| Year |
Citation |
Score |
| 2020 |
Lorton BM, Harijan RK, Burgos ES, Bonanno JB, Almo SC, Shechter D. A binary arginine methylation switch on histone H3 Arginine 2 regulates its interaction with WDR5. Biochemistry. PMID 32207970 DOI: 10.1021/Acs.Biochem.0C00035 |
0.368 |
|
| 2018 |
Odokonyero D, McMillan AW, Ramagopal UA, Toro R, Truong DP, Zhu M, Lopez MS, Somiari B, Herman M, Aziz A, Bonanno JB, Hull KG, Burley SK, Romo D, Almo SC, et al. Comparison of Alicyclobacillus acidocaldarius OSBS to its promiscuous NSAR/OSBS relatives. Biochemistry. PMID 29767960 DOI: 10.1021/Acs.Biochem.8B00088 |
0.486 |
|
| 2017 |
Ramagopal UA, Liu W, Garrett-Thomson SC, Bonanno JB, Yan Q, Srinivasan M, Wong SC, Bell A, Mankikar S, Rangan VS, Deshpande S, Korman AJ, Almo SC. Structural basis for cancer immunotherapy by the first-in-class checkpoint inhibitor ipilimumab. Proceedings of the National Academy of Sciences of the United States of America. PMID 28484017 DOI: 10.1073/Pnas.1617941114 |
0.764 |
|
| 2017 |
Hegde RP, Fedorov AA, Sauder JM, Burley SK, Almo SC, Ramagopal UA. The hidden treasure in your data: phasing with unexpected weak anomalous scatterers from routine data sets. Acta Crystallographica. Section F, Structural Biology Communications. 73: 184-195. PMID 28368276 DOI: 10.1107/S2053230X17002680 |
0.457 |
|
| 2017 |
Lázár-Molnár E, Scandiuzzi L, Basu I, Quinn T, Sylvestre E, Palmieri E, Ramagopal UA, Nathenson SG, Guha C, Almo SC. Structure-guided development of a high-affinity human Programmed Cell Death-1: Implications for tumor immunotherapy. Ebiomedicine. PMID 28233730 DOI: 10.1016/J.Ebiom.2017.02.004 |
0.503 |
|
| 2016 |
Samanta D, Guo H, Rubinstein R, Ramagopal UA, Almo SC. Structural, mutational and biophysical studies reveal a canonical mode of molecular recognition between immune receptor TIGIT and nectin-2. Molecular Immunology. 81: 151-159. PMID 27978489 DOI: 10.1016/j.molimm.2016.12.003 |
0.323 |
|
| 2016 |
Liu W, Ramagopal U, Cheng H, Bonanno JB, Toro R, Bhosle R, Zhan C, Almo SC. Crystal Structure of the Complex of Human FasL and Its Decoy Receptor DcR3. Structure (London, England : 1993). 24: 2016-2023. PMID 27806260 DOI: 10.1016/J.Str.2016.09.009 |
0.584 |
|
| 2016 |
Wang Y, Wach JY, Sheehan P, Zhong C, Zhan C, Harris R, Almo SC, Bishop J, Haggarty SJ, Ramek A, Berry KN, O'Herin C, Koehler AN, Hung AW, Young DW. Diversity-Oriented Synthesis as a Strategy for Fragment Evolution against GSK3β. Acs Medicinal Chemistry Letters. 7: 852-6. PMID 27660690 DOI: 10.1021/Acsmedchemlett.6B00230 |
0.488 |
|
| 2016 |
Zhang X, Carter MS, Vetting MW, San Francisco B, Zhao S, Al-Obaidi NF, Solbiati JO, Thiaville JJ, de Crécy-Lagard V, Jacobson MP, Almo SC, Gerlt JA. Assignment of function to a domain of unknown function: DUF1537 is a new kinase family in catabolic pathways for acid sugars. Proceedings of the National Academy of Sciences of the United States of America. PMID 27402745 DOI: 10.1073/Pnas.1605546113 |
0.524 |
|
| 2016 |
Vladimirova A, Patskovsky Y, Fedorov AA, Bonanno JB, Fedorov EV, Toro R, Hillerich B, Seidel RD, Richards NG, Almo SC, Raushel FM. Substrate Distortion and the Catalytic Reaction Mechanism of 5-Carboxyvanillate Decarboxylase. Journal of the American Chemical Society. 138: 826-36. PMID 26714575 DOI: 10.1021/Jacs.5B08251 |
0.37 |
|
| 2015 |
Liu W, Vigdorovich V, Zhan C, Patskovsky Y, Bonanno JB, Nathenson SG, Almo SC. Increased Heterologous Protein Expression in Drosophila S2 Cells for Massive Production of Immune Ligands/Receptors and Structural Analysis of Human HVEM. Molecular Biotechnology. PMID 26202493 DOI: 10.1007/S12033-015-9881-2 |
0.684 |
|
| 2015 |
Huang H, Pandya C, Liu C, Al-Obaidi NF, Wang M, Zheng L, Toews Keating S, Aono M, Love JD, Evans B, Seidel RD, Hillerich BS, Garforth SJ, Almo SC, Mariano PS, et al. Panoramic view of a superfamily of phosphatases through substrate profiling. Proceedings of the National Academy of Sciences of the United States of America. 112: E1974-83. PMID 25848029 DOI: 10.1073/Pnas.1423570112 |
0.56 |
|
| 2015 |
Zhang X, Kumar R, Vetting MW, Zhao S, Jacobson MP, Almo SC, Gerlt JA. A unique cis-3-hydroxy-l-proline dehydratase in the enolase superfamily. Journal of the American Chemical Society. 137: 1388-91. PMID 25608448 DOI: 10.1021/Ja5103986 |
0.48 |
|
| 2015 |
Vetting MW, Al-Obaidi N, Zhao S, San Francisco B, Kim J, Wichelecki DJ, Bouvier JT, Solbiati JO, Vu H, Zhang X, Rodionov DA, Love JD, Hillerich BS, Seidel RD, Quinn RJ, ... ... Almo SC, et al. Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes. Biochemistry. 54: 909-31. PMID 25540822 DOI: 10.1021/Bi501388Y |
0.506 |
|
| 2015 |
London N, Farelli JD, Brown SD, Liu C, Huang H, Korczynska M, Al-Obaidi NF, Babbitt PC, Almo SC, Allen KN, Shoichet BK. Covalent docking predicts substrates for haloalkanoate dehalogenase superfamily phosphatases. Biochemistry. 54: 528-37. PMID 25513739 DOI: 10.1021/Bi501140K |
0.54 |
|
| 2014 |
Manjasetty BA, Chance MR, Burley SK, Panjikar S, Almo SC. Crystal structure of Clostridium acetobutylicum Aspartate kinase (CaAK): An important allosteric enzyme for amino acids production. Biotechnology Reports (Amsterdam, Netherlands). 3: 73-85. PMID 25170437 DOI: 10.1016/J.Btre.2014.06.009 |
0.545 |
|
| 2014 |
Kim SJ, Fernandez-Martinez J, Sampathkumar P, Martel A, Matsui T, Tsuruta H, Weiss TM, Shi Y, Markina-Inarrairaegui A, Bonanno JB, Sauder JM, Burley SK, Chait BT, Almo SC, Rout MP, et al. Integrative structure-function mapping of the nucleoporin Nup133 suggests a conserved mechanism for membrane anchoring of the nuclear pore complex. Molecular & Cellular Proteomics : McP. 13: 2911-26. PMID 25139911 DOI: 10.1074/Mcp.M114.040915 |
0.479 |
|
| 2014 |
Liu W, Zhan C, Cheng H, Kumar PR, Bonanno JB, Nathenson SG, Almo SC. Mechanistic basis for functional promiscuity in the TNF and TNF receptor superfamilies: structure of the LIGHT:DcR3 assembly. Structure (London, England : 1993). 22: 1252-62. PMID 25087510 DOI: 10.1016/J.Str.2014.06.013 |
0.675 |
|
| 2014 |
Zhao S, Sakai A, Zhang X, Vetting MW, Kumar R, Hillerich B, San Francisco B, Solbiati J, Steves A, Brown S, Akiva E, Barber A, Seidel RD, Babbitt PC, Almo SC, et al. Prediction and characterization of enzymatic activities guided by sequence similarity and genome neighborhood networks. Elife. 3. PMID 24980702 DOI: 10.7554/Elife.03275 |
0.459 |
|
| 2014 |
Korczynska M, Xiang DF, Zhang Z, Xu C, Narindoshvili T, Kamat SS, Williams HJ, Chang SS, Kolb P, Hillerich B, Sauder JM, Burley SK, Almo SC, Swaminathan S, Shoichet BK, et al. Functional annotation and structural characterization of a novel lactonase hydrolyzing D-xylono-1,4-lactone-5-phosphate and L-arabino-1,4-lactone-5-phosphate. Biochemistry. 53: 4727-38. PMID 24955762 DOI: 10.1021/Bi500595C |
0.499 |
|
| 2014 |
Odokonyero D, Sakai A, Patskovsky Y, Malashkevich VN, Fedorov AA, Bonanno JB, Fedorov EV, Toro R, Agarwal R, Wang C, Ozerova ND, Yew WS, Sauder JM, Swaminathan S, Burley SK, ... Almo SC, et al. Loss of quaternary structure is associated with rapid sequence divergence in the OSBS family. Proceedings of the National Academy of Sciences of the United States of America. 111: 8535-40. PMID 24872444 DOI: 10.1073/Pnas.1318703111 |
0.503 |
|
| 2014 |
Barelier S, Cummings JA, Rauwerdink AM, Hitchcock DS, Farelli JD, Almo SC, Raushel FM, Allen KN, Shoichet BK. Substrate deconstruction and the nonadditivity of enzyme recognition. Journal of the American Chemical Society. 136: 7374-82. PMID 24791931 DOI: 10.1021/Ja501354Q |
0.549 |
|
| 2014 |
Donaldson TM, Cassera MB, Ho MC, Zhan C, Merino EF, Evans GB, Tyler PC, Almo SC, Schramm VL, Kim K. Inhibition and structure of Toxoplasma gondii purine nucleoside phosphorylase. Eukaryotic Cell. 13: 572-9. PMID 24585883 DOI: 10.1128/Ec.00308-13 |
0.558 |
|
| 2014 |
Scandiuzzi L, Ghosh K, Hofmeyer KA, Abadi YM, Lázár-Molnár E, Lin EY, Liu Q, Jeon H, Almo SC, Chen L, Nathenson SG, Zang X. Tissue-expressed B7-H1 critically controls intestinal inflammation. Cell Reports. 6: 625-32. PMID 24529703 DOI: 10.1016/J.Celrep.2014.01.020 |
