Thomas C. Kaufman - Publications

Affiliations: 
Biology Indiana University, Bloomington, Bloomington, IN, United States 
Area:
genetic basis of development

149 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Eisman RC, Phelps MA, Kaufman TC. The End of a Monolith: Deconstructing the Cnn-Polo interaction. Fly. 0. PMID 27096551 DOI: 10.1080/19336934.2016.1178419  0.88
2015 Eisman RC, Phelps MA, Kaufman T. An Amino-Terminal Polo Kinase Interaction Motif Acts in the Regulation of Centrosome Formation and Reveals a Novel Function for centrosomin (cnn) in Drosophila. Genetics. 201: 685-706. PMID 26447129 DOI: 10.1534/genetics.115.181842  1
2015 Akbari OS, Bellen HJ, Bier E, Bullock SL, Burt A, Church GM, Cook KR, Duchek P, Edwards OR, Esvelt KM, Gantz VM, Golic KG, Gratz SJ, Harrison MM, Hayes KR, ... ... Kaufman TC, et al. BIOSAFETY. Safeguarding gene drive experiments in the laboratory. Science (New York, N.Y.). 349: 927-9. PMID 26229113 DOI: 10.1126/science.aac7932  0.92
2015 Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Russo SM, Gelbart WM. Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data. G3 (Bethesda, Md.). PMID 26109357 DOI: 10.1534/g3.115.018929  0.44
2015 Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM. Gene Model Annotations for Drosophila melanogaster: The Rule-Benders. G3 (Bethesda, Md.). PMID 26109356 DOI: 10.1534/g3.115.018937  0.44
2015 dos Santos G, Schroeder AJ, Goodman JL, Strelets VB, Crosby MA, Thurmond J, Emmert DB, Gelbart WM. FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations. Nucleic Acids Research. 43: D690-7. PMID 25398896 DOI: 10.1093/nar/gku1099  0.4
2014 Gerstein MB, Rozowsky J, Yan KK, Wang D, Cheng C, Brown JB, Davis CA, Hillier L, Sisu C, Li JJ, Pei B, Harmanci AO, Duff MO, Djebali S, Alexander RP, ... ... Kaufman TC, et al. Comparative analysis of the transcriptome across distant species. Nature. 512: 445-8. PMID 25164755 DOI: 10.1038/nature13424  1
2014 Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, et al. Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines. Genome Research. 24: 1236-50. PMID 24985917 DOI: 10.1101/gr.161554.113  1
2014 Brown JB, Boley N, Eisman R, May GE, Stoiber MH, Duff MO, Booth BW, Wen J, Park S, Suzuki AM, Wan KH, Yu C, Zhang D, Carlson JW, Cherbas L, ... ... Kaufman TC, et al. Diversity and dynamics of the Drosophila transcriptome. Nature. 512: 393-9. PMID 24670639 DOI: 10.1038/nature12962  1
2013 Eisman RC, Kaufman TC. Probing the boundaries of orthology: the unanticipated rapid evolution of Drosophila centrosomin. Genetics. 194: 903-26. PMID 23749319 DOI: 10.1534/genetics.113.152546  1
2013 Marygold SJ, Leyland PC, Seal RL, Goodman JL, Thurmond J, Strelets VB, Wilson RJ. FlyBase: improvements to the bibliography. Nucleic Acids Research. 41: D751-7. PMID 23125371 DOI: 10.1093/nar/gks1024  1
2013 Smibert P, Miura P, Westholm JO, Shenker S, May G, Duff MO, Zhang D, Eads BD, Carlson J, Brown JB, Eisman RC, Andrews J, Kaufman T, Cherbas P, Celniker SE, et al. Errata to Global patterns of tissue-specific alternative polyadenylation in drosophila [Cell Reports, 1 (2012) 277-289] Cell Reports. 3: 969. DOI: 10.1016/j.celrep.2013.03.022  1
2012 Smibert P, Miura P, Westholm JO, Shenker S, May G, Duff MO, Zhang D, Eads BD, Carlson J, Brown JB, Eisman RC, Andrews J, Kaufman T, Cherbas P, Celniker SE, et al. Global patterns of tissue-specific alternative polyadenylation in Drosophila. Cell Reports. 1: 277-89. PMID 22685694 DOI: 10.1016/j.celrep.2012.01.001  1
2012 Cook RK, Christensen SJ, Deal JA, Coburn RA, Deal ME, Gresens JM, Kaufman TC, Cook KR. The generation of chromosomal deletions to provide extensive coverage and subdivision of the Drosophila melanogaster genome. Genome Biology. 13: R21. PMID 22445104 DOI: 10.1186/gb-2012-13-3-r21  1
2012 McQuilton P, St Pierre SE, Thurmond J, Gelbart W, Brown N, Kaufman T, Matthews K, Werner-Washburne M, Cripps R, Crosby L, Dirkmaat A, Emmert D, Gramates LS, Falls K, Matthews B, et al. FlyBase 101 - The basics of navigating FlyBase Nucleic Acids Research. 40: D706-D714. PMID 22127867 DOI: 10.1093/nar/gkr1030  1
2011 Graveley BR, Brooks AN, Carlson JW, Duff MO, Landolin JM, Yang L, Artieri CG, van Baren MJ, Boley N, Booth BW, Brown JB, Cherbas L, Davis CA, Dobin A, Li R, ... ... Kaufman TC, et al. The developmental transcriptome of Drosophila melanogaster. Nature. 471: 473-9. PMID 21179090 DOI: 10.1038/nature09715  1
