Joanne Chory - Publications

Affiliations: 
Salk Institute for Biological Studies, La Jolla, CA, United States 
Website:
https://en.wikipedia.org/wiki/Joanne_Chory

231 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Conn A, Chandrasekhar A, Rongen MV, Leyser O, Chory J, Navlakha S. Network trade-offs and homeostasis in Arabidopsis shoot architectures. Plos Computational Biology. 15: e1007325. PMID 31509526 DOI: 10.1371/journal.pcbi.1007325  0.44
2019 Li B, Sun L, Huang J, Göschl C, Shi W, Chory J, Busch W. GSNOR provides plant tolerance to iron toxicity via preventing iron-dependent nitrosative and oxidative cytotoxicity. Nature Communications. 10: 3896. PMID 31467270 DOI: 10.1038/s41467-019-11892-5  1
2019 Zander M, Willige BC, He Y, Nguyen TA, Langford AE, Nehring R, Howell E, McGrath R, Bartlett A, Castanon R, Nery JR, Chen H, Zhang Z, Jupe F, Stepanova A, ... ... Chory J, et al. Epigenetic silencing of a multifunctional plant stress regulator. Elife. 8. PMID 31418686 DOI: 10.7554/eLife.47835  0.92
2019 Bürger M, Chory J. Stressed Out About Hormones: How Plants Orchestrate Immunity. Cell Host & Microbe. 26: 163-172. PMID 31415749 DOI: 10.1016/j.chom.2019.07.006  0.92
2019 Procko C, Morrison S, Dunar C, Mills S, Maldonado B, Cockrum C, Peters NE, Huang SC, Chory J. Big Data to the Bench: Transcriptome Analysis for Undergraduates. Cbe Life Sciences Education. 18: ar19. PMID 31074696 DOI: 10.1187/cbe.18-08-0161  0.6
2019 Zhao X, Huang J, Chory J. GUN1 interacts with MORF2 to regulate plastid RNA editing during retrograde signaling. Proceedings of the National Academy of Sciences of the United States of America. PMID 30988197 DOI: 10.1073/pnas.1820426116  1
2019 Gallego-Bartolomé J, Liu W, Kuo PH, Feng S, Ghoshal B, Gardiner J, Zhao JM, Park SY, Chory J, Jacobsen SE. Co-targeting RNA Polymerases IV and V Promotes Efficient De Novo DNA Methylation in Arabidopsis. Cell. PMID 30739798 DOI: 10.1016/j.cell.2019.01.029  0.56
2019 Bürger M, Mashiguchi K, Lee HJ, Nakano M, Takemoto K, Seto Y, Yamaguchi S, Chory J. Structural Basis of Karrikin and Non-natural Strigolactone Perception in Physcomitrella patens. Cell Reports. 26: 855-865.e5. PMID 30673608 DOI: 10.1016/j.celrep.2019.01.003  0.92
2019 Bürger M, Chory J. Erratum: Publisher Correction: Structural and chemical biology of deacetylases for carbohydrates, proteins, small molecules and histones. Communications Biology. 2: 16. PMID 30623108 DOI: 10.1038/s42003-018-0258-5  0.92
2019 Ren H, Willige BC, Jaillais Y, Geng S, Park MY, Gray WM, Chory J. BRASSINOSTEROID-SIGNALING KINASE 3, a plasma membrane-associated scaffold protein involved in early brassinosteroid signaling. Plos Genetics. 15: e1007904. PMID 30615605 DOI: 10.1371/journal.pgen.1007904  0.96
2018 Bürger M, Chory J. Structural and chemical biology of deacetylases for carbohydrates, proteins, small molecules and histones. Communications Biology. 1: 217. PMID 30534609 DOI: 10.1038/s42003-018-0214-4  0.92
2018 Zhao X, Huang J, Chory J. Genome uncoupled 1 mutants are hypersensitive to norflurazon and lincomycin. Plant Physiology. PMID 30154176 DOI: 10.1104/pp.18.00772  1
2018 Cagnola JI, Cerdan PD, Pacin M, Andrade A, Rodriguez MV, Zurbriggen MD, Legris M, Buchovsky S, Carrillo N, Chory J, Blazquez MA, Alabadi D, Casal JJ. Long-day photoperiod enhances jasmonic acid-related plant defense. Plant Physiology. PMID 30068539 DOI: 10.1104/pp.18.00443  0.52
2018 Willige BC, Chory J, Bürger M. Next Generation of Plant-Associated Bacterial Genome Data. Cell Host & Microbe. 24: 10-11. PMID 30001515 DOI: 10.1016/j.chom.2018.06.009  0.92
2018 Perrella G, Davidson MLH, O'Donnell L, Nastase AM, Herzyk P, Breton G, Pruneda-Paz JL, Kay SA, Chory J, Kaiserli E. ZINC-FINGER interactions mediate transcriptional regulation of hypocotyl growth in . Proceedings of the National Academy of Sciences of the United States of America. PMID 29686058 DOI: 10.1073/pnas.1718099115  0.72
2018 Liu W, Duttke SH, Hetzel J, Groth M, Feng S, Gallego-Bartolome J, Zhong Z, Kuo HY, Wang Z, Zhai J, Chory J, Jacobsen SE. RNA-directed DNA methylation involves co-transcriptional small-RNA-guided slicing of polymerase V transcripts in Arabidopsis. Nature Plants. PMID 29379150 DOI: 10.1038/s41477-017-0100-y  0.6
2017 Bürger M, Willige BC, Chory J. A hydrophobic anchor mechanism defines a deacetylase family that suppresses host response against YopJ effectors. Nature Communications. 8: 2201. PMID 29259199 DOI: 10.1038/s41467-017-02347-w  0.92
2017 Qiu Y, Pasoreck EK, Reddy AK, Nagatani A, Ma W, Chory J, Chen M. Mechanism of early light signaling by the carboxy-terminal output module of Arabidopsis phytochrome B. Nature Communications. 8: 1905. PMID 29199270 DOI: 10.1038/s41467-017-02062-6  1
2017 Conn A, Pedmale UV, Chory J, Navlakha S. High-Resolution Laser Scanning Reveals Plant Architectures that Reflect Universal Network Design Principles. Cell Systems. 5: 53-62.e3. PMID 28750198 DOI: 10.1016/j.cels.2017.06.017  0.72
2017 Conn A, Pedmale UV, Chory J, Stevens CF, Navlakha S. A Statistical Description of Plant Shoot Architecture. Current Biology : Cb. PMID 28690115 DOI: 10.1016/j.cub.2017.06.009  0.72
2017 Vermeer JE, Wijk RV, Goedhart J, Geldner N, Chory J, Gadella TW, Munnik T. In Vivo Imaging of Diacylglycerol at the Cytoplasmic Leaflet of Plant Membranes. Plant & Cell Physiology. PMID 28158855 DOI: 10.1093/pcp/pcx012  0.92
2017 Seluzicki A, Burko Y, Chory J. Dancing in the Dark: Darkness as a Signal in Plants. Plant, Cell & Environment. PMID 28044340 DOI: 10.1111/pce.12900  0.6
2016 Hetzel J, Duttke SH, Benner C, Chory J. Nascent RNA sequencing reveals distinct features in plant transcription. Proceedings of the National Academy of Sciences of the United States of America. PMID 27729530 DOI: 10.1073/pnas.1603217113  0.6
2016 Procko C, Burko Y, Jaillais Y, Ljung K, Long JA, Chory J. Corrigendum: The epidermis coordinates auxin-induced stem growth in response to shade. Genes & Development. 30: 2018. PMID 27664239 DOI: 10.1101/gad.290544.116  0.96
2016 Procko C, Burko Y, Jaillais Y, Ljung K, Long JA, Chory J. The epidermis coordinates auxin-induced stem growth in response to shade. Genes & Development. 30: 1529-41. PMID 27401556 DOI: 10.1101/gad.283234.116  0.6
2016 Yazaki J, Galli M, Kim AY, Nito K, Aleman F, Chang KN, Carvunis AR, Quan R, Nguyen H, Song L, Alvarez JM, Huang SC, Chen H, Ramachandran N, Altmann S, ... ... Chory J, et al. Mapping transcription factor interactome networks using HaloTag protein arrays. Proceedings of the National Academy of Sciences of the United States of America. PMID 27357687 DOI: 10.1073/pnas.1603229113  0.6
2016 Zheng Z, Guo Y, Novák O, Chen W, Ljung K, Noel JP, Chory J. Local auxin metabolism regulates environment-induced hypocotyl elongation. Nature Plants. 2: 16025. PMID 27249562 DOI: 10.1038/nplants.2016.25  1
2015 Pedmale UV, Huang SC, Zander M, Cole BJ, Hetzel J, Ljung K, Reis PA, Sridevi P, Nito K, Nery JR, Ecker JR, Chory J. Cryptochromes Interact Directly with PIFs to Control Plant Growth in Limiting Blue Light. Cell. PMID 26724867 DOI: 10.1016/j.cell.2015.12.018  1