0.487 |
|
| 2014 |
Donaldson TM, Ting LM, Zhan C, Shi W, Zheng R, Almo SC, Kim K. Structural determinants of the 5'-methylthioinosine specificity of Plasmodium purine nucleoside phosphorylase. Plos One. 9: e84384. PMID 24416224 DOI: 10.1371/Journal.Pone.0084384 |
0.556 |
|
| 2013 |
Ramagopal UA, Dulyaninova NG, Varney KM, Wilder PT, Nallamsetty S, Brenowitz M, Weber DJ, Almo SC, Bresnick AR. Structure of the S100A4/myosin-IIA complex. Bmc Structural Biology. 13: 31. PMID 24252706 DOI: 10.1186/1472-6807-13-31 |
0.301 |
|
| 2013 |
Malashkevich VN, Almo SC, Dowd TL. X-ray crystal structure of bovine 3 Glu-osteocalcin. Biochemistry. 52: 8387-92. PMID 24138653 DOI: 10.1021/bi4010254 |
0.314 |
|
| 2013 |
Odokonyero D, Ragumani S, Lopez MS, Bonanno JB, Ozerova ND, Woodard DR, Machala BW, Swaminathan S, Burley SK, Almo SC, Glasner ME. Divergent evolution of ligand binding in the o-succinylbenzoate synthase family. Biochemistry. 52: 7512-21. PMID 24060347 DOI: 10.1021/Bi401176D |
0.523 |
|
| 2013 |
Daughtry KD, Huang H, Malashkevich V, Patskovsky Y, Liu W, Ramagopal U, Sauder JM, Burley SK, Almo SC, Dunaway-Mariano D, Allen KN. Structural basis for the divergence of substrate specificity and biological function within HAD phosphatases in lipopolysaccharide and sialic acid biosynthesis. Biochemistry. 52: 5372-86. PMID 23848398 DOI: 10.1021/Bi400659K |
0.693 |
|
| 2013 |
Kim J, Xiao H, Bonanno JB, Kalyanaraman C, Brown S, Tang X, Al-Obaidi NF, Patskovsky Y, Babbitt PC, Jacobson MP, Lee YS, Almo SC. Structure-guided discovery of the metabolite carboxy-SAM that modulates tRNA function. Nature. 498: 123-6. PMID 23676670 DOI: 10.1038/Nature12180 |
0.314 |
|
| 2013 |
Almo SC, Garforth SJ, Hillerich BS, Love JD, Seidel RD, Burley SK. Protein production from the structural genomics perspective: achievements and future needs. Current Opinion in Structural Biology. 23: 335-44. PMID 23642905 DOI: 10.1016/J.Sbi.2013.02.014 |
0.498 |
|
| 2013 |
Vigdorovich V, Ramagopal UA, Lázár-Molnár E, Sylvestre E, Lee JS, Hofmeyer KA, Zang X, Nathenson SG, Almo SC. Structure and T cell inhibition properties of B7 family member, B7-H3. Structure (London, England : 1993). 21: 707-17. PMID 23583036 DOI: 10.1016/J.Str.2013.03.003 |
0.552 |
|
| 2013 |
Rubinstein R, Ramagopal UA, Nathenson SG, Almo SC, Fiser A. Functional classification of immune regulatory proteins. Structure (London, England : 1993). 21: 766-76. PMID 23583034 DOI: 10.1016/J.Str.2013.02.022 |
0.57 |
|
| 2013 |
Soniat M, Sampathkumar P, Collett G, Gizzi AS, Banu RN, Bhosle RC, Chamala S, Chowdhury S, Fiser A, Glenn AS, Hammonds J, Hillerich B, Khafizov K, Love JD, Matikainen B, ... ... Almo SC, et al. Crystal structure of human Karyopherin β2 bound to the PY-NLS of Saccharomyces cerevisiae Nab2. Journal of Structural and Functional Genomics. 14: 31-5. PMID 23535894 DOI: 10.1007/s10969-013-9150-1 |
0.326 |
|
| 2013 |
Sampathkumar P, Kim SJ, Upla P, Rice WJ, Phillips J, Timney BL, Pieper U, Bonanno JB, Fernandez-Martinez J, Hakhverdyan Z, Ketaren NE, Matsui T, Weiss TM, Stokes DL, Sauder JM, ... ... Almo SC, et al. Structure, dynamics, evolution, and function of a major scaffold component in the nuclear pore complex. Structure (London, England : 1993). 21: 560-71. PMID 23499021 DOI: 10.1016/J.Str.2013.02.005 |
0.492 |
|
| 2012 |
Warlick BP, Evans BS, Erb TJ, Ramagopal UA, Sriram J, Imker HJ, Sauder JM, Bonanno JB, Burley SK, Tabita FR, Almo SC, Sweedler JS, Gerlt JA. 1-methylthio-d-xylulose 5-phosphate methylsulfurylase: A novel route to 1-deoxy-d-xylulose 5-phosphate in Rhodospirillum rubrum Biochemistry. 51: 8324-8326. PMID 23035785 DOI: 10.1021/Bi301215G |
0.398 |
|
| 2012 |
Garside EL, Schellenberg MJ, Gesner EM, Bonanno JB, Sauder JM, Burley SK, Almo SC, Mehta G, Macmillan AM. Cas5d processes pre-crRNA and is a member of a larger family of CRISPR RNA endonucleases Rna. 18: 2020-2028. PMID 23006625 DOI: 10.1261/Rna.033100.112 |
0.421 |
|
| 2012 |
Samanta D, Ramagopal UA, Rubinstein R, Vigdorovich V, Nathenson SG, Almo SC. Structure of Nectin-2 reveals determinants of homophilic and heterophilic interactions that control cell-cell adhesion. Proceedings of the National Academy of Sciences of the United States of America. 109: 14836-40. PMID 22927415 DOI: 10.1073/Pnas.1212912109 |
0.581 |
|
| 2012 |
Sampathkumar P, Kim SJ, Manglicmot D, Bain KT, Gilmore J, Gheyi T, Phillips J, Pieper U, Fernandez-Martinez J, Franke JD, Matsui T, Tsuruta H, Atwell S, Thompson DA, Emtage JS, ... ... Almo SC, et al. Atomic structure of the nuclear pore complex targeting domain of a Nup116 homologue from the yeast, Candida glabrata. Proteins. 80: 2110-6. PMID 22544723 DOI: 10.1002/Prot.24102 |
0.529 |
|
| 2012 |
Grubmeyer C, Hansen MR, Fedorov AA, Almo SC. Structure of Salmonella typhimurium OMP synthase in a complete substrate complex. Biochemistry. 51: 4397-405. PMID 22531064 DOI: 10.1021/bi300083p |
0.304 |
|
| 2012 |
Hobbs ME, Malashkevich V, Williams HJ, Xu C, Sauder JM, Burley SK, Almo SC, Raushel FM. Structure and catalytic mechanism of LigI: insight into the amidohydrolase enzymes of cog3618 and lignin degradation. Biochemistry. 51: 3497-507. PMID 22475079 DOI: 10.1021/Bi300307B |
0.478 |
|
| 2011 |
Gerlt JA, Allen KN, Almo SC, Armstrong RN, Babbitt PC, Cronan JE, Dunaway-Mariano D, Imker HJ, Jacobson MP, Minor W, Poulter CD, Raushel FM, Sali A, Shoichet BK, Sweedler JV. The Enzyme Function Initiative. Biochemistry. 50: 9950-62. PMID 21999478 DOI: 10.1021/Bi201312U |
0.542 |
|
| 2011 |
Huang H, Patskovsky Y, Toro R, Farelli JD, Pandya C, Almo SC, Allen KN, Dunaway-Mariano D. Divergence of structure and function in the haloacid dehalogenase enzyme superfamily: Bacteroides thetaiotaomicron BT2127 is an inorganic pyrophosphatase. Biochemistry. 50: 8937-49. PMID 21894910 DOI: 10.1021/Bi201181Q |
0.605 |
|
| 2011 |
Iiams V, Desai BJ, Fedorov AA, Fedorov EV, Almo SC, Gerlt JA. Mechanism of the orotidine 5′-monophosphate decarboxylase-catalyzed reaction: Importance of residues in the orotate binding site Biochemistry. 50: 8497-8507. PMID 21870810 DOI: 10.1021/Bi2012355 |
0.311 |
|
| 2011 |
Samanta D, Mukherjee G, Ramagopal UA, Chaparro RJ, Nathenson SG, DiLorenzo TP, Almo SC. Structural and functional characterization of a single-chain peptide-MHC molecule that modulates both naive and activated CD8+ T cells. Proceedings of the National Academy of Sciences of the United States of America. 108: 13682-7. PMID 21825122 DOI: 10.1073/Pnas.1110971108 |
0.569 |
|
| 2011 |
Dulyaninova NG, Hite KM, Zencheck WD, Scudiero DA, Almo SC, Shoemaker RH, Bresnick AR. Cysteine 81 is critical for the interaction of s100a4 and myosin-IIA Biochemistry. 50: 7218-7227. PMID 21749055 DOI: 10.1021/Bi200853Y |
0.793 |
|
| 2011 |
Hall RS, Fedorov AA, Xu C, Fedorov EV, Almo SC, Raushel FM. Three-dimensional structure and catalytic mechanism of cytosine deaminase. Biochemistry. 50: 5077-85. PMID 21545144 DOI: 10.1021/Bi200483K |
0.345 |
|
| 2011 |
Roche CJ, Malashkevich V, Balazs TC, Dantsker D, Chen Q, Moreira J, Almo SC, Friedman JM, Hirsch RE. Structural and functional studies indicating altered redox properties of hemoglobin E: implications for production of bioactive nitric oxide. The Journal of Biological Chemistry. 286: 23452-66. PMID 21531715 DOI: 10.1074/Jbc.M110.183186 |
0.367 |
|
| 2011 |
Magalhães ML, Czekster CM, Guan R, Malashkevich VN, Almo SC, Levy M. Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding. Protein Science : a Publication of the Protein Society. 20: 1145-54. PMID 21520321 DOI: 10.1002/Pro.642 |
0.37 |
|
| 2011 |
Zhan C, Patskovsky Y, Yan Q, Li Z, Ramagopal U, Cheng H, Brenowitz M, Hui X, Nathenson SG, Almo SC. Decoy strategies: the structure of TL1A:DcR3 complex. Structure (London, England : 1993). 19: 162-71. PMID 21300286 DOI: 10.1016/J.Str.2010.12.004 |
0.797 |
|
| 2011 |
Cassera MB, Ho MC, Merino EF, Burgos ES, Rinaldo-Matthis A, Almo SC, Schramm VL. A high-affinity adenosine kinase from Anopheles gambiae. Biochemistry. 50: 1885-93. PMID 21247194 DOI: 10.1021/Bi101921W |