2011 Cherbas L, Willingham A, Zhang D, Yang L, Zou Y, Eads BD, Carlson JW, Landolin JM, Kapranov P, Dumais J, Samsonova A, Choi JH, Roberts J, Davis CA, Tang H, ... ... Kaufman TC, et al. The transcriptional diversity of 25 Drosophila cell lines. Genome Research. 21: 301-14. PMID 21177962 DOI: 10.1101/gr.112961.110  1
2011 Hoskins RA, Landolin JM, Brown JB, Sandler JE, Takahashi H, Lassmann T, Yu C, Booth BW, Zhang D, Wan KH, Yang L, Boley N, Andrews J, Kaufman TC, Graveley BR, et al. Genome-wide analysis of promoter architecture in Drosophila melanogaster. Genome Research. 21: 182-92. PMID 21177961 DOI: 10.1101/gr.112466.110  1
2010 Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, ... ... Kaufman TC, et al. Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science (New York, N.Y.). 330: 1787-97. PMID 21177974 DOI: 10.1126/science.1198374  1
2010 Holtzman S, Miller D, Eisman R, Kuwayama H, Niimi T, Kaufman T. Transgenic tools for members of the genus Drosophila with sequenced genomes. Fly. 4: 349-62. PMID 20890112  1
2010 Venken KJ, Popodi E, Holtzman SL, Schulze KL, Park S, Carlson JW, Hoskins RA, Bellen HJ, Kaufman TC. A molecularly defined duplication set for the X chromosome of Drosophila melanogaster. Genetics. 186: 1111-25. PMID 20876565 DOI: 10.1534/genetics.110.121285  1
2010 Cook RK, Deal ME, Deal JA, Garton RD, Brown CA, Ward ME, Andrade RS, Spana EP, Kaufman TC, Cook KR. A new resource for characterizing X-linked genes in Drosophila melanogaster: systematic coverage and subdivision of the X chromosome with nested, Y-linked duplications. Genetics. 186: 1095-109. PMID 20876560 DOI: 10.1534/genetics.110.123265  1
2010 Kaufman TC. Hox genes: studies from the 20th to the 21st century. Foreword. Advances in Experimental Medicine and Biology. 689: v-vii. PMID 20795317  1
2010 Robinson RA, Kellie JF, Kaufman TC, Clemmer DE. Insights into aging through measurements of the Drosophila proteome as a function of temperature. Mechanisms of Ageing and Development. 131: 584-90. PMID 20732347 DOI: 10.1016/j.mad.2010.08.004  1
2010 Cook KR, Parks AL, Jacobus LM, Kaufman TC, Matthews KA. New research resources at the Bloomington Drosophila Stock Center. Fly. 4: 88-91. PMID 20160480 DOI: 10.4161/fly.4.1.11230  1
2010 Kaufman TC. Foreword Advances in Experimental Medicine and Biology. 689: v-vii.  1
2009 Liu P, Kaufman TC. In situ hybridization of large milkweed bug (Oncopeltus) tissues. Cold Spring Harbor Protocols. 2009: pdb.prot5262. PMID 20147238 DOI: 10.1101/pdb.prot5262  1
2009 Liu P, Kaufman TC. Dissection and fixation of large milkweed bug (Oncopeltus) embryos. Cold Spring Harbor Protocols. 2009: pdb.prot5261. PMID 20147237 DOI: 10.1101/pdb.prot5261  1
2009 Liu P, Kaufman TC. Morphology and husbandry of the large milkweed bug, Oncopeltus fasciatus. Cold Spring Harbor Protocols. 2009: pdb.emo127. PMID 20147229 DOI: 10.1101/pdb.emo127  1
2009 Xun Z, Kaufman TC, Clemmer DE. Stable isotope labeling and label-free proteomics of Drosophila parkin null mutants. Journal of Proteome Research. 8: 4500-10. PMID 19705877 DOI: 10.1021/pr9006238  1
2009 Eisman RC, Phelps MA, Kaufman TC. Centrosomin: a complex mix of long and short isoforms is required for centrosome function during early development in Drosophila melanogaster. Genetics. 182: 979-97. PMID 19528326 DOI: 10.1534/genetics.109.103887  1
2009 Loevenich SN, Brunner E, King NL, Deutsch EW, Stein SE, Aebersold R, Hafen E. The Drosophila melanogaster PeptideAtlas facilitates the use of peptide data for improved fly proteomics and genome annotation. Bmc Bioinformatics. 10: 59. PMID 19210778 DOI: 10.1186/1471-2105-10-59  1
2009 Tweedie S, Ashburner M, Falls K, Leyland P, McQuilton P, Marygold S, Millburn G, Osumi-Sutherland D, Schroeder A, Seal R, Zhang H. FlyBase: enhancing Drosophila Gene Ontology annotations. Nucleic Acids Research. 37: D555-9. PMID 18948289 DOI: 10.1093/nar/gkn788  1
2008 Xun Z, Kaufman TC, Clemmer DE. Proteome response to the panneural expression of human wild-type alpha-synuclein: a Drosophila model of Parkinson's disease. Journal of Proteome Research. 7: 3911-21. PMID 18683964 DOI: 10.1021/pr800207h  1
