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Ruedi Aebersold - Publications

Affiliations: 
Systems biology Eidgenössische Technische Hochschule Zürich, Zürich, ZH, Switzerland 
Area:
Proteomics
Website:
http://en.wikipedia.org/wiki/Ruedi_Aebersold

500 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Zhu Y, Aebersold R, Mann M, Guo T. SnapShot: Clinical proteomics. Cell. 184: 4840-4840.e1. PMID 34478659 DOI: 10.1016/j.cell.2021.08.015  1
2021 Čuklina J, Lee CH, Williams EG, Sajic T, Collins BC, Rodríguez Martínez M, Sharma VS, Wendt F, Goetze S, Keele GR, Wollscheid B, Aebersold R, Pedrioli PGA. Diagnostics and correction of batch effects in large-scale proteomic studies: a tutorial. Molecular Systems Biology. 17: e10240. PMID 34432947 DOI: 10.15252/msb.202110240  1
2021 Haffner MC, Bhamidipati A, Tsai HK, Esopi DM, Vaghasia AM, Low JY, Patel RA, Guner G, Pham MT, Castagna N, Hicks J, Wyhs N, Aebersold R, De Marzo AM, Nelson WG, et al. Phenotypic characterization of two novel cell line models of castration-resistant prostate cancer. The Prostate. PMID 34402095 DOI: 10.1002/pros.24210  1
2021 Gerhardy S, Oborská-Oplová M, Gillet L, Börner R, van Nues R, Leitner A, Michel E, Petkowski JJ, Granneman S, Sigel RKO, Aebersold R, Panse VG. Puf6 primes 60S pre-ribosome nuclear export at low temperature. Nature Communications. 12: 4696. PMID 34349113 DOI: 10.1038/s41467-021-24964-2  1
2021 Cadow J, Manica M, Mathis R, Guo T, Aebersold R, Rodríguez Martínez M. On the feasibility of deep learning applications using raw mass spectrometry data. Bioinformatics (Oxford, England). 37: i245-i253. PMID 34252933 DOI: 10.1093/bioinformatics/btab311  1
2021 Trauner A, Banaei-Esfahani A, Gygli SM, Warmer P, Feldmann J, Zampieri M, Borrell S, Collins BC, Beisel C, Aebersold R, Gagneux S. Expression dysregulation as a mediator of fitness costs in antibiotic resistance. Antimicrobial Agents and Chemotherapy. AAC0050421. PMID 34228548 DOI: 10.1128/AAC.00504-21  1
2021 Meier-Abt F, Lu J, Cannizzaro E, Pohly MF, Kummer S, Pfammatter S, Kunz L, Collins BC, Nadeu F, Lee KS, Xue P, Gwerder M, Roiss M, Hüllein J, Scheinost S, ... ... Aebersold R, et al. The Protein Landscape of Chronic Lymphocytic Leukemia (CLL). Blood. PMID 34189564 DOI: 10.1182/blood.2020009741  1
2021 Bludau I, Frank M, Dörig C, Cai Y, Heusel M, Rosenberger G, Picotti P, Collins BC, Röst H, Aebersold R. Systematic detection of functional proteoform groups from bottom-up proteomic datasets. Nature Communications. 12: 3810. PMID 34155216 DOI: 10.1038/s41467-021-24030-x  1
2021 Mori M, Zhang Z, Banaei-Esfahani A, Lalanne JB, Okano H, Collins BC, Schmidt A, Schubert OT, Lee DS, Li GW, Aebersold R, Hwa T, Ludwig C. From coarse to fine: the absolute Escherichia coli proteome under diverse growth conditions. Molecular Systems Biology. 17: e9536. PMID 34032011 DOI: 10.15252/msb.20209536  1
2021 Pangou E, Bielska O, Guerber L, Schmucker S, Agote-Arán A, Ye T, Liao Y, Puig-Gamez M, Grandgirard E, Kleiss C, Liu Y, Compe E, Zhang Z, Aebersold R, Ricci R, et al. A PKD-MFF signaling axis couples mitochondrial fission to mitotic progression. Cell Reports. 35: 109129. PMID 34010649 DOI: 10.1016/j.celrep.2021.109129  1
2021 Fossati A, Li C, Uliana F, Wendt F, Frommelt F, Sykacek P, Heusel M, Hallal M, Bludau I, Capraz T, Xue P, Song J, Wollscheid B, Purcell AW, Gstaiger M, ... Aebersold R, et al. PCprophet: a framework for protein complex prediction and differential analysis using proteomic data. Nature Methods. PMID 33859439 DOI: 10.1038/s41592-021-01107-5  1
2021 Knowlton JJ, Gestaut D, Ma B, Taylor G, Seven AB, Leitner A, Wilson GJ, Shanker S, Yates NA, Prasad BVV, Aebersold R, Chiu W, Frydman J, Dermody TS. Structural and functional dissection of reovirus capsid folding and assembly by the prefoldin-TRiC/CCT chaperone network. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33836586 DOI: 10.1073/pnas.2018127118  1
2021 Uliana F, Vizovišek M, Acquasaliente L, Ciuffa R, Fossati A, Frommelt F, Goetze S, Wollscheid B, Gstaiger M, De Filippis V, Auf dem Keller U, Aebersold R. Mapping specificity, cleavage entropy, allosteric changes and substrates of blood proteases in a high-throughput screen. Nature Communications. 12: 1693. PMID 33727531 DOI: 10.1038/s41467-021-21754-8  1
2021 Fossati A, Frommelt F, Uliana F, Martelli C, Vizovisek M, Gillet L, Collins B, Gstaiger M, Aebersold R. System-Wide Profiling of Protein Complexes Via Size Exclusion Chromatography-Mass Spectrometry (SEC-MS). Methods in Molecular Biology (Clifton, N.J.). 2259: 269-294. PMID 33687722 DOI: 10.1007/978-1-0716-1178-4_18  1
2021 Miller CE, Ward J, Yoganantham DC, Bond A. Evaluation of internet derived patient information for Acute Pancreatitis. The Ulster Medical Journal. 90: 7-9. PMID 33642626  0.01
2021 Zhang H, Liu P, Guo T, Zhao H, Bensaddek D, Aebersold R, Xiong L. Author Correction: Arabidopsis proteome and the mass spectral assay library. Scientific Data. 8: 69. PMID 33623022 DOI: 10.1038/s41597-021-00852-8  1
2021 Meier-Abt F, Wolski WE, Tan G, Kummer S, Amon S, Manz MG, Aebersold R, Theocharides APA. Reduced CXCL4/PF4 expression as a driver of increased human hematopoietic stem and progenitor cell proliferation in polycythemia vera. Blood Cancer Journal. 11: 31. PMID 33574218 DOI: 10.1038/s41408-021-00423-5  1
2021 Kasinath V, Beck C, Sauer P, Poepsel S, Kosmatka J, Faini M, Toso D, Aebersold R, Nogales E. JARID2 and AEBP2 regulate PRC2 in the presence of H2AK119ub1 and other histone modifications. Science (New York, N.Y.). 371. PMID 33479123 DOI: 10.1126/science.abc3393  1
2020 Rosenberger G, Heusel M, Bludau I, Collins BC, Martelli C, Williams EG, Xue P, Liu Y, Aebersold R, Califano A. SECAT: Quantifying Protein Complex Dynamics across Cell States by Network-Centric Analysis of SEC-SWATH-MS Profiles. Cell Systems. 11: 589-607.e8. PMID 33333029 DOI: 10.1016/j.cels.2020.11.006  1
2020 Charmpi K, Guo T, Zhong Q, Wagner U, Sun R, Toussaint NC, Fritz CE, Yuan C, Chen H, Rupp NJ, Christiansen A, Rutishauser D, Rüschoff JH, Fankhauser C, Saba K, ... ... Aebersold R, et al. Convergent network effects along the axis of gene expression during prostate cancer progression. Genome Biology. 21: 302. PMID 33317623 DOI: 10.1186/s13059-020-02188-9  1
2020 Meier F, Brunner AD, Frank M, Ha A, Bludau I, Voytik E, Kaspar-Schoenefeld S, Lubeck M, Raether O, Bache N, Aebersold R, Collins BC, Röst HL, Mann M. diaPASEF: parallel accumulation-serial fragmentation combined with data-independent acquisition. Nature Methods. 17: 1229-1236. PMID 33257825 DOI: 10.1038/s41592-020-00998-0  1
2020 Schlam-Babayov S, Bensimon A, Harel M, Geiger T, Aebersold R, Ziv Y, Shiloh Y. Phosphoproteomics reveals novel modes of function and inter-relationships among PIKKs in response to genotoxic stress. The Embo Journal. e104400. PMID 33215756 DOI: 10.15252/embj.2020104400  1
2020 Sturm T, Sautter B, Wörner TP, Stevanović S, Rammensee HG, Planz O, Heck AJR, Aebersold R. Mild Acid Elution and MHC Immunoaffinity Chromatography Reveal Similar Albeit Not Identical Profiles of the HLA Class I Immunopeptidome. Journal of Proteome Research. PMID 33141586 DOI: 10.1021/acs.jproteome.0c00386  1
2020 Adhikari S, Nice EC, Deutsch EW, Lane L, Omenn GS, Pennington SR, Paik YK, Overall CM, Corrales FJ, Cristea IM, Van Eyk JE, Uhlén M, Lindskog C, Chan DW, Bairoch A, ... ... Aebersold R, et al. A high-stringency blueprint of the human proteome. Nature Communications. 11: 5301. PMID 33067450 DOI: 10.1038/s41467-020-19045-9  1
2020 Omenn GS, Lane L, Overall CM, Cristea IM, Corrales FJ, Lindskog C, Paik YK, Van Eyk JE, Liu S, Pennington S, Snyder MP, Baker MS, Bandeira N, Aebersold R, Moritz RL, et al. Research on The Human Proteome Reaches a Major Milestone: >90% of Predicted Human Proteins Now Credibly Detected, according to the HUPO Human Proteome Project. Journal of Proteome Research. PMID 32931287 DOI: 10.1021/Acs.Jproteome.0C00485  1
2020 Zhu T, Zhu Y, Xuan Y, Gao H, Cai X, Piersma SR, Pham TV, Schelfhorst T, Haas RRGD, Bijnsdorp IV, Sun R, Yue L, Ruan G, Zhang Q, Hu M, ... ... Aebersold R, et al. DPHL: A DIA Pan-human Protein Mass Spectrometry Library for Robust Biomarker Discovery. Genomics, Proteomics & Bioinformatics. PMID 32795611 DOI: 10.1016/J.Gpb.2019.11.008  1
2020 Poulos RC, Hains PG, Shah R, Lucas N, Xavier D, Manda SS, Anees A, Koh JMS, Mahboob S, Wittman M, Williams SG, Sykes EK, Hecker M, Dausmann M, Wouters MA, ... ... Aebersold R, et al. Strategies to enable large-scale proteomics for reproducible research. Nature Communications. 11: 3793. PMID 32732981 DOI: 10.1038/S41467-020-17641-3  1
2020 Park KE, Allam O, Kim S, Prsic A. Accuracy of Online Pictorial Resources for Common Hand Surgery Procedures. Hand (New York, N.Y.). 1558944720937360. PMID 32713204 DOI: 10.1177/1558944720937360  0.04
2020 Buljan M, Ciuffa R, van Drogen A, Vichalkovski A, Mehnert M, Rosenberger G, Lee S, Varjosalo M, Pernas LE, Spegg V, Snijder B, Aebersold R, Gstaiger M. Kinase Interaction Network Expands Functional and Disease Roles of Human Kinases. Molecular Cell. PMID 32707033 DOI: 10.1016/J.Molcel.2020.07.001  1
2020 Poghosyan E, Iacovache I, Faltova L, Leitner A, Yang P, Diener DR, Aebersold R, Zuber B, Ishikawa T. The structure and symmetry of the radial spoke protein complex in flagella. Journal of Cell Science. 133. PMID 32694165 DOI: 10.1242/Jcs.245233  1
2020 Bludau I, Heusel M, Frank M, Rosenberger G, Hafen R, Banaei-Esfahani A, van Drogen A, Collins BC, Gstaiger M, Aebersold R. Complex-centric proteome profiling by SEC-SWATH-MS for the parallel detection of hundreds of protein complexes. Nature Protocols. PMID 32690956 DOI: 10.1038/S41596-020-0332-6  1
2020 Mehnert M, Ciuffa R, Frommelt F, Uliana F, van Drogen A, Ruminski K, Gstaiger M, Aebersold R. Multi-layered proteomic analyses decode compositional and functional effects of cancer mutations on kinase complexes. Nature Communications. 11: 3563. PMID 32678104 DOI: 10.1038/S41467-020-17387-Y  1
2020 Jung T, Shin B, Tamo G, Kim H, Vijayvargia R, Leitner A, Marcaida MJ, Astorga-Wells J, Jung R, Aebersold R, Peraro MD, Hebert H, Seong IS, Song JJ. The Polyglutamine Expansion at the N-Terminal of Huntingtin Protein Modulates the Dynamic Configuration and Phosphorylation of the C-Terminal HEAT Domain. Structure (London, England : 1993). PMID 32668197 DOI: 10.1016/J.Str.2020.06.008  1
2020 Thomas SN, Friedrich B, Schnaubelt M, Chan DW, Zhang H, Aebersold R. Orthogonal Proteomic Platforms and Their Implications for the Stable Classification of High-Grade Serous Ovarian Cancer Subtypes. Iscience. 23: 101079. PMID 32534439 DOI: 10.1016/J.Isci.2020.101079  1
2020 Villaseñor R, Pfaendler R, Ambrosi C, Butz S, Giuliani S, Bryan E, Sheahan TW, Gable AL, Schmolka N, Manzo M, Wirz J, Feller C, von Mering C, Aebersold R, Voigt P, et al. Publisher Correction: ChromID identifies the protein interactome at chromatin marks. Nature Biotechnology. 38: 757. PMID 32518402 DOI: 10.1038/S41587-020-0484-5  1
2020 Koopman-Verhoeff ME, Mulder RH, Saletin JM, Reiss I, van der Horst GTJ, Felix JF, Carskadon MA, Tiemeier H, Cecil CAM. Genome-wide DNA methylation patterns associated with sleep and mental health in children: a population-based study. Journal of Child Psychology and Psychiatry, and Allied Disciplines. PMID 32361995 DOI: 10.1111/jcpp.13252  0.01
2020 Janacova L, Faktor J, Capkova L, Paralova V, Pospisilova A, Podhorec J, Ebhardt HA, Hrstka R, Nenutil R, Aebersold R, Bouchal P. SWATH-MS Analysis of FFPE Tissues Identifies Stathmin as a Potential Marker of Endometrial Cancer in Patients Exposed to Tamoxifen. Journal of Proteome Research. PMID 32343582 DOI: 10.1021/Acs.Jproteome.0C00064  1
2020 Bensimon A, Koch JP, Francica P, Roth SM, Riedo R, Glück AA, Orlando E, Blaukat A, Aebersold DM, Zimmer Y, Aebersold R, Medová M. Deciphering MET-dependent modulation of global cellular responses to DNA damage by quantitative phosphoproteomics. Molecular Oncology. PMID 32336009 DOI: 10.1002/1878-0261.12696  1
2020 Frederic F, Soraya B, Anne-Sophie A, Aurelie A, David A. Gender-related differences in the facial aging of Caucasian French subjects and their relations with perceived ages and tiredness. Journal of Cosmetic Dermatology. PMID 32315489 DOI: 10.1111/jocd.13446  0.01
2020 Bludau I, Aebersold R. Author Correction: Proteomic and interactomic insights into the molecular basis of cell functional diversity. Nature Reviews. Molecular Cell Biology. PMID 32303723 DOI: 10.1038/S41580-020-0249-5  1
2020 Liu YJ, McIntyre RL, Janssens GE, Williams EG, Lan J, van Weeghel M, Schomakers B, van der Veen H, van der Wel NN, Yao P, Mair WB, Aebersold R, MacInnes AW, Houtkooper RH. Mitochondrial translation and dynamics synergistically extend lifespan in C. elegans through HLH-30. The Journal of Cell Biology. 219. PMID 32259199 DOI: 10.1083/Jcb.201907067  1
2020 Bludau I, Aebersold R. Proteomic and interactomic insights into the molecular basis of cell functional diversity. Nature Reviews. Molecular Cell Biology. PMID 32235894 DOI: 10.1038/S41580-020-0231-2  1
2020 Schroeder T, Elkheir S, Farrokhyar F, Allard-Coutu A, Kahnamoui K. Does exposure to anatomy education in medical school affect surgical residency applications? An analysis of Canadian residency match data Canadian Journal of Surgery. Journal Canadien De Chirurgie. 63: E129-E134. PMID 32195617 DOI: 10.1503/cjs.019218  0.01
2020 Shao W, Caron E, Pedrioli P, Aebersold R. The SysteMHC Atlas: a Computational Pipeline, a Website, and a Data Repository for Immunopeptidomic Analyses. Methods in Molecular Biology (Clifton, N.J.). 2120: 173-181. PMID 32124319 DOI: 10.1007/978-1-0716-0327-7_12  1
2020 Villaseñor R, Pfaendler R, Ambrosi C, Butz S, Giuliani S, Bryan E, Sheahan TW, Gable AL, Schmolka N, Manzo M, Wirz J, Feller C, von Mering C, Aebersold R, Voigt P, et al. ChromID identifies the protein interactome at chromatin marks. Nature Biotechnology. PMID 32123383 DOI: 10.1038/S41587-020-0434-2  1
2020 Plank M, Perepelkina M, Müller M, Vaga S, Zou X, Bourgoint C, Berti M, Saarbach J, Haesendonckx S, Winssinger N, Aebersold R, Loewith R. Chemical genetics of AGC-kinases reveals shared targets of Ypk1, Protein Kinase A and Sch9. Molecular & Cellular Proteomics : McP. PMID 32102971 DOI: 10.1074/Mcp.Ra120.001955  1
2020 Röst HL, Rosenberger G, Navarro P, Gillet L, Miladinović SM, Schubert OT, Wolski W, Collins BC, Malmström J, Malmström L, Aebersold R. Publisher Correction: OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data. Nature Biotechnology. PMID 32094660 DOI: 10.1038/S41587-020-0457-8  1
2020 Molenaars M, Janssens GE, Williams EG, Jongejan A, Lan J, Rabot S, Joly F, Moerland PD, Schomakers BV, Lezzerini M, Liu YJ, McCormick MA, Kennedy BK, van Weeghel M, van Kampen AHC, ... Aebersold R, et al. A Conserved Mito-Cytosolic Translational Balance Links Two Longevity Pathways. Cell Metabolism. PMID 32084377 DOI: 10.1016/J.Cmet.2020.01.011  1
2020 Hausmann A, Russo G, Grossmann J, Zünd M, Schwank G, Aebersold R, Liu Y, Sellin ME, Hardt WD. Germ-Free and Microbiota-Associated Mice yield Small Intestinal Epithelial Organoids with Equivalent and Robust Transcriptome/Proteome Expression Phenotypes. Cellular Microbiology. e13191. PMID 32068945 DOI: 10.1111/Cmi.13191  1
2020 Sun R, Hunter C, Chen C, Ge W, Morrice N, Liang S, Zhu T, Yuan C, Ruan G, Zhang Q, Cai X, Yu X, Chen L, Dai S, Luan Z, ... Aebersold R, et al. Accelerated Protein Biomarker Discovery from FFPE Tissue Samples Using Single-Shot, Short Gradient Microflow SWATH MS. Journal of Proteome Research. PMID 32053377 DOI: 10.1021/Acs.Jproteome.9B00671  1
2020 Heusel M, Frank M, Köhler M, Amon S, Frommelt F, Rosenberger G, Bludau I, Aulakh S, Linder MI, Liu Y, Collins BC, Gstaiger M, Kutay U, Aebersold R. A Global Screen for Assembly State Changes of the Mitotic Proteome by SEC-SWATH-MS. Cell Systems. PMID 32027860 DOI: 10.1016/J.Cels.2020.01.001  1
2020 Klingauf-Nerurkar P, Gillet LC, Portugal-Calisto D, Oplova M, Jäger M, Schubert OT, Pisano A, Peña C, Rao S, Altvater M, Chang Y, Aebersold R, Panse VG. The GTPase Nog1 co-ordinates assembly, maturation and quality control of distant ribosomal functional centers. Elife. 9. PMID 31909713 DOI: 10.7554/Elife.52474  1
2020 Čuklina J, Pedrioli PGA, Aebersold R. Review of Batch Effects Prevention, Diagnostics, and Correction Approaches. Methods in Molecular Biology (Clifton, N.J.). 2051: 373-387. PMID 31552638 DOI: 10.1007/978-1-4939-9744-2_16  1
2020 Koch JP, Bensimon A, Roth SM, Medo M, Francica P, Orlando E, Riedo R, Gavini J, Quintin A, Glück AA, Stroka DM, Blaukat A, Aebersold DM, Zimmer Y, Aebersold R, et al. Abstract A52: Deciphering MET-dependent modulation of global cellular responses to DNA damage by quantitative phosphoproteomics reveals Ser1016 as a novel MET phosphosite that regulates cellular response to irradiation Cancer Research. 80. DOI: 10.1158/1538-7445.Camodels2020-A52  1
2019 Feller C, Felix M, Weiss T, Herold-Mende C, Zhang F, Kockmann T, Sahm F, Aebersold R, von Deimling A, Reuss DE. Histone epiproteomic profiling distinguishes oligodendroglioma, IDH-mutant and 1p/19q co-deleted from IDH-mutant astrocytoma and reveals less tri-methylation of H3K27 in oligodendrogliomas. Acta Neuropathologica. PMID 31773240 DOI: 10.1007/S00401-019-02096-8  1
2019 Zhang H, Liu P, Guo T, Zhao H, Bensaddek D, Aebersold R, Xiong L. Arabidopsis proteome and the mass spectral assay library. Scientific Data. 6: 278. PMID 31757973 DOI: 10.1038/S41597-019-0294-0  1
2019 Guo T, Luna A, Rajapakse VN, Koh CC, Wu Z, Liu W, Sun Y, Gao H, Menden MP, Xu C, Calzone L, Martignetti L, Auwerx C, Buljan M, Banaei-Esfahani A, ... ... Aebersold R, et al. Quantitative Proteome Landscape of the NCI-60 Cancer Cell Lines. Iscience. 21: 664-680. PMID 31733513 DOI: 10.1016/J.Isci.2019.10.059  1
2019 Zhu Y, Weiss T, Zhang Q, Sun R, Wang B, Yi X, Wu Z, Gao H, Cai X, Ruan G, Zhu T, Xu C, Lou S, Yu X, Gillet L, ... ... Aebersold R, et al. High-throughput proteomic analysis of FFPE tissue samples facilitates tumor stratification. Molecular Oncology. PMID 31495056 DOI: 10.1002/1878-0261.12570  1
2019 Wongpalee SP, Liu S, Gallego-Bartolomé J, Leitner A, Aebersold R, Liu W, Yen L, Nohales MA, Kuo PH, Vashisht AA, Wohlschlegel JA, Feng S, Kay SA, Zhou ZH, Jacobsen SE. CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation. Nature Communications. 10: 3916. PMID 31477705 DOI: 10.1038/S41467-019-11759-9  1