0.365 |
|
| 2011 |
Guan R, Ho MC, Almo SC, Schramm VL. Methylthioinosine phosphorylase from Pseudomonas aeruginosa. Structure and annotation of a novel enzyme in quorum sensing. Biochemistry. 50: 1247-54. PMID 21197954 DOI: 10.1021/Bi101642D |
0.398 |
|
| 2010 |
Wisedchaisri G, Dranow DM, Lie TJ, Bonanno JB, Patskovsky Y, Ozyurt SA, Sauder JM, Almo SC, Wasserman SR, Burley SK, Leigh JA, Gonen T. Structural underpinnings of nitrogen regulation by the prototypical nitrogen-responsive transcriptional factor NrpR. Structure (London, England : 1993). 18: 1512-21. PMID 21070950 DOI: 10.1016/J.Str.2010.08.014 |
0.565 |
|
| 2010 |
Sampathkumar P, Lu F, Zhao X, Li Z, Gilmore J, Bain K, Rutter ME, Gheyi T, Schwinn KD, Bonanno JB, Pieper U, Fajardo JE, Fiser A, Almo SC, Swaminathan S, et al. Structure of a putative BenF-like porin from Pseudomonas fluorescens Pf-5 at 2.6 A resolution. Proteins. 78: 3056-62. PMID 20737437 DOI: 10.1002/Prot.22829 |
0.535 |
|
| 2010 |
Tsai PC, Fan Y, Kim J, Yang L, Almo SC, Gao YQ, Raushel FM. Structural determinants for the stereoselective hydrolysis of chiral substrates by phosphotriesterase. Biochemistry. 49: 7988-97. PMID 20695627 DOI: 10.1021/Bi101058Z |
0.351 |
|
| 2010 |
Seffernick JL, Reynolds E, Fedorov AA, Fedorov E, Almo SC, Sadowsky MJ, Wackett LP. X-ray structure and mutational analysis of the atrazine Chlorohydrolase TrzN. The Journal of Biological Chemistry. 285: 30606-14. PMID 20659898 DOI: 10.1074/Jbc.M110.138677 |
0.37 |
|
| 2010 |
Lázár-Molnár E, Chen B, Sweeney KA, Wang EJ, Liu W, Lin J, Porcelli SA, Almo SC, Nathenson SG, Jacobs WR. Programmed death-1 (PD-1)-deficient mice are extraordinarily sensitive to tuberculosis. Proceedings of the National Academy of Sciences of the United States of America. 107: 13402-7. PMID 20624978 DOI: 10.1073/Pnas.1007394107 |
0.514 |
|
| 2010 |
Xiang DF, Patskovsky Y, Xu C, Fedorov AA, Fedorov EV, Sisco AA, Sauder JM, Burley SK, Almo SC, Raushel FM. Functional identification and structure determination of two novel prolidases from cog1228 in the amidohydrolase superfamily . Biochemistry. 49: 6791-803. PMID 20604542 DOI: 10.1021/Bi100897U |
0.542 |
|
| 2010 |
Li ZH, Dulyaninova NG, House RP, Almo SC, Bresnick AR. S100A4 regulates macrophage chemotaxis. Molecular Biology of the Cell. 21: 2598-610. PMID 20519440 DOI: 10.1091/Mbc.E09-07-0609 |
0.305 |
|
| 2010 |
Sedeh RS, Fedorov AA, Fedorov EV, Ono S, Matsumura F, Almo SC, Bathe M. Structure, evolutionary conservation, and conformational dynamics of Homo sapiens fascin-1, an F-actin crosslinking protein. Journal of Molecular Biology. 400: 589-604. PMID 20434460 DOI: 10.1016/J.Jmb.2010.04.043 |
0.426 |
|
| 2010 |
Malashkevich VN, Dulyaninova NG, Ramagopal UA, Liriano MA, Varney KM, Knight D, Brenowitz M, Weber DJ, Almo SC, Bresnick AR. Phenothiazines inhibit S100A4 function by inducing protein oligomerization. Proceedings of the National Academy of Sciences of the United States of America. 107: 8605-10. PMID 20421509 DOI: 10.1073/Pnas.0913660107 |
0.401 |
|
| 2010 |
Subach OM, Malashkevich VN, Zencheck WD, Morozova KS, Piatkevich KD, Almo SC, Verkhusha VV. Structural characterization of acylimine-containing blue and red chromophores in mTagBFP and TagRFP fluorescent proteins. Chemistry & Biology. 17: 333-41. PMID 20416505 DOI: 10.1016/J.Chembiol.2010.03.005 |
0.782 |
|
| 2010 |
Wood BM, Amyes TL, Fedorov AA, Fedorov EV, Shabila A, Almo SC, Richard JP, Gerlt JA. Conformational changes in orotidine 5′-monophosphate decarboxylase: "remote" residues that stabilize the active conformation Biochemistry. 49: 3514-3516. PMID 20369850 DOI: 10.1021/Bi100443A |
0.354 |
|
| 2010 |
Ho MC, Shi W, Rinaldo-Matthis A, Tyler PC, Evans GB, Clinch K, Almo SC, Schramm VL. Four generations of transition-state analogues for human purine nucleoside phosphorylase. Proceedings of the National Academy of Sciences of the United States of America. 107: 4805-12. PMID 20212140 DOI: 10.1073/Pnas.0913439107 |
0.356 |
|
| 2010 |
Brims DR, Qian J, Jarchum I, Mikesh L, Palmieri E, Ramagopal UA, Malashkevich VN, Chaparro RJ, Lund T, Hattori M, Shabanowitz J, Hunt DF, Nathenson SG, Almo SC, Dilorenzo TP. Predominant occupation of the class I MHC molecule H-2Kwm7 with a single self-peptide suggests a mechanism for its diabetes-protective effect. International Immunology. 22: 191-203. PMID 20093428 DOI: 10.1093/Intimm/Dxp127 |
0.547 |
|
| 2010 |
Hall RS, Fedorov AA, Marti-Arbona R, Fedorov EV, Kolb P, Sauder JM, Burley SK, Shoichet BK, Almo SC, Raushel FM. The hunt for 8-oxoguanine deaminase. Journal of the American Chemical Society. 132: 1762-3. PMID 20088583 DOI: 10.1021/Ja909817D |
0.539 |
|
| 2010 |
Bhatia S, Sun K, Almo SC, Nathenson SG, Hodes RJ. Dynamic equilibrium of B7-1 dimers and monomers differentially affects immunological synapse formation and T cell activation in response to TCR/CD28 stimulation. Journal of Immunology (Baltimore, Md. : 1950). 184: 1821-8. PMID 20065109 DOI: 10.4049/Jimmunol.0902869 |
0.561 |
|
| 2010 |
Cummings JA, Nguyen TT, Fedorov AA, Kolb P, Xu C, Fedorov EV, Shoichet BK, Barondeau DP, Almo SC, Raushel FM. Structure, mechanism, and substrate profile for Sco3058: the closest bacterial homologue to human renal dipeptidase . Biochemistry. 49: 611-22. PMID 20000809 DOI: 10.1021/Bi901935Y |
0.338 |
|
| 2010 |
Sen KI, Zencheck W, Brenowitz MD, Almo SC, Bresnick AR. Regulation of Nonmuscle Myosin IIA Assembly Biophysical Journal. 98: 161a. DOI: 10.1016/J.Bpj.2009.12.869 |
0.776 |
|
| 2010 |
Almo SC, Bresnick AR, Zhang X. Mechanistic features of cell-surface adhesion receptors Handbook of Cell Signaling, 2/E. 1: 63-69. DOI: 10.1016/B978-0-12-374145-5.00010-3 |
0.565 |
|
| 2009 |
Subach FV, Malashkevich VN, Zencheck WD, Xiao H, Filonov GS, Almo SC, Verkhusha VV. Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states. Proceedings of the National Academy of Sciences of the United States of America. 106: 21097-102. PMID 19934036 DOI: 10.1073/Pnas.0909204106 |
0.781 |
|
| 2009 |
Ho MC, Sturm MB, Almo SC, Schramm VL. Transition state analogues in structures of ricin and saporin ribosome-inactivating proteins. Proceedings of the National Academy of Sciences of the United States of America. 106: 20276-81. PMID 19920175 DOI: 10.1073/Pnas.0911606106 |
0.394 |
|
| 2009 |
Rakus JF, Kalyanaraman C, Fedorov AA, Fedorov EV, Mills-Groninger FP, Toro R, Bonanno J, Bain K, Sauder JM, Burley SK, Almo SC, Jacobson MP, Gerlt JA. Computation-facilitated assignment of the function in the enolase superfamily: a regiochemically distinct galactarate dehydratase from Oceanobacillus iheyensis . Biochemistry. 48: 11546-58. PMID 19883118 DOI: 10.1021/Bi901731C |
0.58 |
|
| 2009 |
Sampaleanu LM, Bonanno JB, Ayers M, Koo J, Tammam S, Burley SK, Almo SC, Burrows LL, Howell PL. Periplasmic domains of Pseudomonas aeruginosa PilN and PilO form a stable heterodimeric complex. Journal of Molecular Biology. 394: 143-59. PMID 19857646 DOI: 10.1016/J.Jmb.2009.09.037 |
0.686 |
|
| 2009 |
Ho MC, Cassera MB, Madrid DC, Ting LM, Tyler PC, Kim K, Almo SC, Schramm VL. Structural and metabolic specificity of methylthiocoformycin for malarial adenosine deaminases. Biochemistry. 48: 9618-26. PMID 19728741 DOI: 10.1021/Bi9012484 |
0.4 |
|
| 2009 |
Nguyen TT, Fedorov AA, Williams L, Fedorov EV, Li Y, Xu C, Almo SC, Raushel FM. The mechanism of the reaction catalyzed by uronate isomerase illustrates how an isomerase may have evolved from a hydrolase within the amidohydrolase superfamily. Biochemistry. 48: 8879-90. PMID 19678710 DOI: 10.1021/Bi901046X |
0.317 |
|
| 2009 |
Burgos ES, Ho MC, Almo SC, Schramm VL. A phosphoenzyme mimic, overlapping catalytic sites and reaction coordinate motion for human NAMPT. Proceedings of the National Academy of Sciences of the United States of America. 106: 13748-53. PMID 19666527 DOI: 10.1073/Pnas.0903898106 |
0.339 |
|
| 2009 |