2008 Schaeffer SW, Bhutkar A, McAllister BF, Matsuda M, Matzkin LM, O'Grady PM, Rohde C, Valente VL, Aguadé M, Anderson WW, Edwards K, Garcia AC, Goodman J, Hartigan J, Kataoka E, ... ... Kaufman TC, et al. Polytene chromosomal maps of 11 Drosophila species: the order of genomic scaffolds inferred from genetic and physical maps. Genetics. 179: 1601-55. PMID 18622037 DOI: 10.1534/genetics.107.086074  1
2008 Xun Z, Sowell RA, Kaufman TC, Clemmer DE. Quantitative proteomics of a presymptomatic A53T alpha-synuclein Drosophila model of Parkinson disease. Molecular & Cellular Proteomics : McP. 7: 1191-203. PMID 18353766 DOI: 10.1074/mcp.M700467-MCP200  1
2007 Eisman R, Kaufman TC. Cytological investigation of the mechanism of parthenogenesis in Drosophila mercatorum. Fly. 1: 317-29. PMID 18820446  1
2007 Stark A, Lin MF, Kheradpour P, Pedersen JS, Parts L, Carlson JW, Crosby MA, Rasmussen MD, Roy S, Deoras AN, Ruby JG, Brennecke J, Hodges E, ... ... Kaufman TC, et al. Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. Nature. 450: 219-32. PMID 17994088 DOI: 10.1038/nature06340  1
2007 Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/nature06341  1
2007 Marygold SJ, Roote J, Reuter G, Lambertsson A, Ashburner M, Millburn GH, Harrison PM, Yu Z, Kenmochi N, Kaufman TC, Leevers SJ, Cook KR. The ribosomal protein genes and Minute loci of Drosophila melanogaster. Genome Biology. 8: R216. PMID 17927810 DOI: 10.1186/gb-2007-8-10-r216  1
2007 Sowell RA, Hersberger KE, Kaufman TC, Clemmer DE. Examining the proteome of Drosophila across organism lifespan. Journal of Proteome Research. 6: 3637-47. PMID 17696518 DOI: 10.1021/pr070224h  1
2007 Xun Z, Sowell RA, Kaufman TC, Clemmer DE. Lifetime proteomic profiling of an A30P alpha-synuclein Drosophila model of Parkinson's disease. Journal of Proteome Research. 6: 3729-38. PMID 17683129 DOI: 10.1021/pr0700504  1
2007 Xun Z, Sowell RA, Kaufman TC, Clemmer DE. Protein expression in a Drosophila model of Parkinson's disease. Journal of Proteome Research. 6: 348-57. PMID 17203978 DOI: 10.1021/pr060488o  1
2006 Eisman RC, Stewart N, Miller D, Kaufman TC. centrosomin's beautiful sister (cbs) encodes a GRIP-domain protein that marks Golgi inheritance and functions in the centrosome cycle in Drosophila. Journal of Cell Science. 119: 3399-412. PMID 16882688 DOI: 10.1242/jcs.03088  1
2006 Blower MD, Daigle T, Kaufman T, Karpen GH. Drosophila CENP-A mutations cause a BubR1-dependent early mitotic delay without normal localization of kinetochore components. Plos Genetics. 2: e110. PMID 16839185 DOI: 10.1371/journal.pgen.0020110  1
2006 Panfilio KA, Liu PZ, Akam M, Kaufman TC. Oncopeltus fasciatus zen is essential for serosal tissue function in katatrepsis. Developmental Biology. 292: 226-43. PMID 16460723 DOI: 10.1016/j.ydbio.2005.12.028  1
2005 Liu PZ, Kaufman TC. Short and long germ segmentation: unanswered questions in the evolution of a developmental mode. Evolution & Development. 7: 629-46. PMID 16336416 DOI: 10.1111/j.1525-142X.2005.05066.x  1
2005 Angelini DR, Kaufman TC. Comparative developmental genetics and the evolution of arthropod body plans. Annual Review of Genetics. 39: 95-119. PMID 16285854 DOI: 10.1146/annurev.genet.39.073003.112310  1
2005 Angelini DR, Liu PZ, Hughes CL, Kaufman TC. Hox gene function and interaction in the milkweed bug Oncopeltus fasciatus (Hemiptera). Developmental Biology. 287: 440-55. PMID 16183053 DOI: 10.1016/j.ydbio.2005.08.010  1
2005 Angelini DR, Kaufman TC. Insect appendages and comparative ontogenetics. Developmental Biology. 286: 57-77. PMID 16112665 DOI: 10.1016/j.ydbio.2005.07.006  1
2005 Taraszka JA, Gao X, Valentine SJ, Sowell RA, Koeniger SL, Miller DF, Kaufman TC, Clemmer DE. Proteome profiling for assessing diversity: analysis of individual heads of Drosophila melanogaster using LC-ion mobility-MS. Journal of Proteome Research. 4: 1238-47. PMID 16083273 DOI: 10.1021/pr050037o  1
2005 Taraszka JA, Kurulugama R, Sowell RA, Valentine SJ, Koeniger SL, Arnold RJ, Miller DF, Kaufman TC, Clemmer DE. Mapping the proteome of Drosophila melanogaster: analysis of embryos and adult heads by LC-IMS-MS methods. Journal of Proteome Research. 4: 1223-37. PMID 16083272 DOI: 10.1021/pr050038g  1
2005 Angelini DR, Kaufman TC. Functional analyses in the milkweed bug Oncopeltus fasciatus (Hemiptera) support a role for Wnt signaling in body segmentation but not appendage development. Developmental Biology. 283: 409-23. PMID 15939417 DOI: 10.1016/j.ydbio.2005.04.034  1