2019 Schäfer A, Gjerga E, Welford RW, Renz I, Lehembre F, Groenen PM, Saez-Rodriguez J, Aebersold R, Gstaiger M. Elucidating essential kinases of endothelin signalling by logic modelling of phosphoproteomics data. Molecular Systems Biology. 15: e8828. PMID 31464372 DOI: 10.15252/Msb.20198828  1
2019 Aebersold R, Blattmann P. Mass Spectrometric Exploration of the Biochemical Basis of Living Systems. Chimia. 73: 540-548. PMID 31431214 DOI: 10.2533/Chimia.2019.540  1
2019 Helleboid PY, Heusel M, Duc J, Piot C, Thorball CW, Coluccio A, Pontis J, Imbeault M, Turelli P, Aebersold R, Trono D. The interactome of KRAB zinc finger proteins reveals the evolutionary history of their functional diversification. The Embo Journal. e101220. PMID 31403225 DOI: 10.15252/Embj.2018101220  1
2019 Kaustov L, Lemak A, Wu H, Faini M, Fan L, Fang X, Zeng H, Duan S, Allali-Hassani A, Li F, Wei Y, Vedadi M, Aebersold R, Wang Y, Houliston S, et al. The MLL1 trimeric catalytic complex is a dynamic conformational ensemble stabilized by multiple weak interactions. Nucleic Acids Research. PMID 31400120 DOI: 10.1093/Nar/Gkz697  1
2019 Villarino NF, Lopez CM, Sams RA, Bayly WM. Pharmacokinetics of furosemide in thoroughbred horses subjected to supramaximal treadmill exercise with and without controlled access to water. Bmc Veterinary Research. 15: 275. PMID 31375096 DOI: 10.1186/s12917-019-2017-3  0.01
2019 Schwörer S, Becker F, Feller C, Baig AH, Köber U, Henze H, Kraus JM, Xin B, Lechel A, Lipka DB, Varghese CS, Schmidt M, Rohs R, Aebersold R, Medina KL, et al. Author Correction: Epigenetic stress responses induce muscle stem-cell ageing by Hoxa9 developmental signals. Nature. PMID 31363230 DOI: 10.1038/S41586-019-1455-1  1
2019 Gallitto E, Faggioli G, Pini R, Mascoli C, Ancetti S, Fenelli C, Stella A, Gargiulo M. Endovascular repair of thoraco-abdominal aortic aneurysms by fenestrated and branched endografts†. European Journal of Cardio-Thoracic Surgery : Official Journal of the European Association For Cardio-Thoracic Surgery. PMID 31323677 DOI: 10.1093/ejcts/ezz125  0.01
2019 Harris DA, Sorte DE, Lam SK, Carlson AP. Blunt cerebrovascular injury in pediatric trauma: a national database study. Journal of Neurosurgery. Pediatrics. 1-10. PMID 31323625 DOI: 10.3171/2019.5.PEDS18765  0.01
2019 Isaacs AM, Shimony JS, Morales DM, Castaneyra-Ruiz L, Hartman A, Cook M, Smyser CD, Strahle J, Smyth MD, Yan Y, McAllister JP, McKinstry RC, Limbrick DD. Feasibility of fast brain diffusion MRI to quantify white matter injury in pediatric hydrocephalus. Journal of Neurosurgery. Pediatrics. 1-8. PMID 31323624 DOI: 10.3171/2019.5.Peds18596  0.01
2019 Sánchez Fernández I, Gaínza-Lein M, Abend NS, Amengual-Gual M, Anderson A, Arya R, Brenton JN, Carpenter JL, Chapman KE, Clark J, Farias-Moeller R, Davis Gaillard W, Glauser TA, Goldstein J, Goodkin HP, et al. The onset of pediatric refractory status epilepticus is not distributed uniformly during the day. Seizure. 70: 90-96. PMID 31323566 DOI: 10.1016/J.Seizure.2019.06.017  0.01
2019 Alonso-de-Linaje V, Mangayayam MC, Tobler DJ, Dietmann KM, Espinosa R, Rives V, Dalby KN. Sorption of chlorinated hydrocarbons from synthetic and natural groundwater by organo-hydrotalcites: Towards their applications as remediation nanoparticles. Chemosphere. 236: 124369. PMID 31323555 DOI: 10.1016/j.chemosphere.2019.124369  0.01
2019 Deng YF, Ekama GA, Cui YX, Tang CJ, van Loosdrecht MCM, Chen GH, Wu D. Coupling of sulfur(thiosulfate)-driven denitratation and anammox process to treat nitrate and ammonium contained wastewater. Water Research. 163: 114854. PMID 31323502 DOI: 10.1016/J.Watres.2019.114854  0.01
2019 Morgan-Sagastume F, Jacobsson S, Olsson LE, Carlsson M, Gyllenhammar M, Sárvári Horváth I. Anaerobic treatment of oil-contaminated wastewater with methane production using anaerobic moving bed biofilm reactors. Water Research. 163: 114851. PMID 31323501 DOI: 10.1016/J.Watres.2019.07.018  0.01
2019 Blom-Høgestøl IK, Hewitt S, Chahal-Kummen M, Brunborg C, Gulseth HL, Kristinsson JA, Eriksen EF, Mala T. Bone metabolism, bone mineral density and low-energy fractures 10 years after Roux-en-Y gastric bypass. Bone. PMID 31323430 DOI: 10.1016/j.bone.2019.07.014  0.01
2019 Ekwanzala MD, Dewar JB, Kamika I, Momba MNB. Genome sequence of carbapenem-resistant Citrobacter koseri carrying bla isolated from sewage sludge. Journal of Global Antimicrobial Resistance. PMID 31323426 DOI: 10.1016/j.jgar.2019.07.011  0.01
2019 Zauderer MG, Jayakumaran G, DuBoff M, Zhang L, Francis JH, Abramson DH, Cercek A, Nash GM, Shoushtari A, Chapman P, D'Angelo S, Arnold AG, Siegel B, Fleischut MH, Ni A, et al. Brief Report: Prevalence and Preliminary Validation of Screening Criteria to Identify Carriers of Germline BAP1 Mutations. Journal of Thoracic Oncology : Official Publication of the International Association For the Study of Lung Cancer. PMID 31323388 DOI: 10.1016/j.jtho.2019.07.002  0.01
2019 Jiang W, Lee E, Newfield RS. The utility of intact parathyroid hormone level in managing hypocalcemia after thyroidectomy in children. International Journal of Pediatric Otorhinolaryngology. 125: 153-158. PMID 31323353 DOI: 10.1016/j.ijporl.2019.07.006  0.04
2019 Ter Maaten JM, Martens P, L'Hoyes W, Maass AH, Damman K, Dupont M, Mullens W. Response to cardiac resynchronization therapy across chronic kidney disease stages. Journal of Cardiac Failure. PMID 31323302 DOI: 10.1016/j.cardfail.2019.07.005  0.01
2019 Nazarnezhad S, Rahmati M, Shayannia A, Abbasi Z, Salehi M, Khaksari M. Nesfatin-1 protects PC12 cells against high glucose-induced cytotoxicity via inhibiting oxidative Stress, autophagy and apoptosis. Neurotoxicology. PMID 31323241 DOI: 10.1016/j.neuro.2019.07.001  0.01
2019 Lerner EB, Farrell BM, Colella MR, Sternig KJ, Westrich C, Cady CE, Liu JM. A centralized system for providing dispatcher assisted CPR instructions to 9-1-1 callers at multiple municipal public safety answering points. Resuscitation. PMID 31323187 DOI: 10.1016/j.resuscitation.2019.07.010  0.01
2019 Pope JE, Schu S, Sayed D, Raslan AM, Baranidharan G, Heros RD, Blomme B, Capobianco RA, Deer TR. Anatomic Lead Placement Without Paresthesia Mapping Provides Effective and Predictable Therapy During the Trial Evaluation Period: Results From the Prospective, Multicenter, Randomized, DELIVERY Study. Neuromodulation : Journal of the International Neuromodulation Society. PMID 31323175 DOI: 10.1111/Ner.13019  0.01
2019 Tanaka Y, Asano T, Kanemitsu Y, Goto T, Yoshida Y, Yasuba K, Misawa Y, Nakatani S, Kobata K. Positional differences of intronic transposons in pAMT affect the pungency level in chili pepper through altered splicing efficiency. The Plant Journal : For Cell and Molecular Biology. PMID 31323150 DOI: 10.1111/tpj.14462  0.01
2019 Mantihal S, Prakash S, Bhandari B. Texture-modified 3D printed dark chocolate: Sensory evaluation and consumer perception study. Journal of Texture Studies. PMID 31323141 DOI: 10.1111/jtxs.12472  0.01
2019 Barry T, Doheny MC, Masterson S, Conroy N, Klimas J, Segurado R, Codd M, Bury G. Community first responders for out-of-hospital cardiac arrest in adults and children. The Cochrane Database of Systematic Reviews. 7: CD012764. PMID 31323120 DOI: 10.1002/14651858.CD012764.pub2  0.01
2019 Hvidsten L, Engedal K, Selbæk G, Wyller TB, Šaltytė Benth J, Kersten H. Quality of life of family carers of persons with young-onset dementia: A Nordic two-year observational multicenter study. Plos One. 14: e0219859. PMID 31323066 DOI: 10.1371/journal.pone.0219859  0.01
2019 Borley W, Watson B, Nizhnik YP, Zeller M, Rosokha SV. Complexes of Diiodine with Heteroaromatic N-oxides:Effects of Halogen-Bond Acceptors in Halogen Bonding. The Journal of Physical Chemistry. A. PMID 31322882 DOI: 10.1021/acs.jpca.9b05549  0.01
2019 Tseng CH. Metformin reduces risk of varicose veins in type 2 diabetes patients. Diabetes/Metabolism Research and Reviews. e3206. PMID 31322821 DOI: 10.1002/dmrr.3206  0.01
2019 Yoshikawa H, Kujime S, Iwasaki M, Yoshikawa M. Poor survival of dialysis patients with unhealed wounds because of critical limb ischemia: Limb salvage and survival requires wound healing. International Wound Journal. PMID 31322818 DOI: 10.1111/iwj.13162  0.01
2019 Masuo S, Tsuda Y, Namai T, Minakawa H, Shigemoto R, Takaya N. Enzymatic cascade in Pseudomonas for pyrazine production from α-amino acids. Chembiochem : a European Journal of Chemical Biology. PMID 31322801 DOI: 10.1002/cbic.201900448  0.01
2019 Thitilertdecha P, Poungpairoj P, Tantithavorn V, Ammaranond P, Onlamoon N. Determination of cell expansion and surface molecule expression on anti-CD3/28 expanded CD4 T cells. Scandinavian Journal of Immunology. e12808. PMID 31322752 DOI: 10.1111/sji.12808  0.01
2019 Madenci AL, Dieffenbach BV, Liu Q, Yoneoka D, Knell J, Gibson TM, Yasui Y, Leisenring WM, Howell RM, Diller LR, Krull KR, Armstrong GT, Oeffinger KC, Murphy AJ, Weil BR, et al. Late-onset anorectal disease and psychosocial impact in survivors of childhood cancer: A report from the Childhood Cancer Survivor Study. Cancer. PMID 31322729 DOI: 10.1002/Cncr.32395  0.01
2019 Chun BY, Freire MV, Cestari DM. Surgical Responses and Outcomes of Bilateral Medial Rectus Recession in Esotropia With Spinocerebellar Ataxia. Journal of Pediatric Ophthalmology and Strabismus. 56: 266-270. PMID 31322719 DOI: 10.3928/01913913-20190514-01  0.01
2019 Vosseler M, El Shazly A, Parker JD, Münzel T, Gori T. Resting and recruitable endothelial function - Evidence of two distinct circadian patterns. Clinical Hemorheology and Microcirculation. PMID 31322551 DOI: 10.3233/CH-190587  0.01
2019 Ivanov V, Iuzvyshyna O, Baranova O, Shchepina N, Savitska Y. GENDER DIFFERENCES OF STRUCTURAL AND FUNCTIONAL CHANGES, AND LEFT VENTRICULAR MYOCARDIAL REMODELING IN PATIENTS WITH AORTIC VALVE CALCIFICATION. Georgian Medical News. 63-68. PMID 31322517  0.01
2019 Zhao SYF, Poccia N, Panetta MG, Yu C, Johnson JW, Yoo H, Zhong R, Gu GD, Watanabe K, Taniguchi T, Postolova SV, Vinokur VM, Kim P. Sign-Reversing Hall Effect in Atomically Thin High-Temperature Bi_{2.1}Sr_{1.9}CaCu_{2.0}O_{8+δ} Superconductors. Physical Review Letters. 122: 247001. PMID 31322397 DOI: 10.1103/Physrevlett.122.247001  0.01
2019 De Fazio D, Purdie DG, Ott A, Braeuninger-Weimer P, Khodkov T, Goossens S, Taniguchi T, Watanabe K, Livreri P, Koppens FHL, Hofmann S, Goykhman I, Ferrari AC, Lombardo A. High-Mobility, Wet-Transferred Graphene Grown by Chemical Vapor Deposition. Acs Nano. PMID 31322332 DOI: 10.1021/Acsnano.9B02621  0.01
2019 Mauro MFFP, Papelbaum M, Brasil MAA, Carneiro JRI, Coutinho ESF, Coutinho W, Appolinario JC. Is weight regain after bariatric surgery associated with psychiatric comorbidity? A systematic review and meta-analysis. Obesity Reviews : An Official Journal of the International Association For the Study of Obesity. PMID 31322316 DOI: 10.1111/obr.12907  0.01
2019 Nakamura H, Sezawa K, Hata M, Ohsaki S, Watano S. Direct translocation of nanoparticles across a model cell membrane by nanoparticle-induced local enhancement of membrane potential. Physical Chemistry Chemical Physics : Pccp. PMID 31322147 DOI: 10.1039/c9cp02935d  0.01
2019 Lv Y, Pu W, Shi L. Copper-Catalyzed Regio- and Stereoselective 1,1-Dicarbofunctionalization of Terminal Alkynes. Organic Letters. PMID 31321980 DOI: 10.1021/acs.orglett.9b02190  0.08
2019 Cheng Y, Ge R, Chen K, Dai Y. Modulation of NMDA-mediated intrinsic membrane properties of ascending commissural interneurons in neonatal rat spinal cord. Journal of Integrative Neuroscience. 18: 163-172. PMID 31321957 DOI: 10.31083/j.jin.2019.02.129  0.08
2019 Xia RZ, Zhai ZJ, Chang YY, Li HW. Clinical Applications of 3-Dimensional Printing Technology in Hip Joint. Orthopaedic Surgery. PMID 31321905 DOI: 10.1111/os.12468  0.08
2019 Tih PM, Temgbait Chimoun F, Mboh Khan E, Nshom E, Nambu W, Shields R, Wamuti BM, Golden MR, Welty T. Assisted HIV partner notification services in resource-limited settings: experiences and achievements from Cameroon. Journal of the International Aids Society. 22: e25310. PMID 31321902 DOI: 10.1002/Jia2.25310  0.01
2019 Chatenoud L, Bertuccio P, Turati F, Galeone C, Naldi L, Chatenoud L, La Vecchia C, Bach JF. Markers of microbial exposure lower the incidence of atopic dermatitis. Allergy. PMID 31321780 DOI: 10.1111/all.13990  0.01
2019 Jude EB, Nixon M, O'Leary C, Myland M, Gooch N, Shaunik A, Lew E. Evaluating Glycemic Control in Patients with Type 2 Diabetes Suboptimally Controlled on Basal Insulin: UK ATTAIN Real-World Study. Diabetes Therapy : Research, Treatment and Education of Diabetes and Related Disorders. PMID 31321748 DOI: 10.1007/s13300-019-0667-6  0.01
2019 Yasuda T, Tanaka O, Hayashi S, Nakahata Y, Yasuda Y, Omatsu T, Obora A, Kojima T, Matsuo M, Yagi N. Successful treatment of unresectable advanced rectal cancer with liver metastases by hemostasis re-irradiation of the rectal cancer and palliative low-dose whole-liver radiation therapy: a case report. Clinical Journal of Gastroenterology. PMID 31321737 DOI: 10.1007/s12328-019-01023-4  0.01
2019 Wang Z, Yang L, Hao C, Jiang H, Zhu J, Luo Z, Zheng Z, Lau JTF. A Randomized Controlled Trial Evaluating Efficacy of a Brief Setting-Based and Theory-Based Intervention Promoting Voluntary Medical Male Circumcision Among Heterosexual Male Sexually Transmitted Disease Patients in China. Aids and Behavior. PMID 31321636 DOI: 10.1007/S10461-019-02610-9  0.01
2019 Nakao S, Tanabe M, Okada M, Furukawa M, Iida E, Miyoshi K, Matsunaga N, Ito K. Liver imaging reporting and data system (LI-RADS) v2018: comparison between computed tomography and gadoxetic acid-enhanced magnetic resonance imaging. Japanese Journal of Radiology. PMID 31321619 DOI: 10.1007/s11604-019-00855-x  0.01
2019 Inoue T, Uemura M, Miyazaki K, Yamashita Y. Failure of complete hatching of ICSI-derived human blastocyst by cell herniation via small slit and insufficient expansion despite ongoing cell proliferation. Journal of Assisted Reproduction and Genetics. PMID 31321595 DOI: 10.1007/s10815-019-01521-x  0.01
2019 Gao Y, Gu H, Leburu M, Li X, Wang Y, Sheng J, Fang H, Gu M, Liang G. The heterotrimeric G protein β subunit RGB1 is required for seedling formation in rice. Rice (New York, N.Y.). 12: 53. PMID 31321558 DOI: 10.1186/s12284-019-0313-y  0.08
2019 Ivanov AV, Safenkova IV, Zherdev AV, Dzantiev BB. Recombinase polymerase amplification combined with a magnetic nanoparticle-based immunoassay for fluorometric determination of troponin T. Mikrochimica Acta. 186: 549. PMID 31321544 DOI: 10.1007/s00604-019-3686-0  0.01
2019 Kilinc F, Gessler F, Dubinski D, Won SY, Quick-Weller J, Seifert V, Behmanesh B. Academic output of German neurosurgical residents in 35 academic neurosurgery residency programs. Acta Neurochirurgica. PMID 31321540 DOI: 10.1007/s00701-019-04011-2  0.01
2019 Ogawa H, Nakahira S, Inoue M, Irei T, Hasegawa M, Kato K, Oyama K, Himura H, To T, Maki R, Nishi H, Ohara N, Mikami J, Makari Y, Nakata K, et al. Our experience of repeat laparoscopic liver resection in patients with recurrent hepatocellular carcinoma. Surgical Endoscopy. PMID 31321532 DOI: 10.1007/s00464-019-06992-8  0.01
2019 Kawata K, Aoki S, Futamata M, Yamamoto-Rikitake M, Nakao I, Enaida H, Toda S. Mesenchymal cells and fluid flow stimulation synergistically regulate the kinetics of corneal epithelial cells at the air-liquid interface. Graefe's Archive For Clinical and Experimental Ophthalmology = Albrecht Von Graefes Archiv Fur Klinische Und Experimentelle Ophthalmologie. PMID 31321523 DOI: 10.1007/s00417-019-04422-y  0.01
2019 Maruno M, Kiyosue H, Hongo N, Matsumoto S, Mori H. Correction To: Where is the Origin of the Last Normal Branch from Feeding Artery of Pulmonary Arteriovenous Malformations? Cardiovascular and Interventional Radiology. PMID 31321480 DOI: 10.1007/s00270-019-02281-y  0.01
2019 Viehof J, Livingstone E, Loscha E, Stockhammer P, Bankfalvi A, Plönes T, Mardanzai K, Zimmer L, Sucker A, Schadendorf D, Hegedüs B, Aigner C. Prognostic factors for pulmonary metastasectomy in malignant melanoma: size matters. European Journal of Cardio-Thoracic Surgery : Official Journal of the European Association For Cardio-Thoracic Surgery. PMID 31321422 DOI: 10.1093/ejcts/ezz211  0.01
2019 Kamel MK, Villena-Vargas J, Rahouma M, Lee B, Harrison S, Stiles BM, Abdelrahman AM, Altorki NK, Port JL. National trends and perioperative outcomes of robotic resection of thymic tumours in the United States: a propensity matching comparison with open and video-assisted thoracoscopic approaches†. European Journal of Cardio-Thoracic Surgery : Official Journal of the European Association For Cardio-Thoracic Surgery. PMID 31321412 DOI: 10.1093/ejcts/ezz111  0.04
2019 Hayes D, Nicholson KL, Miller R, Nance AE, Kirkby SE, Parker W, Baker PB. Quality Improvement Initiative for Assessing Allografts after Lung Transplantation. Pediatric Quality & Safety. 4: e146. PMID 31321363 DOI: 10.1097/pq9.0000000000000146  0.01
2019 Ebrahimi M, Zarrinfar H, Naseri A, Najafzadeh MJ, Fata A, Parian M, Khorsand I, Novak Babič M. Epidemiology of dermatophytosis in northeastern Iran; A subtropical region. Current Medical Mycology. 5: 16-21. PMID 31321333 DOI: 10.18502/cmm.5.2.1156  0.01
2019 Miyashita SI, Sagane Y, Uchino T, Karatsu S, Hosoya K, Huang I, Niwa K, Watanabe T, Niimura Y, Suzuki T. Atomic force microscopic image data of botulinum neurotoxin complexes with different molecular sizes. Data in Brief. 25: 104193. PMID 31321275 DOI: 10.1016/j.dib.2019.104193  0.04
2019 Glogovac G, Schumaier AP, Kennedy ME, Schramm VT, Wells J, Hasselfeld KA, Grawe BM. Narcotic Use and Resiliency Scores Do Not Predict Changes in Sleep Quality 6 Months After Arthroscopic Rotator Cuff Repair. Orthopaedic Journal of Sports Medicine. 7: 2325967119856282. PMID 31321248 DOI: 10.1177/2325967119856282  0.01
2019 Rochlin DH, Sheckter CC, Curtin CM. Which Stitch? Replacing Anecdote with Evidence in Minor Hand Surgery. Plastic and Reconstructive Surgery. Global Open. 7: e2189. PMID 31321185 DOI: 10.1097/GOX.0000000000002189  0.01
2019 Kato M, Watanabe S, Watanabe A, Utsunomiya H, Yokoyama T, Iida T. A Simple Skin Incision Design for Pediatric Superficial Branch of Superficial Circumflex Iliac Artery. Plastic and Reconstructive Surgery. Global Open. 7: e2159. PMID 31321173 DOI: 10.1097/GOX.0000000000002159  0.01