2015 Kaiserli E, Páldi K, O'Donnell L, Batalov O, Pedmale UV, Nusinow DA, Kay SA, Chory J. Integration of Light and Photoperiodic Signaling in Transcriptional Nuclear Foci. Developmental Cell. 35: 311-21. PMID 26555051 DOI: 10.1016/j.devcel.2015.10.008  0.72
2015 Willige BC, Chory J. A current perspective on the role of AGCVIII kinases in PIN-mediated apical hook development. Frontiers in Plant Science. 6: 767. PMID 26500658 DOI: 10.3389/fpls.2015.00767  0.52
2015 Woodson JD, Joens MS, Sinson AB, Gilkerson J, Salomé PA, Weigel D, Fitzpatrick JA, Chory J. Ubiquitin facilitates a quality-control pathway that removes damaged chloroplasts. Science (New York, N.Y.). 350: 450-4. PMID 26494759 DOI: 10.1126/science.aac7444  1
2015 Yu J, Qiu H, Liu X, Wang M, Gao Y, Chory J, Tao Y. Characterization of tub4(P287L) , a β-tubulin mutant, revealed new aspects of microtubule regulation in shade. Journal of Integrative Plant Biology. PMID 25899068 DOI: 10.1111/jipb.12363  0.88
2015 Wudick MM, Li X, Valentini V, Geldner N, Chory J, Lin J, Maurel C, Luu DT. Subcellular Redistribution of Root Aquaporins Induced by Hydrogen Peroxide. Molecular Plant. 8: 1103-14. PMID 25749111 DOI: 10.1016/j.molp.2015.02.017  0.92
2015 Zorzatto C, MacHado JPB, Lopes KVG, Nascimento KJT, Pereira WA, Brustolini OJB, Reis PAB, Calil IP, Deguchi M, Sachetto-Martins G, Gouveia BC, Loriato VAP, Silva MAC, Silva FF, Santos AA, ... Chory J, et al. NIK1-mediated translation suppression functions as a plant antiviral immunity mechanism Nature. 520: 679-682. PMID 25707794 DOI: 10.1038/nature14171  1
2015 Martins S, Dohmann EM, Cayrel A, Johnson A, Fischer W, Pojer F, Satiat-Jeunemaître B, Jaillais Y, Chory J, Geldner N, Vert G. Internalization and vacuolar targeting of the brassinosteroid hormone receptor BRI1 are regulated by ubiquitination. Nature Communications. 6: 6151. PMID 25608221 DOI: 10.1038/ncomms7151  1
2014 Belkhadir Y, Yang L, Hetzel J, Dangl JL, Chory J. The growth-defense pivot: crisis management in plants mediated by LRR-RK surface receptors. Trends in Biochemical Sciences. 39: 447-56. PMID 25089011 DOI: 10.1016/j.tibs.2014.06.006  1
2014 Krzymuski M, Cerdán PD, Zhu L, Vinh A, Chory J, Huq E, Casal JJ. Phytochrome A antagonizes PHYTOCHROME INTERACTING FACTOR 1 to prevent over-activation of photomorphogenesis. Molecular Plant. 7: 1415-28. PMID 25009301 DOI: 10.1093/mp/ssu078  0.52
2014 Li L, Zhang Q, Pedmale UV, Nito K, Fu W, Lin L, Hazen SP, Chory J. PIL1 participates in a negative feedback loop that regulates its own gene expression in response to shade. Molecular Plant. 7: 1582-5. PMID 24895419 DOI: 10.1093/mp/ssu068  1
2014 Procko C, Crenshaw CM, Ljung K, Noel JP, Chory J. Cotyledon-Generated Auxin Is Required for Shade-Induced Hypocotyl Growth in Brassica rapa. Plant Physiology. 165: 1285-1301. PMID 24891610 DOI: 10.1104/pp.114.241844  1
2014 Zhong X, Du J, Hale CJ, Gallego-Bartolome J, Feng S, Vashisht AA, Chory J, Wohlschlegel JA, Patel DJ, Jacobsen SE. Molecular mechanism of action of plant DRM de novo DNA methyltransferases. Cell. 157: 1050-60. PMID 24855943 DOI: 10.1016/j.cell.2014.03.056  0.56
2014 Fitz Gerald JN, Carlson AL, Smith E, Maloof JN, Weigel D, Chory J, Borevitz JO, Swanson RJ. New Arabidopsis advanced intercross recombinant inbred lines reveal female control of nonrandom mating. Plant Physiology. 165: 175-85. PMID 24623850 DOI: 10.1104/pp.113.233213  1
2014 Zheng Z, Germain Ade S, Chory J. Unfolding the mysteries of strigolactone signaling. Molecular Plant. 7: 934-6. PMID 24623790 DOI: 10.1093/mp/ssu021  0.6
2014 Simon ML, Platre MP, Assil S, van Wijk R, Chen WY, Chory J, Dreux M, Munnik T, Jaillais Y. A multi-colour/multi-affinity marker set to visualize phosphoinositide dynamics in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 77: 322-37. PMID 24147788 DOI: 10.1111/tpj.12358  0.96
2013 Jung HS, Crisp PA, Estavillo GM, Cole B, Hong F, Mockler TC, Pogson BJ, Chory J. Subset of heat-shock transcription factors required for the early response of Arabidopsis to excess light. Proceedings of the National Academy of Sciences of the United States of America. 110: 14474-9. PMID 23918368 DOI: 10.1073/pnas.1311632110  1
2013 Nito K, Wong CC, Yates JR, Chory J. Tyrosine phosphorylation regulates the activity of phytochrome photoreceptors. Cell Reports. 3: 1970-9. PMID 23746445 DOI: 10.1016/j.celrep.2013.05.006  1
2013 Zhong SH, Liu JZ, Jin H, Lin L, Li Q, Chen Y, Yuan YX, Wang ZY, Huang H, Qi YJ, Chen XY, Vaucheret H, Chory J, Li J, He ZH. Warm temperatures induce transgenerational epigenetic release of RNA silencing by inhibiting siRNA biogenesis in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 110: 9171-6. PMID 23686579 DOI: 10.1073/pnas.1219655110  1
2013 Guo Y, Zheng Z, La Clair JJ, Chory J, Noel JP. Smoke-derived karrikin perception by the α/β-hydrolase KAI2 from Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 110: 8284-9. PMID 23613584 DOI: 10.1073/pnas.1306265110  1
2013 Shani E, Weinstain R, Zhang Y, Castillejo C, Kaiserli E, Chory J, Tsien RY, Estelle M. Gibberellins accumulate in the elongating endodermal cells of Arabidopsis root. Proceedings of the National Academy of Sciences of the United States of America. 110: 4834-9. PMID 23382232 DOI: 10.1073/pnas.1300436110  1
2013 Zheng Z, Guo Y, Novák O, Dai X, Zhao Y, Ljung K, Noel JP, Chory J. Coordination of auxin and ethylene biosynthesis by the aminotransferase VAS1. Nature Chemical Biology. 9: 244-6. PMID 23377040 DOI: 10.1038/nchembio.1178  1
2013 Woodson JD, Perez-Ruiz JM, Schmitz RJ, Ecker JR, Chory J. Sigma factor-mediated plastid retrograde signals control nuclear gene expression. The Plant Journal : For Cell and Molecular Biology. 73: 1-13. PMID 22950756 DOI: 10.1111/tpj.12011  1
2012 Iñigo S, Giraldez AN, Chory J, Cerdán PD. Proteasome-mediated turnover of Arabidopsis MED25 is coupled to the activation of FLOWERING LOCUS T transcription. Plant Physiology. 160: 1662-73. PMID 22992513 DOI: 10.1104/pp.112.205500  1
2012 Woodson JD, Chory J. Organelle signaling: how stressed chloroplasts communicate with the nucleus. Current Biology : Cb. 22: R690-2. PMID 22974998 DOI: 10.1016/j.cub.2012.07.028  1
2012 Cole BJ, Chory J. Image-based analysis of light-grown seedling hypocotyls in Arabidopsis. Methods in Molecular Biology (Clifton, N.J.). 918: 1-7. PMID 22893281 DOI: 10.1007/978-1-61779-995-2_1  1
2012 Gilkerson J, Perez-Ruiz JM, Chory J, Callis J. The plastid-localized pfkB-type carbohydrate kinases FRUCTOKINASE-LIKE 1 and 2 are essential for growth and development of Arabidopsis thaliana. Bmc Plant Biology. 12: 102. PMID 22770232 DOI: 10.1186/1471-2229-12-102  1
2012 Li L, Ljung K, Breton G, Schmitz RJ, Pruneda-Paz J, Cowing-Zitron C, Cole BJ, Ivans LJ, Pedmale UV, Jung HS, Ecker JR, Kay SA, Chory J. Linking photoreceptor excitation to changes in plant architecture. Genes & Development. 26: 785-90. PMID 22508725 DOI: 10.1101/gad.187849.112  1
