, Decramer S, Dakna M, Jantos J, Good DM, Coon JJ, Bandin F, Mischak H, Bascands JL, Schanstra JP. The human urinary proteome reveals high similarity between kidney aging and chronic kidney disease. Proteomics. 9: 2108-17. PMID 19296547 DOI: 10.1002/Pmic.200800560  0.68
2008 Theodorescu D, Schiffer E, Bauer HW, Douwes F, Eichhorn F, Polley R, Schmidt T, Schöfer W, Zürbig P, Good DM, Coon JJ, Mischak H. Discovery and validation of urinary biomarkers for prostate cancer. Proteomics. Clinical Applications. 2: 556-570. PMID 19759844 DOI: 10.1002/Prca.200780082  0.68
2008 Rossing K, Mischak H, Dakna M, Zürbig P, Novak J, Julian BA, Good DM, Coon JJ, Tarnow L, Rossing P. Urinary proteomics in diabetes and CKD. Journal of the American Society of Nephrology : Jasn. 19: 1283-90. PMID 18448586 DOI: 10.1681/Asn.2007091025  0.68
2008 Zimmerli LU, Schiffer E, Zürbig P, Good DM, Kellmann M, Mouls L, Pitt AR, Coon JJ, Schmieder RE, Peter KH, Mischak H, Kolch W, Delles C, Dominiczak AF. Urinary proteomic biomarkers in coronary artery disease. Molecular & Cellular Proteomics : McP. 7: 290-8. PMID 17951555 DOI: 10.1074/Mcp.M700394-Mcp200  0.68
2007 Good DM, Thongboonkerd V, Novak J, Bascands JL, Schanstra JP, Coon JJ, Dominiczak A, Mischak H. Body fluid proteomics for biomarker discovery: lessons from the past hold the key to success in the future. Journal of Proteome Research. 6: 4549-55. PMID 17970587 DOI: 10.1021/Pr070529W  0.68
2006 Good DM, Coon JJ. Advancing proteomics with ion/ion chemistry. Biotechniques. 40: 783-9. PMID 16774122 DOI: 10.2144/000112194  0.68
2003 Coon JJ, Steele HA, Laipis PJ, Harrison WW. Direct atmospheric pressure coupling of polyacrylamide gel electrophoresis to mass spectrometry for rapid protein sequence analysis. Journal of Proteome Research. 2: 610-7. PMID 14692454 DOI: 10.1021/Pr034031F  1
2002 Coon JJ, Steele HA, Laipis PJ, Harrison WW. Laser desorption-atmospheric pressure chemical ionization: a novel ion source for the direct coupling of polyacrylamide gel electrophoresis to mass spectrometry. Journal of Mass Spectrometry : Jms. 37: 1163-7. PMID 12447894 DOI: 10.1002/Jms.385  1
2002 Coon JJ, Harrison WW. Laser desorption-atmospheric pressure chemical ionization mass spectrometry for the analysis of peptides from aqueous solutions. Analytical Chemistry. 74: 5600-5. PMID 12433094 DOI: 10.1021/Ac020402K  1
2002 Coon JJ, McHale KJ, Harrison WW. Atmospheric pressure laser desorption/chemical ionization mass spectrometry: a new ionization method based on existing themes. Rapid Communications in Mass Spectrometry : Rcm. 16: 681-5. PMID 11921247 DOI: 10.1002/Rcm.626  1
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