2019 Seckold R, Howley P, King BR, Bell K, Smith A, Smart CE. Dietary intake and eating patterns of young children with type 1 diabetes achieving glycemic targets. Bmj Open Diabetes Research & Care. 7: e000663. PMID 31321060 DOI: 10.1136/Bmjdrc-2019-000663  0.01
2019 Vuralli D. Clinical Approach to Hypocalcemia in Newborn Period and Infancy: Who Should Be Treated? International Journal of Pediatrics. 2019: 4318075. PMID 31320908 DOI: 10.1155/2019/4318075  0.01
2019 Hara A, Kanayama T, Noguchi K, Niwa A, Miyai M, Kawaguchi M, Ishida K, Hatano Y, Niwa M, Tomita H. Treatment Strategies Based on Histological Targets against Invasive and Resistant Glioblastoma. Journal of Oncology. 2019: 2964783. PMID 31320900 DOI: 10.1155/2019/2964783  0.01
2019 Wu SK, Santos MA, Marcus SL, Hynynen K. MR-guided Focused Ultrasound Facilitates Sonodynamic Therapy with 5-Aminolevulinic Acid in a Rat Glioma Model. Scientific Reports. 9: 10465. PMID 31320671 DOI: 10.1038/s41598-019-46832-2  0.04
2019 Sun L, Zhang Y, Han G, Hwang G, Jiang J, Joo B, Watanabe K, Taniguchi T, Kim YM, Yu WJ, Kong BS, Zhao R, Yang H. Self-selective van der Waals heterostructures for large scale memory array. Nature Communications. 10: 3161. PMID 31320651 DOI: 10.1038/S41467-019-11187-9  0.04
2019 Ye Z, Molinier C, Zhao C, Haag CR, Lynch M. Genetic control of male production in . Proceedings of the National Academy of Sciences of the United States of America. PMID 31320584 DOI: 10.1073/Pnas.1903553116  0.08
2019 Jin M, Hou X, Sun X, Zhang Y, Hu K, Zhang F. Impact of different adjuvant radiotherapy modalities on women with early-stage intermediate- to high-risk endometrial cancer. International Journal of Gynecological Cancer : Official Journal of the International Gynecological Cancer Society. PMID 31320487 DOI: 10.1136/ijgc-2019-000317  0.08
2019 Keller MJ, Wood L, Billingsley JM, Ray LL, Goymer J, Sinclair S, McGinn AP, Marzinke MA, Frank B, Srinivasan S, Liu C, Atrio JM, Espinoza L, Mugo N, Spiegel HML, et al. Tenofovir disoproxil fumarate intravaginal ring for HIV pre-exposure prophylaxis in sexually active women: a phase 1, single-blind, randomised, controlled trial. The Lancet. Hiv. PMID 31320290 DOI: 10.1016/S2352-3018(19)30145-6  0.01
2019 Jelovsek JE, Markland AD, Whitehead WE, Barber MD, Newman DK, Rogers RG, Dyer K, Visco AG, Sutkin G, Zyczynski HM, Carper B, Meikle SF, Sung VW, Gantz MG. Controlling faecal incontinence in women by performing anal exercises with biofeedback or loperamide: a randomised clinical trial. The Lancet. Gastroenterology & Hepatology. PMID 31320277 DOI: 10.1016/S2468-1253(19)30193-1  0.01
2019 Matsumoto T, Mori Y, Tanaka T, Kondo A. n-Butylamine production from glucose using a transaminase-mediated synthetic pathway in Escherichia coli. Journal of Bioscience and Bioengineering. PMID 31320263 DOI: 10.1016/j.jbiosc.2019.06.015  0.01
2019 Manabe S, Miyano K, Fujii Y, Ohshima K, Yoshida Y, Nonaka M, Uzu M, Matsuoka Y, Sato T, Uezono Y, Morimatsu H. Possible biased analgesic of hydromorphone through the G protein-over β-arrestin-mediated pathway: cAMP, CellKey™, and receptor internalization analyses. Journal of Pharmacological Sciences. PMID 31320243 DOI: 10.1016/j.jphs.2019.06.005  0.01
2019 Kawada T. Neutrophil-to-lymphocyte ratio as an indicator of prognosis in patients with pancreatic cancer. Hpb : the Official Journal of the International Hepato Pancreato Biliary Association. PMID 31320242 DOI: 10.1016/j.hpb.2019.06.010  0.01
2019 Hu JM, Chu CH, Jiang JK, Lai YL, Huang IP, Cheng AY, Yang SH, Chen CC. Robotic transanal total mesorectal excision assisted by laparoscopic transabdominal approach: A preliminary twenty-case series report. Asian Journal of Surgery. PMID 31320234 DOI: 10.1016/j.asjsur.2019.06.010  0.08
2019 Asai N, Shiota A, Ohashi W, Watanabe H, Shibata Y, Kato H, Sakanashi D, Hagihara M, Koizumi Y, Yamagishi Y, Suematsu H, Mikamo H. The SOFA score could predict the severity and prognosis of infective endocarditis. Journal of Infection and Chemotherapy : Official Journal of the Japan Society of Chemotherapy. PMID 31320197 DOI: 10.1016/j.jiac.2019.05.014  0.01
2019 Mizuno S, Isayama H, Nakai Y, Ishigaki K, Saito K, Sato T, Takeda T, Hakuta R, Saito T, Takahara N, Kogure H, Ijichi H, Tateishi K, Tada M, Shikata N, et al. Diagnostic yield of the plasma free amino acid index for pancreatic cancer in patients with diabetes mellitus. Pancreatology : Official Journal of the International Association of Pancreatology (Iap) ... [Et Al.]. PMID 31320196 DOI: 10.1016/j.pan.2019.07.002  0.01
2019 Da Silva LAL, Sandjo LP, Fratoni E, Kinoshita Moon YJ, Dalmarco EM, Biavatti MW. A single-step isolation by centrifugal partition chromatography of the potential anti-inflammatory glaucolide B from Lepidaploa chamissonis. Journal of Chromatography. A. 460362. PMID 31320134 DOI: 10.1016/j.chroma.2019.460362  0.01
2019 Kim UJ, Kimura S, Wada M. Facile preparation of cellulose-SiO composite aerogels with high SiO contents using a LiBr aqueous solution. Carbohydrate Polymers. 222: 114975. PMID 31320103 DOI: 10.1016/j.carbpol.2019.114975  0.04
2019 Park S, Shim JH, Lee B, Cho I, Park WY, Kim Y, Lee SH, Choi Y, Han J, Ahn JS, Ahn MJ, Park K, Sun JM. Paired genomic analysis of squamous cell carcinoma transformed from EGFR-mutated lung adenocarcinoma. Lung Cancer (Amsterdam, Netherlands). 134: 7-15. PMID 31319998 DOI: 10.1016/j.lungcan.2019.05.024  0.01
2019 Santo A, Pilotto S, Galetta D, Grossi F, Fasola G, Romano G, Bonanno L, Bearz A, Papi M, Roca E, Catino A, Follador A, Rijavec E, Genova C, Petrillo P, et al. Maintenance with lanreotide in small-cell lung cancer expressing somatostatine receptors: A multicenter, randomized, phase 3 trial. Lung Cancer (Amsterdam, Netherlands). 134: 121-126. PMID 31319970 DOI: 10.1016/j.lungcan.2019.06.011  0.01
2019 Hayashi H, Iihara H, Hirose C, Fukuda Y, Kitahora M, Kaito D, Yanase K, Endo J, Ohno Y, Suzuki A, Sugiyama T. Effects of pharmacokinetics-related genetic polymorphisms on the side effect profile of afatinib in patients with non-small cell lung cancer. Lung Cancer (Amsterdam, Netherlands). 134: 1-6. PMID 31319966 DOI: 10.1016/j.lungcan.2019.05.013  0.01
2019 Howard J, Lee SA, Inusa B, Cheng MYE, Bavenjit C, Reading IC, Wakeford SA, Gavlak JC, Murphy PB, Hart N, Gupta A, Sahota S, Jacob E, Chorozoglou M, Ossai C, et al. Prevention of Morbidity in Sickle Cell Disease (POMS2a)-overnight auto-adjusting continuous positive airway pressure compared with nocturnal oxygen therapy: a randomised crossover pilot study examining patient preference and safety in adults and children. Trials. 20: 442. PMID 31319882 DOI: 10.1186/S13063-019-3461-X  0.01
2019 Gao X, Sun Y, Chen ZH, Dou TX, Liang QW, Li X. Comparison of the accelerometer-based navigation system with conventional instruments for total knee arthroplasty: a propensity score-matched analysis. Journal of Orthopaedic Surgery and Research. 14: 223. PMID 31319875 DOI: 10.1186/s13018-019-1258-y  0.2
2019 Noda S, Mori Y, Oyama S, Kondo A, Araki M, Shirai T. Reconstruction of metabolic pathway for isobutanol production in Escherichia coli. Microbial Cell Factories. 18: 124. PMID 31319852 DOI: 10.1186/s12934-019-1171-4  0.01
2019 Liu YP, Jensen D, Chan CY, Wei CJ, Chang Y, Wu CH, Chiu CH. Development of a nursing-specific Mini-CEX and evaluation of the core competencies of new nurses in postgraduate year training programs in Taiwan. Bmc Medical Education. 19: 270. PMID 31319845 DOI: 10.1186/s12909-019-1705-9  0.08
2019 Núñez-Enríquez JC, Gil-Hernández AE, Jiménez-Hernández E, Fajardo-Gutiérrez A, Medina-Sansón A, Flores-Lujano J, Espinoza-Hernández LE, Duarte-Rodríguez DA, Amador-Sánchez R, Peñaloza-González JG, Torres-Nava JR, Espinosa-Elizondo RM, Flores-Villegas LV, Merino-Pasaye LE, Pérez-Saldivar ML, et al. Overweight and obesity as predictors of early mortality in Mexican children with acute lymphoblastic leukemia: a multicenter cohort study. Bmc Cancer. 19: 708. PMID 31319816 DOI: 10.1186/s12885-019-5878-8  0.01
2019 Scheibenreif L, Littmann M, Orengo C, Rost B. FunFam protein families improve residue level molecular function prediction. Bmc Bioinformatics. 20: 400. PMID 31319797 DOI: 10.1186/S12859-019-2988-X  0.04
2019 Wang J, Mishima N. Province-level estimation of waste mobile phones in China and location planning of recycling centers. Waste Management & Research : the Journal of the International Solid Wastes and Public Cleansing Association, Iswa. 734242X19861668. PMID 31319787 DOI: 10.1177/0734242X19861668  0.04
2019 Nguyen N, Nguyen T, Truong V, Dang K, Siman N, Shelley D. Impact of a tobacco cessation intervention on adherence to tobacco use treatment guidelines among village health workers in Vietnam. Global Health Promotion. 1757975919854032. PMID 31319786 DOI: 10.1177/1757975919854032  0.04
2019 Gutierrez A, Patell R, Rybicki L, Khorana AA. Predicting outcomes in patients with cancer and atrial fibrillation. Therapeutic Advances in Cardiovascular Disease. 13: 1753944719860676. PMID 31319783 DOI: 10.1177/1753944719860676  0.01
2019 Roesch PT, Velonis AJ, Sant SM, Habermann LE, Hirschtick JL. Implications of Interpersonal Violence on Population Mental Health Status in a Low-Income Urban Community-Based Sample of Adults. Journal of Interpersonal Violence. 886260519862365. PMID 31319734 DOI: 10.1177/0886260519862365  0.01
2019 Talib N, Mohamad NE, Yeap SK, Hussin Y, Aziz MNM, Masarudin MJ, Sharifuddin SA, Hui YW, Ho CL, Alitheen NB. Isolation and Characterization of spp. from Kefir Samples in Malaysia. Molecules (Basel, Switzerland). 24. PMID 31319614 DOI: 10.3390/molecules24142606  0.01
2019 Wang R, Yang S, Li Q. Coinage-Metal Bond between [1.1.1]Propellane and M/MCl/MCH (M = Cu, Ag, and Au): Cooperativity and Substituents. Molecules (Basel, Switzerland). 24. PMID 31319542 DOI: 10.3390/molecules24142601  0.12
2019 Masuoka N, Yoshimine C, Hori M, Tanaka M, Asada T, Abe K, Hisatsune T. Effects of Anserine/Carnosine Supplementation on Mild Cognitive Impairment with APOE4. Nutrients. 11. PMID 31319510 DOI: 10.3390/nu11071626  0.01
2019 Ueno K, Yamada S, Watanabe T, Negishi H, Okuno T, Tawarayama H, Ishikawa S, Miyamoto M, Uemiya S, Oumi Y. Hydrophobic *BEA-Type Zeolite Membranes on Tubular Silica Supports for Alcohol/Water Separation by Pervaporation. Membranes. 9. PMID 31319501 DOI: 10.3390/membranes9070086  0.01
2019 Fernandes GA, Algranti E, Conceição GMS, Wünsch Filho V, Toporcov TN. Lung Cancer Mortality Trends in a Brazilian City with a Long History of Asbestos Consumption. International Journal of Environmental Research and Public Health. 16. PMID 31319477 DOI: 10.3390/ijerph16142548  0.01
2019 Li Z, Ivanenko A, Meng X, Zhang Z. Photocatalytic oxidation of methanol to formaldehyde on bismuth-based semiconductors. Journal of Hazardous Materials. 380: 120822. PMID 31319333 DOI: 10.1016/j.jhazmat.2019.120822  0.01
2019 Shi Q, Li Y, Li Y, Cheng Y, Zhu W. Effects of steam explosion on lignocellulosic degradation of, and methane production from, corn stover by a co-cultured anaerobic fungus and methanogen. Bioresource Technology. 290: 121796. PMID 31319215 DOI: 10.1016/j.biortech.2019.121796  0.08
2019 Song C, Liu J, Qiu Y, Xie M, Sun J, Qi Y, Li S, Kitamura Y. Bio-regeneration of different rich CO absorption solvent via microalgae cultivation. Bioresource Technology. 290: 121781. PMID 31319210 DOI: 10.1016/j.biortech.2019.121781  0.12
2019 Kim J, Braun D, Ukaegbu C, Dhingra TG, Kastrinos F, Parmigiani G, Syngal S, Yurgelun MB. Clinical Factors Associated With Gastric Cancer in Individuals with Lynch Syndrome. Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association. PMID 31319185 DOI: 10.1016/j.cgh.2019.07.012  0.01
2019 Sun S, Zou H, Li L, Liu Q, Ding N, Zeng L, Li H, Mao S. CD123/CD33 dual-antibody modified liposomes effectively target acute myeloid leukemia cells and reduce antigen-negative escape. International Journal of Pharmaceutics. 118518. PMID 31319147 DOI: 10.1016/j.ijpharm.2019.118518  0.08
2019 Wouthuyzen-Bakker M, Sebillotte M, Lomas J, Kendrick B, Palomares EB, Murillo O, Parvizi J, Shohat N, Reinoso JC, Sánchez RE, Fernandez-Sampedro M, Senneville E, Huotari K, Allende JMB, García AB, et al. Timing of implant-removal in late acute periprosthetic joint infection. A multicenter observational study. The Journal of Infection. PMID 31319141 DOI: 10.1016/J.Jinf.2019.07.003  0.01
2019 Arisaka F, Niimura Y, Minton AP. Comparison of composition-gradient sedimentation equilibrium and composition-gradient static light scattering as techniques for quantitative characterization of biomolecular interactions: A case study. Analytical Biochemistry. PMID 31319055 DOI: 10.1016/j.ab.2019.06.010  0.01
2019 Sykes L, Asar O, Ritchie J, Raman M, Vassallo D, Alderson HV, O'Donoghue DJ, Green D, Diggle PJ, Kalra PA. The influence of multiple episodes of acute kidney injury on survival and progression to end stage kidney disease in patients with chronic kidney disease. Plos One. 14: e0219828. PMID 31318937 DOI: 10.1371/journal.pone.0219828  0.01
2019 Waldner CL, Parker S, Campbell JR. Identifying performance benchmarks and determinants for reproductive performance and calf survival using a longitudinal field study of cow-calf herds in western Canada. Plos One. 14: e0219901. PMID 31318920 DOI: 10.1371/journal.pone.0219901  0.01
2019 Beutelstetter M, Livolsi A, Greney H, Helms P, Schmidt-Mutter C, De Melo C, Roul G, Zores F, Bolle A, Dali-Youcef N, Beaugey M, Simon A, Niederhoffer N, Regnard J, Bouhaddi M, et al. Increased expression of blood muscarinic receptors in patients with reflex syncope. Plos One. 14: e0219598. PMID 31318899 DOI: 10.1371/journal.pone.0219598  0.01
2019 Magge SN, Zemel BS, Pipan ME, Gidding SS, Kelly A. Cardiometabolic Risk and Body Composition in Youth With Down Syndrome. Pediatrics. PMID 31315916 DOI: 10.1542/peds.2019-0137  0.01
2019 Bouchal P, Schubert OT, Faktor J, Capkova L, Imrichova H, Zoufalova K, Paralova V, Hrstka R, Liu Y, Ebhardt HA, Budinska E, Nenutil R, Aebersold R. Breast Cancer Classification Based on Proteotypes Obtained by SWATH Mass Spectrometry. Cell Reports. 28: 832-843.e7. PMID 31315058 DOI: 10.1016/J.Celrep.2019.06.046  1
2019 Avitan-Hersh E, Stepensky P, Zaidman I, Nevet MJ, Hanna S, Bergman R. Primary Cutaneous Clonal CD8+ T-Cell Lymphoproliferative Disorder Associated With Immunodeficiency due to RAG1 Mutation. The American Journal of Dermatopathology. PMID 31313695 DOI: 10.1097/DAD.0000000000001492  0.01
2019 Huttenhain R, Choi M, Martin de la Fuente L, Oehl K, Chang CY, Zimmermann AK, Malander S, Olsson H, Surinova S, Clough T, Heinzelmann-Schwarz V, Wild PJ, Dinulescu D, Niméus E, Vitek O, ... Aebersold R, et al. A targeted mass spectrometry strategy for developing proteomic biomarkers: a case study of epithelial ovarian cancer. Molecular & Cellular Proteomics : McP. PMID 31289117 DOI: 10.1074/Mcp.Ra118.001221  1
2019 Lee MH, O'Hara NB, Motoi H, Luat AF, Juhász C, Sood S, Asano E, Jeong JW. Novel diffusion tractography methodology using Kalman filter prediction to improve preoperative benefit-risk analysis in pediatric epilepsy surgery. Journal of Neurosurgery. Pediatrics. 1-13. PMID 31277057 DOI: 10.3171/2019.4.Peds1994  0.01
2019 Paulitschke V, Eichhoff O, Gerner C, Paulitschke P, Bileck A, Mohr T, Cheng PF, Leitner A, Guenova E, Saulite I, Freiberger SN, Irmisch A, Knapp B, Zila N, Chatziisaak TP, ... ... Aebersold R, et al. Proteomic identification of a marker signature for MAPKi resistance in melanoma. The Embo Journal. e95874. PMID 31267558 DOI: 10.15252/Embj.201695874  1
2019 Coffin JM, Wells DW, Zerbato JM, Kuruc JD, Guo S, Luke BT, Eron JJ, Bale M, Spindler J, Simonetti FR, Hill S, Kearney MF, Maldarelli F, Wu X, Mellors JW, et al. Clones of infected cells arise early in HIV-infected individuals. Jci Insight. 4. PMID 31217357 DOI: 10.1172/Jci.Insight.128432  0.01
2019 Andelman-Gur MM, Gazit T, Andelman F, Kipervasser S, Kramer U, Neufeld MY, Fried I, Fahoum F. Spatial distribution and hemispheric asymmetry of electrically evoked experiential phenomena in the human brain. Journal of Neurosurgery. 1-9. PMID 31200379 DOI: 10.3171/2019.3.JNS183429  0.01
2019 Celis-Gutierrez J, Blattmann P, Zhai Y, Jarmuzynski N, Ruminski K, Grégoire C, Ounoughene Y, Fiore F, Aebersold R, Roncagalli R, Gstaiger M, Malissen B. Quantitative Interactomics in Primary T Cells Provides a Rationale for Concomitant PD-1 and BTLA Coinhibitor Blockade in Cancer Immunotherapy. Cell Reports. 27: 3315-3330.e7. PMID 31189114 DOI: 10.1016/J.Celrep.2019.05.041  1
2019 Proudfoot NA, King-Dowling S, Cairney J, Bray SR, MacDonald MJ, Timmons BW. Physical Activity and Trajectories of Cardiovascular Health Indicators During Early Childhood. Pediatrics. PMID 31186368 DOI: 10.1542/Peds.2018-2242  0.01
2019 Shao W, Guo T, Toussaint NC, Xue P, Wagner U, Li L, Charmpi K, Zhu Y, Wu J, Buljan M, Sun R, Rutishauser D, Hermanns T, Fankhauser CD, Poyet C, ... ... Aebersold R, et al. Comparative analysis of mRNA and protein degradation in prostate tissues indicates high stability of proteins. Nature Communications. 10: 2524. PMID 31175306 DOI: 10.1038/S41467-019-10513-5  1
2019 Khadka N, Farquhar ER, Hill HE, Shi W, von Lintig J, Kiser PD. Evidence for distinct rate-limiting steps in the cleavage of alkenes by carotenoid cleavage dioxygenases. The Journal of Biological Chemistry. PMID 31138651 DOI: 10.1074/jbc.RA119.007535  0.01
2019 Gerlits O, Kong X, Cheng X, Wymore T, Blumenthal DK, Taylor P, Radić Z, Kovalevsky A. Productive reorientation of a bound oxime reactivator revealed in room-temperature X-ray structures of native and VX-inhibited human acetylcholinesterase. The Journal of Biological Chemistry. PMID 31138650 DOI: 10.1074/jbc.RA119.008725  0.01
2019 Bitra A, Nemčovičová I, Picarda G, Doukov T, Wang J, Benedict CA, Zajonc DM. Structure of human cytomegalovirus UL144, an HVEM orthologue, bound to the B and T cell Lymphocyte Attenuator. The Journal of Biological Chemistry. PMID 31126984 DOI: 10.1074/jbc.RA119.009199  0.01
2019 Terzyan SS, Shen T, Liu X, Huang Q, Teng P, Zhou M, Hilberg F, Cai J, Mooers BHM, Wu J. Structural basis of resistance of mutant RET protein tyrosine kinase to its inhibitors nintedanib and vandetanib. The Journal of Biological Chemistry. PMID 31118272 DOI: 10.1074/Jbc.Ra119.007682  0.01