Alvarado JJ, Nemkal A, Sauder JM, Russell M, Akiyoshi DE, Shi W, Almo SC, Weiss LM. Structure of a microsporidian methionine aminopeptidase type 2 complexed with fumagillin and TNP-470. Molecular and Biochemical Parasitology. 168: 158-67. PMID 19660503 DOI: 10.1016/J.Molbiopara.2009.07.008 |
0.348 |
|
| 2009 |
Zhan C, Yan Q, Patskovsky Y, Li Z, Toro R, Meyer A, Cheng H, Brenowitz M, Nathenson SG, Almo SC. Biochemical and structural characterization of the human TL1A ectodomain. Biochemistry. 48: 7636-45. PMID 19522538 DOI: 10.1021/Bi900031W |
0.804 |
|
| 2009 |
Chan KK, Wood BM, Fedorov AA, Fedorov EV, Imker HJ, Amyes TL, Richard JP, Almo SC, Gerlt JA. Mechanism of the orotidine 5′-monophosphate decarboxylase-catalyzed reaction: Evidence for substrate destabilization Biochemistry. 48: 5518-5531. PMID 19435314 DOI: 10.1021/Bi900623R |
0.351 |
|
| 2009 |
Chattopadhyay K, Lazar-Molnar E, Yan Q, Rubinstein R, Zhan C, Vigdorovich V, Ramagopal UA, Bonanno J, Nathenson SG, Almo SC. Sequence, structure, function, immunity: structural genomics of costimulation. Immunological Reviews. 229: 356-86. PMID 19426233 DOI: 10.1111/J.1600-065X.2009.00778.X |
0.803 |
|
| 2009 |
Chattopadhyay K, Ramagopal UA, Nathenson SG, Almo SC. 1.8 A structure of murine GITR ligand dimer expressed in Drosophila melanogaster S2 cells. Acta Crystallographica. Section D, Biological Crystallography. 65: 434-9. PMID 19390148 DOI: 10.1107/S0907444909005721 |
0.628 |
|
| 2009 |
Zencheck WD, Xiao H, Nolen BJ, Angeletti RH, Pollard TD, Almo SC. Nucleotide- and activator-dependent structural and dynamic changes of arp2/3 complex monitored by hydrogen/deuterium exchange and mass spectrometry. Journal of Molecular Biology. 390: 414-27. PMID 19298826 DOI: 10.1016/J.Jmb.2009.03.028 |
0.797 |
|
| 2009 |
Xiang DF, Patskovsky Y, Xu C, Meyer AJ, Sauder JM, Burley SK, Almo SC, Raushel FM. Functional identification of incorrectly annotated prolidases from the amidohydrolase superfamily of enzymes. Biochemistry. 48: 3730-42. PMID 19281183 DOI: 10.1021/Bi900111Q |
0.546 |
|
| 2009 |
Gutierrez JA, Crowder T, Rinaldo-Matthis A, Ho MC, Almo SC, Schramm VL. Transition state analogs of 5'-methylthioadenosine nucleosidase disrupt quorum sensing. Nature Chemical Biology. 5: 251-7. PMID 19270684 DOI: 10.1038/Nchembio.153 |
0.3 |
|
| 2009 |
Leiman PG, Basler M, Ramagopal UA, Bonanno JB, Sauder JM, Pukatzki S, Burley SK, Almo SC, Mekalanos JJ. Type VI secretion apparatus and phage tail-associated protein complexes share a common evolutionary origin. Proceedings of the National Academy of Sciences of the United States of America. 106: 4154-9. PMID 19251641 DOI: 10.1073/Pnas.0813360106 |
0.524 |
|
| 2009 |
Sakai A, Fedorov AA, Fedorov EV, Schnoes AM, Glasner ME, Brown S, Rutter ME, Bain K, Chang S, Gheyi T, Sauder JM, Burley SK, Babbitt PC, Almo SC, Gerlt JA. Evolution of enzymatic activities in the enolase superfamily: stereochemically distinct mechanisms in two families of cis,cis-muconate lactonizing enzymes. Biochemistry. 48: 1445-53. PMID 19220063 DOI: 10.1021/Bi802277H |
0.545 |
|
| 2009 |
Pieper U, Chiang R, Seffernick JJ, Brown SD, Glasner ME, Kelly L, Eswar N, Sauder JM, Bonanno JB, Swaminathan S, Burley SK, Zheng X, Chance MR, Almo SC, Gerlt JA, et al. Target selection and annotation for the structural genomics of the amidohydrolase and enolase superfamilies. Journal of Structural and Functional Genomics. 10: 107-25. PMID 19219566 DOI: 10.1007/S10969-008-9056-5 |
0.563 |
|
| 2009 |
Xiang DF, Kolb P, Fedorov AA, Meier MM, Fedorov LV, Nguyen TT, Sterner R, Almo SC, Shoichet BK, Raushel FM. Functional annotation and three-dimensional structure of Dr0930 from Deinococcus radiodurans, a close relative of phosphotriesterase in the amidohydrolase superfamily. Biochemistry. 48: 2237-47. PMID 19159332 DOI: 10.1021/Bi802274F |
0.354 |
|
| 2009 |
Sakai A, Fedorov AA, Fedorov EV, Schnoes AM, Glasner ME, Brown S, Rutter ME, Bain K, Chang S, Gheyi T, Sauder JM, Burley SK, Babbitt PC, Almo SC, Gerlt JA. Evolution of Enzymatic Activities in the Enolase Superfamily: Stereochemically Distinct Mechanisms in Two Families ofcis,cis-Muconate Lactonizing Enzymes Biochemistry. 48: 2569-2570. DOI: 10.1021/Bi900265W |
0.423 |
|
| 2008 |
Kalyanaraman C, Imker HJ, Fedorov AA, Fedorov EV, Glasner ME, Babbitt PC, Almo SC, Gerlt JA, Jacobson MP. Discovery of a dipeptide epimerase enzymatic function guided by homology modeling and virtual screening. Structure (London, England : 1993). 16: 1668-77. PMID 19000819 DOI: 10.1016/J.Str.2008.08.015 |
0.334 |
|
| 2008 |
Rakus JF, Fedorov AA, Fedorov EV, Glasner ME, Hubbard BK, Delli JD, Babbitt PC, Almo SC, Gerlt JA. Evolution of enzymatic activities in the enolase superfamily: L-rhamnonate dehydratase Biochemistry. 47: 9944-9954. PMID 18754693 DOI: 10.1021/Bi800914R |
0.367 |
|
| 2008 |
Hudkins RL, Diebold JL, Tao M, Josef KA, Park CH, Angeles TS, Aimone LD, Husten J, Ator MA, Meyer SL, Holskin BP, Durkin JT, Fedorov AA, Fedorov EV, Almo SC, et al. Mixed-lineage kinase 1 and mixed-lineage kinase 3 subtype-selective dihydronaphthyl[3,4-a]pyrrolo[3,4-c]carbazole-5-ones: optimization, mixed-lineage kinase 1 crystallography, and oral in vivo activity in 1-methyl-4-phenyltetrahydropyridine models. Journal of Medicinal Chemistry. 51: 5680-9. PMID 18714982 DOI: 10.1021/Jm8005838 |
0.304 |
|
| 2008 |
Kim J, Tsai PC, Chen SL, Himo F, Almo SC, Raushel FM. Structure of diethyl phosphate bound to the binuclear metal center of phosphotriesterase. Biochemistry. 47: 9497-504. PMID 18702530 DOI: 10.1021/Bi800971V |
0.327 |
|
| 2008 |
Lázár-Molnár E, Yan Q, Cao E, Ramagopal U, Nathenson SG, Almo SC. Crystal structure of the complex between programmed death-1 (PD-1) and its ligand PD-L2. Proceedings of the National Academy of Sciences of the United States of America. 105: 10483-8. PMID 18641123 DOI: 10.1073/Pnas.0804453105 |
0.765 |
|
| 2008 |
Malashkevich VN, Varney KM, Garrett SC, Wilder PT, Knight D, Charpentier TH, Ramagopal UA, Almo SC, Weber DJ, Bresnick AR. Structure of Ca2+-bound S100A4 and its interaction with peptides derived from nonmuscle myosin-IIA. Biochemistry. 47: 5111-26. PMID 18410126 DOI: 10.1021/Bi702537S |
0.341 |
|
| 2008 |
Lázár-Molnár E, Gácser A, Freeman GJ, Almo SC, Nathenson SG, Nosanchuk JD. The PD-1/PD-L costimulatory pathway critically affects host resistance to the pathogenic fungus Histoplasma capsulatum. Proceedings of the National Academy of Sciences of the United States of America. 105: 2658-63. PMID 18268348 DOI: 10.1073/Pnas.0711918105 |
0.517 |
|
| 2008 |
Gräslund S, Nordlund P, Weigelt J, Hallberg BM, Bray J, Gileadi O, Knapp S, Oppermann U, Arrowsmith C, Hui R, Ming J, dhe-Paganon S, ... ... Almo SC, et al. Protein production and purification. Nature Methods. 5: 135-46. PMID 18235434 DOI: 10.1038/Nmeth.F.202 |
0.473 |
|
| 2008 |
Chattopadhyay K, Ramagopal UA, Brenowitz M, Nathenson SG, Almo SC. Evolution of GITRL immune function: murine GITRL exhibits unique structural and biochemical properties within the TNF superfamily. Proceedings of the National Academy of Sciences of the United States of America. 105: 635-40. PMID 18182486 DOI: 10.1073/Pnas.0710529105 |
0.651 |
|
| 2008 |
Chao JA, Patskovsky Y, Almo SC, Singer RH. Structural basis for the coevolution of a viral RNA-protein complex. Nature Structural & Molecular Biology. 15: 103-5. PMID 18066080 DOI: 10.1038/Nsmb1327 |
0.304 |
|
| 2007 |
Almo SC, Bonanno JB, Sauder JM, Emtage S, Dilorenzo TP, Malashkevich V, Wasserman SR, Swaminathan S, Eswaramoorthy S, Agarwal R, Kumaran D, Madegowda M, Ragumani S, Patskovsky Y, Alvarado J, et al. Structural genomics of protein phosphatases. Journal of Structural and Functional Genomics. 8: 121-40. PMID 18058037 DOI: 10.1007/S10969-007-9036-1 |
0.558 |
|
| 2007 |
Chattopadhyay K, Ramagopal UA, Mukhopadhaya A, Malashkevich VN, Dilorenzo TP, Brenowitz M, Nathenson SG, Almo SC. Assembly and structural properties of glucocorticoid-induced TNF receptor ligand: Implications for function. Proceedings of the National Academy of Sciences of the United States of America. 104: 19452-7. PMID 18040044 DOI: 10.1073/Pnas.0709264104 |