2012 Lu YJ, Schornack S, Spallek T, Geldner N, Chory J, Schellmann S, Schumacher K, Kamoun S, Robatzek S. Patterns of plant subcellular responses to successful oomycete infections reveal differences in host cell reprogramming and endocytic trafficking. Cellular Microbiology. 14: 682-97. PMID 22233428 DOI: 10.1111/j.1462-5822.2012.01751.x  0.96
2012 Belkhadir Y, Jaillais Y, Epple P, Balsemão-Pires E, Dangl JL, Chory J. Brassinosteroids modulate the efficiency of plant immune responses to microbe-associated molecular patterns. Proceedings of the National Academy of Sciences of the United States of America. 109: 297-302. PMID 22087001 DOI: 10.1073/pnas.1112840108  1
2012 Cuyvers S, Dornez E, Abou Hachem M, Svensson B, Hothorn M, Chory J, Delcour JA, Courtin CM. Isothermal titration calorimetry and surface plasmon resonance allow quantifying substrate binding to different binding sites of Bacillus subtilis xylanase. Analytical Biochemistry. 420: 90-2. PMID 21964501 DOI: 10.1016/j.ab.2011.09.005  0.88
2011 Vert G, Chory J. Crosstalk in cellular signaling: background noise or the real thing? Developmental Cell. 21: 985-91. PMID 22172668 DOI: 10.1016/j.devcel.2011.11.006  1
2011 Won C, Shen X, Mashiguchi K, Zheng Z, Dai X, Cheng Y, Kasahara H, Kamiya Y, Chory J, Zhao Y. Conversion of tryptophan to indole-3-acetic acid by TRYPTOPHAN AMINOTRANSFERASES OF ARABIDOPSIS and YUCCAs in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 108: 18518-23. PMID 22025721 DOI: 10.1073/pnas.1108436108  0.96
2011 Hothorn M, Dabi T, Chory J. Structural basis for cytokinin recognition by Arabidopsis thaliana histidine kinase 4. Nature Chemical Biology. 7: 766-8. PMID 21964459 DOI: 10.1038/nchembio.667  0.88
2011 Chen M, Chory J. Phytochrome signaling mechanisms and the control of plant development. Trends in Cell Biology. 21: 664-71. PMID 21852137 DOI: 10.1016/j.tcb.2011.07.002  1
2011 Filichkin SA, Breton G, Priest HD, Dharmawardhana P, Jaiswal P, Fox SE, Michael TP, Chory J, Kay SA, Mockler TC. Global profiling of rice and poplar transcriptomes highlights key conserved circadian-controlled pathways and cis-regulatory modules. Plos One. 6: e16907. PMID 21694767 DOI: 10.1371/journal.pone.0016907  1
2011 Balsemão-Pires E, Jaillais Y, Olson BJ, Andrade LR, Umen JG, Chory J, Sachetto-Martins G. The Arabidopsis translocator protein (AtTSPO) is regulated at multiple levels in response to salt stress and perturbations in tetrapyrrole metabolism. Bmc Plant Biology. 11: 108. PMID 21689410 DOI: 10.1186/1471-2229-11-108  0.96
2011 Hothorn M, Belkhadir Y, Dreux M, Dabi T, Noel JP, Wilson IA, Chory J. Structural basis of steroid hormone perception by the receptor kinase BRI1. Nature. 474: 467-71. PMID 21666665 DOI: 10.1038/nature10153  1
2011 Woodson JD, Perez-Ruiz JM, Chory J. Heme synthesis by plastid ferrochelatase I regulates nuclear gene expression in plants. Current Biology : Cb. 21: 897-903. PMID 21565502 DOI: 10.1016/j.cub.2011.04.004  1
2011 Wu G, Wang X, Li X, Kamiya Y, Otegui MS, Chory J. Methylation of a phosphatase specifies dephosphorylation and degradation of activated brassinosteroid receptors. Science Signaling. 4: ra29. PMID 21558554 DOI: 10.1126/scisignal.2001258  1
2011 Jaillais Y, Belkhadir Y, Balsemão-Pires E, Dangl JL, Chory J. Extracellular leucine-rich repeats as a platform for receptor/coreceptor complex formation. Proceedings of the National Academy of Sciences of the United States of America. 108: 8503-7. PMID 21464298 DOI: 10.1073/pnas.1103556108  1
2011 Keller MM, Jaillais Y, Pedmale UV, Moreno JE, Chory J, Ballaré CL. Cryptochrome 1 and phytochrome B control shade-avoidance responses in Arabidopsis via partially independent hormonal cascades. The Plant Journal : For Cell and Molecular Biology. 67: 195-207. PMID 21457375 DOI: 10.1111/j.1365-313X.2011.04598.x  1
2011 Jaillais Y, Hothorn M, Belkhadir Y, Dabi T, Nimchuk ZL, Meyerowitz EM, Chory J. Tyrosine phosphorylation controls brassinosteroid receptor activation by triggering membrane release of its kinase inhibitor. Genes & Development. 25: 232-7. PMID 21289069 DOI: 10.1101/gad.2001911  1
2011 Cole B, Kay SA, Chory J. Automated analysis of hypocotyl growth dynamics during shade avoidance in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 65: 991-1000. PMID 21288269 DOI: 10.1111/j.1365-313X.2010.04476.x  1
2011 Hacham Y, Holland N, Butterfield C, Ubeda-Tomas S, Bennett MJ, Chory J, Savaldi-Goldstein S. Brassinosteroid perception in the epidermis controls root meristem size. Development (Cambridge, England). 138: 839-48. PMID 21270053 DOI: 10.1242/dev.061804  1
2011 Skylar A, Sung F, Hong F, Chory J, Wu X. Metabolic sugar signal promotes Arabidopsis meristematic proliferation via G2. Developmental Biology. 351: 82-9. PMID 21185286 DOI: 10.1016/j.ydbio.2010.12.019  0.88
2010 Chen M, Galvão RM, Li M, Burger B, Bugea J, Bolado J, Chory J. Arabidopsis HEMERA/pTAC12 initiates photomorphogenesis by phytochromes. Cell. 141: 1230-40. PMID 20603003 DOI: 10.1016/j.cell.2010.05.007  1
2010 Isono E, Katsiarimpa A, Müller IK, Anzenberger F, Stierhof YD, Geldner N, Chory J, Schwechheimer C. The deubiquitinating enzyme AMSH3 is required for intracellular trafficking and vacuole biogenesis in Arabidopsis thaliana. The Plant Cell. 22: 1826-37. PMID 20543027 DOI: 10.1105/tpc.110.075952  0.92
2010 Todesco M, Balasubramanian S, Hu TT, Traw MB, Horton M, Epple P, Kuhns C, Sureshkumar S, Schwartz C, Lanz C, Laitinen RA, Huang Y, Chory J, Lipka V, Borevitz JO, et al. Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana. Nature. 465: 632-6. PMID 20520716 DOI: 10.1038/nature09083  1
2010 Jaillais Y, Chory J. Unraveling the paradoxes of plant hormone signaling integration. Nature Structural & Molecular Biology. 17: 642-5. PMID 20520656 DOI: 10.1038/nsmb0610-642  0.96
2010 Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, ... ... Chory J, et al. Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature. 465: 627-31. PMID 20336072 DOI: 10.1038/nature08800  1
2010 Skylar A, Hong F, Chory J, Weigel D, Wu X. STIMPY mediates cytokinin signaling during shoot meristem establishment in Arabidopsis seedlings. Development (Cambridge, England). 137: 541-9. PMID 20110319 DOI: 10.1242/dev.041426  0.96
2010 Jung HS, Chory J. Signaling between chloroplasts and the nucleus: can a systems biology approach bring clarity to a complex and highly regulated pathway? Plant Physiology. 152: 453-9. PMID 19933385 DOI: 10.1104/pp.109.149070  0.56
2010 Nishimura N, Sarkeshik A, Nito K, Park SY, Wang A, Carvalho PC, Lee S, Caddell DF, Cutler SR, Chory J, Yates JR, Schroeder JI. PYR/PYL/RCAR family members are major in-vivo ABI1 protein phosphatase 2C-interacting proteins in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 61: 290-9. PMID 19874541 DOI: 10.1111/j.1365-313X.2009.04054.x  0.72
2009 Ausin I, Mockler TC, Chory J, Jacobsen SE. IDN1 and IDN2 are required for de novo DNA methylation in Arabidopsis thaliana. Nature Structural & Molecular Biology. 16: 1325-7. PMID 19915591 DOI: 10.1038/nsmb.1690  0.92
2009 Pinheiro H, Samalova M, Geldner N, Chory J, Martinez A, Moore I. Genetic evidence that the higher plant Rab-D1 and Rab-D2 GTPases exhibit distinct but overlapping interactions in the early secretory pathway. Journal of Cell Science. 122: 3749-58. PMID 19789181 DOI: 10.1242/jcs.050625  1