2019 Ubonprasert S, Jaroensuk J, Pornthanakasem W, Kamonsutthipaijit N, Wongpituk P, Mee-Udorn P, Rungrotmongkol T, Ketchart O, Chitnumsub P, Leartsakulpanich U, Chaiyen P, Maenpuen S. A flap motif in human serine hydroxymethyl transferase is important for structural stabilization, ligand binding, and control of product release. The Journal of Biological Chemistry. PMID 31118236 DOI: 10.1074/jbc.RA119.007454  0.01
2019 Nishida H, Oyama Y, Kusaba T, Kadowaki H, Arakane M, Yokoyama S, Hatano Y, Daa T. A Case of Methotrexate-Associated Lymphoproliferative Disorder (Lymphomatoid Granulomatosis) of the Skin. The American Journal of Dermatopathology. 41: 448-452. PMID 31112139 DOI: 10.1097/DAD.0000000000001301  0.01
2019 Arturo EC, Gupta K, Hansen MR, Borne E, Jaffe EK. Biophysical characterization of full-length human phenylalanine hydroxylase provides a deeper understanding of its quaternary structure equilibrium. The Journal of Biological Chemistry. PMID 31076506 DOI: 10.1074/Jbc.Ra119.008294  0.01
2019 Sajic T, Ciuffa R, Lemos V, Xu P, Leone V, Li C, Williams EG, Makris G, Banaei-Esfahani A, Heikenwalder M, Schoonjans K, Aebersold R. A new class of protein biomarkers based on subcellular distribution: application to a mouse liver cancer model. Scientific Reports. 9: 6913. PMID 31061415 DOI: 10.1038/S41598-019-43091-Z  1
2019 Brennan FH, Jogia T, Gillespie ER, Blomster LV, Li XX, Nowlan B, Williams GM, Jacobson E, Osborne GW, Meunier FA, Taylor SM, Campbell KE, MacDonald KP, Levesque JP, Woodruff TM, et al. Complement receptor C3aR1 controls neutrophil mobilization following spinal cord injury through physiological antagonism of CXCR2. Jci Insight. 4. PMID 31045582 DOI: 10.1172/jci.insight.98254  0.01
2019 Iacobucci C, Piotrowski C, Aebersold R, Amaral BC, Andrews PC, Bernfur K, Borchers CH, Brodie NI, Bruce JE, Cao Y, Chaignepain S, Chavez JD, Claverol S, Cox J, Davis TN, et al. The First Community-Wide, Comparative Cross-linking Mass Spectrometry Study. Analytical Chemistry. PMID 31045356 DOI: 10.1021/Acs.Analchem.9B00658  1
2019 Shehu AI, Lu J, Wang P, Zhu J, Wang Y, Yang D, McMahon D, Xie W, Gonzalez FJ, Ma X. Pregnane X receptor activation potentiates ritonavir hepatotoxicity. The Journal of Clinical Investigation. 130. PMID 31039134 DOI: 10.1172/JCI128274  0.01
2019 Moore C, Blumhagen RZ, Yang IV, Walts A, Powers J, Walker T, Bishop M, Russell P, Vestal B, Cardwell J, Markin CR, Mathai SK, Schwarz MI, Steele MP, Lee J, et al. Resequencing Study Confirms Host Defense and Cell Senescence Gene Variants Contribute to the Risk of Idiopathic Pulmonary Fibrosis. American Journal of Respiratory and Critical Care Medicine. PMID 31034279 DOI: 10.1164/Rccm.201810-1891Oc  0.01
2019 Romanov N, Kuhn M, Aebersold R, Ori A, Beck M, Bork P. Disentangling Genetic and Environmental Effects on the Proteotypes of Individuals. Cell. PMID 31031010 DOI: 10.1016/J.Cell.2019.03.015  1
2019 Kuo CH, Blakely TM, Wander JD, Sarma D, Wu J, Casimo K, Weaver KE, Ojemann JG. Context-dependent relationship in high-resolution micro-ECoG studies during finger movements. Journal of Neurosurgery. 1-9. PMID 31026831 DOI: 10.3171/2019.1.Jns181840  0.01
2019 Zhu W, Zhen H, Ding N, Jing H, Huo L. Inconsistency Between Contrast-Enhanced CT and Bone Scintigraphy in Revealing Radiation Nephritis. Clinical Nuclear Medicine. PMID 31021909 DOI: 10.1097/RLU.0000000000002579  0.01
2019 Xu S, Uddin MJ, Banerjee S, Duggan K, Musee J, Kiefer JR, Ghebreselasie K, Rouzer CA, Marnett LJ. Fluorescent indomethacin-dansyl conjugates utilize the membrane-binding domain of cyclooxygenase-2 to block the opening to the active site. The Journal of Biological Chemistry. PMID 31000626 DOI: 10.1074/Jbc.Ra119.007405  0.01
2019 Sonkar VK, Kumar R, Jensen M, Wagner BA, Sharathkumar AA, Miller FJ, Fasano M, Lentz SR, Buettner GR, Dayal S. Nox2 NADPH oxidase is dispensable for platelet activation or arterial thrombosis in mice. Blood Advances. 3: 1272-1284. PMID 30995985 DOI: 10.1182/Bloodadvances.2018025569  0.01
2019 Panda A, OʼConnor G, Lo WC, Jiang Y, Margevicius S, Schluchter M, Ponsky LE, Gulani V. Targeted Biopsy Validation of Peripheral Zone Prostate Cancer Characterization With Magnetic Resonance Fingerprinting and Diffusion Mapping. Investigative Radiology. PMID 30985480 DOI: 10.1097/Rli.0000000000000569  0.01
2019 Abe H, Tanaka S, Kawara F, Toyonaga T, Ariyoshi R, Nakano Y, Sakaguchi H, Morita Y, Umegaki E, Kodama Y. Effective treatment improves the body composition of patients with esophageal motility disorders. Diseases of the Esophagus : Official Journal of the International Society For Diseases of the Esophagus. PMID 30980080 DOI: 10.1093/dote/doz022  0.01
2019 Gupta S, Sutter M, Remesh SG, Dominguez-Martin MA, Bao H, Feng XA, Chan LG, Petzold CJ, Kerfeld CA, Ralston CY. X-ray radiolytic labeling reveals the molecular basis of orange carotenoid protein photoprotection and its interactions with fluorescence recovery protein. The Journal of Biological Chemistry. PMID 30979724 DOI: 10.1074/Jbc.Ra119.007592  0.01
2019 Amon S, Meier-Abt F, Gillet LC, Dimitrieva S, Theocharides AP, Manz MG, Aebersold R. Sensitive quantitative proteomics of human hematopoietic stem and progenitor cells by data-independent acquisition mass spectrometry. Molecular & Cellular Proteomics : McP. PMID 30975897 DOI: 10.1074/Mcp.Tir119.001431  1
2019 Irani S, Sipe SN, Yang W, Burkholder NT, Lin B, Sim K, Matthews WL, Brodbelt JS, Zhang Y. Structural determinants for accurate dephosphorylation of RNA polymerase II by its cognate CTD phosphatase during eukaryotic transcription. The Journal of Biological Chemistry. PMID 30971428 DOI: 10.1074/Jbc.Ra119.007697  0.01
2019 Crowther JM, Cross PJ, Oliver MR, Leeman MM, Bartl AJ, Weatherhead AW, North RA, Donovan KA, Griffin MDW, Suzuki H, Hudson AO, Kasanmascheff M, Dobson RCJ. Structure-function analyses of two plant -diaminopimelate decarboxylase isoforms reveal that active-site gating provides stereochemical control. The Journal of Biological Chemistry. PMID 30962284 DOI: 10.1074/Jbc.Ra118.006825  0.01
2019 Gestaut D, Roh SH, Ma B, Pintilie G, Joachimiak LA, Leitner A, Walzthoeni T, Aebersold R, Chiu W, Frydman J. The Chaperonin TRiC/CCT Associates with Prefoldin through a Conserved Electrostatic Interface Essential for Cellular Proteostasis. Cell. PMID 30955883 DOI: 10.1016/J.Cell.2019.03.012  1
2019 Yennawar M, White RS, Jensen FE. AMPA receptor dysregulation and therapeutic interventions in a mouse model of CDKL5 Deficiency Disorder. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30952813 DOI: 10.1523/JNEUROSCI.2041-18.2019  0.01
2019 Hall MD, Odia Y, Allen JE, Tarapore R, Khatib Z, Niazi TN, Daghistani D, Schalop L, Chi AS, Oster W, Mehta MP. First clinical experience with DRD2/3 antagonist ONC201 in H3 K27M-mutant pediatric diffuse intrinsic pontine glioma: a case report. Journal of Neurosurgery. Pediatrics. 1-7. PMID 30952114 DOI: 10.3171/2019.2.Peds18480  0.01
2019 Ronen S, Rothschild M, Ollague J, Suster S. Clear Cell Primary Cutaneous Anaplastic Large Cell Lymphoma. The American Journal of Dermatopathology. PMID 30946100 DOI: 10.1097/DAD.0000000000001422  0.01
2019 Whyte AJ, Kietzman HW, Swanson AM, Butkovich LM, Barbee BR, Bassell GJ, Gross C, Gourley SL. Reward-related expectations trigger dendritic spine plasticity in the mouse ventrolateral orbitofrontal cortex. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30940719 DOI: 10.1523/Jneurosci.2031-18.2019  0.01
2019 Opdebeeck B, Maudsley S, Azmi A, De Maré A, De Leger W, Meijers B, Verhulst A, Evenepoel P, D'Haese PC, Neven E. Indoxyl Sulfate and p-Cresyl Sulfate Promote Vascular Calcification and Associate with Glucose Intolerance. Journal of the American Society of Nephrology : Jasn. PMID 30940651 DOI: 10.1681/Asn.2018060609  0.01
2019 El-Hassar L, Song L, Winston TJT, Large CH, Alvaro G, Santos-Sacchi J, Kaczmarek LK. Modulators of Kv3 potassium channels rescue the auditory function of Fragile X mice. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30936239 DOI: 10.1523/Jneurosci.0839-18.2019  0.01
2019 Al Khleifat A, Iacoangeli A, Shatunov A, Fang T, Sproviero W, Jones AR, Opie-Martin S, Morrison KE, Shaw PJ, Shaw CE, Powell JF, Dobson R, Newhouse SJ, Al-Chalabi A. Telomere length is greater in ALS than in controls: a whole genome sequencing study. Amyotrophic Lateral Sclerosis & Frontotemporal Degeneration. 1-6. PMID 30931641 DOI: 10.1080/21678421.2019.1586951  0.01
2019 Goel P, Khan M, Howard S, Kim G, Kiragasi B, Kikuma K, Dickman D. A screen for synaptic growth mutants reveals mechanisms that stabilize synaptic strength. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30902873 DOI: 10.1523/Jneurosci.2601-18.2019  0.01
2019 Schneider MP, Sartori AM, Ineichen BV, Moors S, Engmann AK, Hofer AS, Weinmann O, Kessler TM, Schwab ME. Anti-Nogo-A antibodies as a potential causal therapy for lower urinary tract dysfunction after spinal cord injury. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30902870 DOI: 10.1523/Jneurosci.3155-18.2019  0.01
2019 Wang D, Zhang Z, Cui S, Zhao Y, Craft S, Fikrig E, You F. ELF4 facilitates innate host defenses against by activating transcription of and . The Journal of Biological Chemistry. PMID 30898878 DOI: 10.1074/Jbc.Ra118.006321  0.01
2019 Cohen AD, Garfall AL, Stadtmauer EA, Melenhorst JJ, Lacey SF, Lancaster E, Vogl DT, Weiss BM, Dengel K, Nelson A, Plesa G, Chen F, Davis MM, Hwang WT, Young RM, et al. B cell maturation antigen-specific CAR T cells are clinically active in multiple myeloma. The Journal of Clinical Investigation. 130. PMID 30896447 DOI: 10.1172/Jci126397  0.01
2019 Leth JM, Mertens HDT, Leth-Espensen KZ, Jørgensen TJD, Ploug M. Did evolution create a flexible ligand-binding cavity in the urokinase receptor through deletion of a plesiotypic disulfide bond? The Journal of Biological Chemistry. 294: 7403-7418. PMID 30894413 DOI: 10.1074/jbc.RA119.007847  0.01
2019 Shanbhogue P, Hoffmann RM, Airola MV, Maini R, Hamelin DJ, Garcia-Diaz M, Burke JE, Hannun YA. The juxtamembrane linker in neutral sphingomyelinase-2 functions as an intramolecular allosteric switch that activates the enzyme. The Journal of Biological Chemistry. PMID 30890560 DOI: 10.1074/Jbc.Ra118.007288  0.01
2019 Thuillier P, Risson JR, Eusen Y, Uguen A, Abgral R. Retroperitoneal Pelvic Solitary Fibrous Tumor With High Tracer Uptake in 68Ga-DOTATOC PET/CT: A Rare Differential Diagnosis of Paraganglioma. Clinical Nuclear Medicine. PMID 30888990 DOI: 10.1097/RLU.0000000000002540  0.01
2019 Paudyal R, Konar AS, Obuchowski NA, Hatzoglou V, Chenevert TL, Malyarenko DI, Swanson SD, LoCastro E, Jambawalikar S, Liu MZ, Schwartz LH, Tuttle RM, Lee N, Shukla-Dave A. Repeatability of Quantitative Diffusion-Weighted Imaging Metrics in Phantoms, Head-and-Neck and Thyroid Cancers: Preliminary Findings. Tomography (Ann Arbor, Mich.). 5: 15-25. PMID 30854438 DOI: 10.18383/j.tom.2018.00044  0.01
2019 Robba C, Donnelly J, Cardim D, Tajsic T, Cabeleira M, Citerio G, Pelosi P, Smielewski P, Hutchinson P, Menon DK, Czosnyka M. Optic nerve sheath diameter ultrasonography at admission as a predictor of intracranial hypertension in traumatic brain injured patients: a prospective observational study. Journal of Neurosurgery. 1-7. PMID 30849751 DOI: 10.3171/2018.11.Jns182077  0.01
2019 Shi Z, Xin H, Tian D, Lian J, Wang J, Liu G, Ran R, Shi S, Zhang Z, Shi Y, Deng Y, Hou C, Chen Y. Modeling human point mutation diseases in Xenopus tropicalis with a modified CRISPR/Cas9 system. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. fj201802661R. PMID 30844313 DOI: 10.1096/fj.201802661R  0.01
2019 Harding RJ, Loppnau P, Ackloo S, Lemak A, Hutchinson A, Hunt B, Holehouse AS, Ho JC, Fan L, Toledo-Sherman L, Seitova A, Arrowsmith CH. Design and characterization of mutant and wild-type huntingtin proteins produced from a toolkit of scalable eukaryotic expression systems. The Journal of Biological Chemistry. PMID 30842263 DOI: 10.1074/jbc.RA118.007204  0.01
2019 Ma H, Li Y, Liang H, Chen S, Pan S, Chang L, Li S, Zhang Y, Liu X, Xu Y, Shao Y, Yang Y, Guo J. Sleep deprivation and a non-24-h working schedule lead to extensive alterations in physiology and behavior. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. fj201802727R. PMID 30841753 DOI: 10.1096/fj.201802727R  0.01
2019 Jiang G, Huang C, Liao X, Li J, Wu XR, Zeng F, Huang C. The RING domain in the anti-apoptotic protein XIAP stabilizes c-Myc protein and preserves anchorage-independent growth of bladder cancer cells. The Journal of Biological Chemistry. PMID 30819803 DOI: 10.1074/Jbc.Ra118.005621  0.01
2019 Li L, Baxter SS, Zhao P, Gu N, Zhan X. Differential interactions of missing in metastasis and insulin receptor tyrosine kinase substrate with RAB proteins in endocytosis of CXCR4. The Journal of Biological Chemistry. PMID 30808710 DOI: 10.1074/jbc.RA118.006071  0.01
2019 Sanders TH, Weiss J, Hogewood L, Chen L, Paton C, McMahan RL, Sweatt JD. Cognition-Enhancing Vagus Nerve Stimulation Alters the Epigenetic Landscape. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30804093 DOI: 10.1523/JNEUROSCI.2407-18.2019  0.01
2019 Wu CX, Liao J, Park Y, Reed X, Engel VA, Hoang NC, Takagi Y, Johnson SM, Wang M, Federici M, Nichols RJ, Sanishvili R, Cookson MR, Hoang QQ. Parkinson's disease-associated mutations in the GTPase domain of LRRK2 impair its nucleotide-dependent conformational dynamics. The Journal of Biological Chemistry. PMID 30796162 DOI: 10.1074/Jbc.Ra119.007631  0.01
2019 Gong J, Szegő ÉM, Leonov A, Benito E, Becker S, Fischer A, Zweckstetter M, Outeiro T, Schneider A. Translocator protein ligand protects against neurodegeneration in the MPTP mouse model of Parkinsonism. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30796158 DOI: 10.1523/Jneurosci.2070-18.2019  0.01
2019 Liu Q, Dwyer GK, Zhao Y, Li H, Mathews LR, Chakka AB, Chandran UR, Demetris JA, Alcorn JF, Robinson KM, Ortiz LA, Pitt B, Thomson AW, Fan MH, Billiar TR, et al. IL-33-mediated IL-13 secretion by ST2+ Treg controls inflammation after lung injury. Jci Insight. PMID 30779711 DOI: 10.1172/Jci.Insight.123919  0.01
2019 Liu Y, Mi Y, Mueller T, Kreibich S, Williams EG, Van Drogen A, Borel C, Frank M, Germain PL, Bludau I, Mehnert M, Seifert M, Emmenlauer M, Sorg I, Bezrukov F, ... ... Aebersold R, et al. Multi-omic measurements of heterogeneity in HeLa cells across laboratories. Nature Biotechnology. PMID 30778230 DOI: 10.1038/S41587-019-0037-Y  1
2019 Sana B, Chee SMQ, Wongsantichon J, Raghavan S, Robinson RC, Ghadessy FJ. Development and structural characterization of an engineered multi-copper oxidase reporter of protein-protein interactions. The Journal of Biological Chemistry. PMID 30770473 DOI: 10.1074/jbc.RA118.007141  0.01
2019 Gupta N, Singh S, Vargas L, Moore TE, Shostrom VK, Boerner BP. Prevalence of Low Bone Density and Comorbid Hypogonadism in Patients With Chronic Pancreatitis. Pancreas. PMID 30768576 DOI: 10.1097/MPA.0000000000001257  0.01
2019 Golovin RM, Vest J, Vita DJ, Broadie K. Activity-Dependent Remodeling of Olfactory Sensory Neuron Brain Innervation During an Early-Life Critical Period. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30755492 DOI: 10.1523/JNEUROSCI.2223-18.2019  0.01
2019 Bernadin O, Amirache F, Girard-Gagnepain A, Moirangthem RD, Lévy C, Ma K, Costa C, Nègre D, Reimann C, Fenard D, Cieslak A, Asnafi V, Sadek H, Mhaidly R, Cavazzana M, et al. Baboon envelope LVs efficiently transduced human adult, fetal, and progenitor T cells and corrected SCID-X1 T-cell deficiency. Blood Advances. 3: 461-475. PMID 30755435 DOI: 10.1182/bloodadvances.2018027508  0.01
2019 Blattmann P, Stutz V, Lizzo G, Richard J, Gut P, Aebersold R. Generation of a zebrafish SWATH-MS spectral library to quantify 10,000 proteins. Scientific Data. 6: 190011. PMID 30747917 DOI: 10.1038/Sdata.2019.11  1
2019 Emmert AS, Vuong SM, Shula C, Lindquist D, Yuan W, Hu YC, Mangano FT, Goto J. Characterization of a novel rat model of X-linked hydrocephalus by CRISPR-mediated mutation in L1cam. Journal of Neurosurgery. 1-14. PMID 30738385 DOI: 10.3171/2018.10.Jns181015  0.01
2019 Wang P, Zuo Y, Sun J, Zuo T, Zhang S, Guo S, Shi X, Liang M, Zhou P, Zhang L, Wang X. Structural and functional definition of a vulnerable site on the hemagglutinin of highly pathogenic avian influenza A virus H5N1. The Journal of Biological Chemistry. PMID 30737282 DOI: 10.1074/jbc.RA118.007008  0.01
2019 Folk WP, Kumari A, Iwasaki T, Pyndiah S, Johnson JC, Cassimere EK, Abdulovic-Cui AL, Sakamuro D. Loss of the tumor suppressor BIN1 enables ATM Ser/Thr kinase activation by the nuclear protein E2F1 and renders cancer cells resistant to cisplatin. The Journal of Biological Chemistry. PMID 30733337 DOI: 10.1074/Jbc.Ra118.005699  0.01
2019 Sendoel A, Subasic D, Ducoli L, Keller M, Michel E, Kohler I, Singh KD, Zheng X, Brümmer A, Imig J, Kishore S, Wu Y, Kanitz A, Kaech A, Mittal N, ... ... Aebersold R, et al. MINA-1 and WAGO-4 are part of regulatory network coordinating germ cell death and RNAi in C. elegans. Cell Death and Differentiation. PMID 30728462 DOI: 10.2210/Pdb6Fbl/Pdb  1
2019 Sanchez-Roige S, Fontanillas P, Elson SL, Gray JC, de Wit H, MacKillop J, Palmer AA. Genome-wide association studies of impulsive personality traits (BIS-11 and UPPSP) and drug experimentation in up to 22,861 adult research participants identify loci in the and genes. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30718321 DOI: 10.1523/Jneurosci.2662-18.2019  0.01
2019 Steinbusch MMF, Caron MMJ, Surtel DAM, van den Akker GGH, van Dijk PJ, Friedrich F, Zabel B, van Rhijn LW, Peffers MJ, Welting TJM. The anti-viral protein viperin regulates chondrogenic differentiation via CXCL10 protein secretion. The Journal of Biological Chemistry. PMID 30718282 DOI: 10.1074/jbc.RA119.007356  0.01
2019 Zhang X, Zhang S, Zhang L, Lu J, Zhao C, Luo F, Li D, Li X, Liu C. Heat shock protein 104 (HSP104) chaperones soluble Tau via a mechanism distinct from its disaggregase activity. The Journal of Biological Chemistry. PMID 30718279 DOI: 10.1074/jbc.RA118.005980  0.01
2019 Sakornsakolpat P, McCormack M, Bakke P, Gulsvik A, Make BJ, Crapo JD, Cho MH, Silverman EK. Genome-Wide Association Analysis of Single Breath Diffusing Capacity of Carbon Monoxide (DLCO). American Journal of Respiratory Cell and Molecular Biology. PMID 30694715 DOI: 10.1165/Rcmb.2018-0384Oc  0.01