2005 Liu PZ, Kaufman TC. even-skipped is not a pair-rule gene but has segmental and gap-like functions in Oncopeltus fasciatus, an intermediate germband insect. Development (Cambridge, England). 132: 2081-92. PMID 15788450 DOI: 10.1242/dev.01807  1
2005 Matthews KA, Kaufman TC, Gelbart WM. Research resources for Drosophila: the expanding universe. Nature Reviews. Genetics. 6: 179-93. PMID 15738962 DOI: 10.1038/nrg1554  1
2005 Brena C, Liu PZ, Minelli A, Kaufman TC. Abd-B expression in Porcellio scaber Latreille, 1804 (Isopoda: Crustacea): conserved pattern versus novel roles in development and evolution. Evolution & Development. 7: 42-50. PMID 15642088 DOI: 10.1111/j.1525-142X.2005.05005.x  1
2005 Drysdale RA, Crosby MA. FlyBase: genes and gene models. Nucleic Acids Research. 33: D390-5. PMID 15608223 DOI: 10.1093/nar/gki046  1
2004 Hughes CL, Liu PZ, Kaufman TC. Expression patterns of the rogue Hox genes Hox3/zen and fushi tarazu in the apterygote insect Thermobia domestica. Evolution & Development. 6: 393-401. PMID 15509221 DOI: 10.1111/j.1525-142X.2004.04048.x  1
2004 Liu PZ, Kaufman TC. Kruppel is a gap gene in the intermediate germband insect Oncopeltus fasciatus and is required for development of both blastoderm and germband-derived segments. Development (Cambridge, England). 131: 4567-79. PMID 15342481 DOI: 10.1242/dev.01311  1
2004 Angelini DR, Kaufman TC. Functional analyses in the hemipteran Oncopeltus fasciatus reveal conserved and derived aspects of appendage patterning in insects. Developmental Biology. 271: 306-21. PMID 15223336 DOI: 10.1016/j.ydbio.2004.04.005  1
2004 Sprecher SG, Müller M, Kammermeier L, Miller DF, Kaufman TC, Reichert H, Hirth F. Hox gene cross-regulatory interactions in the embryonic brain of Drosophila. Mechanisms of Development. 121: 527-36. PMID 15172684 DOI: 10.1016/j.mod.2004.04.009  1
2004 Liu PZ, Kaufman TC. Hunchback is required for suppression of abdominal identity, and for proper germband growth and segmentation in the intermediate germband insect Oncopeltus fasciatus Development. 131: 1515-1527. PMID 14998925 DOI: 10.1242/dev.01046  1
2004 Parks AL, Cook KR, Belvin M, Dompe NA, Fawcett R, Huppert K, Tan LR, Winter CG, Bogart KP, Deal JE, Deal-Herr ME, Grant D, Marcinko M, Miyazaki WY, Robertson S, ... ... Kaufman TC, et al. Systematic generation of high-resolution deletion coverage of the Drosophila melanogaster genome. Nature Genetics. 36: 288-92. PMID 14981519 DOI: 10.1038/ng1312  1
2003 Gelbart WM, Bayraktaroglu L, Bettencourt B, Campbell K, Crosby M, Emmert D, Hradecky P, Huang Y, Letovsky S, Matthews B, Russo S, Schroeder A, Smutniak F, Zhou P, Zytkovics M, ... ... Kaufman T, et al. The FlyBase database of the Drosophila genome projects and community literature Nucleic Acids Research. 31: 172-175. PMID 12519974 DOI: 10.1093/nar/gkg094  1
2002 Hughes CL, Kaufman TC. Hox genes and the evolution of the arthropod body plan. Evolution & Development. 4: 459-99. PMID 12492146 DOI: 10.1046/j.1525-142X.2002.02034.x  1
2002 Megraw TL, Kilaru S, Turner FR, Kaufman TC. The centrosome is a dynamic structure that ejects PCM flares. Journal of Cell Science. 115: 4707-18. PMID 12415014 DOI: 10.1242/jcs.00134  0.44
2002 Kaufman TC, Severson DW, Robinson GE. The Anopheles genome and comparative insect genomics. Science (New York, N.Y.). 298: 97-8. PMID 12364783 DOI: 10.1126/science.1077901  1
2002 Miller DF, Holtzman SL, Kaufman TC. Customized microinjection glass capillary needles for P-element transformations in Drosophila melanogaster. Biotechniques. 33: 366-7, 369-70, 372 p. PMID 12188189  0.36
2002 Hughes CL, Kaufman TC. Exploring myriapod segmentation: the expression patterns of even-skipped, engrailed, and wingless in a centipede. Developmental Biology. 247: 47-61. PMID 12074551 DOI: 10.1006/dbio.2002.0683  1
2002 Rogers BT, Peterson MD, Kaufman TC. The development and evolution of insect mouthparts as revealed by the expression patterns of gnathocephalic genes. Evolution & Development. 4: 96-110. PMID 12004967 DOI: 10.1046/j.1525-142X.2002.01065.x  1
2002 Hughes CL, Kaufman TC. Exploring the myriapod body plan: expression patterns of the ten Hox genes in a centipede. Development (Cambridge, England). 129: 1225-38. PMID 11874918  1