2009 Vert G, Chory J. A toggle switch in plant nitrate uptake. Cell. 138: 1064-6. PMID 19766561 DOI: 10.1016/j.cell.2009.09.005  1
2009 Ibañes M, Fàbregas N, Chory J, Caño-Delgado AI. Brassinosteroid signaling and auxin transport are required to establish the periodic pattern of Arabidopsis shoot vascular bundles. Proceedings of the National Academy of Sciences of the United States of America. 106: 13630-5. PMID 19666540 DOI: 10.1073/pnas.0906416106  0.44
2009 Schwartz C, Balasubramanian S, Warthmann N, Michael TP, Lempe J, Sureshkumar S, Kobayashi Y, Maloof JN, Borevitz JO, Chory J, Weigel D. Cis-regulatory changes at FLOWERING LOCUS T mediate natural variation in flowering responses of Arabidopsis thaliana. Genetics. 183: 723-32, 1SI-7SI. PMID 19652183 DOI: 10.1534/genetics.109.104984  1
2009 Adhikari ND, Orler R, Chory J, Froehlich JE, Larkin RM. Porphyrins promote the association of GENOMES UNCOUPLED 4 and a Mg-chelatase subunit with chloroplast membranes. The Journal of Biological Chemistry. 284: 24783-96. PMID 19605356 DOI: 10.1074/jbc.M109.025205  1
2009 Sellaro R, Hoecker U, Yanovsky M, Chory J, Casal JJ. Synergism of red and blue light in the control of Arabidopsis gene expression and development. Current Biology : Cb. 19: 1216-20. PMID 19559617 DOI: 10.1016/j.cub.2009.05.062  0.52
2009 De Rybel B, Audenaert D, Vert G, Rozhon W, Mayerhofer J, Peelman F, Coutuer S, Denayer T, Jansen L, Nguyen L, Vanhoutte I, Beemster GT, Vleminckx K, Jonak C, Chory J, et al. Chemical inhibition of a subset of Arabidopsis thaliana GSK3-like kinases activates brassinosteroid signaling. Chemistry & Biology. 16: 594-604. PMID 19549598 DOI: 10.1016/j.chembiol.2009.04.008  1
2009 Liljegren SJ, Leslie ME, Darnielle L, Lewis MW, Taylor SM, Luo R, Geldner N, Chory J, Randazzo PA, Yanofsky MF, Ecker JR. Regulation of membrane trafficking and organ separation by the NEVERSHED ARF-GAP protein. Development (Cambridge, England). 136: 1909-18. PMID 19429787 DOI: 10.1242/dev.033605  1
2009 Pan Y, Michael TP, Hudson ME, Kay SA, Chory J, Schuler MA. Cytochrome P450 monooxygenases as reporters for circadian-regulated pathways. Plant Physiology. 150: 858-78. PMID 19386812 DOI: 10.1104/pp.108.130757  1
2009 Geldner N, Dénervaud-Tendon V, Hyman DL, Mayer U, Stierhof YD, Chory J. Rapid, combinatorial analysis of membrane compartments in intact plants with a multicolor marker set. The Plant Journal : For Cell and Molecular Biology. 59: 169-78. PMID 19309456 DOI: 10.1111/j.1365-313X.2009.03851.x  0.92
2009 Moreno JE, Tao Y, Chory J, Ballaré CL. Ecological modulation of plant defense via phytochrome control of jasmonate sensitivity. Proceedings of the National Academy of Sciences of the United States of America. 106: 4935-40. PMID 19251652 DOI: 10.1073/pnas.0900701106  0.88
2009 Balasubramanian S, Schwartz C, Singh A, Warthmann N, Kim MC, Maloof JN, Loudet O, Trainer GT, Dabi T, Borevitz JO, Chory J, Weigel D. QTL mapping in new Arabidopsis thaliana advanced intercross-recombinant inbred lines. Plos One. 4: e4318. PMID 19183806 DOI: 10.1371/journal.pone.0004318  1
2009 Li L, Yu X, Thompson A, Guo M, Yoshida S, Asami T, Chory J, Yin Y. Arabidopsis MYB30 is a direct target of BES1 and cooperates with BES1 to regulate brassinosteroid-induced gene expression. The Plant Journal : For Cell and Molecular Biology. 58: 275-86. PMID 19170933 DOI: 10.1111/j.1365-313X.2008.03778.x  1
2008 Loudet O, Michael TP, Burger BT, Le Metté C, Mockler TC, Weigel D, Chory J. A zinc knuckle protein that negatively controls morning-specific growth in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. 105: 17193-8. PMID 18971337 DOI: 10.1073/pnas.0807264105  0.96
2008 Dhonukshe P, Tanaka H, Goh T, Ebine K, Mähönen AP, Prasad K, Blilou I, Geldner N, Xu J, Uemura T, Chory J, Ueda T, Nakano A, Scheres B, Friml J. Generation of cell polarity in plants links endocytosis, auxin distribution and cell fate decisions. Nature. 456: 962-6. PMID 18953331 DOI: 10.1038/nature07409  0.92
2008 Savaldi-Goldstein S, Baiga TJ, Pojer F, Dabi T, Butterfield C, Parry G, Santner A, Dharmasiri N, Tao Y, Estelle M, Noel JP, Chory J. New auxin analogs with growth-promoting effects in intact plants reveal a chemical strategy to improve hormone delivery. Proceedings of the National Academy of Sciences of the United States of America. 105: 15190-5. PMID 18818305 DOI: 10.1073/pnas.0806324105  1
2008 Michael TP, Breton G, Hazen SP, Priest H, Mockler TC, Kay SA, Chory J. A morning-specific phytohormone gene expression program underlying rhythmic plant growth. Plos Biology. 6: e225. PMID 18798691 DOI: 10.1371/journal.pbio.0060225  1
2008 Leung DW, Otomo C, Chory J, Rosen MK. Genetically encoded photoswitching of actin assembly through the Cdc42-WASP-Arp2/3 complex pathway Proceedings of the National Academy of Sciences of the United States of America. 105: 12797-12802. PMID 18728185 DOI: 10.1073/pnas.0801232105  1
2008 Vert G, Walcher CL, Chory J, Nemhauser JL. Integration of auxin and brassinosteroid pathways by Auxin Response Factor 2. Proceedings of the National Academy of Sciences of the United States of America. 105: 9829-34. PMID 18599455 DOI: 10.1073/pnas.0803996105  1
2008 Jones AM, Chory J, Dangl JL, Estelle M, Jacobsen SE, Meyerowitz EM, Nordborg M, Weigel D. The impact of Arabidopsis on human health: diversifying our portfolio. Cell. 133: 939-43. PMID 18555767 DOI: 10.1016/j.cell.2008.05.040  0.96
2008 Yu X, Li L, Li L, Guo M, Chory J, Yin Y. Modulation of brassinosteroid-regulated gene expression by Jumonji domain-containing proteins ELF6 and REF6 in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 105: 7618-23. PMID 18467490 DOI: 10.1073/pnas.0802254105  1
2008 Tao Y, Ferrer JL, Ljung K, Pojer F, Hong F, Long JA, Li L, Moreno JE, Bowman ME, Ivans LJ, Cheng Y, Lim J, Zhao Y, Ballaré CL, Sandberg G, ... ... Chory J, et al. Rapid synthesis of auxin via a new tryptophan-dependent pathway is required for shade avoidance in plants. Cell. 133: 164-76. PMID 18394996 DOI: 10.1016/j.cell.2008.01.049  1
2008 Woodson JD, Chory J. Coordination of gene expression between organellar and nuclear genomes. Nature Reviews. Genetics. 9: 383-95. PMID 18368053 DOI: 10.1038/nrg2348  1
2008 Filiault DL, Wessinger CA, Dinneny JR, Lutes J, Borevitz JO, Weigel D, Chory J, Maloof JN. Amino acid polymorphisms in Arabidopsis phytochrome B cause differential responses to light. Proceedings of the National Academy of Sciences of the United States of America. 105: 3157-62. PMID 18287016 DOI: 10.1073/pnas.0712174105  1
2008 Michael TP, Mockler TC, Breton G, McEntee C, Byer A, Trout JD, Hazen SP, Shen R, Priest HD, Sullivan CM, Givan SA, Yanovsky M, Hong F, Kay SA, Chory J. Network discovery pipeline elucidates conserved time-of-day-specific cis-regulatory modules. Plos Genetics. 4: e14. PMID 18248097 DOI: 10.1371/journal.pgen.0040014  1
2008 Savaldi-Goldstein S, Chory J. Growth coordination and the shoot epidermis. Current Opinion in Plant Biology. 11: 42-8. PMID 18065257 DOI: 10.1016/j.pbi.2007.10.009  1