2019 Maillefer A, Sabe M, Coste C, Bartolomei J, Jaafar J, Sentissi O. Sexual Identity Disorder and Psychosis in Klinefelter Syndrome: A Synthesis of Literature and a Case Report. The Journal of Nervous and Mental Disease. PMID 30672880 DOI: 10.1097/NMD.0000000000000930  0.01
2019 Mehdizadeh-Rad H, Singh J. Influence of Urbach energy, temperature, and longitudinal position in the active layer on carrier diffusion length in perovskite solar cells. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 30672099 DOI: 10.1002/cphc.201801038  0.01
2019 Zheng Y, Ming P, Zhu C, Si Y, Xu S, Chen A, Wang J, Zhang B. Hepatitis B virus X protein-induced SH2 domain-containing 5(SH2D5) expression promotes hepatoma cell growth via an SH2D5-transketolase interaction. The Journal of Biological Chemistry. PMID 30659097 DOI: 10.1074/jbc.RA118.005739  0.01
2019 Merő B, Radnai L, Gógl G, Tőke O, Leveles I, Koprivanacz K, Szeder B, Dülk M, Kudlik G, Vas V, Cserkaszky A, Sipeki S, Nyitray L, Vértessy BG, Buday L. Structural insights into the tyrosine phosphorylation-mediated inhibition of SH3 domain-ligand interactions. The Journal of Biological Chemistry. PMID 30659095 DOI: 10.1074/Jbc.Ra118.004732  0.01
2019 Jung D, Huh Y, Cho J. The ventral midline thalamus mediates hippocampal spatial information processes upon spatial cue changes. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30659088 DOI: 10.1523/JNEUROSCI.2127-18.2019  0.01
2019 Nakamichi Y, Fouquet T, Ito S, Watanabe M, Matsushika A, Inoue H. Structural and functional characterization of a bifunctional GH30-7 xylanase B from the filamentous fungus . The Journal of Biological Chemistry. PMID 30655295 DOI: 10.1074/jbc.RA118.007207  0.01
2019 Theofilopoulos S, Abreu de Oliveira WA, Yang S, Yutuc E, Saeed A, Abdel-Khalik J, Ullgren A, Cedazo-Minguez A, Björkhem I, Wang Y, Griffiths WJ, Arenas E. 24(),25-Epoxycholesterol and () overexpression promote midbrain dopaminergic neurogenesis . The Journal of Biological Chemistry. PMID 30655290 DOI: 10.1074/Jbc.Ra118.005639  0.01
2019 Gonzalez-Magaña A, Ibáñez de Opakua A, Romano-Moreno M, Murciano-Calles J, Merino N, Luque I, Rojas AL, Onesti S, Blanco FJ, De Biasio A. The p12 subunit of human polymerase δ uses an atypical PIP-box for molecular recognition of proliferating cell nuclear antigen (PCNA). The Journal of Biological Chemistry. PMID 30655288 DOI: 10.1074/Jbc.Ra118.006391  0.01
2019 Cho H, Shen GQ, Wang X, Wang F, Archacki S, Li Y, Yu G, Chakrabarti S, Chen Q, Wang QK. Long noncoding RNA ANRIL regulates endothelial cell activities associated with coronary artery disease by up-regulating CLIP1, EZR, and LYVE1 genes. The Journal of Biological Chemistry. PMID 30655286 DOI: 10.1074/jbc.RA118.005050  0.01
2019 Fialkowski AC, Levy DJ, Watkins-Chow DE, Palmer JW, Darji R, Tiwari HK, Pavan WJ, Harris ML. Identification of Gene Variants Associated with Melanocyte Stem Cell Differentiation in Mice Predisposed for Hair Graying. G3 (Bethesda, Md.). PMID 30651286 DOI: 10.1534/g3.118.200965  0.01
2019 Zeng Z, Xia L, Fan X, Ostriker AC, Yarovinsky T, Su M, Zhang Y, Peng X, Yi X, Pi L, Gu X, Chung SK, Martin KA, Liu R, Hwa J, et al. Platelet-derived miR-223 promotes a phenotypic switch in arterial injury repair. The Journal of Clinical Investigation. PMID 30645204 DOI: 10.1172/JCI124508  0.01
2019 Heusel M, Bludau I, Rosenberger G, Hafen R, Frank M, Banaei-Esfahani A, van Drogen A, Collins BC, Gstaiger M, Aebersold R. Complex-centric proteome profiling by SEC-SWATH-MS. Molecular Systems Biology. 15: e8438. PMID 30642884 DOI: 10.15252/Msb.20188438  1
2019 Ziegler CS, Bouchab L, Tramier M, Durand D, Fieschi F, Dupré-Crochet S, Mérola F, Nüße O, Erard M. Quantitative live-cell imaging and 3D modeling reveal critical functional features in the cytosolic complex of phagocyte NADPH oxidase. The Journal of Biological Chemistry. PMID 30630949 DOI: 10.1074/Jbc.Ra118.006864  0.01
2019 Esneau C, Raynal B, Roblin P, Brûlé S, Richard CA, Fix J, Eléouët JF, Galloux M. Biochemical characterization of the respiratory syncytial virus N-P complex in solution. The Journal of Biological Chemistry. PMID 30626736 DOI: 10.1074/jbc.RA118.006453  0.01
2019 Sundström J, Björkelund C, Giedraitis V, Hansson PO, Högman M, Janson C, Koupil I, Kristenson M, Trolle Lagerros Y, Leppert J, Lind L, Lissner L, Johansson I, Ludvigsson JF, Nilsson PM, et al. Rationale for a Swedish cohort consortium. Upsala Journal of Medical Sciences. 1-8. PMID 30618330 DOI: 10.1080/03009734.2018.1556754  0.01
2019 Liao CH, Chen WH, Liao NC, Tsuei YS. CTA-guided outflow-targeted embolization of direct carotid-cavernous fistula. Neurosurgical Focus. 46: V11. PMID 30611182 DOI: 10.3171/2019.1.FocusVid.18447  0.01
2019 Chandrasekaran C, Bray IE, Shenoy KV. Frequency shifts and depth dependence of premotor beta band activity during perceptual decision-making. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30606756 DOI: 10.1523/JNEUROSCI.1066-18.2018  0.01
2019 Yang A, Fan H, Zhao Y, Chen X, Zhu Z, Zha X, Zhao Y, Chai X, Li J, Tu P, Hu Z. An immune-stimulating proteoglycan from the medicinal mushroom Huaier up-regulates NF-κB and MAPK signaling via Toll-like receptor 4. The Journal of Biological Chemistry. PMID 30602571 DOI: 10.1074/jbc.RA118.005477  0.01
2019 Manta B, Möller MN, Bonilla M, Deambrosi M, Grunberg K, Bellanda M, Comini MA, Ferrer-Sueta G. Kinetic studies reveal a key role of a redox-active glutaredoxin in the evolution of the thiol-redox metabolism of trypanosomatid parasites. The Journal of Biological Chemistry. 294: 3235-3248. PMID 30593501 DOI: 10.1074/jbc.RA118.006366  0.01
2019 Chelini G, Zerbi V, Cimino L, Grigoli A, Markicevic M, Libera F, Robbiati S, Gadler M, Bronzoni S, Miorelli S, Galbusera A, Gozzi A, Casarosa S, Provenzano G, Bozzi Y. Aberrant Somatosensory Processing and Connectivity in Mice Lacking . The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 39: 1525-1538. PMID 30593497 DOI: 10.1523/Jneurosci.0612-18.2018  0.01
2019 Bitra A, Doukov T, Destito G, Croft M, Zajonc DM. Crystal structure of the m4-1BB/4-1BBL complex reveals an unusual dimeric ligand that undergoes structural changes upon 4-1BB receptor binding. The Journal of Biological Chemistry. 294: 1831-1845. PMID 30545939 DOI: 10.1074/jbc.RA118.006297  0.01
2019 Schiano-di-Cola C, Røjel N, Jensen K, Kari J, Sørensen TH, Borch K, Westh P. Systematic deletions in the cellobiohydrolase (CBH) Cel7A from the fungus reveal flexible loops critical for CBH activity. The Journal of Biological Chemistry. 294: 1807-1815. PMID 30538133 DOI: 10.1074/jbc.RA118.006699  0.01
2019 Arroyo ED, Fiole D, Mantri SS, Huang C, Portera-Cailliau C. Dendritic Spines in Early Postnatal Fragile X Mice Are Insensitive to Novel Sensory Experience. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 39: 412-419. PMID 30523064 DOI: 10.1523/Jneurosci.1734-18.2018  0.01
2019 Gochicoa-Rangel L, Del-Río-Hidalgo R, Álvarez-Arroyo MR, Martínez-Briseño D, Mora-Romero U, Martínez-Valdeavellano L, Navarrete-Rivera J, Rodríguez-Moreno L, Guerrero-Zúñiga S, Fernández-Plata R, Cantú-González G, Cid-Juárez S, García-Sancho C, Thirión-Romero I, Silva-Cerón M, et al. Diffusing Capacity of the Lung for Carbon Monoxide in Mexican/Latino Children. Quality Control and Reference Values. Annals of the American Thoracic Society. 16: 240-247. PMID 30517026 DOI: 10.1513/AnnalsATS.201712-922OC  0.01
2019 Gabay AS, Kempton MJ, Gilleen J, Mehta MA. MDMA Increases Cooperation and Recruitment of Social Brain Areas When Playing Trustworthy Players in an Iterated Prisoner's Dilemma. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 39: 307-320. PMID 30455187 DOI: 10.1523/JNEUROSCI.1276-18.2018  0.01
2019 Koufatzidou M, Koletsi D, Fleming PS, Polychronopoulou A, Pandis N. Outcome reporting discrepancies between trial entries and published final reports of orthodontic randomized controlled trials. European Journal of Orthodontics. 41: 225-230. PMID 29992332 DOI: 10.1093/ejo/cjy046  0.01
2019 Klingauf-Nerurkar P, Gillet LC, Portugal-Calisto D, Oborská-Oplová M, Jäger M, Schubert OT, Pisano A, Peña C, Rao S, Altvater M, Chang Y, Aebersold R, Panse VG. Author response: The GTPase Nog1 co-ordinates the assembly, maturation and quality control of distant ribosomal functional centers Elife. DOI: 10.7554/Elife.52474.Sa2  1
2019 Meier-Abt F, Amon S, Gillet L, Wolski W, Dimitrieva S, Theocharides A, Manz M, Aebersold R. TRANSCRIPTOME-PROTEOME CORRELATION IN HUMAN HEMATOPOIETIC STEM AND PROGENITOR CELLS Hemasphere. 3: 178. DOI: 10.1097/01.hs9.0000560112.85151.fc  0.01
2019 lanton t, Levkovitch O, Abramovitch R, Perles S, Tam J, Udi S, Williams E, Aebersold R, Elinav E, Pevsner-Fischer M, Rachmilewitz J, Rose-John S, Galun E, Axelrod J. FRI-297-Trans-signaling blockade induces mature-onset obesity and insulin resistance in mice via suppression of PPARalpha Journal of Hepatology. 70: e526. DOI: 10.1016/S0618-8278(19)31041-2  0.01
2019 Orlando E, Aebersold R. On the contribution of mass spectrometry-based platforms to the field of personalized oncology Trac Trends in Analytical Chemistry. 110: 129-142. DOI: 10.1016/J.Trac.2018.10.018  0.01
2018 For The Study Of The Liver LAA. XXV ANNUAL MEETING OF THE LATIN AMERICAN ASSOCIATION FOR THE STUDY OF THE LIVER (ALEH, for its acronym in Spanish). Annals of Hepatology. 17: 1085-1211. PMID 30600286 DOI: 10.5604/01.3001.0012.7214  0.01
2018 Lin M, Liao P, Chen H, Chang C, Chen S, Chern Y. Degeneration of ipRGCs in mouse models of Huntington's Disease disrupts non-image forming behaviors prior to motor impairment. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30587542 DOI: 10.1523/Jneurosci.0571-18.2018  0.01
2018 Harold LK, Antoney J, Ahmed FH, Hards K, Carr PD, Rapson T, Greening C, Jackson CJ, Cook GM. FAD-sequestering proteins protect mycobacteria against hypoxic and oxidative stress. The Journal of Biological Chemistry. PMID 30567740 DOI: 10.1074/Jbc.Ra118.006237  0.01
2018 Paštyková V, Novotný J, Veselský T, Urgošík D, Liščák R, Vymazal J. Assessment of MR stereotactic imaging and image co-registration accuracy for 3 different MR scanners by 3 different methods/phantoms: phantom and patient study. Journal of Neurosurgery. 129: 125-132. PMID 30544292 DOI: 10.3171/2018.7.GKS181527  0.01
2018 Carlson BB, Saville P, Dowdell J, Goto R, Vaishnav A, Gang CH, McAnany S, Albert TJ, Qureshi S. Restoration of Lumbar Lordosis After Minimally Invasive Transforaminal Lumbar Interbody Fusion: A Systematic Review. The Spine Journal : Official Journal of the North American Spine Society. PMID 30529420 DOI: 10.1016/j.spinee.2018.10.017  0.01
2018 Karlsson E, Andersson E, Dogan J, Gianni S, Jemth P, Camilloni C. A structurally heterogeneous transition state underlies coupled binding and folding of disordered proteins. The Journal of Biological Chemistry. PMID 30514761 DOI: 10.1074/Jbc.Ra118.005854  0.01
2018 Parikh P, Britt RD, Manlove LJ, Wicher SA, Roesler A, Ravix J, Teske J, Thompson MA, Sieck GC, Kirkland JL, LeBrasseur N, Tschumperlin DJ, Pabelick CM, Prakash YS. Hyperoxia-Induced Cellular Senescence in Fetal Airway Smooth Muscle Cells. American Journal of Respiratory Cell and Molecular Biology. PMID 30508396 DOI: 10.1165/Rcmb.2018-0176Oc  0.01
2018 Shioi N, Tadokoro T, Shioi S, Okabe Y, Matsubara H, Kita S, Ose T, Kuroki K, Terada S, Maenaka K. Crystal structure of the complex between venom toxin and serum inhibitor from viperidae snake. The Journal of Biological Chemistry. PMID 30504218 DOI: 10.1074/jbc.RA118.006840  0.01
2018 Gayle SS, Sahni JM, Webb BM, Weber-Bonk KL, Shively MS, Spina R, Bar EE, Summers MK, Keri RA. Targeting BCL-xL improves the efficacy of bromodomain and extra-terminal protein inhibitors in triple-negative breast cancer by eliciting the death of senescent cells. The Journal of Biological Chemistry. PMID 30482844 DOI: 10.1074/Jbc.Ra118.004712  0.01
2018 Duan JE, Flock K, Jue N, Zhang M, Jones A, Al Seesi S, Mandoiu I, Pillai S, Hoffman M, O'Neill R, Zinn S, Govoni K, Reed S, Jiang H, Jiang ZC, et al. Dosage Compensation and Gene Expression of the X Chromosome in Sheep. G3 (Bethesda, Md.). PMID 30482800 DOI: 10.1534/G3.118.200815  0.01
2018 Bogdanovic X, Schneider S, Levanova N, Wirth C, Trillhaase C, Steinemann M, Hunte C, Aktories K, Jank T. A cysteine protease-like domain enhances the cytotoxic effects of the toxin PaTox. The Journal of Biological Chemistry. PMID 30478175 DOI: 10.1074/jbc.RA118.005043  0.01
2018 Yan Y, Zhou XE, Novick SJ, Shaw SJ, Li Y, Brunzelle JS, Hitoshi Y, Griffin PR, Xu HE, Melcher K. Structures of AMP-activated protein kinase bound to novel pharmacological activators in phosphorylated, non-phosphorylated, and nucleotide-free states. The Journal of Biological Chemistry. PMID 30478170 DOI: 10.1074/jbc.RA118.004883  0.01
2018 Yun JH, Li X, Park JH, Wang Y, Ohki M, Jin Z, Lee W, Park SY, Hu H, Li C, Zatsepin N, Hunter MS, Sierra RG, Koralek J, Yoon CH, et al. Non-cryogenic structure of a chloride pump provides crucial clues to temperature-dependent channel transport efficiency. The Journal of Biological Chemistry. PMID 30455349 DOI: 10.1074/Jbc.Ra118.004038  0.01
2018 McGonigal R, Barrie JA, Yao D, McLaughlin M, Cunningham ME, Rowan EG, Willison HJ. Glial sulfatides and neuronal complex gangliosides are functionally interdependent in maintaining myelinating axon integrity. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30446529 DOI: 10.1523/JNEUROSCI.2095-18.2018  0.01
2018 Heckova E, Strasser B, Hangel GJ, Považan M, Dal-Bianco A, Rommer PS, Bednarik P, Gruber S, Leutmezer F, Lassmann H, Trattnig S, Bogner W. 7 T Magnetic Resonance Spectroscopic Imaging in Multiple Sclerosis: How Does Spatial Resolution Affect the Detectability of Metabolic Changes in Brain Lesions? Investigative Radiology. PMID 30433892 DOI: 10.1097/RLI.0000000000000531  0.01
2018 Collins BC, Aebersold R. Proteomics goes parallel. Nature Biotechnology. 36: 1051-1053. PMID 30412198 DOI: 10.1038/Nbt.4288  1
2018 Zhu Y, Zhu J, Lu C, Zhang Q, Xie W, Sun P, Dong X, Yue L, Sun Y, Yi X, Zhu T, Ruan G, Aebersold R, Huang S, Guo T. Identification of Protein Abundance Changes in Hepatocellular Carcinoma Tissues using PCT-SWATH. Proteomics. Clinical Applications. e1700179. PMID 30365225 DOI: 10.1002/Prca.201700179  1
2018 Forchelet D, Béguin S, Sajic T, Bararpour N, Pataky Z, Frias M, Grabherr S, Augsburger M, Liu Y, Charnley M, Déglon J, Aebersold R, Thomas A, Renaud P. Separation of blood microsamples by exploiting sedimentation at the microscale. Scientific Reports. 8: 14101. PMID 30237536 DOI: 10.1038/S41598-018-32314-4  1
2018 Schütz S, Michel E, Damberger FF, Oplová M, Peña C, Leitner A, Aebersold R, Allain FH, Panse VG. Molecular basis for disassembly of an importin:ribosomal protein complex by the escortin Tsr2. Nature Communications. 9: 3669. PMID 30201955 DOI: 10.1038/S41467-018-06160-X  1
2018 Chowdhury S, Otomo C, Leitner A, Ohashi K, Aebersold R, Lander GC, Otomo T. Insights into autophagosome biogenesis from structural and biochemical analyses of the ATG2A-WIPI4 complex. Proceedings of the National Academy of Sciences of the United States of America. PMID 30185561 DOI: 10.1073/Pnas.1811874115  1
2018 Panduro A. The Editorial Challenges Faced by International Medical Journals in Latin America. Annals of Hepatology. 17: 749-751. PMID 30145573 DOI: 10.5604/01.3001.0012.3131  0.01
2018 Brahmand J, Contreras Peña FA. Present, Past,and Future of the Latin American Association for the Study of the Liver- Asociación Latinoamericana para el Estudio del Higado (ALEH). Annals of Hepatology. 17: 888-890. PMID 30145569 DOI: 10.5604/01.3001.0012.3174  0.01
2018 Ludwig C, Gillet L, Rosenberger G, Amon S, Collins BC, Aebersold R. Data-independent acquisition-based SWATH-MS for quantitative proteomics: a tutorial. Molecular Systems Biology. 14: e8126. PMID 30104418 DOI: 10.15252/Msb.20178126  1
2018 Guo T, Li L, Zhong Q, Rupp NJ, Charmpi K, Wong CE, Wagner U, Rueschoff JH, Jochum W, Fankhauser CD, Saba K, Poyet C, Wild PJ, Aebersold R, Beyer A. Multi-region proteome analysis quantifies spatial heterogeneity of prostate tissue biomarkers. Life Science Alliance. 1. PMID 30090875 DOI: 10.26508/lsa.201800042  1
2018 Schuster H, Shao W, Weiss T, Pedrioli PGA, Roth P, Weller M, Campbell DS, Deutsch EW, Moritz RL, Planz O, Rammensee HG, Aebersold R, Caron E. A tissue-based draft map of the murine MHC class I immunopeptidome. Scientific Data. 5: 180157. PMID 30084848 DOI: 10.1038/Sdata.2018.157  1
2018 Ebhardt HA, Root A, Liu Y, Gauthier NP, Sander C, Aebersold R. Systems pharmacology using mass spectrometry identifies critical response nodes in prostate cancer. Npj Systems Biology and Applications. 4: 26. PMID 29977602 DOI: 10.1038/s41540-018-0064-1  1
2018 Williams EG, Wu Y, Ryu D, Kim JY, Lan J, Hasan M, Wolski W, Jha P, Halter C, Auwerx J, Aebersold R. Quantifying and Localizing the Mitochondrial Proteome Across Five Tissues in A Mouse Population. Molecular & Cellular Proteomics : McP. PMID 29945935 DOI: 10.1074/Mcp.Ra118.000554  1
2018 Henry N, Krammer EM, Stengel F, Adams Q, Van Liefferinge F, Hubin E, Chaves R, Efremov R, Aebersold R, Vandenbussche G, Prévost M, Raussens V, Deroo S. Lipidated apolipoprotein E4 structure and its receptor binding mechanism determined by a combined cross-linking coupled to mass spectrometry and molecular dynamics approach. Plos Computational Biology. 14: e1006165. PMID 29933361 DOI: 10.1371/journal.pcbi.1006165  1
2018 Bleichert F, Leitner A, Aebersold R, Botchan MR, Berger JM. Conformational control and DNA-binding mechanism of the metazoan origin recognition complex. Proceedings of the National Academy of Sciences of the United States of America. PMID 29899147 DOI: 10.1073/Pnas.1806315115  1
2018 Sajic T, Liu Y, Arvaniti E, Surinova S, Williams EG, Schiess R, Hüttenhain R, Sethi A, Pan S, Brentnall TA, Chen R, Blattmann P, Friedrich B, Niméus E, Malander S, ... ... Aebersold R, et al. Similarities and Differences of Blood N-Glycoproteins in Five Solid Carcinomas at Localized Clinical Stage Analyzed by SWATH-MS. Cell Reports. 23: 2819-2831.e5. PMID 29847809 DOI: 10.1016/J.Celrep.2018.04.114  1
2018 Feller C, Aebersold R. A Proteomic Connectivity Map. Cell Systems. 6: 403-405. PMID 29698646 DOI: 10.1016/J.Cels.2018.04.007  1
2018 Hülsmann J, Kravic B, Weith M, Gstaiger M, Aebersold RH, Collins BC, Meyer H. AP-SWATH reveals direct involvement of VCP/p97 in integrated stress response signaling through facilitating CReP/PPP1R15B degradation. Molecular & Cellular Proteomics : McP. PMID 29599191 DOI: 10.1074/Mcp.Ra117.000471  1