0.623 |
|
| 2007 |
Rakus JF, Fedorov AA, Fedorov EV, Glasner ME, Vick JE, Babbitt PC, Almo SC, Gerlt JA. Evolution of enzymatic activities in the enolase superfamily: D-Mannonate dehydratase from Novosphingobium aromaticivorans. Biochemistry. 46: 12896-908. PMID 17944491 DOI: 10.1021/Bi701703W |
0.331 |
|
| 2007 |
Taylor EA, Rinaldo-Matthis A, Li L, Ghanem M, Hazleton KZ, Cassera MB, Almo SC, Schramm VL. Anopheles gambiae purine nucleoside phosphorylase: catalysis, structure, and inhibition. Biochemistry. 46: 12405-15. PMID 17918964 DOI: 10.1021/Bi7010256 |
0.381 |
|
| 2007 |
Wen SY, Fedorov AA, Fedorov EV, Almo SC, Gerlt JA. Evolution of enzymatic activities in the enolase superfamily: L-talarate/galactarate dehydratase from Salmonella typhimurium LT2 Biochemistry. 46: 9564-9577. PMID 17649980 DOI: 10.1021/Bi7008882 |
0.31 |
|
| 2007 |
Song L, Kalyanaraman C, Fedorov AA, Fedorov EV, Glasner ME, Brown S, Imker HJ, Babbitt PC, Almo SC, Jacobson MP, Gerlt JA. Prediction and assignment of function for a divergent N-succinyl amino acid racemase. Nature Chemical Biology. 3: 486-91. PMID 17603539 DOI: 10.1038/Nchembio.2007.11 |
0.374 |
|
| 2007 |
Hermann JC, Marti-Arbona R, Fedorov AA, Fedorov E, Almo SC, Shoichet BK, Raushel FM. Structure-based activity prediction for an enzyme of unknown function. Nature. 448: 775-9. PMID 17603473 DOI: 10.1038/Nature05981 |
0.384 |
|
| 2007 |
Hall RS, Brown S, Fedorov AA, Fedorov EV, Xu C, Babbitt PC, Almo SC, Raushel FM. Structural diversity within the mononuclear and binuclear active sites of N-acetyl-D-glucosamine-6-phosphate deacetylase. Biochemistry. 46: 7953-62. PMID 17567048 DOI: 10.1021/Bi700544C |
0.409 |
|
| 2007 |
Yan Q, Malashkevich VN, Fedorov A, Fedorov E, Cao E, Lary JW, Cole JL, Nathenson SG, Almo SC. Structure of CD84 provides insight into SLAM family function. Proceedings of the National Academy of Sciences of the United States of America. 104: 10583-8. PMID 17563375 DOI: 10.1073/Pnas.0703893104 |
0.8 |
|
| 2007 |
McLachlan GD, Cahill SM, Girvin ME, Almo SC. Acid-induced equilibrium folding intermediate of human platelet profilin. Biochemistry. 46: 6931-43. PMID 17511469 DOI: 10.1021/Bi0602359 |
0.319 |
|
| 2007 |
Murkin AS, Birck MR, Rinaldo-Matthis A, Shi W, Taylor EA, Almo SC, Schramm VL. Neighboring group participation in the transition state of human purine nucleoside phosphorylase. Biochemistry. 46: 5038-49. PMID 17407325 DOI: 10.1021/Bi700147B |
0.311 |
|
| 2007 |
Velge P, Herler M, Johansson J, Roche SM, Témoin S, Fedorov AA, Gracieux P, Almo SC, Goebel W, Cossart P. A naturally occurring mutation K220T in the pleiotropic activator PrfA of Listeria monocytogenes results in a loss of virulence due to decreasing DNA-binding affinity. Microbiology (Reading, England). 153: 995-1005. PMID 17379709 DOI: 10.1099/Mic.0.2006/002238-0 |
0.315 |
|
| 2007 |
Cao E, Zang X, Ramagopal UA, Mukhopadhaya A, Fedorov A, Fedorov E, Zencheck WD, Lary JW, Cole JL, Deng H, Xiao H, Dilorenzo TP, Allison JP, Nathenson SG, Almo SC. T cell immunoglobulin mucin-3 crystal structure reveals a galectin-9-independent ligand-binding surface. Immunity. 26: 311-21. PMID 17363302 DOI: 10.1016/J.Immuni.2007.01.016 |
0.811 |
|
| 2007 |
Imker HJ, Fedorov AA, Fedorov EV, Almo SC, Gerlt JA. Mechanistic diversity in the RuBisCO superfamily: The "enolase" in the methionine salvage pathway in Geobacillus kaustophilus Biochemistry. 46: 4077-4089. PMID 17352497 DOI: 10.1021/Bi7000483 |
0.363 |
|
| 2007 |
Kiselar JG, Mahaffy R, Pollard TD, Almo SC, Chance MR. Visualizing Arp2/3 complex activation mediated by binding of ATP and WASp using structural mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 104: 1552-7. PMID 17251352 DOI: 10.1073/Pnas.0605380104 |
0.39 |
|
| 2007 |
Rinaldo-Matthis A, Wing C, Ghanem M, Deng H, Wu P, Gupta A, Tyler PC, Evans GB, Furneaux RH, Almo SC, Wang CC, Schramm VL. Inhibition and structure of Trichomonas vaginalis purine nucleoside phosphorylase with picomolar transition state analogues. Biochemistry. 46: 659-68. PMID 17223688 DOI: 10.1021/Bi061515R |
0.352 |
|
| 2007 |
Benchaar SA, Xie Y, Phillips M, Loo RR, Galkin VE, Orlova A, Thevis M, Muhlrad A, Almo SC, Loo JA, Egelman EH, Reisler E. Mapping the interaction of cofilin with subdomain 2 on actin. Biochemistry. 46: 225-33. PMID 17198393 DOI: 10.1021/Bi0610754 |
0.316 |
|
| 2006 |
Lazar-Molnar E, Almo SC, Nathenson SG. The interchain disulfide linkage is not a prerequisite but enhances CD28 costimulatory function. Cellular Immunology. 244: 125-9. PMID 17467674 DOI: 10.1016/J.Cellimm.2007.02.014 |
0.585 |
|
| 2006 |
Yew WS, Fedorov AA, Fedorov EV, Wood BM, Almo SC, Gerlt JA. Evolution of enzymatic activities in the enolase superfamily: D-tartrate dehydratase from Bradyrhizobium japonicum Biochemistry. 45: 14598-14608. PMID 17144653 DOI: 10.1021/Bi061688G |
0.334 |
|
| 2006 |
Yew WS, Fedorov AA, Fedorov EV, Rakus JF, Pierce RW, Almo SC, Gerlt JA. Evolution of enzymatic activities in the enolase superfamily: L-fuconate dehydratase from Xanthomonas campestris Biochemistry. 45: 14582-14597. PMID 17144652 DOI: 10.1021/Bi061687O |
0.311 |
|
| 2006 |
Singh V, Shi W, Almo SC, Evans GB, Furneaux RH, Tyler PC, Painter GF, Lenz DH, Mee S, Zheng R, Schramm VL. Structure and inhibition of a quorum sensing target from Streptococcus pneumoniae. Biochemistry. 45: 12929-41. PMID 17059210 DOI: 10.1021/Bi061184I |
0.326 |
|
| 2006 |
Cao E, Ramagopal UA, Fedorov A, Fedorov E, Yan Q, Lary JW, Cole JL, Nathenson SG, Almo SC. NTB-A receptor crystal structure: insights into homophilic interactions in the signaling lymphocytic activation molecule receptor family. Immunity. 25: 559-70. PMID 17045824 DOI: 10.1016/J.Immuni.2006.06.020 |
0.812 |
|
| 2006 |
Zhang Y, Vorobiev SM, Gibson BG, Hao B, Sidhu GS, Mishra VS, Yarmola EG, Bubb MR, Almo SC, Southwick FS. A CapG gain-of-function mutant reveals critical structural and functional determinants for actin filament severing. The Embo Journal. 25: 4458-67. PMID 16977317 DOI: 10.1038/Sj.Emboj.7601323 |
0.366 |
|
| 2006 |
Chattopadhyay K, Bhatia S, Fiser A, Almo SC, Nathenson SG. Structural basis of inducible costimulator ligand costimulatory function: determination of the cell surface oligomeric state and functional mapping of the receptor binding site of the protein. Journal of Immunology (Baltimore, Md. : 1950). 177: 3920-9. PMID 16951355 DOI: 10.4049/Jimmunol.177.6.3920 |
0.648 |
|
| 2006 |
Kim J, Malashkevich V, Roday S, Lisbin M, Schramm VL, Almo SC. Structural and kinetic characterization of Escherichia coli TadA, the wobble-specific tRNA deaminase. Biochemistry. 45: 6407-16. PMID 16700551 DOI: 10.1021/Bi0522394 |
0.358 |
|
| 2006 |
Patskovsky Y, Patskovska L, Almo SC, Listowsky I. Transition state model and mechanism of nucleophilic aromatic substitution reactions catalyzed by human glutathione S-transferase M1a-1a Biochemistry. 45: 3852-3862. PMID 16548513 DOI: 10.1021/Bi051823+ |
0.368 |
|
| 2006 |
Chiu W, Baker ML, Almo SC. Structural biology of cellular machines Trends in Cell Biology. 16: 144-150. PMID 16459078 DOI: 10.1016/J.Tcb.2006.01.002 |
0.347 |
|
| 2006 |
Bhatia S, Edidin M, Almo SC, Nathenson SG. B7-1 and B7-2: similar costimulatory ligands with different biochemical, oligomeric and signaling properties. Immunology Letters. 104: 70-5. PMID 16413062 DOI: 10.1016/J.Imlet.2005.11.019 |
0.576 |
|
| 2006 |
Roden MM, Brims DR, Fedorov AA, DiLorenzo TP, Almo SC, Nathenson SG. Structural analysis of H2-Db class I molecules containing two different allelic forms of the type 1 diabetes susceptibility factor beta-2 microglobulin: implications for the mechanism underlying variations in antigen presentation. Molecular Immunology. 43: 1370-8. PMID 16229893 DOI: 10.1016/J.Molimm.2005.08.005 |
0.58 |
|
| 2005 |