2007 Mockler TC, Michael TP, Priest HD, Shen R, Sullivan CM, Givan SA, McEntee C, Kay SA, Chory J. The DIURNAL project: DIURNAL and circadian expression profiling, model-based pattern matching, and promoter analysis. Cold Spring Harbor Symposia On Quantitative Biology. 72: 353-63. PMID 18419293 DOI: 10.1101/sqb.2007.72.006  1
2007 Breuer C, Stacey NJ, West CE, Zhao Y, Chory J, Tsukaya H, Azumi Y, Maxwell A, Roberts K, Sugimoto-Shirasu K. BIN4, a novel component of the plant DNA topoisomerase VI complex, is required for endoreduplication in Arabidopsis. The Plant Cell. 19: 3655-68. PMID 18055605 DOI: 10.1105/tpc.107.054833  1
2007 Panikashvili D, Savaldi-Goldstein S, Mandel T, Yifhar T, Franke RB, Höfer R, Schreiber L, Chory J, Aharoni A. The Arabidopsis DESPERADO/AtWBC11 transporter is required for cutin and wax secretion. Plant Physiology. 145: 1345-60. PMID 17951461 DOI: 10.1104/pp.107.105676  1
2007 Michael TP, Park S, Kim TS, Booth J, Byer A, Sun Q, Chory J, Lee K. Simple sequence repeats provide a substrate for phenotypic variation in the Neurospora crassa circadian clock. Plos One. 2: e795. PMID 17726525 DOI: 10.1371/journal.pone.0000795  0.8
2007 Wu X, Chory J, Weigel D. Combinations of WOX activities regulate tissue proliferation during Arabidopsis embryonic development. Developmental Biology. 309: 306-16. PMID 17706632 DOI: 10.1016/j.ydbio.2007.07.019  0.96
2007 Borevitz JO, Hazen SP, Michael TP, Morris GP, Baxter IR, Hu TT, Chen H, Werner JD, Nordborg M, Salt DE, Kay SA, Chory J, Weigel D, Jones JD, Ecker JR. Genome-wide patterns of single-feature polymorphism in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. 104: 12057-62. PMID 17626786 DOI: 10.1073/pnas.0705323104  1
2007 Geldner N, Hyman DL, Wang X, Schumacher K, Chory J. Endosomal signaling of plant steroid receptor kinase BRI1. Genes & Development. 21: 1598-602. PMID 17578906 DOI: 10.1101/gad.1561307  1
2007 Holton N, Caño-Delgado A, Harrison K, Montoya T, Chory J, Bishop GJ. Tomato BRASSINOSTEROID INSENSITIVE1 is required for systemin-induced root elongation in Solanum pimpinellifolium but is not essential for wound signaling. The Plant Cell. 19: 1709-17. PMID 17513502 DOI: 10.1105/tpc.106.047795  1
2007 Koussevitzky S, Nott A, Mockler TC, Hong F, Sachetto-Martins G, Surpin M, Lim J, Mittler R, Chory J. Signals from chloroplasts converge to regulate nuclear gene expression. Science (New York, N.Y.). 316: 715-9. PMID 17395793 DOI: 10.1126/science. 1140516  0.92
2007 Savaldi-Goldstein S, Peto C, Chory J. The epidermis both drives and restricts plant shoot growth. Nature. 446: 199-202. PMID 17344852 DOI: 10.1038/nature05618  1
2007 Koussevitzky S, Stanne TM, Peto CA, Giap T, Sjögren LLE, Zhao Y, Clarke AK, Chory J. An Arabidopsis thaliana virescent mutant reveals a role for ClpR1 in plastid development Plant Molecular Biology. 63: 85-96. PMID 17009084 DOI: 10.1007/s11103-006-9074-2  1
2006 Belkhadir Y, Wang X, Chory J. Arabidopsis brassinosteroid signaling pathway. Science's Stke : Signal Transduction Knowledge Environment. 2006: cm5. PMID 17148786 DOI: 10.1126/stke.3642006cm5  1
2006 Belkhadir Y, Wang X, Chory J. Brassinosteroid signaling pathway. Science's Stke : Signal Transduction Knowledge Environment. 2006: cm4. PMID 17148785 DOI: 10.1126/stke.3642006cm4  1
2006 Belkhadir Y, Chory J. Brassinosteroid signaling: a paradigm for steroid hormone signaling from the cell surface. Science (New York, N.Y.). 314: 1410-1. PMID 17138891 DOI: 10.1126/science.1134040  1
2006 Hong F, Breitling R, McEntee CW, Wittner BS, Nemhauser JL, Chory J. RankProd: a bioconductor package for detecting differentially expressed genes in meta-analysis. Bioinformatics (Oxford, England). 22: 2825-7. PMID 16982708 DOI: 10.1093/bioinformatics/btl476  0.96
2006 Nemhauser JL, Hong F, Chory J. Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. Cell. 126: 467-75. PMID 16901781 DOI: 10.1016/j.cell.2006.05.050  0.96
2006 Wang X, Chory J. Brassinosteroids regulate dissociation of BKI1, a negative regulator of BRI1 signaling, from the plasma membrane. Science (New York, N.Y.). 313: 1118-22. PMID 16857903 DOI: 10.1126/science.1127593  1
2006 Balasubramanian S, Sureshkumar S, Agrawal M, Michael TP, Wessinger C, Maloof JN, Clark R, Warthmann N, Chory J, Weigel D. The PHYTOCHROME C photoreceptor gene mediates natural variation in flowering and growth responses of Arabidopsis thaliana. Nature Genetics. 38: 711-5. PMID 16732287 DOI: 10.1038/ng1818  0.96
2006 Vert G, Chory J. Downstream nuclear events in brassinosteroid signalling. Nature. 441: 96-100. PMID 16672972 DOI: 10.1038/nature04681  1
2006 Nott A, Jung HS, Koussevitzky S, Chory J. Plastid-to-nucleus retrograde signaling Annual Review of Plant Biology. 57: 739-759. PMID 16669780 DOI: 10.1146/annurev.arplant.57.032905.105310  1
2005 Yin Y, Chory J, Baulcombe D. RNAi in transgenic plants. Current Protocols in Molecular Biology / Edited by Frederick M. Ausubel ... [Et Al.]. Unit 26.6. PMID 18265365 DOI: 10.1002/0471142727.mb2606s72  1
2005 Verdecia MA, Larkin RM, Ferrer JL, Riek R, Chory J, Noel JP. [Structure of the Mg-chelatase cofactor GUN4 reveals a novel hand-shaped fold for porphyrin binding]. MéDecine Sciences : M/S. 21: 903-4. PMID 16274634 DOI: 10.1051/medsci/20052111903  1
2005 Vert G, Nemhauser JL, Geldner N, Hong F, Chory J. Molecular mechanisms of steroid hormone signaling in plants. Annual Review of Cell and Developmental Biology. 21: 177-201. PMID 16212492 DOI: 10.1146/annurev.cellbio.21.090704.151241  1
2005 Fan J, Quan S, Orth T, Awai C, Chory J, Hu J. The Arabidopsis PEX12 gene is required for peroxisome biogenesis and is essential for development. Plant Physiology. 139: 231-9. PMID 16113209 DOI: 10.1104/pp.105.066811  0.96
2005 Mazzella MA, Arana MV, Staneloni RJ, Perelman S, Rodriguez Batiller MJ, Muschietti J, Cerdán PD, Chen K, Sánchez RA, Zhu T, Chory J, Casal JJ. Phytochrome control of the Arabidopsis transcriptome anticipates seedling exposure to light. The Plant Cell. 17: 2507-16. PMID 16024587 DOI: 10.1105/tpc.105.034322  0.72
2005 Nemhauser JL, Chory J. A new FronTIR in targeted protein degradation and plant development. Cell. 121: 970-2. PMID 15989947 DOI: 10.1016/j.cell.2005.06.020  0.96
2005 Wang X, Li X, Meisenhelder J, Hunter T, Yoshida S, Asami T, Chory J. Autoregulation and homodimerization are involved in the activation of the plant steroid receptor BRI1. Developmental Cell. 8: 855-65. PMID 15935775 DOI: 10.1016/j.devcel.2005.05.001  1
2005 Werner JD, Borevitz JO, Uhlenhaut NH, Ecker JR, Chory J, Weigel D. FRIGIDA-independent variation in flowering time of natural Arabidopsis thaliana accessions. Genetics. 170: 1197-207. PMID 15911588 DOI: 10.1534/genetics.104.036533  1
2005 Verdecia MA, Larkin RM, Ferrer JL, Riek R, Chory J, Noel JP. Structure of the Mg-chelatase cofactor GUN4 reveals a novel hand-shaped fold for porphyrin binding. Plos Biology. 3: e151. PMID 15884974 DOI: 10.1371/journal.pbio.0030151  1