2002 Miller DFB, Holtzman SL, Kaufman TC. Customized microinjection glass capillary needles for P-element transformations in Drosophila melanogaster Biotechniques. 33: 366-375.  1
2001 Hirth F, Loop T, Egger B, Miller DF, Kaufman TC, Reichert H. Functional equivalence of Hox gene products in the specification of the tritocerebrum during embryonic brain development of Drosophila. Development (Cambridge, England). 128: 4781-8. PMID 11731458  1
2001 Abzhanov A, Holtzman S, Kaufman TC. The Drosophila proboscis is specified by two Hox genes, proboscipedia and Sex combs reduced, via repression of leg and antennal appendage genes Development. 128: 2803-2814. PMID 11526085  1
2001 Miller DFB, Holtzman SL, Kalkbrenner A, Kaufman TC. Homeotic Complex (Hox) gene regulation and homeosis in the mesoderm of the Drosophila melanogaster embryo: The roles of signal transduction and cell autonomous regulation Mechanisms of Development. 102: 17-32. PMID 11287178 DOI: 10.1016/S0925-4773(01)00300-8  1
2001 Miller DF, Rogers BT, Kalkbrenner A, Hamilton B, Holtzman SL, Kaufman T. Cross-regulation of Hox genes in the Drosophila melanogaster embryo. Mechanisms of Development. 102: 3-16. PMID 11287177 DOI: 10.1016/S0925-4773(01)00301-X  1
2001 Megraw TL, Kao LR, Kaufman TC. Zygotic development without functional mitotic centrosomes. Current Biology : Cb. 11: 116-20. PMID 11231128 DOI: 10.1016/S0960-9822(01)00017-3  1
2000 Hughes CL, Kaufman TC. A diverse approach to arthropod development. Evolution & Development. 2: 6-8. PMID 11256418 DOI: 10.1046/j.1525-142X.2000.00038.x  1
2000 Powers TP, Hogan J, Ke Z, Dymbrowski K, Wang X, Collins FH, Kaufman TC. Characterization of the Hox gene cluster in the malaria vector mosquito, Anopheles gambiae Evolution and Development. 2: 326-339. PMID 11256377 DOI: 10.1046/j.1525-142X.2000.00074.x  1
2000 Powers TP, Hogan J, Ke Z, Dymbrowski K, Wang X, Collins FH, Kaufman TC. Characterization of the Hox cluster from the mosquito Anopheles gambiae (Diptera: Culicidae). Evolution & Development. 2: 311-25. PMID 11256376 DOI: 10.1046/j.1525-142X.2000.00072.x  1
2000 Abzhanov A, Kaufman TC. Embryonic expression patterns of the Hox genes of the crayfish Procambarus clarkii (Crustacea, Decapoda) Evolution and Development. 2: 271-283. PMID 11252556 DOI: 10.1046/j.1525-142X.2000.00066.x  1
2000 Abzhanov A, Kaufman TC. Evolution of distinct expression patterns for engrailed paralogues in higher crustaceans (Malacostraca) Development Genes and Evolution. 210: 493-506. PMID 11180798  1
2000 Abzhanov A, Kaufman TC. Homologs of Drosophila appendage genes in the patterning of arthropod limbs Developmental Biology. 227: 673-689. PMID 11071783 DOI: 10.1006/dbio.2000.9904  1
2000 Megraw TL, Kaufman TC. The centrosome in Drosophila oocyte development. Current Topics in Developmental Biology. 49: 385-407. PMID 11005029  1
2000 Rusch DB, Kaufman TC. Regulation of proboscipedia in Drosophila by homeotic selector genes. Genetics. 156: 183-94. PMID 10978284  1
2000 Hughes CL, Kaufman TC. RNAi analysis of Deformed, proboscipedia and Sex combs reduced in the milkweed bug Oncopeltus fasciatus: novel roles for Hox genes in the hemipteran head. Development (Cambridge, England). 127: 3683-94. PMID 10934013  1
2000 Abzhanov A, Kaufman TC. Crustacean (malacostracan) Hox genes and the evolution of the arthropod trunk Development. 127: 2239-2249. PMID 10804167  1
1999 Abzhanov A, Popadic A, Kaufman TC. Chelicerate Hox genes and the homology of arthropod segments Evolution and Development. 1: 77-89. PMID 11324031  1
1999 Abzhanov A, Kaufman TC. Homeotic genes and the arthropod head: Expression patterns of the labial, proboscipedia, and Deformed genes in crustaceans and insects Proceedings of the National Academy of Sciences of the United States of America. 96: 10224-10229. PMID 10468590 DOI: 10.1073/pnas.96.18.10224  1
1999 Brown S, Holtzman S, Kaufman T, Denell R. Characterization of the Tribolium Deformed ortholog and its ability to directly regulate Deformed target genes in the rescue of a Drosophila Deformed null mutant. Development Genes and Evolution. 209: 389-98. PMID 10370122 DOI: 10.1007/s004270050269  1
1999 Megraw TL, Li K, Kao LR, Kaufman TC. The centrosomin protein is required for centrosome assembly and function during cleavage in Drosophila. Development (Cambridge, England). 126: 2829-39. PMID 10357928  1