Zhan C, Fedorov EV, Shi W, Ramagopal UA, Thirumuruhan R, Manjasetty BA, Almo SC, Fiser A, Chance MR, Fedorov AA. The ybeY protein from Escherichia coli is a metalloprotein. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 61: 959-63. PMID 16511207 DOI: 10.1107/S1744309105031131 |
0.563 |
|
| 2005 |
Bhatia S, Edidin M, Almo SC, Nathenson SG. Different cell surface oligomeric states of B7-1 and B7-2: implications for signaling. Proceedings of the National Academy of Sciences of the United States of America. 102: 15569-74. PMID 16221763 DOI: 10.1073/Pnas.0507257102 |
0.567 |
|
| 2005 |
Bonanno JB, Almo SC, Bresnick A, Chance MR, Fiser A, Swaminathan S, Jiang J, Studier FW, Shapiro L, Lima CD, Gaasterland TM, Sali A, Bain K, Feil I, Gao X, et al. New York-Structural GenomiX Research Consortium (NYSGXRC): a large scale center for the protein structure initiative. Journal of Structural and Functional Genomics. 6: 225-32. PMID 16211523 DOI: 10.1007/S10969-005-6827-0 |
0.546 |
|
| 2005 |
Sun JP, Wang WQ, Yang H, Liu S, Liang F, Fedorov AA, Almo SC, Zhang ZY. Structure and biochemical properties of PRL-1, a phosphatase implicated in cell growth, differentiation, and tumor invasion. Biochemistry. 44: 12009-21. PMID 16142898 DOI: 10.1021/Bi0509191 |
0.427 |
|
| 2005 |
Ramagopal UA, Dauter Z, Thirumuruhan R, Fedorov E, Almo SC. Radiation-induced site-specific damage of mercury derivatives: Phasing and implications Acta Crystallographica Section D: Biological Crystallography. 61: 1289-1298. PMID 16131763 DOI: 10.1107/S0907444905022316 |
0.309 |
|
| 2005 |
Tseng Y, Kole TP, Lee JS, Fedorov E, Almo SC, Schafer BW, Wirtz D. How actin crosslinking and bundling proteins cooperate to generate an enhanced cell mechanical response. Biochemical and Biophysical Research Communications. 334: 183-92. PMID 15992772 DOI: 10.1016/J.Bbrc.2005.05.205 |
0.331 |
|
| 2005 |
Quintero-Monzon O, Rodal AA, Strokopytov B, Almo SC, Goode BL. Structural and functional dissection of the Abp1 ADFH actin-binding domain reveals versatile in vivo adapter functions. Molecular Biology of the Cell. 16: 3128-39. PMID 15872087 DOI: 10.1091/Mbc.E05-01-0059 |
0.422 |
|
| 2005 |
Patskovska LN, Patskovsky YV, Almo SC, Hirsch RE. COHbC and COHbS crystallize in the R2 quaternary state at neutral pH in the presence of PEG 4000. Acta Crystallographica. Section D, Biological Crystallography. 61: 566-73. PMID 15858266 DOI: 10.1107/S0907444905004622 |
0.341 |
|
| 2005 |
Guan JQ, Takamoto K, Almo SC, Reisler E, Chance MR. Structure and dynamics of the actin filament. Biochemistry. 44: 3166-75. PMID 15736927 DOI: 10.1021/Bi048021J |
0.342 |
|
| 2005 |
Strokopytov BV, Fedorov A, Mahoney NM, Kessels M, Drubin DG, Almo SC. Phased translation function revisited: structure solution of the cofilin-homology domain from yeast actin-binding protein 1 using six-dimensional searches. Acta Crystallographica. Section D, Biological Crystallography. 61: 285-93. PMID 15735338 DOI: 10.1107/S0907444904033037 |
0.379 |
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| 2005 |
Ball T, Edstrom W, Mauch L, Schmitt J, Leistler B, Fiebig H, Sperr WR, Hauswirth AW, Valent P, Kraft D, Almo SC, Valenta R. Gain of structure and IgE epitopes by eukaryotic expression of the major Timothy grass pollen allergen, Phl p 1. The Febs Journal. 272: 217-27. PMID 15634345 DOI: 10.1111/J.1432-1033.2004.04403.X |
0.356 |
|
| 2004 |
Mattila PK, Quintero-Monzon O, Kugler J, Moseley JB, Almo SC, Lappalainen P, Goode BL. A high-affinity interaction with ADP-actin monomers underlies the mechanism and in vivo function of Srv2/cyclase-associated protein. Molecular Biology of the Cell. 15: 5158-71. PMID 15356265 DOI: 10.1091/Mbc.E04-06-0444 |
0.37 |
|
| 2004 |
Dodatko T, Fedorov AA, Grynberg M, Patskovsky Y, Rozwarski DA, Jaroszewski L, Aronoff-Spencer E, Kondraskina E, Irving T, Godzik A, Almo SC. Crystal structure of the actin binding domain of the cyclase-associated protein. Biochemistry. 43: 10628-41. PMID 15311924 DOI: 10.1021/Bi049071R |
0.429 |
|
| 2004 |
Klein MG, Shi W, Ramagopal U, Tseng Y, Wirtz D, Kovar DR, Staiger CJ, Almo SC. Structure of the actin crosslinking core of fimbrin. Structure (London, England : 1993). 12: 999-1013. PMID 15274920 DOI: 10.1016/J.Str.2004.04.010 |
0.401 |
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| 2004 |
Mohri K, Vorobiev S, Fedorov AA, Almo SC, Ono S. Identification of functional residues on Caenorhabditis elegans actin-interacting protein 1 (UNC-78) for disassembly of actin depolymerizing factor/cofilin-bound actin filaments Journal of Biological Chemistry. 279: 31697-31707. PMID 15150269 DOI: 10.1074/Jbc.M403351200 |
0.367 |
|
| 2004 |
Guan JQ, Almo SC, Chance MR. Synchrotron Radiolysis and Mass Spectrometry: A New Approach to Research on the Actin Cytoskeleton Accounts of Chemical Research. 37: 221-229. PMID 15096059 DOI: 10.1021/Ar0302235 |
0.356 |
|
| 2004 |
Zhang X, Schwartz JC, Guo X, Bhatia S, Cao E, Lorenz M, Cammer M, Chen L, Zhang ZY, Edidin MA, Nathenson SG, Almo SC. Structural and functional analysis of the costimulatory receptor programmed death-1. Immunity. 20: 337-47. PMID 15030777 DOI: 10.1016/S1074-7613(04)00051-2 |
0.71 |
|
| 2004 |
Shi W, Ting LM, Kicska GA, Lewandowicz A, Tyler PC, Evans GB, Furneaux RH, Kim K, Almo SC, Schramm VL. Plasmodium falciparum purine nucleoside phosphorylase: crystal structures, immucillin inhibitors, and dual catalytic function. The Journal of Biological Chemistry. 279: 18103-6. PMID 14982926 DOI: 10.1074/Jbc.C400068200 |
0.395 |
|
| 2004 |
Singh V, Shi W, Evans GB, Tyler PC, Furneaux RH, Almo SC, Schramm VL. Picomolar transition state analogue inhibitors of human 5'-methylthioadenosine phosphorylase and X-ray structure with MT-immucillin-A. Biochemistry. 43: 9-18. PMID 14705926 DOI: 10.1021/Bi0358420 |
0.348 |
|
| 2004 |
Zhang X, Schwartz JD, Guo X, Bhatia S, Cao E, Lorenz M, Cammer M, Chen L, Zhang Z, Edidin MA, Nathenson SG, Almo SC. Structural and Functional Analysis of the Costimulatory Receptor Programmed Death-1 Immunity. 20: 651. DOI: 10.1016/S1074-7613(04)00114-1 |
0.641 |
|
| 2003 |
Guan JQ, Almo SC, Reisler E, Chance MR. Structural reorganization of proteins revealed by radiolysis and mass spectrometry: G-actin solution structure is divalent cation dependent. Biochemistry. 42: 11992-2000. PMID 14556630 DOI: 10.1021/Bi034914K |
0.332 |
|
| 2003 |
Kiselar JG, Janmey PA, Almo SC, Chance MR. Structural analysis of gelsolin using synchrotron protein footprinting. Molecular & Cellular Proteomics : McP. 2: 1120-32. PMID 12966145 DOI: 10.1074/Mcp.M300068-Mcp200 |
0.343 |
|
| 2003 |
Sun JP, Wu L, Fedorov AA, Almo SC, Zhang ZY. Crystal structure of the Yersinia protein-tyrosine phosphatase YopH complexed with a specific small molecule inhibitor Journal of Biological Chemistry. 278: 33392-33399. PMID 12810712 DOI: 10.1074/Jbc.M304693200 |
0.42 |
|
| 2003 |
Lewandowicz A, Shi W, Evans GB, Tyler PC, Furneaux RH, Basso LA, Santos DS, Almo SC, Schramm VL. Over-the-barrier transition state analogues and crystal structure with Mycobacterium tuberculosis purine nucleoside phosphorylase. Biochemistry. 42: 6057-66. PMID 12755607 DOI: 10.1021/Bi0343830 |
0.304 |
|
| 2003 |
Vorobiev S, Strokopytov B, Drubin DG, Frieden C, Ono S, Condeelis J, Rubenstein PA, Almo SC. The structure of nonvertebrate actin: implications for the ATP hydrolytic mechanism. Proceedings of the National Academy of Sciences of the United States of America. 100: 5760-5. PMID 12732734 DOI: 10.1073/Pnas.0832273100 |
0.412 |
|
| 2003 |
Kiselar JG, Janmey PA, Almo SC, Chance MR. Visualizing the Ca2+-dependent activation of gelsolin by using synchrotron footprinting Proceedings of the National Academy of Sciences of the United States of America. 100: 3942-3947. PMID 12655044 DOI: 10.1073/Pnas.0736004100 |
0.309 |
|
| 2003 |
Zhang X, Schwartz JC, Almo SC, Nathenson SG. Crystal structure of the receptor-binding domain of human B7-2: insights into organization and signaling. Proceedings of the National Academy of Sciences of the United States of America. 100: 2586-91. PMID 12606712 DOI: 10.1073/Pnas.252771499 |
0.7 |
|