2005 Chen M, Tao Y, Lim J, Shaw A, Chory J. Regulation of phytochrome B nuclear localization through light-dependent unmasking of nuclear-localization signals. Current Biology : Cb. 15: 637-42. PMID 15823535 DOI: 10.1016/j.cub.2005.02.028  1
2005 Werner JD, Borevitz JO, Warthmann N, Trainer GT, Ecker JR, Chory J, Weigel D. Quantitative trait locus mapping and DNA array hybridization identify an FLM deletion as a cause for natural flowering-time variation. Proceedings of the National Academy of Sciences of the United States of America. 102: 2460-5. PMID 15695584 DOI: 10.1073/pnas.0409474102  1
2005 Yin Y, Vafeados D, Tao Y, Yoshida S, Asami T, Chory J. A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. Cell. 120: 249-59. PMID 15680330 DOI: 10.1016/j.cell.2004.11.044  1
2005 Kinoshita T, Caño-Delgado A, Seto H, Hiranuma S, Fujioka S, Yoshida S, Chory J. Binding of brassinosteroids to the extracellular domain of plant receptor kinase BRI1. Nature. 433: 167-71. PMID 15650741 DOI: 10.1038/nature03227  0.76
2004 Chen M, Chory J, Fankhauser C. Light signal transduction in higher plants. Annual Review of Genetics. 38: 87-117. PMID 15568973 DOI: 10.1146/annurev.genet.38.072902.092259  1
2004 Russinova E, Borst JW, Kwaaitaal M, Caño-Delgado A, Yin Y, Chory J, de Vries SC. Heterodimerization and endocytosis of Arabidopsis brassinosteroid receptors BRI1 and AtSERK3 (BAK1). The Plant Cell. 16: 3216-29. PMID 15548744 DOI: 10.1105/tpc.104.025387  1
2004 Caño-Delgado A, Yin Y, Yu C, Vafeados D, Mora-García S, Cheng JC, Nam KH, Li J, Chory J. BRL1 and BRL3 are novel brassinosteroid receptors that function in vascular differentiation in Arabidopsis. Development (Cambridge, England). 131: 5341-51. PMID 15486337 DOI: 10.1242/dev.01403  1
2004 Nemhauser JL, Mockler TC, Chory J. Interdependency of brassinosteroid and auxin signaling in Arabidopsis. Plos Biology. 2: E258. PMID 15328536 DOI: 10.1371/journal.pbio.0020258  0.96
2004 Mockler TC, Yu X, Shalitin D, Parikh D, Michael TP, Liou J, Huang J, Smith Z, Alonso JM, Ecker JR, Chory J, Lin C. Regulation of flowering time in Arabidopsis by K homology domain proteins. Proceedings of the National Academy of Sciences of the United States of America. 101: 12759-64. PMID 15310842 DOI: 10.1073/pnas.0404552101  1
2004 Wolyn DJ, Borevitz JO, Loudet O, Schwartz C, Maloof J, Ecker JR, Berry CC, Chory J. Light-response quantitative trait loci identified with composite interval and eXtreme array mapping in Arabidopsis thaliana. Genetics. 167: 907-17. PMID 15238539 DOI: 10.1534/genetics.103.024810  1
2004 Borevitz JO, Chory J. Genomics tools for QTL analysis and gene discovery. Current Opinion in Plant Biology. 7: 132-6. PMID 15003212 DOI: 10.1016/j.pbi.2004.01.011  1
2004 Mora-García S, Vert G, Yin Y, Caño-Delgado A, Cheong H, Chory J. Nuclear protein phosphatases with Kelch-repeat domains modulate the response to brassinosteroids in Arabidopsis. Genes & Development. 18: 448-60. PMID 14977918 DOI: 10.1101/gad.1174204  1
2004 Nemhauser JL, Chory J. BRing it on: new insights into the mechanism of brassinosteroid action. Journal of Experimental Botany. 55: 265-70. PMID 14673032 DOI: 10.1093/jxb/erh024  0.96
2003 Lariguet P, Boccalandro HE, Alonso JM, Ecker JR, Chory J, Casal JJ, Fankhauser C. A growth regulatory loop that provides homeostasis to phytochrome a signaling. The Plant Cell. 15: 2966-78. PMID 14615593 DOI: 10.1105/tpc.014563  1
2003 Chen M, Schwab R, Chory J. Characterization of the requirements for localization of phytochrome B to nuclear bodies. Proceedings of the National Academy of Sciences of the United States of America. 100: 14493-8. PMID 14612575 DOI: 10.1073/pnas.1935989100  1
2003 Maxwell BB, Andersson CR, Poole DS, Kay SA, Chory J. HY5, Circadian Clock-Associated 1, and a cis-element, DET1 dark response element, mediate DET1 regulation of chlorophyll a/b-binding protein 2 expression. Plant Physiology. 133: 1565-77. PMID 14563928 DOI: 10.1104/pp.103.025114  1
2003 Zhao Y, Dai X, Blackwell HE, Schreiber SL, Chory J. SIR1, an upstream component in auxin signaling identified by chemical genetics. Science (New York, N.Y.). 301: 1107-10. PMID 12893885 DOI: 10.1126/science.1084161  1
2003 Cerdán PD, Chory J. Regulation of flowering time by light quality. Nature. 423: 881-5. PMID 12815435 DOI: 10.1038/nature01636  0.4
2003 Nemhauser JL, Maloof JN, Chory J. Building integrated models of plant growth and development. Plant Physiology. 132: 436-9. PMID 12805576 DOI: 10.1104/pp.102.017061  0.96
2003 Borevitz JO, Liang D, Plouffe D, Chang HS, Zhu T, Weigel D, Berry CC, Winzeler E, Chory J. Large-scale identification of single-feature polymorphisms in complex genomes. Genome Research. 13: 513-23. PMID 12618383 DOI: 10.1101/gr.541303  1
2003 Larkin RM, Alonso JM, Ecker JR, Chory J. GUN4, a regulator of chlorophyll synthesis and intracellular signaling. Science (New York, N.Y.). 299: 902-6. PMID 12574634 DOI: 10.1126/science.1079978  1
2003 Staiger D, Allenbach L, Salathia N, Fiechter V, Davis SJ, Millar AJ, Chory J, Fankhauser C. The Arabidopsis SRR1 gene mediates phyB signaling and is required for normal circadian clock function. Genes & Development. 17: 256-68. PMID 12533513 DOI: 10.1101/gad.244103  1
2003 Strand A, Asami T, Alonso J, Ecker JR, Chory J. Chloroplast to nucleus communication triggered by accumulation of Mg-protoporphyrinix Nature. 421: 79-83. PMID 12511958 DOI: 10.1038/nature01204  1
2002 Nemhauser J, Chory J. Photomorphogenesis. The Arabidopsis Book / American Society of Plant Biologists. 1: e0054. PMID 22303211 DOI: 10.1199/tab.0054  0.96
2002 Thummel CS, Chory J. Steroid signaling in plants and insects--common themes, different pathways. Genes & Development. 16: 3113-29. PMID 12502734 DOI: 10.1101/gad.1042102  1
2002 Zhao Y, Hull AK, Gupta NR, Goss KA, Alonso J, Ecker JR, Normanly J, Chory J, Celenza JL. Trp-dependent auxin biosynthesis in Arabidopsis: Involvement of cytochrome P450s CYP79B2 and CYP79B3 Genes and Development. 16: 3100-3112. PMID 12464638 DOI: 10.1101/gad.1035402  1
2002 Beachy R, Bennetzen JL, Chassy BM, Chrispeels M, Chory J, Ecker JR, Noel JP, Kay SA, Dean C, Lamb C, Jones J, Santerre CR, Schroeder JI, Umen J, Yanofsky M, et al. Divergent perspectives on GM food. Nature Biotechnology. 20: 1195-6; author reply. PMID 12454665 DOI: 10.1038/nbt1202-1195  1
2002 Friedrichsen DM, Nemhauser J, Muramitsu T, Maloof JN, Alonso J, Ecker JR, Furuya M, Chory J. Three redundant brassinosteroid early response genes encode putative bHLH transcription factors required for normal growth Genetics. 162: 1445-1456. PMID 12454087  1
2002 Schroeder DF, Gahrtz M, Maxwell BB, Cook RK, Kan JM, Alonso JM, Ecker JR, Chory J. De-etiolated 1 and damaged DNA binding protein 1 interact to regulate Arabidopsis photomorphogenesis Current Biology. 12: 1462-1472. PMID 12225661 DOI: 10.1016/S0960-9822(02)01106-5  1
2002 Hu J, Aguirre M, Peto C, Alonso J, Ecker J, Chory J. A role for peroxisomes in photomorphogenesis and development of Arabidopsis. Science (New York, N.Y.). 297: 405-9. PMID 12130786 DOI: 10.1126/science.1073633  0.96