2018 Buljan M, Blattmann P, Aebersold R, Boutros M. Systematic characterization of pan-cancer mutation clusters. Molecular Systems Biology. 14: e7974. PMID 29572294 DOI: 10.15252/Msb.20177974  1
2018 Malone KM, Rue-Albrecht K, Magee DA, Conlon K, Schubert OT, Nalpas NC, Browne JA, Smyth A, Gormley E, Aebersold R, MacHugh DE, Gordon SV. Comparative 'omics analyses differentiate Mycobacterium tuberculosis and Mycobacterium bovis and reveal distinct macrophage responses to infection with the human and bovine tubercle bacilli. Microbial Genomics. PMID 29557774 DOI: 10.1099/mgen.0.000163  1
2018 Clerici M, Faini M, Muckenfuss LM, Aebersold R, Jinek M. Author Correction: Structural basis of AAUAAA polyadenylation signal recognition by the human CPSF complex. Nature Structural & Molecular Biology. PMID 29540792 DOI: 10.1038/S41594-018-0044-6  1
2018 Uzozie AC, Aebersold R. Advancing translational research and precision medicine with targeted proteomics. Journal of Proteomics. PMID 29476807 DOI: 10.1016/J.Jprot.2018.02.021  0.01
2018 Aebersold R, Agar JN, Amster IJ, Baker MS, Bertozzi CR, Boja ES, Costello CE, Cravatt BF, Fenselau C, Garcia BA, Ge Y, Gunawardena J, Hendrickson RC, Hergenrother PJ, Huber CG, et al. How many human proteoforms are there? Nature Chemical Biology. 14: 206-214. PMID 29443976 DOI: 10.1038/Nchembio.2576  1
2018 Yoon J, Kim SJ, An S, Cho S, Leitner A, Jung T, Aebersold R, Hebert H, Cho US, Song JJ. Integrative structural investigation on the architecture of human Importin4_histone H3/H4_Asf1a complex and its histone H3 tail binding. Journal of Molecular Biology. PMID 29408485 DOI: 10.1016/J.Jmb.2018.01.015  1
2018 Eliseev B, Yeramala L, Leitner A, Karuppasamy M, Raimondeau E, Huard K, Alkalaeva E, Aebersold R, Schaffitzel C. Structure of a human cap-dependent 48S translation pre-initiation complex. Nucleic Acids Research. PMID 29401259 DOI: 10.1093/Nar/Gky054  1
2018 Clerici M, Faini M, Muckenfuss LM, Aebersold R, Jinek M. Structural basis of AAUAAA polyadenylation signal recognition by the human CPSF complex. Nature Structural & Molecular Biology. PMID 29358758 DOI: 10.2210/Pdb6Fbs/Pdb  1
2018 Kasinath V, Faini M, Poepsel S, Reif D, Feng XA, Stjepanovic G, Aebersold R, Nogales E. Structures of human PRC2 with its cofactors AEBP2 and JARID2. Science (New York, N.Y.). PMID 29348366 DOI: 10.1126/Science.Aar5700  1
2018 Sajic T, Arni S, Weder W, Aebersold R, Hillinger S. P2.03-13 SWATH MS Analysis of Serine Hydrolase Activity in Human Lung Adenocarcinoma for Biomarker Discovery Journal of Thoracic Oncology. 13. DOI: 10.1016/J.Jtho.2018.08.1200  1
2017 Clerici M, Faini M, Aebersold R, Jinek M. Structural insights into the assembly and polyA signal recognition mechanism of the human CPSF complex. Elife. 6. PMID 29274231 DOI: 10.7554/Elife.33111  1
2017 Blattmann P, Henriques D, Zimmermann M, Frommelt F, Sauer U, Saez-Rodriguez J, Aebersold R. Systems Pharmacology Dissection of Cholesterol Regulation Reveals Determinants of Large Pharmacodynamic Variability between Cell Lines. Cell Systems. PMID 29226804 DOI: 10.1016/J.Cels.2017.11.002  1
2017 Patel N, Stengel F, Aebersold R, Gold MG. Molecular basis of AKAP79 regulation by calmodulin. Nature Communications. 8: 1681. PMID 29162807 DOI: 10.1038/S41467-017-01715-W  1
2017 Boztas N, Omur D, Ozbılgın S, Altuntas G, Piskin E, Ozkardesler S, Hanci V. Readability of internet-sourced patient education material related to "labour analgesia". Medicine. 96: e8526. PMID 29137057 DOI: 10.1097/MD.0000000000008526  0.01
2017 Liu Y, Borel C, Li L, Müller T, Williams EG, Germain PL, Buljan M, Sajic T, Boersema PJ, Shao W, Faini M, Testa G, Beyer A, Antonarakis SE, Aebersold R. Systematic proteome and proteostasis profiling in human Trisomy 21 fibroblast cells. Nature Communications. 8: 1212. PMID 29089484 DOI: 10.1038/S41467-017-01422-6  1
2017 Banaei-Esfahani A, Nicod C, Aebersold R, Collins BC. Systems proteomics approaches to study bacterial pathogens: application to Mycobacterium tuberculosis. Current Opinion in Microbiology. 39: 64-72. PMID 29032348 DOI: 10.1016/J.Mib.2017.09.013  1
2017 Shao W, Pedrioli PGA, Wolski W, Scurtescu C, Schmid E, Vizcaíno JA, Courcelles M, Schuster H, Kowalewski D, Marino F, Arlehamn CSL, Vaughan K, Peters B, Sette A, Ottenhoff THM, ... ... Aebersold R, et al. The SysteMHC Atlas project. Nucleic Acids Research. PMID 28985418 DOI: 10.1093/Nar/Gkx664  1
2017 Schwenk JM, Omenn GS, Sun Z, Campbell DS, Baker MS, Overall CM, Aebersold R, Moritz RL, Deutsch EW. The Human Plasma Proteome Draft of 2017: Building on the Human Plasma PeptideAtlas from Mass Spectrometry and Complementary Assays. Journal of Proteome Research. PMID 28938075 DOI: 10.1021/Acs.Jproteome.7B00467  1
2017 Collins BC, Hunter CL, Liu Y, Schilling B, Rosenberger G, Bader SL, Chan DW, Gibson BW, Gingras AC, Held JM, Hirayama-Kurogi M, Hou G, Krisp C, Larsen B, Lin L, ... ... Aebersold R, et al. Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry. Nature Communications. 8: 291. PMID 28827567 DOI: 10.1038/S41467-017-00249-5  1
2017 Rosenberger G, Bludau I, Schmitt U, Heusel M, Hunter CL, Liu Y, MacCoss MJ, MacLean BX, Nesvizhskii AI, Pedrioli PGA, Reiter L, Röst HL, Tate S, Ting YS, Collins BC, ... Aebersold R, et al. Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses. Nature Methods. PMID 28825704 DOI: 10.1038/Nmeth.4398  1
2017 Caron E, Aebersold R, Banaei-Esfahani A, Chong C, Bassani-Sternberg M. A Case for a Human Immuno-Peptidome Project Consortium. Immunity. 47: 203-208. PMID 28813649 DOI: 10.1016/J.Immuni.2017.07.010  1
2017 Cortes T, Schubert OT, Banaei-Esfahani A, Collins BC, Aebersold R, Young DB. Delayed effects of transcriptional responses in Mycobacterium tuberculosis exposed to nitric oxide suggest other mechanisms involved in survival. Scientific Reports. 7: 8208. PMID 28811595 DOI: 10.1038/S41598-017-08306-1  1
2017 Liu Y, Gonzàlez-Porta M, Santos S, Brazma A, Marioni JC, Aebersold R, Venkitaraman AR, Wickramasinghe VO. Impact of Alternative Splicing on the Human Proteome. Cell Reports. 20: 1229-1241. PMID 28768205 DOI: 10.1016/J.Celrep.2017.07.025  1
2017 Wu Y, Williams EG, Aebersold R. Application of SWATH Proteomics to Mouse Biology. Current Protocols in Mouse Biology. 7: 130-143. PMID 28628219 DOI: 10.1002/Cpmo.28  1
2017 Rosenberger G, Liu Y, Röst HL, Ludwig C, Buil A, Bensimon A, Soste M, Spector TD, Dermitzakis ET, Collins BC, Malmström L, Aebersold R. Inference and quantification of peptidoforms in large sample cohorts by SWATH-MS. Nature Biotechnology. PMID 28604659 DOI: 10.1038/Nbt.3908  1
2017 Tan SLW, Chadha S, Liu Y, Gabasova E, Perera D, Ahmed K, Constantinou S, Renaudin X, Lee M, Aebersold R, Venkitaraman AR. A Class of Environmental and Endogenous Toxins Induces BRCA2 Haploinsufficiency and Genome Instability. Cell. 169: 1105-1118.e15. PMID 28575672 DOI: 10.1016/J.Cell.2017.05.010  1
2017 Schubert OT, Röst HL, Collins BC, Rosenberger G, Aebersold R. Quantitative proteomics: challenges and opportunities in basic and applied research. Nature Protocols. 12: 1289-1294. PMID 28569762 DOI: 10.1038/Nprot.2017.040  1
2017 Malone KM, Farrell D, Stuber TP, Schubert OT, Aebersold R, Robbe-Austerman S, Gordon SV. Updated Reference Genome Sequence and Annotation of Mycobacterium bovis AF2122/97. Genome Announcements. 5. PMID 28385856 DOI: 10.1128/Genomea.00157-17  1
2017 Caron E, Roncagalli R, Hase T, Wolski WE, Choi M, Menoita MG, Durand S, García-Blesa A, Fierro-Monti I, Sajic T, Heusel M, Weiss T, Malissen M, Schlapbach R, Collins BC, ... ... Aebersold R, et al. Precise Temporal Profiling of Signaling Complexes in Primary Cells Using SWATH Mass Spectrometry. Cell Reports. 18: 3219-3226. PMID 28355572 DOI: 10.1016/J.Celrep.2017.03.019  1
2017 Dorn G, Leitner A, Boudet J, Campagne S, von Schroetter C, Moursy A, Aebersold R, Allain FH. Structural modeling of protein-RNA complexes using crosslinking of segmentally isotope-labeled RNA and MS/MS. Nature Methods. PMID 28346450 DOI: 10.1038/Nmeth.4235  1
2017 Yadav L, Tamene F, Göös H, van Drogen A, Katainen R, Aebersold R, Gstaiger M, Varjosalo M. Systematic Analysis of Human Protein Phosphatase Interactions and Dynamics. Cell Systems. PMID 28330616 DOI: 10.1016/J.Cels.2017.02.011  1
2017 Zhang L, Okada T, Badawy SM, Hirai C, Kajimoto T, Nakamura SI. Extracellular α-synuclein induces sphingosine 1-phosphate receptor subtype 1 uncoupled from inhibitory G-protein leaving β-arrestin signal intact. Scientific Reports. 7: 44248. PMID 28300069 DOI: 10.1038/srep44248  0.08
2017 Ebhardt HA, Degen S, Tadini V, Schilb A, Johns N, Greig CA, Fearon KC, Aebersold R, Jacobi C. Comprehensive proteome analysis of human skeletal muscle in cachexia and sarcopenia: A pilot study. Journal of Cachexia, Sarcopenia and Muscle. PMID 28296247 DOI: 10.1002/Jcsm.12188  1
2017 Wang X, Cimermancic P, Yu C, Schweitzer A, Chopra N, Engel JL, Greenberg CH, Huszagh AS, Beck F, Sakata E, Yang Y, Novitsky EJ, Leitner A, Nanni P, Kahraman A, ... ... Aebersold R, et al. Molecular Details Underlying Dynamic Structures and Regulation of the Human 26S Proteasome. Molecular & Cellular Proteomics : McP. PMID 28292943 DOI: 10.1074/Mcp.M116.065326  1
2017 Zhong Q, Guo T, Rechsteiner M, Rüschoff JH, Rupp N, Fankhauser C, Saba K, Mortezavi A, Poyet C, Hermanns T, Zhu Y, Moch H, Aebersold R, Wild PJ. A curated collection of tissue microarray images and clinical outcome data of prostate cancer patients. Scientific Data. 4: 170014. PMID 28291248 DOI: 10.1038/Sdata.2017.14  1
2017 Nemeth J, Vongrad V, Metzner KJ, Strouvelle V, Weber R, Pedrioli P, Aebersold R, Guenthard H, Collins BC. In vivo and in vitro proteome analysis of HIV-1 infected, human CD4+ T cells. Molecular & Cellular Proteomics : McP. PMID 28223351 DOI: 10.1074/Mcp.M116.065235  1
2017 Röst HL, Aebersold R, Schubert OT. Automated SWATH Data Analysis Using Targeted Extraction of Ion Chromatograms. Methods in Molecular Biology (Clifton, N.J.). 1550: 289-307. PMID 28188537 DOI: 10.1007/978-1-4939-6747-6_20  1
2017 Zolg DP, Wilhelm M, Schnatbaum K, Zerweck J, Knaute T, Delanghe B, Bailey DJ, Gessulat S, Ehrlich HC, Weininger M, Yu P, Schlegl J, Kramer K, Schmidt T, Kusebauch U, ... ... Aebersold R, et al. Building ProteomeTools based on a complete synthetic human proteome. Nature Methods. PMID 28135259 DOI: 10.1038/Nmeth.4153  1
2017 Wei H, Chang H, Zheng L, Lin S, Chen Y, Tian H, Zhao J, Chen Y, Cai H, Gu X, Murugan K. Identification and expression profiling of pheromone biosynthesis activating neuropeptide in Chlumetia transversa (Walker). Pesticide Biochemistry and Physiology. 135: 89-96. PMID 28043337 DOI: 10.1016/j.pestbp.2016.05.005  0.01
2017 Clerici M, Faini M, Aebersold R, Jinek M. Author response: Structural insights into the assembly and polyA signal recognition mechanism of the human CPSF complex Elife. DOI: 10.7554/Elife.33111.025  1
2017 Bensimon A, Zimmer Y, Francica P, Koch JP, Glück AA, Aebersold DM, Aebersold R, Medova M. Abstract A20: The DNA damage-induced phosphoproteome is modulated by inhibition of the MET receptor Clinical Cancer Research. 23. DOI: 10.1158/1557-3265.Pmccavuln16-A20  1
2017 Zhong Q, Guo T, Toussaint N, Wagner U, Charmpi K, Calzone L, Beyer A, Aebersold R, Wild PJ. Abstract 5565: Multi-omic profiling of prostate cancer evolution in 39 patients Cancer Research. 77: 5565-5565. DOI: 10.1158/1538-7445.Am2017-5565  1
2017 Dorn G, Leitner A, Boudet J, Campagne S, Schroetter Cv, Moursy A, Aebersold R, Allain FH-. Mapping protein-RNA interactions with single residue resolution by CLIR-MS/MS Protocol Exchange. DOI: 10.1038/Protex.2017.031  1
2017 Ebhardt H, Root A, Beizaei A, Liu Y, Gauthier N, Sander C, Aebersold R. Systems pharmacology and quantitative proteomics for developing targeted triple therapy European Urology Supplements. 16: e1302-e1303. DOI: 10.1016/S1569-9056(17)30807-2  0.04
2016 Großeholz R, Koh CC, Veith N, Fiedler T, Strauss M, Olivier B, Collins BC, Schubert OT, Bergmann F, Kreikemeyer B, Aebersold R, Kummer U. Integrating highly quantitative proteomics and genome-scale metabolic modeling to study pH adaptation in the human pathogen Enterococcus faecalis. Npj Systems Biology and Applications. 2: 16017. PMID 28725473 DOI: 10.1038/npjsba.2016.17  1
2016 Terfve C, Sabidó E, Wu Y, Gonçalves E, Choi M, Vaga S, Vitek O, Saez-Rodriguez J, Aebersold R. System-wide quantitative proteomics of the metabolic syndrome in mice: genotypic and dietary effects. Journal of Proteome Research. PMID 27936760 DOI: 10.1021/Acs.Jproteome.6B00815  1
2016 Schwörer S, Becker F, Feller C, Baig AH, Köber U, Henze H, Kraus JM, Xin B, Lechel A, Lipka DB, Varghese CS, Schmidt M, Rohs R, Aebersold R, Medina KL, et al. Epigenetic stress responses induce muscle stem-cell ageing by Hoxa9 developmental signals. Nature. PMID 27919074 DOI: 10.1038/Nature20603  1
2016 Ciuffa R, Caron E, Leitner A, Uliana F, Gstaiger M, Aebersold R. Contribution of Mass Spectrometry-Based Proteomics to the Understanding of TNF-α Signaling. Journal of Proteome Research. PMID 27762135 DOI: 10.1021/Acs.Jproteome.6B00728  1
2016 Magliarelli HF, Matondo M, Mészáros G, Goginashvili A, Erbs E, Zhang Z, Mihlan M, Wolfrum C, Aebersold R, Sumara I, Ricci R. Liver ubiquitome uncovers nutrient-stress-mediated trafficking and secretion of complement C3. Cell Death & Disease. 7: e2411. PMID 27735945 DOI: 10.1038/Cddis.2016.312  1
2016 Hauri S, Comoglio F, Seimiya M, Gerstung M, Glatter T, Hansen K, Aebersold R, Paro R, Gstaiger M, Beisel C. A High-Density Map for Navigating the Human Polycomb Complexome. Cell Reports. 17: 583-595. PMID 27705803 DOI: 10.1016/J.Celrep.2016.08.096  1
2016 Navarro P, Kuharev J, Gillet LC, Bernhardt OM, MacLean B, Röst HL, Tate SA, Tsou CC, Reiter L, Distler U, Rosenberger G, Perez-Riverol Y, Nesvizhskii AI, Aebersold R, Tenzer S. A multicenter study benchmarks software tools for label-free proteome quantification. Nature Biotechnology. PMID 27701404 DOI: 10.1038/Nbt.3685  1
2016 Aebersold R, Mann M. Mass-spectrometric exploration of proteome structure and function. Nature. 537: 347-55. PMID 27629641 DOI: 10.1038/Nature19949  1
2016 Okada H, Ebhardt HA, Vonesch SC, Aebersold R, Hafen E. Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster. Nature Communications. 7: 12649. PMID 27582081 DOI: 10.1038/Ncomms12649  1
2016 Röst HL, Sachsenberg T, Aiche S, Bielow C, Weisser H, Aicheler F, Andreotti S, Ehrlich HC, Gutenbrunner P, Kenar E, Liang X, Nahnsen S, Nilse L, Pfeuffer J, Rosenberger G, ... ... Aebersold R, et al. OpenMS: a flexible open-source software platform for mass spectrometry data analysis. Nature Methods. 13: 741-748. PMID 27575624 DOI: 10.1038/Nmeth.3959  1
2016 Van Eyk JE, Corrales FJ, Aebersold R, Cerciello F, Deutsch EW, Roncada P, Sanchez JC, Yamamoto T, Yang P, Zhang H, Omenn GS. Highlights of the Biology and Disease-driven Human Proteome Project, 2015-2016. Journal of Proteome Research. 15: 3979-3987. PMID 27573249 DOI: 10.1021/Acs.Jproteome.6B00444  1
2016 Aebersold R, Bensimon A, Collins BC, Ludwig C, Sabido E. Applications and Developments in Targeted Proteomics: From SRM to DIA/SWATH. Proteomics. 16: 2065-7. PMID 27542680 DOI: 10.1002/Pmic.201600203  1
2016 Nguyen MT, Gabriël S, Abatih EN, Dorny P. A systematic review on the global occurrence of Taenia hydatigena in pigs and cattle. Veterinary Parasitology. 226: 97-103. PMID 27514893 DOI: 10.1016/j.vetpar.2016.06.034  0.01
2016 Deutsch EW, Overall CM, Van Eyk JE, Baker MS, Paik YK, Weintraub ST, Lane L, Martens L, Vandenbrouck Y, Kusebauch U, Hancock WS, Hermjakob H, Aebersold R, Moritz RL, Omenn GS. Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1. Journal of Proteome Research. 15: 3961-3970. PMID 27490519 DOI: 10.1021/Acs.Jproteome.6B00392  1
2016 Röst HL, Liu Y, D'Agostino G, Zanella M, Navarro P, Rosenberger G, Collins BC, Gillet L, Testa G, Malmström L, Aebersold R. TRIC: an automated alignment strategy for reproducible protein quantification in targeted proteomics. Nature Methods. PMID 27479329 DOI: 10.1038/Nmeth.3954  1
2016 M Uumlller DB, Schubert OT, R Oumlst H, Aebersold R, Vorholt JA. Systems-level proteomics of two ubiquitous leaf commensals reveals complementary adaptive traits for phyllosphere colonization. Molecular & Cellular Proteomics : McP. PMID 27457762 DOI: 10.1074/Mcp.M116.058164  1
2016 Kusebauch U, Campbell DS, Deutsch EW, Chu CS, Spicer DA, Brusniak MY, Slagel J, Sun Z, Stevens J, Grimes B, Shteynberg D, Hoopmann MR, Blattmann P, Ratushny AV, Rinner O, ... ... Aebersold R, et al. Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome. Cell. PMID 27453469 DOI: 10.1016/J.Cell.2016.06.041  1
2016 Williams EG, Wu Y, Jha P, Dubuis S, Blattmann P, Argmann CA, Houten SM, Amariuta T, Wolski W, Zamboni N, Aebersold R, Auwerx J. Systems proteomics of liver mitochondria function. Science (New York, N.Y.). 352: aad0189. PMID 27284200 DOI: 10.1126/Science.Aad0189  1
2016 Groner AC, Cato L, de Tribolet-Hardy J, Bernasocchi T, Janouskova H, Melchers D, Houtman R, Cato AC, Tschopp P, Gu L, Corsinotti A, Zhong Q, Fankhauser C, Fritz C, Poyet C, ... ... Aebersold R, et al. TRIM24 Is an Oncogenic Transcriptional Activator in Prostate Cancer. Cancer Cell. PMID 27238081 DOI: 10.1016/J.Ccell.2016.04.012  1
2016 Kim D, Setiaputra D, Jung T, Chung J, Leitner A, Yoon J, Aebersold R, Hebert H, Yip CK, Song JJ. Molecular Architecture of  Yeast Chromatin Assembly Factor 1. Scientific Reports. 6: 26702. PMID 27221973 DOI: 10.1038/Srep26702  1
2016 Zhang H, Ryu D, Wu Y, Gariani K, Wang X, Luan P, D'Amico D, Ropelle ER, Lutolf MP, Aebersold R, Schoonjans K, Menzies KJ, Auwerx J. NAD+ repletion improves mitochondrial and stem cell function and enhances life span in mice. Science (New York, N.Y.). PMID 27127236 DOI: 10.1126/Science.Aaf2693  1
2016 Liu Y, Beyer A, Aebersold R. On the Dependency of Cellular Protein Levels on mRNA Abundance. Cell. 165: 535-50. PMID 27104977 DOI: 10.1016/J.Cell.2016.03.014  1
2016 Shao S, Guo T, Gross V, Lazarev A, Koh CC, Gillessen S, Joerger M, Jochum W, Aebersold R. Reproducible Tissue Homogenization and Protein Extraction for Quantitative Proteomics using MicroPestle-assisted Pressure Cycling Technology. Journal of Proteome Research. PMID 27098501 DOI: 10.1021/Acs.Jproteome.5B01136  1