| 2003 |
Sun JP, Fedorov AA, Lee SY, Guo XL, Shen K, Lawrence DS, Almo SC, Zhang ZY. Crystal structure of PTP1B complexed with a potent and selective bidentate inhibitor. The Journal of Biological Chemistry. 278: 12406-14. PMID 12547827 DOI: 10.1074/Jbc.M212491200 |
0.414 |
|
| 2002 |
Kicska GA, Tyler PC, Evans GB, Furneaux RH, Shi W, Fedorov A, Lewandowicz A, Cahill SM, Almo SC, Schramm VL. Atomic dissection of the hydrogen bond network for transition-state analogue binding to purine nucleoside phosphorylase. Biochemistry. 41: 14489-98. PMID 12463747 DOI: 10.1021/Bi026636F |
0.347 |
|
| 2002 |
Dewan JC, Feeling-Taylor A, Puius YA, Patskovska L, Patskovsky Y, Nagel RL, Almo SC, Hirsch RE. Structure of mutant human carbonmonoxyhemoglobin C (betaE6K) at 2.0 A resolution. Acta Crystallographica. Section D, Biological Crystallography. 58: 2038-42. PMID 12454462 DOI: 10.1107/S0907444902016426 |
0.727 |
|
| 2002 |
Bobkov AA, Muhlrad A, Kokabi K, Vorobiev S, Almo SC, Reisler E. Structural effects of cofilin on longitudinal contacts in F-actin. Journal of Molecular Biology. 323: 739-50. PMID 12419261 DOI: 10.1016/S0022-2836(02)01008-2 |
0.302 |
|
| 2002 |
Shi W, Sarver AE, Wang CC, Tanaka KSE, Almo SC, Schramm VL. Closed site complexes of adenine phosphoribosyltransferase from Giardia lamblia reveal a mechanism of ribosyl migration Journal of Biological Chemistry. 277: 39981-39988. PMID 12171925 DOI: 10.1074/Jbc.M205596200 |
0.378 |
|
| 2002 |
Zhang X, Schwartz JC, Almo SC, Nathenson SG. Expression, refolding, purification, molecular characterization, crystallization, and preliminary X-ray analysis of the receptor binding domain of human B7-2. Protein Expression and Purification. 25: 105-13. PMID 12071705 DOI: 10.1006/Prep.2002.1616 |
0.711 |
|
| 2002 |
Guan JQ, Vorobiev S, Almo SC, Chance MR. Mapping the G-actin binding surface of cofilin using synchrotron protein footprinting Biochemistry. 41: 5765-5775. PMID 11980480 DOI: 10.1021/Bi0121104 |
0.377 |
|
| 2002 |
Schwartz JC, Zhang X, Nathenson SG, Almo SC. Structural mechanisms of costimulation. Nature Immunology. 3: 427-34. PMID 11976720 DOI: 10.1038/Ni0502-427 |
0.72 |
|
| 2002 |
Bubb MR, Govindasamy L, Yarmola EG, Vorobiev SM, Almo SC, Somasundaram T, Chapman MS, Agbandje-McKenna M, McKenna R. Polylysine induces an antiparallel actin dimer that nucleates filament assembly: crystal structure at 3.5-A resolution. The Journal of Biological Chemistry. 277: 20999-1006. PMID 11932258 DOI: 10.1074/Jbc.M201371200 |
0.37 |
|
| 2002 |
Chance MR, Bresnick AR, Burley SK, Jiang JS, Lima CD, Sali A, Almo SC, Bonanno JB, Buglino JA, Boulton S, Chen H, Eswar N, He G, Huang R, Ilyin V, et al. Structural genomics: a pipeline for providing structures for the biologist. Protein Science : a Publication of the Protein Society. 11: 723-38. PMID 11910018 DOI: 10.1110/Ps.4570102 |
0.535 |
|
| 2002 |
Ostrov DA, Roden MM, Shi W, Palmieri E, Christianson GJ, Mendoza L, Villaflor G, Tilley D, Shastri N, Grey H, Almo SC, Roopenian D, Nathenson SG. How H13 histocompatibility peptides differing by a single methyl group and lacking conventional MHC binding anchor motifs determine self-nonself discrimination. Journal of Immunology (Baltimore, Md. : 1950). 168: 283-9. PMID 11751972 DOI: 10.4049/Jimmunol.168.1.283 |
0.572 |
|
| 2001 |
Goldsmith SC, Guan JQ, Almo SC, Chance MR. Synchrotron protein footprinting: A technique to investigate protein-protein interactions Journal of Biomolecular Structure and Dynamics. 19: 405-418. PMID 11790140 DOI: 10.1080/07391102.2001.10506750 |
0.395 |
|
| 2001 |
Shi W, Tanaka KSE, Crother TR, Taylor MW, Almo SC, Schramm VL. Structural analysis of adenine phosphoribosyltransferase from Saccharomyces cerevisiae Biochemistry. 40: 10800-10809. PMID 11535055 DOI: 10.1021/Bi010465H |
0.404 |
|
| 2001 |
Shi W, Basso LA, Santos DS, Tyler PC, Furneaux RH, Blanchard JS, Almo SC, Schramm VL. Structures of purine nucleoside phosphorylase from Mycobacterium tuberculosis in complexes with immucillin-H and its pieces. Biochemistry. 40: 8204-15. PMID 11444966 DOI: 10.1021/Bi010585P |
0.394 |
|
| 2001 |
Zhang X, Schwartz JC, Nathenson SG, Almo SC. Crystallization and preliminary X-ray analysis of the complex between human CTLA-4 and B7-2. Acta Crystallographica. Section D, Biological Crystallography. 57: 898-9. PMID 11375523 DOI: 10.1107/S0907444901005777 |
0.711 |
|
| 2001 |
Schwartz JC, Zhang X, Fedorov AA, Nathenson SG, Almo SC. Structural basis for co-stimulation by the human CTLA-4/B7-2 complex. Nature. 410: 604-8. PMID 11279501 DOI: 10.1038/35069112 |
0.723 |
|
| 2001 |
Fedorov A, Shi W, Kicska G, Fedorov E, Tyler PC, Furneaux RH, Hanson JC, Gainsford GJ, Larese JZ, Schramm VL, Almo SC. Transition state structure of purine nucleoside phosphorylase and principles of atomic motion in enzymatic catalysis. Biochemistry. 40: 853-60. PMID 11170405 DOI: 10.1021/Bi002499F |
0.382 |
|
| 2000 |
Ostrov DA, Shi W, Schwartz JC, Almo SC, Nathenson SG. Structure of murine CTLA-4 and its role in modulating T cell responsiveness. Science (New York, N.Y.). 290: 816-9. PMID 11052947 DOI: 10.1126/Science.290.5492.816 |
0.621 |
|
| 2000 |
Melián A, Watts GF, Shamshiev A, De Libero G, Clatworthy A, Vincent M, Brenner MB, Behar S, Niazi K, Modlin RL, Almo S, Ostrov D, Nathenson SG, Porcelli SA. Molecular recognition of human CD1b antigen complexes: evidence for a common pattern of interaction with alpha beta TCRs. Journal of Immunology (Baltimore, Md. : 1950). 165: 4494-504. PMID 11035089 DOI: 10.4049/Jimmunol.165.8.4494 |
0.535 |
|
| 2000 |
Wolven AK, Belmont LD, Mahoney NM, Almo SC, Drubin DG. In vivo importance of actin nucleotide exchange catalyzed by profilin. The Journal of Cell Biology. 150: 895-904. PMID 10953013 DOI: 10.1083/Jcb.150.4.895 |
0.321 |
|
| 2000 |
Sarmiento M, Puius YA, Vetter SW, Keng YF, Wu L, Zhao Y, Lawrence DS, Almo SC, Zhang ZY. Structural basis of plasticity in protein tyrosine phosphatase 1B substrate recognition. Biochemistry. 39: 8171-9. PMID 10889023 DOI: 10.1021/Bi000319W |
0.736 |
|
| 2000 |
Shi W, Munagala NR, Wang CC, Li CM, Tyler PC, Furneaux RH, Grubmeyer C, Schramm VL, Almo SC. Crystal structures of Giardia lamblia guanine phosphoribosyltransferase at 1.75 A(,). Biochemistry. 39: 6781-90. PMID 10841757 DOI: 10.1021/Bi000128T |
0.391 |
|
| 2000 |
Puius YA, Fedorov EV, Eichinger L, Schleicher M, Almo SC. Mapping the functional surface of domain 2 in the gelsolin superfamily. Biochemistry. 39: 5322-31. PMID 10820002 DOI: 10.1021/Bi992364D |
0.731 |
|
| 1999 |
Burley SK, Almo SC, Bonanno JB, Capel M, Chance MR, Gaasterland T, Lin D, Sali A, Studier FW, Swaminathan S. Structural genomics: beyond the human genome project. Nature Genetics. 23: 151-7. PMID 10508510 DOI: 10.1038/13783 |
0.51 |
|
| 1999 |
Levin S, Almo SC, Satir BH. Functional diversity of the phosphoglucomutase superfamily: structural implications. Protein Engineering. 12: 737-46. PMID 10506283 DOI: 10.1093/Protein/12.9.737 |
0.375 |
|
| 1999 |
Shi W, Li CM, Tyler PC, Furneaux RH, Cahill SM, Girvin ME, Grubmeyer C, Schramm VL, Almo SC. The 2.0 A structure of malarial purine phosphoribosyltransferase in complex with a transition-state analogue inhibitor. Biochemistry. 38: 9872-80. PMID 10433693 DOI: 10.1021/Bi990664P |
0.36 |
|
| 1999 |
Shi W, Schramm VL, Almo SC. Nucleoside hydrolase from Leishmania major. Cloning, expression, catalytic properties, transition state inhibitors, and the 2.5-Å crystal structure Journal of Biological Chemistry. 274: 21114-21120. PMID 10409664 DOI: 10.1074/Jbc.274.30.21114 |
0.359 |
|
| 1999 |
Mahoney NM, Rozwarski DA, Fedorov E, Fedorov AA, Almo SC. Profilin binds proline-rich ligands in two distinct amide backbone orientations Nature Structural Biology. 6: 666-671. PMID 10404225 DOI: 10.1038/10722 |
0.41 |
|
| 1999 |
Fedorov AA, Fedorov E, Gertler F, Almo SC. Structure of EVH1, a novel proline-rich ligand-binding module involved in cytoskeletal dynamics and neural function Nature Structural Biology. 6: 661-665. PMID 10404224 DOI: 10.1038/10717 |