2002 Yin Y, Cheong H, Friedrichsen D, Zhao Y, Hu J, Mora-Garcia S, Chory J. A crucial role for the putative Arabidopsis topoisomerase VI in plant growth and development. Proceedings of the National Academy of Sciences of the United States of America. 99: 10191-6. PMID 12119417 DOI: 10.1073/pnas.152337599  1
2002 Yin Y, Wu D, Chory J. Plant receptor kinases: systemin receptor identified. Proceedings of the National Academy of Sciences of the United States of America. 99: 9090-2. PMID 12093928 DOI: 10.1073/pnas.152330799  1
2002 Surpin M, Larkin RM, Chory J. Signal transduction between the chloroplast and the nucleus. The Plant Cell. 14: S327-38. PMID 12045286  1
2002 Yin Y, Wang ZY, Mora-Garcia S, Li J, Yoshida S, Asami T, Chory J. BES1 accumulates in the nucleus in response to brassinosteroids to regulate gene expression and promote stem elongation. Cell. 109: 181-91. PMID 12007405  1
2002 Wang ZY, Nakano T, Gendron J, He J, Chen M, Vafeados D, Yang Y, Fujioka S, Yoshida S, Asami T, Chory J. Nuclear-localized BZR1 mediates brassinosteroid-induced growth and feedback suppression of brassinosteroid biosynthesis. Developmental Cell. 2: 505-13. PMID 11970900  1
2002 Borevitz JO, Maloof JN, Lutes J, Dabi T, Redfern JL, Trainer GT, Werner JD, Asami T, Berry CC, Weigel D, Chory J. Quantitative trait loci controlling light and hormone response in two accessions of Arabidopsis thaliana. Genetics. 160: 683-96. PMID 11861571  1
2002 Nordborg M, Borevitz JO, Bergelson J, Berry CC, Chory J, Hagenblad J, Kreitman M, Maloof JN, Noyes T, Oefner PJ, Stahl EA, Weigel D. The extent of linkage disequilibrium in Arabidopsis thaliana. Nature Genetics. 30: 190-3. PMID 11780140 DOI: 10.1038/ng813  1
2001 Maloof JN, Borevitz JO, Dabi T, Lutes J, Nehring RB, Redfern JL, Trainer GT, Wilson JM, Asami T, Berry CC, Weigel D, Chory J. Natural variation in light sensitivity of Arabidopsis. Nature Genetics. 29: 441-6. PMID 11726931 DOI: 10.1038/ng777  1
2001 Zhao Y, Chory J. A link between the light and gibberellin signaling cascades. Developmental Cell. 1: 315-6. PMID 11702941  0.96
2001 Li J, Nam KH, Vafeados D, Chory J. BIN2, a new brassinosteroid-insensitive locus in Arabidopsis. Plant Physiology. 127: 14-22. PMID 11553730  1
2001 Gil P, Dewey E, Friml J, Zhao Y, Snowden KC, Putterill J, Palme K, Estelle M, Chory J. BIG: A calossin-like protein required for polar auxin transport in Arabidopsis Genes and Development. 15: 1985-1997. PMID 11485992 DOI: 10.1101/gad.905201  1
2001 Xing Liang Liu, Covington MF, Fankhauser C, Chory J, Wagner DR. ELF3 encodes a circadian clock-regulated nuclear protein that functions in an Arabidopsis PHYB signal transduction pathway Plant Cell. 13: 1293-1304. PMID 11402161 DOI: 10.1105/tpc.13.6.1293  1
2001 Wang ZY, Seto H, Fujioka S, Yoshida S, Chory J. BRI1 is a critical component of a plasma-membrane receptor for plant steroids. Nature. 410: 380-3. PMID 11268216 DOI: 10.1038/35066597  0.84
2001 Zhao Y, Christensen SK, Fankhauser C, Cashman JR, Cohen JD, Weigel D, Chory J. A role for flavin monooxygenase-like enzymes in auxin biosynthesis. Science (New York, N.Y.). 291: 306-9. PMID 11209081 DOI: 10.1126/science.291.5502.306  1
2000 Spiegelman JI, Mindrinos MN, Fankhauser C, Richards D, Lutes J, Chory J, Oefner PJ. Cloning of the Arabidopsis RSF1 gene by using a mapping strategy based on high-density DNA arrays and denaturing high-performance liquid chromatography. The Plant Cell. 12: 2485-2498. PMID 11148292  1
2000 Maloof JN, Borevitz JO, Weigel D, Chory J. Natural variation in phytochrome signaling. Seminars in Cell & Developmental Biology. 11: 523-30. PMID 11145882 DOI: 10.1006/scdb.2000.0198  1
2000 Allen GJ, Chu SP, Schumacher K, Shimazaki CT, Vafeados D, Kemper A, Hawke SD, Tallman G, Tsien RY, Harper JF, Chory J, Schroeder JI. Alteration of stimulus-specific guard cell calcium oscillations and stomatal closing in Arabidopsis det3 mutant. Science (New York, N.Y.). 289: 2338-42. PMID 11009417 DOI: 10.1126/science.289.5488.2338  1
2000 Fankhauser C, Chory J. RSF1, an Arabidopsis locus implicated in phytochrome A signaling. Plant Physiology. 124: 39-45. PMID 10982420  1
2000 Friedrichsen DM, Joazeiro CA, Li J, Hunter T, Chory J. Brassinosteroid-insensitive-1 is a ubiquitously expressed leucine-rich repeat receptor serine/threonine kinase. Plant Physiology. 123: 1247-56. PMID 10938344  1
2000 He Z, Wang ZY, Li J, Zhu Q, Lamb C, Ronald P, Chory J. Perception of brassinosteroids by the extracellular domain of the receptor kinase BRI1. Science (New York, N.Y.). 288: 2360-3. PMID 10875920  1
2000 Jarvis P, Dörmann P, Peto CA, Lutes J, Benning C, Chory J. Galactolipid deficiency and abnormal chloroplast development in the Arabidopsis MGD synthase 1 mutant. Proceedings of the National Academy of Sciences of the United States of America. 97: 8175-9. PMID 10869420 DOI: 10.1073/pnas.100132197  1
2000 Weigel D, Ahn JH, Blázquez MA, Borevitz JO, Christensen SK, Fankhauser C, Ferrándiz C, Kardailsky I, Malancharuvil EJ, Neff MM, Nguyen JT, Sato S, Wang ZY, Xia Y, Dixon RA, ... ... Chory J, et al. Activation tagging in Arabidopsis. Plant Physiology. 122: 1003-13. PMID 10759496  1
2000 Schumacher K, Chory J. Brassinosteroid signal transduction: still casting the actors. Current Opinion in Plant Biology. 3: 79-84. PMID 10679450  0.96
2000 Neff MM, Fankhauser C, Chory J. Light: an indicator of time and place. Genes & Development. 14: 257-71. PMID 10673498  1
1999 Schumacher K, Vafeados D, McCarthy M, Sze H, Wilkins T, Chory J. The Arabidopsis det3 mutant reveals a central role for the vacuolar H(+)-ATPase in plant growth and development. Genes & Development. 13: 3259-70. PMID 10617574  0.96
1999 Neff MM, Nguyen SM, Malancharuvil EJ, Fujioka S, Noguchi T, Seto H, Tsubuki M, Honda T, Takatsuto S, Yoshida S, Chory J. BAS1: A gene regulating brassinosteroid levels and light responsiveness in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 96: 15316-23. PMID 10611382  1
1999 Streatfield SJ, Weber A, Kinsman EA, Häusler RE, Li J, Post-Beittenmiller D, Kaiser WM, Pyke KA, Flügge UI, Chory J. The phosphoenolpyruvate/phosphate translocator is required for phenolic metabolism, palisade cell development, and plastid-dependent nuclear gene expression. The Plant Cell. 11: 1609-22. PMID 10488230  1
1999 Noguchi T, Fujioka S, Takatsuto S, Sakurai A, Yoshida S, Li J, Chory J. Arabidopsis det2 is defective in the conversion of (24R)-24-methylcholest-4-En-3-one to (24R)-24-methyl-5alpha-cholestan-3-one in brassinosteroid biosynthesis. Plant Physiology. 120: 833-40. PMID 10398719  1
1999 Fankhauser C, Yeh KC, Lagarias JC, Zhang H, Elich TD, Chory J. PKS1, a substrate phosphorylated by phytochrome that modulates light signaling in Arabidopsis. Science (New York, N.Y.). 284: 1539-41. PMID 10348744 DOI: 10.1126/science.284.5419.1539  1
1999 Fankhauser C, Chory J. Light receptor kinases in plants! Current Biology : Cb. 9: R123-6. PMID 10074423  1
1998 Jarvis P, Chen LJ, Li H, Peto CA, Fankhauser C, Chory J. An Arabidopsis mutant defective in the plastid general protein import apparatus. Science (New York, N.Y.). 282: 100-3. PMID 9756470  1