2016 Faini M, Stengel F, Aebersold R. The Evolving Contribution of Mass Spectrometry to Integrative Structural Biology. Journal of the American Society For Mass Spectrometry. PMID 27056566 DOI: 10.1007/S13361-016-1382-4  1
2016 Blattmann P, Heusel M, Aebersold R. SWATH2stats: An R/Bioconductor Package to Process and Convert Quantitative SWATH-MS Proteomics Data for Downstream Analysis Tools. Plos One. 11: e0153160. PMID 27054327 DOI: 10.1371/Journal.Pone.0153160  1
2016 Gillet LC, Leitner A, Aebersold R. Mass Spectrometry Applied to Bottom-Up Proteomics: Entering the High-Throughput Era for Hypothesis Testing. Annual Review of Analytical Chemistry (Palo Alto, Calif.). PMID 27049628 DOI: 10.1146/Annurev-Anchem-071015-041535  1
2016 Mosadeghi R, Reichermeier KM, Winkler M, Schreiber A, Reitsma JM, Zhang Y, Stengel F, Cao J, Kim M, Sweredoski MJ, Hess S, Leitner A, Aebersold R, Peter M, Deshaies RJ, et al. Structural and kinetic analysis of the COP9-Signalosome activation and the cullin-RING ubiquitin ligase deneddylation cycle. Elife. 5. PMID 27031283 DOI: 10.7554/Elife.12102  1
2016 Vijayvargia R, Epand R, Leitner A, Jung TY, Shin B, Jung R, Lloret A, Singh Atwal R, Lee H, Lee JM, Aebersold R, Hebert H, Song JJ, Seong IS. Huntingtin's spherical solenoid structure enables polyglutamine tract-dependent modulation of its structure and function. Elife. 5. PMID 27003594 DOI: 10.7554/Elife.11184  1
2016 Faridi P, Aebersold R, Caron E. A first dataset toward a standardized community-driven global mapping of the human immunopeptidome. Data in Brief. 7: 201-5. PMID 26958639 DOI: 10.1016/J.Dib.2016.02.016  1
2016 Liu Y, Aebersold R. The interdependence of transcript and protein abundance: new data-new complexities. Molecular Systems Biology. 12: 856. PMID 26792872 DOI: 10.15252/Msb.20156720  1
2016 Mithoe SC, Ludwig C, Pel MJ, Cucinotta M, Casartelli A, Mbengue M, Sklenar J, Derbyshire P, Robatzek S, Pieterse CM, Aebersold R, Menke FL. Attenuation of pattern recognition receptor signaling is mediated by a MAP kinase kinase kinase. Embo Reports. PMID 26769563 DOI: 10.15252/Embr.201540806  1
2016 Hoofnagle AN, Whiteaker JR, Carr SA, Kuhn E, Liu T, Massoni SA, Thomas SN, Townsend RR, Zimmerman LJ, Boja E, Chen J, Crimmins DL, Davies SR, Gao Y, Hiltke TR, ... ... Aebersold R, et al. Recommendations for the Generation, Quantification, Storage, and Handling of Peptides Used for Mass Spectrometry-Based Assays. Clinical Chemistry. 62: 48-69. PMID 26719571 DOI: 10.1373/Clinchem.2015.250563  1
2016 Mosadeghi R, Reichermeier KM, Winkler M, Schreiber A, Reitsma JM, Zhang Y, Stengel F, Cao J, Kim M, Sweredoski MJ, Hess S, Leitner A, Aebersold R, Peter M, Deshaies RJ, et al. Author response: Structural and kinetic analysis of the COP9-Signalosome activation and the cullin-RING ubiquitin ligase deneddylation cycle Elife. DOI: 10.7554/Elife.12102.031  1
2016 Orlando E, Bensimon A, Medovà M, Aebersold D, Aebersold R, Zimmer Y. The role of MET in tumor resistance to radiation therapy: a phosphoproteomic approach European Journal of Cancer. 61: S157. DOI: 10.1016/S0959-8049(16)61555-1  0.01
2016 Faridi P, Aebersold R, Caron E. A first dataset toward a standardized community-driven global mapping of the human immunopeptidome Data in Brief. 7: 201-205. DOI: 10.1016/j.dib.2016.02.016  1
2015 Greber BJ, Gerhardy S, Leitner A, Leibundgut M, Salem M, Boehringer D, Leulliot N, Aebersold R, Panse VG, Ban N. Insertion of the Biogenesis Factor Rei1 Probes the Ribosomal Tunnel during 60S Maturation. Cell. PMID 26709046 DOI: 10.1016/J.Cell.2015.11.027  1
2015 Goh WW, Guo T, Aebersold R, Wong L. Quantitative proteomics signature profiling based on network contextualization. Biology Direct. 10: 71. PMID 26666224 DOI: 10.1186/S13062-015-0098-X  1
2015 Leitner A, Faini M, Stengel F, Aebersold R. Crosslinking and Mass Spectrometry: An Integrated Technology to Understand the Structure and Function of Molecular Machines. Trends in Biochemical Sciences. PMID 26654279 DOI: 10.1016/J.Tibs.2015.10.008  1
2015 Schmidt A, Kochanowski K, Vedelaar S, Ahrné E, Volkmer B, Callipo L, Knoops K, Bauer M, Aebersold R, Heinemann M. The quantitative and condition-dependent Escherichia coli proteome. Nature Biotechnology. PMID 26641532 DOI: 10.1038/Nbt.3418  1
2015 Caron E, Kowalewski DJ, Chiek Koh C, Sturm T, Schuster H, Aebersold R. Analysis of Major Histocompatibility Complex (MHC) Immunopeptidomes Using Mass Spectrometry. Molecular & Cellular Proteomics : McP. 14: 3105-17. PMID 26628741 DOI: 10.1074/Mcp.O115.052431  1
2015 Schubert OT, Aebersold R. Microbial Proteome Profiling and Systems Biology: Applications to Mycobacterium tuberculosis. Advances in Experimental Medicine and Biology. 883: 235-54. PMID 26621471 DOI: 10.1007/978-3-319-23603-2_13  1
2015 Röst HL, Malmström L, Aebersold R. Reproducible quantitative proteotype data matrices for systems biology. Molecular Biology of the Cell. 26: 3926-31. PMID 26543201 DOI: 10.1091/Mbc.E15-07-0507  1
2015 Walzthoeni T, Joachimiak LA, Rosenberger G, Röst HL, Malmström L, Leitner A, Frydman J, Aebersold R. xTract: software for characterizing conformational changes of protein complexes by quantitative cross-linking mass spectrometry. Nature Methods. PMID 26501516 DOI: 10.1038/Nmeth.3631  1
2015 Ciferri C, Chandramouli S, Leitner A, Donnarumma D, Cianfrocco MA, Gerrein R, Friedrich K, Aggarwal Y, Palladino G, Aebersold R, Norais N, Settembre EC, Carfi A. Antigenic Characterization of the HCMV gH/gL/gO and Pentamer Cell Entry Complexes Reveals Binding Sites for Potently Neutralizing Human Antibodies. Plos Pathogens. 11: e1005230. PMID 26485028 DOI: 10.1371/Journal.Ppat.1005230  1
2015 Caron E, Kowalewski DJ, Koh CC, Sturm T, Schuster H, Aebersold R. Analysis of MHC immunopeptidomes using mass spectrometry. Molecular & Cellular Proteomics : McP. PMID 26483422 DOI: 10.1074/mcp.O115.052431  1
2015 Thomas S, Harlan R, Chen J, Aiyetan P, Liu Y, Sokoll LJ, Aebersold R, Chan DW, Zhang H. Multiplexed targeted mass spectrometry-based assays for the quantification of N-linked glycosite-containing peptides in serum. Analytical Chemistry. PMID 26451657 DOI: 10.1021/Acs.Analchem.5B02063  1
2015 Esterhuyse MM, Weiner J, Caron E, Loxton AG, Iannaccone M, Wagman C, Saikali P, Stanley K, Wolski WE, Mollenkopf HJ, Schick M, Aebersold R, Linhart H, Walzl G, Kaufmann SH. Epigenetics and Proteomics Join Transcriptomics in the Quest for Tuberculosis Biomarkers. Mbio. 6. PMID 26374119 DOI: 10.1128/Mbio.01187-15  1
2015 Shao S, Guo T, Koh CC, Gillessen S, Joerger M, Jochum W, Aebersold R. Minimal sample requirement for highly multiplexed protein quantification in cell lines and tissues by PCT-SWATH mass spectrometry. Proteomics. PMID 26287124 DOI: 10.1002/Pmic.201500161  1
2015 Chen L, Li J, Guo T, Ghosh S, Koh SK, Tian D, Zhang L, Jia D, Beuerman RW, Aebersold R, Chan EC, Zhou L. Global Metabonomic and Proteomic Analysis of Human Conjunctival Epithelial Cells (IOBA-NHC) in Response to Hyperosmotic Stress. Journal of Proteome Research. PMID 26260330 DOI: 10.1021/Acs.Jproteome.5B00443  1
2015 Surinova S, Choi M, Tao S, Schüffler PJ, Chang CY, Clough T, Vysloužil K, Khoylou M, Srovnal J, Liu Y, Matondo M, Hüttenhain R, Weisser H, Buhmann JM, Hajdúch M, ... ... Aebersold R, et al. Prediction of colorectal cancer diagnosis based on circulating plasma proteins. Embo Molecular Medicine. PMID 26253081 DOI: 10.15252/Emmm.201404873  1
2015 Surinova S, Radová L, Choi M, Srovnal J, Brenner H, Vitek O, Hajdúch M, Aebersold R. Non-invasive prognostic protein biomarker signatures associated with colorectal cancer. Embo Molecular Medicine. 7: 1153-65. PMID 26253080 DOI: 10.15252/Emmm.201404874  1
2015 Nillegoda NB, Kirstein J, Szlachcic A, Berynskyy M, Stank A, Stengel F, Arnsburg K, Gao X, Scior A, Aebersold R, Guilbride DL, Wade RC, Morimoto RI, Mayer MP, Bukau B. Crucial HSP70 co-chaperone complex unlocks metazoan protein disaggregation. Nature. 524: 247-51. PMID 26245380 DOI: 10.1038/Nature14884  1
2015 Subasic D, Brümmer A, Wu Y, Pinto SM, Imig J, Keller M, Jovanovic M, Lightfoot HL, Nasso S, Götze S, Brunner E, Hall J, Aebersold R, Zavolan M, Hengartner M. Cooperative target mRNA destabilization and translation inhibition by miR-58 microRNA family in C. elegans. Genome Research. PMID 26232411 DOI: 10.1101/Gr.183160.114  1
2015 Ting YS, Egertson JD, Payne SH, Kim S, MacLean B, Käll L, Aebersold RH, Smith RD, Noble WS, MacCoss MJ. Peptide-Centric Proteome Analysis: An Alternative Strategy for the Analysis of Tandem Mass Spectrometry Data. Molecular & Cellular Proteomics : McP. PMID 26217018 DOI: 10.1074/Mcp.O114.047035  0.44
2015 Parker SJ, Rost H, Rosenberger G, Collins BC, Malmström L, Amodei D, Venkatraman V, Raedschelders K, Van Eyk JE, Aebersold R. Identification of a Set of Conserved Eukaryotic Internal Retention Time Standards for Data-independent Acquisition Mass Spectrometry. Molecular & Cellular Proteomics : McP. 14: 2800-13. PMID 26199342 DOI: 10.1074/Mcp.O114.042267  1
2015 Caron E, Espona L, Kowalewski DJ, Schuster H, Ternette N, Alpízar A, Schittenhelm RB, Ramarathinam SH, Lindestam Arlehamn CS, Chiek Koh C, Gillet LC, Rabsteyn A, Navarro P, Kim S, Lam H, ... ... Aebersold R, et al. An open-source computational and data resource to analyze digital maps of immunopeptidomes. Elife. 4. PMID 26154972 DOI: 10.7554/Elife.07661  1
2015 Marcon E, Jain H, Bhattacharya A, Guo H, Phanse S, Pu S, Byram G, Collins BC, Dowdell E, Fenner M, Guo X, Hutchinson A, Kennedy JJ, Krastins B, Larsen B, ... ... Aebersold R, et al. Assessment of a method to characterize antibody selectivity and specificity for use in immunoprecipitation. Nature Methods. PMID 26121405 DOI: 10.1038/Nmeth.3472  1
2015 Ebhardt HA, Root A, Sander C, Aebersold R. Applications of targeted proteomics in systems biology and translational medicine. Proteomics. PMID 26097198 DOI: 10.1002/Pmic.201500004  1
2015 Schubert OT, Ludwig C, Kogadeeva M, Zimmermann M, Rosenberger G, Gengenbacher M, Gillet LC, Collins BC, Röst HL, Kaufmann SH, Sauer U, Aebersold R. Absolute Proteome Composition and Dynamics during Dormancy and Resuscitation of Mycobacterium tuberculosis. Cell Host & Microbe. 18: 96-108. PMID 26094805 DOI: 10.1016/J.Chom.2015.06.001  1
2015 Hofmann A, Thiesler T, Gerrits B, Behnke S, Sobotzki N, Omasits U, Bausch-Fluck D, Bock T, Aebersold R, Moch H, Tinguely M, Wollscheid B. Surfaceome of classical Hodgkin and non-Hodgkin lymphoma. Proteomics. Clinical Applications. PMID 26076441 DOI: 10.1002/Prca.201400146  1
2015 Gaubitz C, Oliveira TM, Prouteau M, Leitner A, Karuppasamy M, Konstantinidou G, Rispal D, Eltschinger S, Robinson GC, Thore S, Aebersold R, Schaffitzel C, Loewith R. Molecular Basis of the Rapamycin Insensitivity of Target Of Rapamycin Complex 2. Molecular Cell. 58: 977-88. PMID 26028537 DOI: 10.1016/J.Molcel.2015.04.031  1
2015 Sjöström M, Ossola R, Breslin T, Rinner O, Malmström L, Schmidt A, Aebersold R, Malmström J, Niméus E. A Combined Shotgun and Targeted Mass Spectrometry Strategy for Breast Cancer Biomarker Discovery. Journal of Proteome Research. PMID 25944384 DOI: 10.1021/Acs.Jproteome.5B00315  1
2015 Röst HL, Schmitt U, Aebersold R, Malmström L. Fast and Efficient XML Data Access for Next-Generation Mass Spectrometry. Plos One. 10: e0125108. PMID 25927999 DOI: 10.1371/Journal.Pone.0125108  1
2015 Oliveira AP, Ludwig C, Zampieri M, Weisser H, Aebersold R, Sauer U. Dynamic phosphoproteomics reveals TORC1-dependent regulation of yeast nucleotide and amino acid biosynthesis. Science Signaling. 8: rs4. PMID 25921291 DOI: 10.1126/Scisignal.2005768  1
2015 Bausch-Fluck D, Hofmann A, Bock T, Frei AP, Cerciello F, Jacobs A, Moest H, Omasits U, Gundry RL, Yoon C, Schiess R, Schmidt A, Mirkowska P, Härtlová A, Van Eyk JE, ... ... Aebersold R, et al. A mass spectrometric-derived cell surface protein atlas. Plos One. 10: e0121314. PMID 25894527 DOI: 10.1371/Journal.Pone.0121314  1
2015 Oliveira AP, Dimopoulos S, Busetto AG, Christen S, Dechant R, Falter L, Haghir Chehreghani M, Jozefczuk S, Ludwig C, Rudroff F, Schulz JC, González A, Soulard A, Stracka D, Aebersold R, et al. Inferring causal metabolic signals that regulate the dynamic TORC1-dependent transcriptome. Molecular Systems Biology. 11: 802. PMID 25888284 DOI: 10.15252/Msb.20145475  1
2015 Rispal D, Eltschinger S, Stahl M, Vaga S, Bodenmiller B, Abraham Y, Filipuzzi I, Movva NR, Aebersold R, Helliwell SB, Loewith R. Target of Rapamycin Complex 2 Regulates Actin Polarization and Endocytosis via Multiple Pathways. The Journal of Biological Chemistry. 290: 14963-78. PMID 25882841 DOI: 10.1074/Jbc.M114.627794  1
2015 Greber BJ, Bieri P, Leibundgut M, Leitner A, Aebersold R, Boehringer D, Ban N. Ribosome. The complete structure of the 55S mammalian mitochondrial ribosome. Science (New York, N.Y.). 348: 303-8. PMID 25837512 DOI: 10.1126/Science.Aaa3872  1
2015 Röst HL, Rosenberger G, Aebersold R, Malmström L. Efficient visualization of high-throughput targeted proteomics experiments: TAPIR. Bioinformatics (Oxford, England). 31: 2415-7. PMID 25788625 DOI: 10.1093/Bioinformatics/Btv152  1
2015 Suni V, Imanishi SY, Maiolica A, Aebersold R, Corthals GL. Confident site localization using a simulated phosphopeptide spectral library. Journal of Proteome Research. 14: 2348-59. PMID 25774671 DOI: 10.1021/Acs.Jproteome.5B00050  1
2015 Guo T, Kouvonen P, Koh CC, Gillet LC, Wolski WE, Röst HL, Rosenberger G, Collins BC, Blum LC, Gillessen S, Joerger M, Jochum W, Aebersold R. Rapid mass spectrometric conversion of tissue biopsy samples into permanent quantitative digital proteome maps. Nature Medicine. 21: 407-13. PMID 25730263 DOI: 10.1038/Nm.3807  1
2015 Schubert OT, Gillet LC, Collins BC, Navarro P, Rosenberger G, Wolski WE, Lam H, Amodei D, Mallick P, MacLean B, Aebersold R. Building high-quality assay libraries for targeted analysis of SWATH MS data. Nature Protocols. 10: 426-41. PMID 25675208 DOI: 10.1038/Nprot.2015.015  1
2015 Liu Y, Buil A, Collins BC, Gillet LC, Blum LC, Cheng LY, Vitek O, Mouritsen J, Lachance G, Spector TD, Dermitzakis ET, Aebersold R. Quantitative variability of 342 plasma proteins in a human twin population. Molecular Systems Biology. 11: 786. PMID 25652787 DOI: 10.15252/Msb.20145728  1
2015 Brigo F, Igwe SC, Ausserer H, Nardone R, Tezzon F, Bongiovanni LG, Tinazzi M, Trinka E. Terminology of psychogenic nonepileptic seizures. Epilepsia. 56: e21-5. PMID 25631657 DOI: 10.1111/epi.12911  0.01
2015 Gatti M, Pinato S, Maiolica A, Rocchio F, Prato MG, Aebersold R, Penengo L. RNF168 promotes noncanonical K27 ubiquitination to signal DNA damage. Cell Reports. 10: 226-38. PMID 25578731 DOI: 10.1016/J.Celrep.2014.12.021  1
2015 Selevsek N, Chang CY, Gillet LC, Navarro P, Bernhardt OM, Reiter L, Cheng LY, Vitek O, Aebersold R. Reproducible and consistent quantification of the Saccharomyces cerevisiae proteome by SWATH-mass spectrometry. Molecular & Cellular Proteomics : McP. 14: 739-49. PMID 25561506 DOI: 10.1074/Mcp.M113.035550  1
2015 Shao S, Guo T, Aebersold R. Mass spectrometry-based proteomic quest for diabetes biomarkers. Biochimica Et Biophysica Acta. 1854: 519-527. PMID 25556002 DOI: 10.1016/J.Bbapap.2014.12.012  1
2015 Deroo S, Stengel F, Mohammadi A, Henry N, Hubin E, Krammer EM, Aebersold R, Raussens V. Chemical cross-linking/mass spectrometry maps the amyloid β peptide binding region on both apolipoprotein E domains. Acs Chemical Biology. 10: 1010-6. PMID 25546376 DOI: 10.1021/cb500994j  1
2015 Bouyssié D, Dubois M, Nasso S, Gonzalez de Peredo A, Burlet-Schiltz O, Aebersold R, Monsarrat B. mzDB: a file format using multiple indexing strategies for the efficient analysis of large LC-MS/MS and SWATH-MS data sets. Molecular & Cellular Proteomics : McP. 14: 771-81. PMID 25505153 DOI: 10.1074/Mcp.O114.039115  1
2015 Sajic T, Liu Y, Aebersold R. Using data-independent, high-resolution mass spectrometry in protein biomarker research: perspectives and clinical applications. Proteomics. Clinical Applications. 9: 307-21. PMID 25504613 DOI: 10.1002/Prca.201400117  1
2015 Lebert D, Louwagie M, Goetze S, Picard G, Ossola R, Duquesne C, Basler K, Ferro M, Rinner O, Aebersold R, Garin J, Mouz N, Brunner E, Brun V. DIGESTIF: a universal quality standard for the control of bottom-up proteomics experiments. Journal of Proteome Research. 14: 787-803. PMID 25495225 DOI: 10.1021/Pr500834Z  1
2015 Efremov RG, Leitner A, Aebersold R, Raunser S. Architecture and conformational switch mechanism of the ryanodine receptor. Nature. 517: 39-43. PMID 25470059 DOI: 10.1038/Nature13916  1
2015 Kuilman T, Maiolica A, Godfrey M, Scheidel N, Aebersold R, Uhlmann F. Identification of Cdk targets that control cytokinesis. The Embo Journal. 34: 81-96. PMID 25371407 DOI: 10.15252/Embj.201488958  1
2015 Heikkinen AT, Friedlein A, Matondo M, Hatley OJ, Petsalo A, Juvonen R, Galetin A, Rostami-Hodjegan A, Aebersold R, Lamerz J, Dunkley T, Cutler P, Parrott N. Quantitative ADME proteomics - CYP and UGT enzymes in the Beagle dog liver and intestine. Pharmaceutical Research. 32: 74-90. PMID 25033762 DOI: 10.1007/S11095-014-1446-8  1
2015 Vijayvargia R, Epand R, Leitner A, Jung T, Shin B, Jung R, Lloret A, Atwal RS, Lee H, Lee J, Aebersold R, Hebert H, Song J, Seong IS. Author response: Huntingtin’s spherical solenoid structure enables polyglutamine tract-dependent modulation of its structure and function Elife. DOI: 10.7554/Elife.11184.018  1
2015 Caron E, Espona L, Kowalewski DJ, Schuster H, Ternette N, Alpízar A, Schittenhelm RB, Ramarathinam SH, Arlehamn CSL, Koh CC, Gillet LC, Rabsteyn A, Navarro P, Kim S, Lam H, ... ... Aebersold R, et al. Author response: An open-source computational and data resource to analyze digital maps of immunopeptidomes Elife. DOI: 10.7554/Elife.07661.032  1
2015 Cheng L, Liu Y, Chang C, Röst H, Aebersold R, Vitek O. Statistical elimination of spectral features with large between-run variation enhances quantitative protein-level conclusions in experiments with data-independent spectral acquisition Bmc Bioinformatics. 16. DOI: 10.1186/1471-2105-16-S2-A4  0.01
2015 Caron E, Kowalewski DJ, Koh CC, Sturm T, Schuster H, Aebersold R. Analysis of major histocompatibility complex (MHC) immunopeptidomes using mass spectrometry Molecular and Cellular Proteomics. 14: 3105-3117. DOI: 10.1074/mcp.M0115.052431  1
2014 Erzberger JP, Stengel F, Pellarin R, Zhang S, Schaefer T, Aylett CHS, Cimermančič P, Boehringer D, Sali A, Aebersold R, Ban N. Molecular Architecture of the 40S⋅eIF1⋅eIF3 Translation Initiation Complex. Cell. 159: 1227-1228. PMID 28898626 DOI: 10.1016/J.Cell.2014.11.001  1