0.416 |
|
| 1999 |
Shi W, Li CM, Tyler PC, Furneaux RH, Grubmeyer C, Schramm VL, Almo SC. The 2.0 A structure of human hypoxanthine-guanine phosphoribosyltransferase in complex with a transition-state analog inhibitor. Nature Structural Biology. 6: 588-93. PMID 10360366 DOI: 10.1038/9376 |
0.315 |
|
| 1998 |
Patskovska LN, Fedorov AA, Patskovsky YV, Almo SC, Listowsky T. Expression, crystallization and preliminary X-ray analysis of ligand-free human glutathione S-transferase M2-2 Acta Crystallographica Section D: Biological Crystallography. 54: 458-460. PMID 9761928 DOI: 10.1107/S0907444997011190 |
0.366 |
|
| 1998 |
Mahoney NM, Almo SC. Crystallization and preliminary X-ray analysis of human platelet profilin complexed with an oligo proline peptide Acta Crystallographica Section D: Biological Crystallography. 54: 108-110. PMID 9761827 DOI: 10.1107/S0907444997008007 |
0.371 |
|
| 1998 |
Eads JC, Mahoney NM, Vorobiev S, Bresnick AR, Wen KK, Rubenstein PA, Haarer BK, Almo SC. Structure determination and characterization of Saccharomyces cerevisiae profilin. Biochemistry. 37: 11171-81. PMID 9698363 DOI: 10.1021/Bi9720033 |
0.39 |
|
| 1998 |
Mitra J, Tang X, Almo SC, Shields D. Temperature-induced conformational changes in prosomatostatin-II: implications for processing. The Biochemical Journal. 334: 275-82. PMID 9693130 DOI: 10.1042/Bj3340275 |
0.336 |
|
| 1998 |
Puius YA, Zou M, Ho NT, Ho C, Almo SC. Novel water-mediated hydrogen bonds as the structural basis for the low oxygen affinity of the blood substitute candidate rHb(alpha 96Val-->Trp). Biochemistry. 37: 9258-65. PMID 9649306 DOI: 10.1021/Bi9727287 |
0.712 |
|
| 1998 |
Mao C, Cook WJ, Zhou M, Federov AA, Almo SC, Ealick SE. Calf spleen purine nucleoside phosphorylase complexed with substrates and substrate analogues Biochemistry. 37: 7135-7146. PMID 9585525 DOI: 10.1021/Bi9723919 |
0.425 |
|
| 1998 |
Degano M, Almo SC, Sacchettini JC, Schramm VL. Trypanosomal nucleoside hydrolase. A novel mechanism from the structure with a transition-state inhibitor Biochemistry. 37: 6277-6285. PMID 9572842 DOI: 10.1021/Bi973012E |
0.356 |
|
| 1998 |
Puius YA, Mahoney NM, Almo SC. The modular structure of actin-regulatory proteins. Current Opinion in Cell Biology. 10: 23-34. PMID 9484592 DOI: 10.1016/S0955-0674(98)80083-5 |
0.725 |
|
| 1997 |
Puius YA, Zhao Y, Sullivan M, Lawrence DS, Almo SC, Zhang ZY. Identification of a second aryl phosphate-binding site in protein-tyrosine phosphatase 1B: a paradigm for inhibitor design. Proceedings of the National Academy of Sciences of the United States of America. 94: 13420-5. PMID 9391040 DOI: 10.1073/Pnas.94.25.13420 |
0.739 |
|
| 1997 |
Mahoney NM, Janmey PA, Almo SC. Structure of the profilin-poly-L-proline complex involved in morphogenesis and cytoskeletal regulation Nature Structural Biology. 4: 953-960. PMID 9360613 DOI: 10.1038/Nsb1197-953 |
0.389 |
|
| 1997 |
Lappalainen P, Fedorov EV, Fedorov AA, Almo SC, Drubin DG. Essential functions and actin-binding surfaces of yeast cofilin revealed by systematic mutagenesis. The Embo Journal. 16: 5520-30. PMID 9312011 DOI: 10.1093/Emboj/16.18.5520 |
0.367 |
|
| 1997 |
Goldsmith SC, Pokala N, Shen W, Fedorov AA, Matsudaira P, Almo SC. The structure of an actin-crosslinking domain from human fimbrin Nature Structural Biology. 4: 708-712. PMID 9302997 DOI: 10.1038/Nsb0997-708 |
0.359 |
|
| 1997 |
Goldsmith SC, Pokala N, Matsudaira P, Almo SC. Crystallization and preliminary crystallographic analysis of the N- terminal actin binding domain of human fimbrin Proteins: Structure, Function and Genetics. 28: 452-453. PMID 9223189 DOI: 10.1002/(Sici)1097-0134(199707)28:3<452::Aid-Prot13>3.0.Co;2-G |
0.374 |
|
| 1997 |
Fedorov AA, Lappalainen P, Fedorov EV, Drubin DG, Almo SC. Structure determination of yeast cofilin. Nature Structural Biology. 4: 366-9. PMID 9145106 DOI: 10.1107/S0108767396092586 |
0.368 |
|
| 1997 |
Fedorov AA, Ball T, Valenta R, Almo SC. X-ray crystal structures of birch pollen profilin and Phl p 2. International Archives of Allergy and Immunology. 113: 109-13. PMID 9130496 DOI: 10.1159/000237520 |
0.314 |
|
| 1997 |
Fedorov AA, Ball T, Mahoney NM, Valenta R, Almo SC. The molecular basis for allergen cross-reactivity: crystal structure and IgE-epitope mapping of birch pollen profilin. Structure (London, England : 1993). 5: 33-45. PMID 9016715 DOI: 10.1016/S0969-2126(97)00164-0 |
0.381 |
|
| 1997 |
Wiedemann P, Giehl K, Almo SC, Fedorov AA, Girvin M, Steinberger P, Rüdiger M, Ortner M, Sippl M, Dolecek C, Kraft D, Jockusch B, Valenta R. Molecular and structural analysis of a continuous birch profilin epitope defined by a monoclonal antibody. The Journal of Biological Chemistry. 271: 29915-21. PMID 8939935 DOI: 10.1074/Jbc.271.47.29915 |
0.339 |
|
| 1997 |
Zhang ZY, Puius YA, Zhao Y, Sullivan M, Lawrence DS, Almo SC. Identification of a novel aryl phosphate-binding site in PTP1B: Implications for inhibitor design Faseb Journal. 11: A834. |
0.682 |
|
| 1997 |
Zhan ZY, Puius YA, Zhao Y, Sullivan M, Lawrence DS, Almo SC. Identincation of a novel aryl phosphate-binding site in ptp1b: implications for inhibitor design Faseb Journal. 11: A1185. |
0.68 |
|
| 1996 |
Fedorov AA, Joseph-McCarthy D, Fedorov E, Sirakova D, Graf I, Almo SC. Ionic interactions in crystalline bovine pancreatic ribonuclease A Biochemistry. 35: 15962-15979. PMID 8973167 DOI: 10.1021/Bi961533G |
0.412 |
|
| 1996 |
Joseph-McCarthy D, Fedorov AA, Almo SC. Comparison of experimental and computational functional group mapping of an RNase A structure: Implications for computer-aided drug design Protein Engineering. 9: 773-780. PMID 8888143 DOI: 10.1093/Protein/9.9.773 |
0.345 |
|
| 1994 |
Fedorov AA, Magnus KA, Graupe MH, Lattman EE, Pollard TD, Almo SC. X-ray structures of isoforms of the actin-binding protein profilin that differ in their affinity for phosphatidylinositol phosphates Proceedings of the National Academy of Sciences of the United States of America. 91: 8636-8640. PMID 8078936 DOI: 10.1073/Pnas.91.18.8636 |
0.377 |
|
| 1994 |
Almo SC, Smith DL, Danishefsky AT, Ringe D. The structural basis for the altered substrate specificity of the r292d active site mutant of aspartate aminotransferase from E.coli Protein Engineering, Design and Selection. 7: 405-412. PMID 7909946 DOI: 10.1093/Protein/7.3.405 |
0.361 |
|
| 1994 |
Pollard TD, Almo S, Quirk S, Vinson V, Lattman EE. Structure of actin binding proteins: insights about function at atomic resolution. Annual Review of Cell Biology. 10: 207-49. PMID 7888177 DOI: 10.1146/Annurev.Cb.10.110194.001231 |
0.388 |
|
| 1992 |
Howell PL, Almo SC, Parsons MR, Hajdu J, Petsko GA. Structure determination of turkey egg-white lysozyme using Laue diffraction data. Acta Crystallographica. Section B, Structural Science. 48: 200-7. PMID 1515108 DOI: 10.1107/S0108768191012466 |
0.694 |
|
| 1990 |
Schlichting I, Almo SC, Rapp G, Wilson K, Petratos K, Lentfer A, Wittinghofer A, Kabsch W, Pai EF, Petsko GA, Goody RS. Time-resolved X-ray crystallographic study of the conformational change in Ha-Ras p21 protein on GTP hydrolysis Nature. 345: 309-315. PMID 2111463 DOI: 10.1038/345309A0 |
0.648 |
|
| 1989 |
Mondragón A, Subbiah S, Almo SC, Drottar M, Harrison SC. Structure of the amino-terminal domain of phage 434 repressor at 2.0 A resolution. Journal of Molecular Biology. 205: 189-200. PMID 2926803 DOI: 10.1016/0022-2836(89)90375-6 |
0.373 |
|
| 1989 |
Smith DL, Almo SC, Toney MD, Ringe D. 2.8-A-resolution crystal structure of an active-site mutant of aspartate aminotransferase from Escherichia coli. Biochemistry. 28: 8161-7. PMID 2513875 DOI: 10.1021/Bi00446A030 |
0.361 |
|
| 1988 |
Farber GK, Machin P, Almo SC, Petsko GA, Hajdu J. X-ray Laue diffraction from crystals of xylose isomerase Proceedings of the National Academy of Sciences of the United States of America. 85: 112-115. PMID 3422408 DOI: 10.1073/Pnas.85.1.112 |
0.485 |
|
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