1998 Neff MM, Chory J. Genetic interactions between phytochrome A, phytochrome B, and cryptochrome 1 during Arabidopsis development. Plant Physiology. 118: 27-35. PMID 9733523  1
1998 Li J, Chory J. Preparation of DNA from Arabidopsis. Methods in Molecular Biology (Clifton, N.J.). 82: 55-60. PMID 9664412  1
1998 Neff MM, Neff JD, Chory J, Pepper AE. dCAPS, a simple technique for the genetic analysis of single nucleotide polymorphisms: experimental applications in Arabidopsis thaliana genetics. The Plant Journal : For Cell and Molecular Biology. 14: 387-92. PMID 9628033 DOI: 10.1046/j.1365-313X.1998.00124.x  1
1998 Reed JW, Elumalai RP, Chory J. Suppressors of an Arabidopsis thaliana phyB mutation identify genes that control light signaling and hypocotyl elongation. Genetics. 148: 1295-310. PMID 9539443  1
1997 Fankhauser C, Chory J. Light control of plant development. Annual Review of Cell and Developmental Biology. 13: 203-29. PMID 9442873 DOI: 10.1146/annurev.cellbio.13.1.203  1
1997 Fujioka S, Li J, Choi YH, Seto H, Takatsuto S, Noguchi T, Watanabe T, Kuriyama H, Yokota T, Chory J, Sakurai A. The Arabidopsis deetiolated2 mutant is blocked early in brassinosteroid biosynthesis. The Plant Cell. 9: 1951-62. PMID 9401120 DOI: 10.1105/tpc.9.11.1951  1
1997 Li J, Chory J. A putative leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. Cell. 90: 929-38. PMID 9298904  1
1997 Li J, Biswas MG, Chao A, Russell DW, Chory J. Conservation of function between mammalian and plant steroid 5α- reductases Proceedings of the National Academy of Sciences of the United States of America. 94: 3554-3559. PMID 9108014 DOI: 10.1073/pnas.94.8.3554  1
1997 Pepper AE, Chory J. Extragenic suppressors of the Arabidopsis det1 mutant identify elements of flowering-time and light-response regulatory pathways. Genetics. 145: 1125-37. PMID 9093863  0.88
1996 Fujioka S, Choi YH, Takatsuto S, Yokota T, Li J, Chory J, Sakurai A. Identification of castasterone, 6-deoxocastasterone, typhasterol and 6-deoxotyphasterol from the shoots of Arabidopsis thaliana. Plant & Cell Physiology. 37: 1201-3. PMID 9032971  1
1996 Chory J, Chatterjee M, Cook RK, Elich T, Fankhauser C, Li J, Nagpal P, Neff M, Pepper A, Poole D, Reed J, Vitart V. From seed germination to flowering, light controls plant development via the pigment phytochrome. Proceedings of the National Academy of Sciences of the United States of America. 93: 12066-71. PMID 8901532  1
1996 Reed JW, Foster KR, Morgan PW, Chory J. Phytochrome B affects responsiveness to gibberellins in Arabidopsis. Plant Physiology. 112: 337-42. PMID 8819329  1
1996 Li J, Nagpal P, Vitart V, McMorris TC, Chory J. A role for brassinosteroids in light-dependent development of Arabidopsis. Science (New York, N.Y.). 272: 398-401. PMID 8602526  1
1995 Li H, Culligan K, Dixon RA, Chory J. CUE1: A Mesophyll Cell-Specific Positive Regulator of Light-Controlled Gene Expression in Arabidopsis. The Plant Cell. 7: 1599-1610. PMID 12242356 DOI: 10.1105/tpc.7.10.1599  0.84
1995 Chory J, Cook RK, Dixon R, Elich T, Li HM, Lopez E, Mochizuki N, Nagpal P, Pepper A, Poole D. Signal-transduction pathways controlling light-regulated development in Arabidopsis. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 350: 59-65. PMID 8577851 DOI: 10.1098/rstb.1995.0138  1
1995 Chory J, Li HM, Mochizuki N. Molecular methods for isolation of signal transduction pathway mutants. Methods in Cell Biology. 49: 441-54. PMID 8531775  1
1994 Reed JW, Nagatani A, Elich TD, Fagan M, Chory J. Phytochrome A and Phytochrome B Have Overlapping but Distinct Functions in Arabidopsis Development. Plant Physiology. 104: 1139-1149. PMID 12232154  1
1994 Li HM, Altschmied L, Chory J. Arabidopsis mutants define downstream branches in the phototransduction pathway. Genes & Development. 8: 339-49. PMID 8314087  1
1994 Pepper A, Delaney T, Washburn T, Poole D, Chory J. DET1, a negative regulator of light-mediated development and gene expression in arabidopsis, encodes a novel nuclear-localized protein. Cell. 78: 109-16. PMID 8033202  1
1994 Reed JW, Chory J. Mutational analyses of light-controlled seedling development in Arabidopsis. Seminars in Cell Biology. 5: 327-34. PMID 7881072  1
1994 Chory J, Elich T, Li HM, Pepper A, Poole D, Reed J, Susek R, Vitart V, Washburn T, Furuya M. Genes controlling Arabidopsis photomorphogenesis. Biochemical Society Symposium. 60: 257-63. PMID 7639785  1
1993 Nagatani A, Reed JW, Chory J. Isolation and Initial Characterization of Arabidopsis Mutants That Are Deficient in Phytochrome A. Plant Physiology. 102: 269-277. PMID 12231818  1
1993 Reed JW, Nagpal P, Poole DS, Furuya M, Chory J. Mutations in the gene for the red/far-red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development. The Plant Cell. 5: 147-57. PMID 8453299 DOI: 10.1105/tpc.5.2.147  1
1993 Li HM, Washburn T, Chory J. Regulation of gene expression by light. Current Opinion in Cell Biology. 5: 455-60. PMID 8352963 DOI: 10.1016/0955-0674(93)90011-E  1
1993 Susek RE, Ausubel FM, Chory J. Signal transduction mutants of Arabidopsis uncouple nuclear CAB and RBCS gene expression from chloroplast development. Cell. 74: 787-99. PMID 7690685  0.88
1987 Chory J, Voytas DF, Olszewski NE, Ausubel FM. Gibberellin-Induced Changes in the Populations of Translatable mRNAs and Accumulated Polypeptides in Dwarfs of Maize and Pea. Plant Physiology. 83: 15-23. PMID 16665192  0.88
1986 Hoger JH, Chory J, Kaplan S. In vitro biosynthesis and membrane association of photosynthetic reaction center subunits from Rhodopseudomonas sphaeroides. Journal of Bacteriology. 165: 942-50. PMID 3512531  1
1985 Chory J, Muller ED, Kaplan S. DNA-directed in vitro synthesis and assembly of the form II D-ribulose-1,5-bisphosphate carboxylase/oxygenase from Rhodopseudomonas sphaeroides. Journal of Bacteriology. 161: 307-13. PMID 3918003  1
1985 Muller ED, Chory J, Kaplan S. Cloning and characterization of the gene product of the form II ribulose-1,5-bisphosphate carboxylase gene of Rhodopseudomonas sphaeroides. Journal of Bacteriology. 161: 469-72. PMID 3881398  1
1985 Donohue TJ, Chory J, Goldsand TE, Lynn SP, Kaplan S. Structure and physical map of Rhodopseudomonas sphaeroides bacteriophage RS1 DNA. Journal of Virology. 55: 147-57. PMID 2989552  1
1984 Chory J, Donohue TJ, Varga AR, Staehelin LA, Kaplan S. Induction of the photosynthetic membranes of Rhodopseudomonas sphaeroides: biochemical and morphological studies. Journal of Bacteriology. 159: 540-54. PMID 6611335  1
1983 Chory J, Kaplan S. Light-dependent regulation of the synthesis of soluble and intracytoplasmic membrane proteins of Rhodopseudomonas sphaeroides. Journal of Bacteriology. 153: 465-74. PMID 6600232  1
1982 Chory J, Kaplan S. The in vitro transcription-translation of DNA and RNA templates by extracts of Rhodopseudomonas sphaeroides. Optimization and comparison of template specificity with Escherichia coli extracts and in vivo synthesis. The Journal of Biological Chemistry. 257: 15110-21. PMID 6184370  1
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