2014 Gengenbacher M, Mouritsen J, Schubert OT, Aebersold R, Kaufmann SH. Mycobacterium tuberculosis in the Proteomics Era. Microbiology Spectrum. 2. PMID 26105825 DOI: 10.1128/Microbiolspec.Mgm2-0020-2013  1
2014 Rosenberger G, Koh CC, Guo T, Röst HL, Kouvonen P, Collins BC, Heusel M, Liu Y, Caron E, Vichalkovski A, Faini M, Schubert OT, Faridi P, Ebhardt HA, Matondo M, ... ... Aebersold R, et al. A repository of assays to quantify 10,000 human proteins by SWATH-MS. Scientific Data. 1: 140031. PMID 25977788 DOI: 10.1038/Sdata.2014.31  1
2014 Vaga S, Bernardo-Faura M, Cokelaer T, Maiolica A, Barnes CA, Gillet LC, Hegemann B, van Drogen F, Sharifian H, Klipp E, Peter M, Saez-Rodriguez J, Aebersold R. Phosphoproteomic analyses reveal novel cross-modulation mechanisms between two signaling pathways in yeast. Molecular Systems Biology. 10: 767. PMID 25492886 DOI: 10.15252/Msb.20145112  1
2014 Gubin MM, Zhang X, Schuster H, Caron E, Ward JP, Noguchi T, Ivanova Y, Hundal J, Arthur CD, Krebber WJ, Mulder GE, Toebes M, Vesely MD, Lam SS, Korman AJ, ... ... Aebersold R, et al. Checkpoint blockade cancer immunotherapy targets tumour-specific mutant antigens. Nature. 515: 577-81. PMID 25428507 DOI: 10.1038/Nature13988  1
2014 Joachimiak LA, Walzthoeni T, Liu CW, Aebersold R, Frydman J. The structural basis of substrate recognition by the eukaryotic chaperonin TRiC/CCT. Cell. 159: 1042-55. PMID 25416944 DOI: 10.1016/J.Cell.2014.10.042  1
2014 Huis in 't Veld PJ, Herzog F, Ladurner R, Davidson IF, Piric S, Kreidl E, Bhaskara V, Aebersold R, Peters JM. Characterization of a DNA exit gate in the human cohesin ring. Science (New York, N.Y.). 346: 968-72. PMID 25414306 DOI: 10.1126/Science.1256904  1
2014 Ebhardt HA, Nan J, Chaulk SG, Fahlman RP, Aebersold R. Enzymatic generation of peptides flanked by basic amino acids to obtain MS/MS spectra with 2× sequence coverage. Rapid Communications in Mass Spectrometry : Rcm. 28: 2735-43. PMID 25380496 DOI: 10.1002/Rcm.7069  1
2014 Greber BJ, Boehringer D, Leibundgut M, Bieri P, Leitner A, Schmitz N, Aebersold R, Ban N. The complete structure of the large subunit of the mammalian mitochondrial ribosome. Nature. 515: 283-6. PMID 25271403 DOI: 10.1038/Nature13895  1
2014 Wu Y, Williams EG, Dubuis S, Mottis A, Jovaisaite V, Houten SM, Argmann CA, Faridi P, Wolski W, Kutalik Z, Zamboni N, Auwerx J, Aebersold R. Multilayered genetic and omics dissection of mitochondrial activity in a mouse reference population. Cell. 158: 1415-30. PMID 25215496 DOI: 10.1016/J.Cell.2014.07.039  1
2014 Erzberger JP, Stengel F, Pellarin R, Zhang S, Schaefer T, Aylett CH, Cimermančič P, Boehringer D, Sali A, Aebersold R, Ban N. Molecular architecture of the 40Sâ‹…eIF1â‹…eIF3 translation initiation complex. Cell. 158: 1123-35. PMID 25171412 DOI: 10.1016/J.Cell.2014.07.044  1
2014 Birol M, Enchev RI, Padilla A, Stengel F, Aebersold R, Betzi S, Yang Y, Hoh F, Peter M, Dumas C, Echalier A. Structural and biochemical characterization of the Cop9 signalosome CSN5/CSN6 heterodimer. Plos One. 9: e105688. PMID 25144743 DOI: 10.1371/Journal.Pone.0105688  1
2014 Greco V, Pieragostino D, Piras C, Aebersold R, Wiltfang J, Caltagirone C, Bernardini S, Urbani A. Direct analytical sample quality assessment for biomarker investigation: qualifying cerebrospinal fluid samples. Proteomics. 14: 1954-62. PMID 25044759 DOI: 10.1002/Pmic.201300565  1
2014 Braun KA, Vaga S, Dombek KM, Fang F, Palmisano S, Aebersold R, Young ET. Phosphoproteomic analysis identifies proteins involved in transcription-coupled mRNA decay as targets of Snf1 signaling. Science Signaling. 7: ra64. PMID 25005228 DOI: 10.1126/Scisignal.2005000  1
2014 Fengos G, Schmidt A, Martin K, Fluri E, Aebersold R, Iber D, Pertz O. Spatial proteomic and phospho-proteomic organization in three prototypical cell migration modes. Proteome Science. 12: 23. PMID 24987309 DOI: 10.1186/1477-5956-12-23  1
2014 Raijmakers R, Olsen JV, Aebersold R, Heck AJ. PRIME-XS, a European infrastructure for proteomics. Molecular & Cellular Proteomics : McP. 13: 1901-4. PMID 24958170 DOI: 10.1074/Mcp.E114.040162  1
2014 Leitner A, Joachimiak LA, Unverdorben P, Walzthoeni T, Frydman J, Förster F, Aebersold R. Chemical cross-linking/mass spectrometry targeting acidic residues in proteins and protein complexes. Proceedings of the National Academy of Sciences of the United States of America. 111: 9455-60. PMID 24938783 DOI: 10.1073/Pnas.1320298111  1
2014 Goldman A, Roy J, Bodenmiller B, Wanka S, Landry CR, Aebersold R, Cyert MS. The calcineurin signaling network evolves via conserved kinase-phosphatase modules that transcend substrate identity. Molecular Cell. 55: 422-35. PMID 24930733 DOI: 10.1016/J.Molcel.2014.05.012  1
2014 Jünger MA, Aebersold R. Mass spectrometry-driven phosphoproteomics: patterning the systems biology mosaic. Wiley Interdisciplinary Reviews. Developmental Biology. 3: 83-112. PMID 24902836 DOI: 10.1002/Wdev.121  1
2014 Walzer M, Pernas LE, Nasso S, Bittremieux W, Nahnsen S, Kelchtermans P, Pichler P, van den Toorn HW, Staes A, Vandenbussche J, Mazanek M, Taus T, Scheltema RA, Kelstrup CD, Gatto L, ... ... Aebersold R, et al. qcML: an exchange format for quality control metrics from mass spectrometry experiments. Molecular & Cellular Proteomics : McP. 13: 1905-13. PMID 24760958 DOI: 10.1074/Mcp.M113.035907  1
2014 Rosenberger G, Ludwig C, Röst HL, Aebersold R, Malmström L. aLFQ: an R-package for estimating absolute protein quantities from label-free LC-MS/MS proteomics data. Bioinformatics (Oxford, England). 30: 2511-3. PMID 24753486 DOI: 10.1093/Bioinformatics/Btu200  1
2014 Liu Y, Chen J, Sethi A, Li QK, Chen L, Collins B, Gillet LC, Wollscheid B, Zhang H, Aebersold R. Glycoproteomic analysis of prostate cancer tissues by SWATH mass spectrometry discovers N-acylethanolamine acid amidase and protein tyrosine kinase 7 as signatures for tumor aggressiveness. Molecular & Cellular Proteomics : McP. 13: 1753-68. PMID 24741114 DOI: 10.1074/Mcp.M114.038273  1
2014 Maiolica A, de Medina-Redondo M, Schoof EM, Chaikuad A, Villa F, Gatti M, Jeganathan S, Lou HJ, Novy K, Hauri S, Toprak UH, Herzog F, Meraldi P, Penengo L, Turk BE, ... ... Aebersold R, et al. Modulation of the chromatin phosphoproteome by the Haspin protein kinase. Molecular & Cellular Proteomics : McP. 13: 1724-40. PMID 24732914 DOI: 10.1074/Mcp.M113.034819  0.01
2014 Röst HL, Rosenberger G, Navarro P, Gillet L, Miladinović SM, Schubert OT, Wolski W, Collins BC, Malmström J, Malmström L, Aebersold R. OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data. Nature Biotechnology. 32: 219-23. PMID 24727770 DOI: 10.1038/Nbt.2841  1
2014 Toprak UH, Gillet LC, Maiolica A, Navarro P, Leitner A, Aebersold R. Conserved peptide fragmentation as a benchmarking tool for mass spectrometers and a discriminating feature for targeted proteomics. Molecular & Cellular Proteomics : McP. 13: 2056-71. PMID 24623587 DOI: 10.1074/Mcp.O113.036475  1
2014 Aebersold R, Bader GD, Edwards AM, van Eyk J, Kussman M, Qin J, Omenn GS. Highlights of B/D-HPP and HPP Resource Pillar Workshops at 12th Annual HUPO World Congress of Proteomics: September 14-18, 2013, Yokohama, Japan. Proteomics. 14: 975-88. PMID 24596128 DOI: 10.1002/Pmic.201400041  1
2014 Roncagalli R, Hauri S, Fiore F, Liang Y, Chen Z, Sansoni A, Kanduri K, Joly R, Malzac A, Lähdesmäki H, Lahesmaa R, Yamasaki S, Saito T, Malissen M, Aebersold R, et al. Quantitative proteomics analysis of signalosome dynamics in primary T cells identifies the surface receptor CD6 as a Lat adaptor-independent TCR signaling hub. Nature Immunology. 15: 384-92. PMID 24584089 DOI: 10.1038/Ni.2843  1
2014 Politis A, Stengel F, Hall Z, Hernández H, Leitner A, Walzthoeni T, Robinson CV, Aebersold R. A mass spectrometry-based hybrid method for structural modeling of protein complexes. Nature Methods. 11: 403-6. PMID 24509631 DOI: 10.1038/Nmeth.2841  1
2014 Carr SA, Abbatiello SE, Ackermann BL, Borchers C, Domon B, Deutsch EW, Grant RP, Hoofnagle AN, Hüttenhain R, Koomen JM, Liebler DC, Liu T, MacLean B, Mani DR, Mansfield E, ... ... Aebersold R, et al. Targeted peptide measurements in biology and medicine: best practices for mass spectrometry-based assay development using a fit-for-purpose approach. Molecular & Cellular Proteomics : McP. 13: 907-17. PMID 24443746 DOI: 10.1074/Mcp.M113.036095  1
2014 Chang CY, Sabidó E, Aebersold R, Vitek O. Targeted protein quantification using sparse reference labeling. Nature Methods. 11: 301-4. PMID 24441934 DOI: 10.1038/Nmeth.2806  1
2014 Papinski D, Schuschnig M, Reiter W, Wilhelm L, Barnes CA, Maiolica A, Hansmann I, Pfaffenwimmer T, Kijanska M, Stoffel I, Lee SS, Brezovich A, Lou JH, Turk BE, Aebersold R, et al. Early steps in autophagy depend on direct phosphorylation of Atg9 by the Atg1 kinase. Molecular Cell. 53: 471-83. PMID 24440502 DOI: 10.1016/J.Molcel.2013.12.011  1
2014 Röst HL, Schmitt U, Aebersold R, Malmström L. pyOpenMS: a Python-based interface to the OpenMS mass-spectrometry algorithm library. Proteomics. 14: 74-7. PMID 24420968 DOI: 10.1002/Pmic.201300246  1
2014 Greber BJ, Boehringer D, Leitner A, Bieri P, Voigts-Hoffmann F, Erzberger JP, Leibundgut M, Aebersold R, Ban N. Architecture of the large subunit of the mammalian mitochondrial ribosome. Nature. 505: 515-9. PMID 24362565 DOI: 10.1038/Nature12890  1
2014 Leitner A, Walzthoeni T, Aebersold R. Lysine-specific chemical cross-linking of protein complexes and identification of cross-linking sites using LC-MS/MS and the xQuest/xProphet software pipeline. Nature Protocols. 9: 120-37. PMID 24356771 DOI: 10.1038/Nprot.2013.168  1
2014 Kiel C, Ebhardt HA, Burnier J, Portugal C, Sabidó E, Zimmermann T, Aebersold R, Serrano L. Quantification of ErbB network proteins in three cell types using complementary approaches identifies cell-general and cell-type-specific signaling proteins. Journal of Proteome Research. 13: 300-13. PMID 24313378 DOI: 10.1021/Pr400878X  1
2014 Gerster S, Kwon T, Ludwig C, Matondo M, Vogel C, Marcotte EM, Aebersold R, Bühlmann P. Statistical approach to protein quantification. Molecular & Cellular Proteomics : McP. 13: 666-77. PMID 24255132 DOI: 10.1074/Mcp.M112.025445  1
2014 Vialas V, Sun Z, Loureiro y Penha CV, Carrascal M, Abián J, Monteoliva L, Deutsch EW, Aebersold R, Moritz RL, Gil C. A Candida albicans PeptideAtlas. Journal of Proteomics. 97: 62-8. PMID 23811049 DOI: 10.1016/J.Jprot.2013.06.020  1
2014 Thaminy S, Blaser H, Clough T, Zhou Y, Snijder B, Chang C, Sheu C, Yu D, Pelkmans L, Mak T, Watts J, Vitek O, Aebersold R. Integrated-omics analysis uncovers a fundamental hypoxia-driven mechanism of breast cancer progression F1000research. 5. DOI: 10.7490/F1000Research.1096216.1  1
2014 Kalliomäki M, Kouvonen P, Koh C, Collins B, Malmström L, Aebersold R. P-003: Detection of bacterial and host proteins from a single colonic biopsy sample by a new mass spectrometry-based assay in pediatric ulcerative colitis Journal of Crohn's and Colitis. 8: S395. DOI: 10.1016/S1873-9946(14)50007-4  0.01
2014 Gaubitz C, Oliveira TM, Prouteau M, Leitner A, Karuppasamy M, Konstantinidou G, Rispal D, Eltschinger S, Robinson GC, Thore S, Aebersold R, Schaffitzel C, Loewith R. Molecular Basis of the Rapamycin Insensitivity of Target Of Rapamycin Complex 2 Molecular Cell. DOI: 10.1016/j.molcel.2015.04.031  1
2014 Quandt A, Espona L, Balasko A, Weisser H, Brusniak MY, Kunszt P, Aebersold R, Malmström L. Using synthetic peptides to benchmark peptide identification software and search parameters for MS/MS data analysis Eupa Open Proteomics. 5: 21-31. DOI: 10.1016/J.Euprot.2014.10.001  1
2014 Cortes T, Schubert O, Rose G, Arnvig K, Comas I, Aebersold R, Young D. Genome-wide Mapping of Transcriptional Start Sites Defines an Extensive Leaderless Transcriptome in. Cell Reports. 6: 415-415. DOI: 10.1016/J.Celrep.2014.01.004  1
2013 Hauri S, Wepf A, van Drogen A, Varjosalo M, Tapon N, Aebersold R, Gstaiger M. Interaction proteome of human Hippo signaling: modular control of the co-activator YAP1. Molecular Systems Biology. 9: 713. PMID 24366813 DOI: 10.1002/Msb.201304750  1
2013 Houghton J, Cortes T, Schubert O, Rose G, Rodgers A, De Ste Croix M, Aebersold R, Young DB, Arnvig KB. A small RNA encoded in the Rv2660c locus of Mycobacterium tuberculosis is induced during starvation and infection. Plos One. 8: e80047. PMID 24348997 DOI: 10.1371/journal.pone.0080047  1
2013 Cheng H, Hong W, Wang X, Hu X. Diffusion tensor imaging findings associated with cognitive performance in hydrocephalus patients. Saudi Medical Journal. 34: 1299-301. PMID 24343473  0.01
2013 Meena S, Singla A, Chowdhury B. Making advanced trauma life support more effective. Saudi Medical Journal. 34: 1121-2. PMID 24343460  0.01
2013 Hausser J, Syed AP, Selevsek N, van Nimwegen E, Jaskiewicz L, Aebersold R, Zavolan M. Timescales and bottlenecks in miRNA-dependent gene regulation. Molecular Systems Biology. 9: 711. PMID 24301800 DOI: 10.1038/Msb.2013.68  1
2013 Cortes T, Schubert OT, Rose G, Arnvig KB, Comas I, Aebersold R, Young DB. Genome-wide mapping of transcriptional start sites defines an extensive leaderless transcriptome in Mycobacterium tuberculosis. Cell Reports. 5: 1121-31. PMID 24268774 DOI: 10.1016/J.Celrep.2013.10.031  1
2013 Cerciello F, Choi M, Nicastri A, Bausch-Fluck D, Ziegler A, Vitek O, Felley-Bosco E, Stahel R, Aebersold R, Wollscheid B. Identification of a seven glycopeptide signature for malignant pleural mesothelioma in human serum by selected reaction monitoring. Clinical Proteomics. 10: 16. PMID 24207061 DOI: 10.1186/1559-0275-10-16  1
2013 Collins BC, Gillet LC, Rosenberger G, Röst HL, Vichalkovski A, Gstaiger M, Aebersold R. Quantifying protein interaction dynamics by SWATH mass spectrometry: application to the 14-3-3 system. Nature Methods. 10: 1246-53. PMID 24162925 DOI: 10.1038/Nmeth.2703  1
2013 Lambert JP, Ivosev G, Couzens AL, Larsen B, Taipale M, Lin ZY, Zhong Q, Lindquist S, Vidal M, Aebersold R, Pawson T, Bonner R, Tate S, Gingras AC. Mapping differential interactomes by affinity purification coupled with data-independent mass spectrometry acquisition. Nature Methods. 10: 1239-45. PMID 24162924 DOI: 10.1038/Nmeth.2702  1
2013 Liu Y, Hüttenhain R, Collins B, Aebersold R. Mass spectrometric protein maps for biomarker discovery and clinical research. Expert Review of Molecular Diagnostics. 13: 811-25. PMID 24138574 DOI: 10.1586/14737159.2013.845089  1
2013 Kahraman A, Herzog F, Leitner A, Rosenberger G, Aebersold R, Malmström L. Cross-link guided molecular modeling with ROSETTA. Plos One. 8: e73411. PMID 24069194 DOI: 10.1371/Journal.Pone.0073411  1
2013 Pfaff J, Hennig J, Herzog F, Aebersold R, Sattler M, Niessing D, Meister G. Structural features of Argonaute-GW182 protein interactions. Proceedings of the National Academy of Sciences of the United States of America. 110: E3770-9. PMID 24043833 DOI: 10.1073/Pnas.1308510110  1
2013 Nguyen VQ, Ranjan A, Stengel F, Wei D, Aebersold R, Wu C, Leschziner AE. Molecular architecture of the ATP-dependent chromatin-remodeling complex SWR1. Cell. 154: 1220-31. PMID 24034246 DOI: 10.1016/J.Cell.2013.08.018  1
2013 Tosi A, Haas C, Herzog F, Gilmozzi A, Berninghausen O, Ungewickell C, Gerhold CB, Lakomek K, Aebersold R, Beckmann R, Hopfner KP. Structure and subunit topology of the INO80 chromatin remodeler and its nucleosome complex. Cell. 154: 1207-19. PMID 24034245 DOI: 10.1016/J.Cell.2013.08.016  1
2013 Mellacheruvu D, Wright Z, Couzens AL, Lambert JP, St-Denis NA, Li T, Miteva YV, Hauri S, Sardiu ME, Low TY, Halim VA, Bagshaw RD, Hubner NC, Al-Hakim A, Bouchard A, ... ... Aebersold R, et al. The CRAPome: a contaminant repository for affinity purification-mass spectrometry data. Nature Methods. 10: 730-6. PMID 23921808 DOI: 10.1038/Nmeth.2557  1
2013 Surinova S, Hüttenhain R, Chang CY, Espona L, Vitek O, Aebersold R. Automated selected reaction monitoring data analysis workflow for large-scale targeted proteomic studies. Nature Protocols. 8: 1602-19. PMID 23887179 DOI: 10.1038/Nprot.2013.091  1
2013 Sabidó E, Wu Y, Bautista L, Porstmann T, Chang CY, Vitek O, Stoffel M, Aebersold R. Targeted proteomics reveals strain-specific changes in the mouse insulin and central metabolic pathways after a sustained high-fat diet. Molecular Systems Biology. 9: 681. PMID 23860498 DOI: 10.1038/Msb.2013.36  1
2013 Leitner A, Aebersold R. SnapShot: mass spectrometry for protein and proteome analyses. Cell. 154: 252-252.e1. PMID 23827686 DOI: 10.1016/J.Cell.2013.06.025  1
2013 Aebersold R, Burlingame AL, Bradshaw RA. Western blots versus selected reaction monitoring assays: time to turn the tables? Molecular & Cellular Proteomics : McP. 12: 2381-2. PMID 23756428 DOI: 10.1074/Mcp.E113.031658  1
2013 Schubert OT, Mouritsen J, Ludwig C, Röst HL, Rosenberger G, Arthur PK, Claassen M, Campbell DS, Sun Z, Farrah T, Gengenbacher M, Maiolica A, Kaufmann SH, Moritz RL, Aebersold R. The Mtb proteome library: a resource of assays to quantify the complete proteome of Mycobacterium tuberculosis. Cell Host & Microbe. 13: 602-12. PMID 23684311 DOI: 10.1016/J.Chom.2013.04.008  1
2013 Varjosalo M, Keskitalo S, Van Drogen A, Nurkkala H, Vichalkovski A, Aebersold R, Gstaiger M. The protein interaction landscape of the human CMGC kinase group. Cell Reports. 3: 1306-20. PMID 23602568 DOI: 10.1016/J.Celrep.2013.03.027  1
2013 Templeton AJ, Dutoit V, Cathomas R, Rothermundt C, Bärtschi D, Dröge C, Gautschi O, Borner M, Fechter E, Stenner F, Winterhalder R, Müller B, Schiess R, Wild PJ, Rüschoff JH, ... ... Aebersold R, et al. Phase 2 trial of single-agent everolimus in chemotherapy-naive patients with castration-resistant prostate cancer (SAKK 08/08). European Urology. 64: 150-8. PMID 23582881 DOI: 10.1016/J.Eururo.2013.03.040  1
2013 Zampar GG, Kümmel A, Ewald J, Jol S, Niebel B, Picotti P, Aebersold R, Sauer U, Zamboni N, Heinemann M. Temporal system-level organization of the switch from glycolytic to gluconeogenic operation in yeast. Molecular Systems Biology. 9: 651. PMID 23549479 DOI: 10.1038/Msb.2013.11  1
2013 Gstaiger M, Aebersold R. Genotype-phenotype relationships in light of a modular protein interaction landscape. Molecular Biosystems. 9: 1064-7. PMID 23529396 DOI: 10.1039/C3Mb25583B  1
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