1999 Peterson MD, Rogers BT, Popadi? A, Kaufman TC. The embryonic expression pattern of labial, posterior homeotic complex genes and the teashirt homologue in an apterygote insect. Development Genes and Evolution. 209: 77-90. PMID 10022951 DOI: 10.1007/s004270050230  1
1999 Abzhanov A, Kaufman TC. Novel regulation of the homeotic gene Scr associated with a crustacean leg-to-maxilliped appendage transformation Development. 126: 1121-1128. PMID 10021332  1
1998 Megraw T, Kaufman TC, Kovalick GE. Sequence and expression of Drosophila Antigen 5-related 2, a new member of the CAP gene family. Gene. 222: 297-304. PMID 9831665 DOI: 10.1016/S0378-1119(98)00489-2  1
1998 Peterson MD, Popadić A, Kaufman TC. The expression of two engrailed-related genes in an apterygote insect and a phylogenetic analysis of insect engrailed-related genes Development Genes and Evolution. 208: 547-557. PMID 9811973 DOI: 10.1007/s004270050214  1
1998 Popadic A, Abzhanov A, Rusch D, Kaufman TC. Understanding the genetic basis of morphological evolution: The role of homeotic genes in the diversification of the arthropod bauplan International Journal of Developmental Biology. 42: 453-461. PMID 9654031  1
1998 Popadíc A, Panganiban G, Rusch D, Shear WA, Kaufman TC. Molecular evidence for the gnathobasic derivation of arthropod mandibles and for the appendicular origin of the labrum and other structures. Development Genes and Evolution. 208: 142-50. PMID 9601987 DOI: 10.1007/s004270050165  1
1998 Li K, Xu EY, Cecil JK, Turner FR, Megraw TL, Kaufman TC. Drosophila centrosomin protein is required for male meiosis and assembly of the flagellar axoneme. The Journal of Cell Biology. 141: 455-67. PMID 9548723 DOI: 10.1083/jcb.141.2.455  1
1998 Máthá E, Boros I, Jósvay K, Li K, Puro J, Kaufman TC, Szabad J. The Tomaj mutant alleles of αTubulin67C reveal a requirement for the encoded maternal specific tubulin isoform in the sperm aster, the cleavage spindle apparatus and neurogenesis during embryonic development in Drosophila Journal of Cell Science. 111: 887-896. PMID 9490633  1
1998 Gelbart WM, Crosby M, Matthews B, Rindone WP, Chillemi J, Twombly SR, Emmert D, Bayraktaroglu L, Ashburner M, Drysdale RA, Whitfield EJ, Millburn GH, De Grey A, Kaufman T, Matthews K, et al. FlyBase: A Drosophila database Nucleic Acids Research. 26: 85-88. PMID 9399806 DOI: 10.1093/nar/26.1.85  1
1997 Rogers BT, Kaufman TC. Structure of the insect head in ontogeny and phylogeny: a view from Drosophila. International Review of Cytology. 174: 1-84. PMID 9161005  1
1997 Aplin AC, Kaufman TC. Homeotic transformation of legs to mouthparts by proboscipedia expression in Drosophila imaginal discs Mechanisms of Development. 62: 51-60. PMID 9106166 DOI: 10.1016/S0925-4773(96)00649-1  1
1997 Gelbart WM, Crosby M, Matthews B, Rindone WP, Chillemi J, Russo Twombly S, Emmert D, Ashburner M, Drysdale RA, Whitfield E, Millburn GH, de Grey A, Kaufman T, Matthews K, Gilbert D, et al. FlyBase: a Drosophila database. The FlyBase consortium. Nucleic Acids Research. 25: 63-6. PMID 9045212 DOI: 10.1093/nar/25.1.63  1
1997 Rogers BT, Peterson MD, Kaufman TC. Evolution of the insect body plan as revealed by the Sex combs reduced expression pattern. Development (Cambridge, England). 124: 149-57. PMID 9006076  1
1996 Rogers BT, Kaufman TC. Structure of the insect head as revealed by the EN protein pattern in developing embryos. Development (Cambridge, England). 122: 3419-32. PMID 8951058  1
1995 Cribbs DL, Benassayag C, Randazzo FM, Kaufman TC. Levels of homeotic protein function can determine developmental identity: evidence from low-level expression of the Drosophila homeotic gene proboscipedia under Hsp70 control. The Embo Journal. 14: 767-78. PMID 7882980  1
1995 Gindhart JG, Kaufman TC. Identification of Polycomb and trithorax group responsive elements in the regulatory region of the Drosophila homeotic gene Sex combs reduced. Genetics. 139: 797-814. PMID 7713433  1
1995 Gindhart JG, King AN, Kaufman TC. Characterization of the cis-regulatory region of the Drosophila homeotic gene Sex combs reduced. Genetics. 139: 781-95. PMID 7713432  1
1993 Matthews KA, Rees D, Kaufman TC. A functionally specialized alpha-tubulin is required for oocyte meiosis and cleavage mitoses in Drosophila. Development (Cambridge, England). 117: 977-91. PMID 8325246  1
1993 Randazzo FM, Seeger MA, Huss CA, Sweeney MA, Cecil JK, Kaufman TC. Structural changes in the antennapedia complex of Drosophila pseudoobscura. Genetics. 134: 319-30. PMID 8099892  1
1992 Cribbs DL, Pattatucci AM, Pultz MA, Kaufman TC. Ectopic expression of the Drosophila homeotic gene proboscipedia under Antennapedia P1 control causes dominant thoracic defects. Genetics. 132: 699-711. PMID 1361474  1
1992 Cribbs DL, Pultz MA, Johnson D, Mazzulla M, Kaufman TC. Structural complexity and evolutionary conservation of the Drosophila homeotic gene proboscipedia. The Embo Journal. 11: 1437-49. PMID 1348688  1
1992 Tamkun JW, Deuring R, Scott MP, Kissinger M, Pattatucci AM, Kaufman TC, Kennison JA. brahma: a regulator of Drosophila homeotic genes structurally related to the yeast transcriptional activator SNF2/SWI2. Cell. 68: 561-72. PMID 1346755 DOI: 10.1016/0092-8674(92)90191-E  1
1991 Baker BS, Hoff G, Kaufman TC, Wolfner MF, Hazelrigg T. The doublesex locus of Drosophila melanogaster and its flanking regions: a cytogenetic analysis. Genetics. 127: 125-38. PMID 1901816  1
1991 Chouinard S, Kaufman TC. Control of expression of the homeotic labial (lab) locus of Drosophila melanogaster: evidence for both positive and negative autogenous regulation. Development (Cambridge, England). 113: 1267-80. PMID 1687459  1
1991 Randazzo FM, Cribbs DL, Kaufman TC. Rescue and regulation of proboscipedia: a homeotic gene of the Antennapedia Complex. Development (Cambridge, England). 113: 257-71. PMID 1684932  1
1990 Matthews KA, Miller DF, Kaufman TC. Functional implications of the unusual spatial distribution of a minor alpha-tubulin isotype in Drosophila: a common thread among chordotonal ligaments, developing muscle, and testis cyst cells. Developmental Biology. 137: 171-83. PMID 2295363 DOI: 10.1016/0012-1606(90)90018-E  1
1990 Seeger MA, Kaufman TC. Molecular analysis of the bicoid gene from Drosophila pseudoobscura: identification of conserved domains within coding and noncoding regions of the bicoid mRNA. The Embo Journal. 9: 2977-87. PMID 1975239  1
1990 Kaufman TC, Seeger MA, Olsen G. Molecular and genetic organization of the antennapedia gene complex of Drosophila melanogaster. Advances in Genetics. 27: 309-62. PMID 1971986  0.96
1989 Mahaffey JW, Diederich RJ, Kaufman TC. Novel patterns of homeotic protein accumulation in the head of the Drosophila embryo. Development (Cambridge, England). 105: 167-74. PMID 2572411  1
1989 Hellen CU, de Crombrugghe M, Wimmer E, Seeger MA, Kaufman TC. Amalgamated sequences. Nature. 340: 682. PMID 2505084 DOI: 10.1038/340682a0  0.96
1989 Matthews KA, Miller DF, Kaufman TC. Developmental distribution of RNA and protein products of the Drosophila alpha-tubulin gene family. Developmental Biology. 132: 45-61. PMID 2492961 DOI: 10.1016/0012-1606(89)90203-0  1
1988 Seeger MA, Haffley L, Kaufman TC. Characterization of amalgam: a member of the immunoglobulin superfamily from Drosophila. Cell. 55: 589-600. PMID 3141062  0.96
1988 Fuller MT, Caulton JH, Hutchens JA, Kaufman TC, Raff EC. Mutations that encode partially functional beta 2 tubulin subunits have different effects on structurally different microtubule arrays. The Journal of Cell Biology. 107: 141-52. PMID 3134362  1
1988 Pultz MA, Diederich RJ, Cribbs DL, Kaufman TC. The proboscipedia locus of the Antennapedia complex: a molecular and genetic analysis. Genes & Development. 2: 901-20. PMID 2850265  1
1988 Bender M, Horikami S, Cribbs D, Kaufman TC. Identification and expression of the gap segmentation gene hunchback in Drosophila melanogaster. Developmental Genetics. 9: 715-32. PMID 2849517 DOI: 10.1002/dvg.1020090604  1
1987 Fuller MT, Caulton JH, Hutchens JA, Kaufman TC, Raff EC. Genetic analysis of microtubule structure: a beta-tubulin mutation causes the formation of aberrant microtubules in vivo and in vitro. The Journal of Cell Biology. 104: 385-94. PMID 3818786 DOI: 10.1083/jcb.104.3.385  1
1987 Mahaffey JW, Kaufman TC. Distribution of the Sex combs reduced gene products in Drosophila melanogaster. Genetics. 117: 51-60. PMID 3117618  1
1987 Bender M, Turner FR, Kaufman TC. A development genetic analysis of the gene regulator of postbithorax in Drosophila melanogaster. Developmental Biology. 119: 418-32. PMID 3100363  0.68
1987 Matthews KA, Kaufman TC. Developmental consequences of mutations in the 84B alpha-tubulin gene of Drosophila melanogaster. Developmental Biology. 119: 100-14. PMID 3098600 DOI: 10.1016/0012-1606(87)90211-9  1
1984 Weiner AJ, Scott MP, Kaufman TC. A molecular analysis of fushi tarazu, a gene in Drosophila melanogaster that encodes a product affecting embryonic segment number and cell fate. Cell. 37: 843-51. PMID 6430569  0.56
1984 Mortin MA, Kaufman TC. Developmental effects of a temperature-sensitive RNA polymerase II mutation in Drosophila melanogaster. Developmental Biology. 103: 343-54. PMID 6427038 DOI: 10.1016/0012-1606(84)90323-3  1
1984 Wakimoto BT, Turner FR, Kaufman TC. Defects in embryogenesis in mutants associated with the antennapedia gene complex of Drosophila melanogaster. Developmental Biology. 102: 147-72. PMID 6421639 DOI: 10.1016/0012-1606(84)90182-9  1
1983 Hazelrigg T, Kaufman TC. Revertants of Dominant Mutations Associated with the Antennapedia Gene Complex of DROSOPHILA MELANOGASTER: Cytology and Genetics. Genetics. 105: 581-600. PMID 17246168  1
1983 Scott MP, Weiner AJ, Hazelrigg TI, Polisky BA, Pirrotta V, Scalenghe F, Kaufman TC. The molecular organization of the Antennapedia locus of Drosophila. Cell. 35: 763-76. PMID 6418389 DOI: 10.1016/0092-8674(83)90109-5  1
1982 Mortin MA, Kaufman TC. Developmental genetics of a temperature-sensitive RNA polymerase II mutation in Drosophila melanogaster. Molecular & General Genetics : Mgg. 187: 120-5. PMID 6819424 DOI: 10.1007/BF00384394  1
1982 Raff EC, Fuller MT, Kaufman TC, Kemphues KJ, Rudolph JE, Raff RA. Regulation of tubulin gene expression during embryogenesis in Drosophila melanogaster. Cell. 28: 33-40. PMID 6802501 DOI: 10.1016/0092-8674(82)90372-5  1
1981 Wakimoto BT, Kaufman TC. Analysis of larval segmentation in lethal genotypes associated with the antennapedia gene complex in Drosophila melanogaster. Developmental Biology. 81: 51-64. PMID 6780397 DOI: 10.1016/0012-1606(81)90347-X  1
1981 Denell RE, Hummels KR, Wakimoto BT, Kaufman TC. Developmental studies of lethality associated with the antennapedia gene complex in Drosophila melanogaster. Developmental Biology. 81: 43-50. PMID 6780396 DOI: 10.1016/0012-1606(81)90346-8  1
1980 Lewis RA, Wakimoto BT, Denell RE, Kaufman TC. Genetic Analysis of the Antennapedia Gene Complex (Ant-C) and Adjacent Chromosomal Regions of DROSOPHILA MELANOGASTER. II. Polytene Chromosome Segments 84A-84B1,2. Genetics. 95: 383-97. PMID 17249042  1
1980 Kaufman TC, Lewis R, Wakimoto B. Cytogenetic Analysis of Chromosome 3 in DROSOPHILA MELANOGASTER: The Homoeotic Gene Complex in Polytene Chromosome Interval 84a-B. Genetics. 94: 115-33. PMID 17248988  1
1979 Dunn R, Hayashi S, Gillam IC, Delaney AD, Tener GM, Grigliatti TA, Kaufman TC, Suzuki DT. Genes coding for valine transfer ribonucleic acid-3b in Drosophila melanogaster. Journal of Molecular Biology. 128: 277-87. PMID 108402 DOI: 10.1016/0022-2836(79)90088-3  1
1975 Kaufman TC, Shannon MP, Shen MW, Judd BH. A revision of the cytology and ontogeny of several deficiencies in the 3A1-3C6 region of the X chromosome of Drosophila melanogaster. Genetics. 79: 265-82. PMID 805748  1
1974 Kaufman TC, Suzuki DT. Temperature-sensitive mutations in Drosophila melanogaster. XX. Lethality due to translocations. Canadian Journal of Genetics and Cytology. Journal Canadien De GéNéTique Et De Cytologie. 16: 579-92. PMID 4217215  1
1974 Grigliatti TA, White BN, Tener GM, Kaufman TC, Suzuki DT. The localization of transfer RNA5Lys genes in Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America. 71: 3527-31. PMID 4215081  0.32
1974 Grigliatti TA, White BN, Tener GM, Kaufman TC, Holden JJ, Suzuki DT. Studies on the transfer RNA genes of Drosophila. Cold Spring Harbor Symposia On Quantitative Biology. 38: 461-74. PMID 4208790  1
1973 Kaufman TC, Tasaka SE, Suzuki DT. The interaction of two complex loci, zeste and bithorax in Drosophila melanogaster. Genetics. 75: 299-321. PMID 4203579  0.8
1972 Shannon MP, Kaufman TC, Shen MW, Judd BH. Lethality patterns and morphology of selected lethal and semi-lethal mutations in the zeste-white region of Drosophila melanogaster. Genetics. 72: 615-38. PMID 4631596  1
1972 Judd BH, Shen MW, Kaufman TC. The anatomy and function of a segment of the X chromosome of Drosophila melanogaster. Genetics. 71: 139-56. PMID 4624778  1
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